BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00018946
         (1093 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010647534.1| PREDICTED: uncharacterized protein LOC104878...   103   1e-21
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   103   2e-20
ref|XP_010647148.1| PREDICTED: uncharacterized protein LOC104878...   102   3e-20
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    91   2e-19
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    97   2e-18
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    97   2e-18
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...    84   1e-17
ref|XP_010270024.1| PREDICTED: uncharacterized protein LOC104606...    86   4e-16
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    80   2e-15
ref|XP_015638276.1| PREDICTED: uncharacterized protein LOC433939...    85   9e-15
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    78   9e-15
gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]      83   2e-14
ref|XP_015696425.1| PREDICTED: uncharacterized protein LOC107304...    84   2e-14
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    85   2e-14
ref|XP_015696274.1| PREDICTED: uncharacterized protein LOC107304...    84   5e-14
ref|XP_010253823.1| PREDICTED: uncharacterized protein LOC104594...    75   1e-13
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                 83   1e-13
ref|XP_010258411.1| PREDICTED: uncharacterized protein LOC104598...    82   1e-13
gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposo...    69   3e-13
ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695, p...    79   9e-13

>ref|XP_010647534.1| PREDICTED: uncharacterized protein LOC104878637 [Vitis vinifera]
          Length = 334

 Score =  103 bits (257), Expect = 1e-21
 Identities = 80/287 (27%), Positives = 114/287 (39%), Gaps = 25/287 (8%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           EVW  +  NF SQ++AK++ Y+ Q+Q LK    +MRDYL K+K+ CDLL  AG +     
Sbjct: 49  EVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTD 108

Query: 323 KSCISYLDL-DQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNL 499
                   L D+  ++   +S +    +L  + T    + E R+      ++ + L VN 
Sbjct: 109 HILAIMQGLGDEYESVIAVISSKKSSPSLQYV-TSTLIAHEGRIAH---KISSNDLSVNY 164

Query: 500 ATQSQNXXXXXXXXXXXXXXYSHTPNGKRG-----RGNLRSGNMRGRDERYNG-KPRCQI 661
            +Q  N                     + G     RG+      RGR     G KP+CQ+
Sbjct: 165 TSQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRGRGRGRAQGGIKPQCQL 224

Query: 662 CDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGS- 838
           C+   H   +CFY  D NF                                     D   
Sbjct: 225 CNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQE 284

Query: 839 -----------------QDMCWYPDSGATNHVTYDLSNLNLAADYQG 928
                            Q+ CW+PDSGATNHVT+DL NLN  A+Y G
Sbjct: 285 NQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNG 331


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  103 bits (256), Expect = 2e-20
 Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 6/280 (2%)
 Frame = +2

Query: 149 WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SK- 325
           W  L+  F+S + A+I+Q RL+LQ+ K GS SM DY+ K+K   D L A G       + 
Sbjct: 121 WNALESIFSSSSRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQV 180

Query: 326 -SCISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLA 502
            + +  L  D +  +     R D I +L  +H++   +FE+RLE      +  Q+  N A
Sbjct: 181 MNLLGGLGSDYNAVVTAINIRDDKI-SLEAIHSM-LLAFEHRLEQQS---SIEQMSANYA 235

Query: 503 TQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNG----KPRCQICDY 670
           + S N              YS   N    RG  R G   G+  R N     KP+CQ+C  
Sbjct: 236 SSSNNRGGGRKFNGGRGQGYSPNNNNYTYRGRGRGGR-NGQGGRQNSSPSEKPQCQLCGK 294

Query: 671 SNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQDMC 850
             H A  C++  D++F                                     +   D  
Sbjct: 295 FGHTAQICYHRFDISF----------QGGQTTISHSLNNGNQNNIPAMVASASNNPADES 344

Query: 851 WYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
           WY DSGA++H+T +L NL   + Y G +KV IGNG  L I
Sbjct: 345 WYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSI 384


>ref|XP_010647148.1| PREDICTED: uncharacterized protein LOC104878438 [Vitis vinifera]
          Length = 910

 Score =  102 bits (254), Expect = 3e-20
 Identities = 83/306 (27%), Positives = 117/306 (38%), Gaps = 38/306 (12%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           EVW  +  NF SQ++AK++ Y+ Q+Q LK    +MRDYL K+K+ CDLL  AG +     
Sbjct: 100 EVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGNK----- 154

