BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00015398
         (1731 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP09717.1| unnamed protein product [Coffea canephora]            290   8e-87
emb|CDP14470.1| unnamed protein product [Coffea canephora]            278   6e-82
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A...   234   8e-64
ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein A...   231   3e-63
ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein A...   223   3e-62
ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413...   232   5e-62
ref|XP