Query: 323 KSCISYLDLDQSITLFLPLSRQDLIETLS----------VMHTLCFFS--FENRLESTEG 466
              IS  D   +I   L    + +I  +S          V  TL        +++ ST+ 
Sbjct: 155 ---ISDTDHILAIMQGLGEEYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISSTDL 211

Query: 467 NLNGSQLLVNLATQSQNXXXXXXXXXXXXXXY--------SHTPNGKRGRGNLRSGNMRG 622
           ++N +    N  + S N              +        S  PN  R RG  + G    
Sbjct: 212 SVNYTSQYSNRGSSSWNSNGYPSSGFQNRNQFGGNQMTRGSFVPNRGRSRGRTQGGI--- 268

Query: 623 RDERYNGKPRCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXX 802
                  KP+CQ+C+   H   +CFY  D NF                            
Sbjct: 269 -------KPQCQLCNKFGHTVHRCFYRYDPNFHRNMPANGPTPCVLGSGAKNGASGSNSS 321

Query: 803 XXXXXXXXXDGSQDM------------------CWYPDSGATNHVTYDLSNLNLAADYQG 928
                    D  +D                   CW+PDSGATNHVT+DL NLN   +Y  
Sbjct: 322 AGNVNLTEYDAQEDQDYSEMEAMVATPEDFQNCCWFPDSGATNHVTHDLGNLNSGTEYNA 381

Query: 929 NEKVQI 946
               Q+
Sbjct: 382 QSSHQL 387


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 91.3 bits (225), Expect(2) = 2e-19
 Identities = 80/299 (26%), Positives = 123/299 (41%), Gaps = 23/299 (7%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           +VWK L+  FA+Q  AK+ Q++ QL   K G  S+ DYL K+++  DLL   G +     
Sbjct: 107 QVWKTLELYFATQVRAKVTQFKTQLHNTKKGDLSISDYLLKIRNVVDLLALVGHK----- 161

Query: 323 KSCISYLDLDQSITLFLPLSRQD-LIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNL 499
              IS  D   +I   LP   +  +I   S +        E  L + E  +  +  + + 
Sbjct: 162 ---ISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEIEALLLAQESRIEKNIKIADF 218

Query: 500 ATQSQNXXXXXXXXXXXXXXY------------SHTPNG---------KRGRGNLRSGNM 616
           +T S                Y            +H+ NG         ++GRG    G+ 
Sbjct: 219 STPSLAHLITTNRNGSPHFNYRASTRNSNFRPPTHSGNGMQHFRGNFTQQGRGRHGRGSW 278

Query: 617 RGRDERYNGKPRCQICDYSNHKASKCFYMCDLNFT-PXXXXXXXXXXXXXXXXXXXXXXX 793
           +G     N KP+CQ+C    H   +C+Y  D +FT P                       
Sbjct: 279 KG-----NNKPQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXF 333

Query: 794 XXXXXXXXXXXXDGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
                       +  QD  WYPDSGAT+H+T +L+NL   + +  +++V +GNG  L I
Sbjct: 334 FPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPI 392



 Score = 33.5 bits (75), Expect(2) = 2e-19
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = +1

Query: 955  HMFDDTHFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFA 1089
            H    T F  S +  P K      LK+L+HVP+IT NL+ VS+FA
Sbjct: 393  HHIGHTSFSSSFI--PSKT---LALKQLLHVPEITKNLLSVSKFA 432


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 81/284 (28%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
 Frame = +2

Query: 149  WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SK- 325
            W  L+  F+S + A+I+Q RL+LQ+ K GS SM DY+ KVK   D L A G       + 
Sbjct: 963  WNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQDQV 1022

Query: 326  -SCISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLA 502
             + +  L  D +  +     R D I ++  +H++   +FE+RLE        S +  N A
Sbjct: 1023 MNLLGGLGSDYNAVVTAINIRDDKI-SIEAVHSM-LLAFEHRLEQQSSIKQFSPISANYA 1080

Query: 503  TQSQNXXXXXXXXXXXXXXYSHTPN----GKRGRGNLRSGNMRGRDERYNG----KPRCQ 658
            + S N               +HTPN      RG G    G   G++ R+N     KP+CQ
Sbjct: 1081 SSSNN--RGGGRRYNGGRGQNHTPNISNYTYRGCGR---GGRYGQNGRHNSNSSEKPQCQ 1135

Query: 659  ICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGS 838
            +C    H    C++  D+++                                     +  
Sbjct: 1136 LCGKFGHTVQICYHRFDISY-----------QSSQSSNTSPSNAGNPNSIPAMVASSNNL 1184

Query: 839  QDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
             D  WY DSGA++H+T  + NL  ++ Y G +KV IGNG  L I
Sbjct: 1185 ADDTWYLDSGASHHLTQSVGNLTSSSPYTGIDKVTIGNGKHLSI 1228


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 10/284 (3%)
 Frame = +2

Query: 149 WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SK- 325
           W  L+  F+S + A+I+Q RL+LQ+ K GS SM DY+ KVK   D L A G       + 
Sbjct: 14  WNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQDQV 73

Query: 326 -SCISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLA 502
            + +  L  D +  +     + D I ++ V+H++   +FE+RLE        S +  N A
Sbjct: 74  MNLLGGLGSDYNAVVTAINIKDDKI-SIEVVHSM-LLAFEHRLEQQSSIEQFSSISANYA 131

Query: 503 TQSQNXXXXXXXXXXXXXXYSHTPN----GKRGRGNLRSGNMRGRDERYNG----KPRCQ 658
           + S +               +HTPN      RGRG    G   G++ R+N     KP+CQ
Sbjct: 132 SSSNS--RGSGRRYNGGRGQNHTPNISNYTYRGRGR---GGRYGQNGRHNSNSSEKPQCQ 186

Query: 659 ICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGS 838
           +C    H    C++  D+++                                     +  
Sbjct: 187 LCGKFGHTVQICYHKFDISY-----------QSSQSSNTSPSNASNPNSIPAMVASSNNL 235

Query: 839 QDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
            +  WY DSGA +H+T  + NL  ++ Y G +KV IGNG  L I
Sbjct: 236 AEDTWYLDSGANHHLTQSVGNLTSSSPYTGIDKVTIGNGKHLSI 279


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1403

 Score = 84.3 bits (207), Expect(2) = 1e-17
 Identities = 80/287 (27%), Positives = 119/287 (41%), Gaps = 11/287 (3%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           ++W  L+  FASQ  A++ Q ++QL+ +K  + ++  YL ++K   + L A G+   +  
Sbjct: 108 QIWNNLEIYFASQTKARVKQLKIQLRGIKK-TTAINQYLLEIKKIVNNLAAIGSPLNTAE 166

Query: 323 KSCISYLDL----DQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLL 490
                +  L    D  IT  L  + +  +E +  +      + E RLE  + +     L 
Sbjct: 167 HIDAIFDGLSEEYDPFITSVLTRTEEYSVEQIESL----LMAQEERLEKHKAS-ESVPLQ 221

Query: 491 VNLATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNG---KPRCQI 661
            NLA  S N                   NG  GRG  R G  RGR  ++ G   K  CQ+
Sbjct: 222 ANLAQGSFNSRKQFTNQGR-----GSNNNGTHGRGPHR-GRGRGRSAQHFGRGNKQPCQV 275

Query: 662 CDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQ 841
           C    H A  C++  D  +T                                     GSQ
Sbjct: 276 CGKIGHIAFHCWHRYDQQYTEPNLNHNTNVYNPGNQQQMQAMIA-------------GSQ 322

Query: 842 DMC----WYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
           +M     WYPDSGATNH+T DL+NL    DY G +K+ +GNG  + I
Sbjct: 323 NMVYDDQWYPDSGATNHLTSDLNNLGSKTDYTGQDKIHMGNGQAIGI 369



 Score = 34.7 bits (78), Expect(2) = 1e-17
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +1

Query: 973  HFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFAR 1092
            H G S    P   +  F LK+L+HVP IT NL+ VS+F +
Sbjct: 371  HTGTSFFHTPMS-SKIFTLKELLHVPHITKNLLSVSKFCK 409


>ref|XP_010270024.1| PREDICTED: uncharacterized protein LOC104606492 [Nelumbo nucifera]
          Length = 253

 Score = 85.5 bits (210), Expect(2) = 4e-16
 Identities = 79/258 (30%), Positives = 102/258 (39%), Gaps = 12/258 (4%)
 Frame = +2

Query: 233 GSESMRDYLNKVKSCCDLLTAAGTR*KS*SKSCISYL------DLDQSITLFLPLSRQDL 394
           GS+SM DYL +VK   D L A G    S     I Y       D D  IT     ++ D 
Sbjct: 9   GSKSMADYLQQVKGYTDALEATGQGLSS--NDIILYTTGGLGPDYDPLITAIT--TKHDP 64

Query: 395 IETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLATQSQNXXXXXXXXXXXXXXYSHTP 574
           + +L  +H+L    FE  L      L  +QL  N                      +  P
Sbjct: 65  L-SLEELHSL-LHQFELCLNRQHSTLTDTQLSSNSVVHKPG---------------ARPP 107

Query: 575 NGKRGRGNLRSGNMRGRDERYNG------KPRCQICDYSNHKASKCFYMCDLNFTPXXXX 736
           N  RG    R G  +GR   YN       K  CQ+ D   H A  CF+  DL+F      
Sbjct: 108 NSHRGG---RGGRGKGR---YNNTTPSQPKVTCQVYDKVGHSALSCFHRFDLSFQASRGN 161

Query: 737 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQDMCWYPDSGATNHVTYDLSNLNLAA 916
                                            S D  WYP++GATNH+T DL NL+L +
Sbjct: 162 PPSKVPVASNTLE--------------------SSDGDWYPNTGATNHLTVDLGNLSLRS 201

Query: 917 DYQGNEKVQIGNGTCLMI 970
           +Y GN+K+ +GNGTCL I
Sbjct: 202 NYNGNDKIAVGNGTCLDI 219



 Score = 28.1 bits (61), Expect(2) = 4e-16
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 1027 LKKLMHVPDIT*NLIGV 1077
            LK ++HVPDIT NLI V
Sbjct: 236  LKNILHVPDITKNLISV 252


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 80.5 bits (197), Expect(2) = 2e-15
 Identities = 48/146 (32%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
 Frame = +2

Query: 590 RGNLRSGNMRGRDERYNG-KPRCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXX 766
           RG+      RGR     G KP+CQ+C+   H   +CFY  D NF                
Sbjct: 161 RGSFVHNRGRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGS 220

Query: 767 XXXXXXXXXXXXXXXXXXXXXDGS------------------QDMCWYPDSGATNHVTYD 892
                                D                    Q+ CW+PDSGATNHVT+D
Sbjct: 221 GARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHD 280

Query: 893 LSNLNLAADYQGNEKVQIGNGTCLMI 970
           L NLN  A+Y GN K+ +GNGT L I
Sbjct: 281 LGNLNSGAEYNGNSKIHMGNGTGLKI 306



 Score = 30.8 bits (68), Expect(2) = 2e-15
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 970  THFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFAR 1092
            +H G S+  +    N    LK ++ VP I  N + VSQF R
Sbjct: 307  SHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNXLSVSQFXR 347


>ref|XP_015638276.1| PREDICTED: uncharacterized protein LOC4339390 [Oryza sativa
           Japonica Group] gi|113579660|dbj|BAF18023.1|
           Os05g0527300 [Oryza sativa Japonica Group]
           gi|215697357|dbj|BAG91351.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 363

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 13/282 (4%)
 Frame = +2

Query: 149 WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SKS 328
           W+ L+  ++S   A+ I  R+ L   K G+ S+ +Y++K+K+  D +TAAG         
Sbjct: 113 WQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALADEMTAAG--------K 164

Query: 329 CISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNL---NGSQLLVNL 499
            +   DL   I   L  + + +I T+    T+      ++L S E  L   +G    VNL
Sbjct: 165 IVDDDDLISYIIAGLDDTYEPVISTIVGKDTMTLGEAYSQLLSFEQRLALRHGGDSSVNL 224

Query: 500 ATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNG----------KP 649
           A + +                 +T NG RGRG   +G  RGR    NG          +P
Sbjct: 225 ANRGRGGGGGQQRG-------GNTGNGGRGRGGNNNGANRGRGRGNNGGARPPGGVDNRP 277

Query: 650 RCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 829
           +CQ+C    H    C+Y  D +F P                                   
Sbjct: 278 KCQLCYKRGHTVINCWYRYDEDFVPDEKYAGSATSYGI---------------------- 315

Query: 830 DGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNG 955
               D  WY D+ AT+HVT +L  L +   Y+G ++V   +G
Sbjct: 316 ----DTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASG 353


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 78.2 bits (191), Expect(2) = 9e-15
 Identities = 72/292 (24%), Positives = 109/292 (37%), Gaps = 16/292 (5%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           + W  +   F SQ  A+ +  RL LQT   G+ S+ +Y  K+K+  D + A G R     
Sbjct: 65  KAWGAIGSMFTSQTRARSLNTRLALQTTVKGTMSVSEYFGKMKALADEVAATGKRLDE-- 122

Query: 323 KSCISYL--DLDQSITLFLPLSRQDLIETLSVMHTLC-FFSFENRLESTEGNLNGSQLLV 493
           +  I+Y+   LD      +        E +SVM       +FENRL+  +     +    
Sbjct: 123 EDFIAYILNGLDGEFDSVVSAIGMKT-EPISVMEVYSQVLNFENRLKLRQEGTASAHAAS 181

Query: 494 N--------LATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRS-----GNMRGRDER 634
                        S                 ++ P G  G GN R         RG  +R
Sbjct: 182 RGRGGFNPRAGGFSGGGGGGPGRGRGAPTGGANFPGGNGGGGNSRGRGYTPARNRGNQQR 241

Query: 635 YNGKPRCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 814
            + +P CQ+C    H A+KC++  D N+ P                              
Sbjct: 242 VDPRPICQVCYKRGHVAAKCWHRFDENYVPDERHVAAAAQAAY----------------- 284

Query: 815 XXXXXDGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
                  + D  WY DSGAT+H+T +L  L +   Y+G EK+   NG  + I
Sbjct: 285 -------AVDTNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQI 329



 Score = 30.8 bits (68), Expect(2) = 9e-15
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 973  HFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFA 1089
            H G +LV  P   N    LK ++HVP  T NLI  S+ A
Sbjct: 331  HIGHALVHTPD--NHTLHLKNVLHVPHATKNLISASRLA 367


>gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 307

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 80/280 (28%), Positives = 119/280 (42%), Gaps = 8/280 (2%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           EVW+ ++  FASQ+ A+II  R+ L + K G+ ++ +Y+ K+KS  D +++A  R     
Sbjct: 68  EVWEAIENLFASQSRARIINIRMALSSTKKGTRTIAEYVGKMKSLADDMSSA--RKPLDD 125

Query: 323 KSCISY----LDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLL 490
           +  +SY    LD D +  +     R D I T+S  + L    FE+RLE  +G+   S  L
Sbjct: 126 EELVSYIFAGLDFDYNSVVSSIAGRADSI-TMSEAYAL-LVGFESRLELLQGS---SSAL 180

Query: 491 VNLATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNL--RSGNMRGRDERYNGKPR--CQ 658
            N  ++                       G RG+G    R G  RGR +   GKPR  CQ
Sbjct: 181 ANSVSRGGR-------------------GGGRGQGGNPGRGGFGRGRGD---GKPRPTCQ 218

Query: 659 ICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGS 838
           +C    H   KC+   D +FT                                      S
Sbjct: 219 LCGKIGHTVIKCWKCFDHSFT------------------------GEEKNANVAASSSYS 254

Query: 839 QDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGT 958
            D  WY DS AT+H+T ++  L +   Y  NE+V   +GT
Sbjct: 255 VDTNWYVDSSATDHITGEMEKLAVKDKYTSNEQVHTASGT 294


>ref|XP_015696425.1| PREDICTED: uncharacterized protein LOC107304908 [Oryza brachyantha]
          Length = 357

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 78/281 (27%), Positives = 113/281 (40%), Gaps = 10/281 (3%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           EVW  ++  FA Q+ A++I  R+ L +   G++++  Y  K+KS  D + +AG       
Sbjct: 109 EVWTAIQELFAGQSRARVINTRMALSSTVKGNQTVAQYFGKMKSLADEMASAGKPLDD-- 166

Query: 323 KSCISY----LDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLL 490
           +  +SY    LD D +  +     R + I T S ++ L    FENRLE          LL
Sbjct: 167 EDLVSYVLAGLDFDYNPVVSSVAGRSEPI-TPSELYAL-LVGFENRLE----------LL 214

Query: 491 VNLATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDE----RYNGKPR-- 652
            N +  S N                 T  G+ GRG  R    RG       R +GKPR  
Sbjct: 215 QNTSQSSANSVSRGGGRGG-------TGGGRDGRGRGRGNGGRGGHGNPGGRNDGKPRPT 267

Query: 653 CQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 832
           CQ+C    H  +KC+   D +FT                                     
Sbjct: 268 CQLCGKIGHVVAKCWKRFDTSFT-------------------------GDEKIVNTATNS 302

Query: 833 GSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNG 955
              D  WY D+GAT+H+T +L  L +   Y GNE+V   +G
Sbjct: 303 YGVDANWYVDTGATDHITGELEKLTIKDKYNGNEQVHTASG 343


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 73/287 (25%), Positives = 114/287 (39%), Gaps = 13/287 (4%)
 Frame = +2

Query: 149 WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SKS 328
           W+ L+  ++S   A+ I  R+ L   K G+ S+ +Y++K+K+  D +TAAG         
Sbjct: 113 WQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALADEMTAAG--------K 164

Query: 329 CISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNL---NGSQLLVNL 499
            +   DL   I   L  + + +I T+    T+      ++L S E  L   +G    VNL
Sbjct: 165 IVDDDDLISYIIAGLDDTYEPVISTIVGKDTMTLGEAYSQLLSFEQRLALRHGGDSSVNL 224

Query: 500 ATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNG----------KP 649
           A + +                 +T NG RGRG   +G  RGR    NG          +P
Sbjct: 225 ANRGRGGGGGQQRG-------GNTGNGGRGRGGNNNGANRGRGRGNNGGARPPGGVDNRP 277

Query: 650 RCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 829
           +CQ+C    H    C+Y  D +F P                                   
Sbjct: 278 KCQLCYKRGHTVINCWYRYDEDFVPDEKYAGSATSYGI---------------------- 315

Query: 830 DGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
               D  WY D+ AT+HVT +L  L +   Y+G ++V   +G  + I
Sbjct: 316 ----DTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEI 358


>ref|XP_015696274.1| PREDICTED: uncharacterized protein LOC107304875 [Oryza brachyantha]
          Length = 885

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 79/281 (28%), Positives = 111/281 (39%), Gaps = 10/281 (3%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           + WK+++  F+S   A+ I  RL L TLK G  S+  Y  K+K+  D +TA  T      
Sbjct: 109 DAWKFVESLFSSMTRARSINTRLSLATLKKGDMSITTYFGKMKALADEMTA--TSKVVDD 166

Query: 323 KSCISYL--DLDQSITLFLPLSRQDL--IETLSVMHTLC-FFSFENRLESTEGNLNGSQL 487
              ISY+   LD     F P+    +  +  +SV   L    SFE R     G    S  
Sbjct: 167 DDLISYIVAGLDDD---FEPVVSNIVGRLYPISVGEALAQLLSFEQRQSLRHGGEGSS-- 221

Query: 488 LVNLAT-----QSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNGKPR 652
            VN A+     Q Q                ++  N  +GRG   SG  RG     + +P+
Sbjct: 222 -VNSASRGRGYQQQRGRNNGARGRGHFTTNNNASNQGQGRGRGNSGG-RGNGAYNDNRPK 279

Query: 653 CQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 832
           CQ+C    H    C+YM D NF P                                    
Sbjct: 280 CQLCYKRGHTVRDCWYMFDENFVPDERFAGSVASY------------------------- 314

Query: 833 GSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNG 955
            S D  WY D+GAT+HVT +L  L     Y G++++Q  +G
Sbjct: 315 -SVDNNWYIDTGATDHVTRELEKLTTREKYNGSDQIQTASG 354


>ref|XP_010253823.1| PREDICTED: uncharacterized protein LOC104594965 [Nelumbo nucifera]
          Length = 348

 Score = 75.5 bits (184), Expect(2) = 1e-13
 Identities = 71/276 (25%), Positives = 106/276 (38%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           +VW  L+  +A ++ A+I Q R  L  +K   +SM  YL K+K+  + L AAG+      
Sbjct: 81  DVWCVLENLYAFKSKAQITQLRNLLLLVKKDGDSMHAYLQKIKNVNNSLAAAGS------ 134

Query: 323 KSCISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLA 502
                            PLS  D      + H     + E R+ES   +L+       L+
Sbjct: 135 -----------------PLSDSD------ITHHALLINQEIRIESPMQSLSSFPSANYLS 171

Query: 503 TQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNGKPRCQICDYSNHK 682
           T S                   +P  ++   + +  +  G+  +Y   P CQIC   NH 
Sbjct: 172 TNS-------------------SPKPRQFEKDSKDSSNTGKS-KYANNP-CQICGGCNHL 210

Query: 683 ASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQDMCWYPD 862
              C +  + +F P                                      +D CWYPD
Sbjct: 211 TFWCCHRYNQHFKPKSKKTAAPNDSALAEYNTSLNA--------------SDEDDCWYPD 256

Query: 863 SGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
            GATNH+T DLS L L + Y G ++V +GNG  L I
Sbjct: 257 FGATNHITSDLSKLQLHSKYTGLDQVTVGNGEGLAI 292



 Score = 30.0 bits (66), Expect(2) = 1e-13
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 970  THFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFA 1089
            +H G S + +  +     LLK ++HVP+I  NL+ V+QF+
Sbjct: 293  SHTGSSTISSASRS---LLLKNILHVPNIQKNLLFVAQFS 329


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 12/288 (4%)
 Frame = +2

Query: 143 EVWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*S 322
           E WK L   F S+  A+ +  RL L TL+ G+ S+ +Y+ K+K+  D + AAG       
Sbjct: 246 EAWKTLDDMFTSRTRARSLNVRLALTTLQKGNSSISEYIGKMKTLADEVAAAGKPLDD-- 303

Query: 323 KSCISY----LDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLL 490
           +  I+Y    LD D    +   + R + +    V   L   SFENRL   +     +Q  
Sbjct: 304 EELIAYILNGLDEDFDSVVSTIVGRVEPVTVAEVYSQL--LSFENRLAMRQ-----AQAT 356

Query: 491 VNLATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRS-----GNMRGRDER---YNGK 646
            N+A +                      N  RGRG  R      G  RG +++   Y+ +
Sbjct: 357 ANMANRGGRGGGGSRGGGA---------NPGRGRGATRGRGAAPGRGRGNNQQQRSYDNR 407

Query: 647 PRCQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 826
           P CQ+C    H A+ C++  D +F P                                  
Sbjct: 408 PLCQVCYKRGHVAADCWHRFDEDFVPDDKLVAAAIHTH---------------------- 445

Query: 827 XDGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMI 970
              ++D  WY D+GAT+H+T +L  L     Y+G++++   +G+ + I
Sbjct: 446 ---ARDSNWYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSGMEI 490


>ref|XP_010258411.1| PREDICTED: uncharacterized protein LOC104598178 [Nelumbo nucifera]
          Length = 598

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 78/302 (25%), Positives = 123/302 (40%), Gaps = 5/302 (1%)
 Frame = +2

Query: 146  VWKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SK 325
            VW  L+  +AS++  +++Q   +L+  K G+ S+  YL KVK+  D L A G        
Sbjct: 25   VWIILEQLYASKSRVRVMQLHFELRCFKKGALSVPQYLQKVKNLTDNLIATGEPLFDTDY 84

Query: 326  --SCISYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFE-NRLESTEGNLNGSQLLVN 496
              + +S LDL+    +    +R D      V   L        +++ + G+L+ +  + N
Sbjct: 85   ILTILSGLDLEYESFITAVTTRVDAYTVEDVKGMLLNQKIRLGQIKGSHGSLDSNYPVAN 144

Query: 497  LATQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNMRGRDERYNGKP--RCQICDY 670
            +A +                      N      N   GN   +    + KP  +CQIC  
Sbjct: 145  MAVRGNANF-----------------NNINDSHNFSKGN---KSYPQSSKPQYKCQICWG 184

Query: 671  SNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQDMC 850
             NH A KC Y  D NF                                     D S    
Sbjct: 185  KNHSAFKCKYKFDRNFE---------------------RENFKQQKQAFHVSTDSSCGEA 223

Query: 851  WYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCLMILILVDL*LKPLANSIPISSL 1030
            WYPDSGA NH+T DL+NLN+ ++Y G ++++I NG+        D   + L+ S+ + +L
Sbjct: 224  WYPDSGAMNHLTADLANLNVHSEYTGPDQLRIRNGS--------DTEPEALSFSLKLKTL 275

Query: 1031 KS 1036
            KS
Sbjct: 276  KS 277


>gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 533

 Score = 69.3 bits (168), Expect(2) = 3e-13
 Identities = 47/139 (33%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
 Frame = +2

Query: 575 NGKRGRGNLRSGNMRGRDERYNG---KPRCQICDYSNHKASKCFYMCDLNFTPXXXXXXX 745
           NG  GRG  R G  RGR  ++ G   K  CQ+C    H A  C++  D  +T        
Sbjct: 111 NGTHGRGPHR-GRGRGRSAQHFGRGNKQPCQVCGKIGHIAFHCWHRYDQQYTEPNLNHNT 169

Query: 746 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSQDMC----WYPDSGATNHVTYDLSNLNLA 913
                                        GSQ+M     WYPDSGATNH+T DL+NL   
Sbjct: 170 NVYNPGNQQQMQAMIA-------------GSQNMVYDDQWYPDSGATNHLTSDLNNLGSK 216

Query: 914 ADYQGNEKVQIGNGTCLMI 970
            DY G +K+ +GNG  + I
Sbjct: 217 TDYTGQDKIHMGNGQAIGI 235



 Score = 34.7 bits (78), Expect(2) = 3e-13
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +1

Query: 973  HFGRSLVKAPGKFNSYFLLKKLMHVPDIT*NLIGVSQFAR 1092
            H G S    P   +  F LK+L+HVP IT NL+ VS+F +
Sbjct: 237  HTGTSFFHTPMS-SKIFTLKELLHVPHITKNLLSVSKFCK 275


>ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695, partial [Sorghum
           bicolor]
          Length = 438

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 76/285 (26%), Positives = 109/285 (38%), Gaps = 13/285 (4%)
 Frame = +2

Query: 149 WKWLKPNFASQNAAKIIQYRLQLQTLKTGSESMRDYLNKVKSCCDLLTAAGTR*KS*SK- 325
           W  ++  FASQ+ A++I  R+ L T   G+ S+ +Y  K+K   D + +AG + +     
Sbjct: 116 WAAIERLFASQSRARVISTRMALATASKGASSIAEYYGKMKGLADEMASAGRKLEDEELV 175

Query: 326 SCI-SYLDLDQSITLFLPLSRQDLIETLSVMHTLCFFSFENRLESTEGNLNGSQLLVNLA 502
           SCI + LD D    +    +R + I    +   L   S E R+E   G   G Q   NLA
Sbjct: 176 SCILTGLDADYDPVVTAVTARVEPISVAELYAQLV--SHEQRMEIRGGG-GGHQSSANLA 232

Query: 503 TQSQNXXXXXXXXXXXXXXYSHTPNGKRGRGNLRSGNM---RGRDERYNGKPR------- 652
           ++                      NG RG  N RS N    RG   R  G  R       
Sbjct: 233 SRGGRHNNGGYRGGGGRN------NGARGGYNNRSNNYNNNRGSGGRGGGGRRVPFQPGM 286

Query: 653 -CQICDYSNHKASKCFYMCDLNFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 829
            CQIC    H A  CF   D ++TP                                   
Sbjct: 287 FCQICTKEGHSAFDCFKRHDASYTPPQKSASAATSSHY---------------------- 324

Query: 830 DGSQDMCWYPDSGATNHVTYDLSNLNLAADYQGNEKVQIGNGTCL 964
               D  WY D+G T+H+T +L  L +   Y G ++V   NG+ +
Sbjct: 325 --GVDSNWYMDTGVTDHITSELDKLTVRDKYHGGDQVHTANGSAV 367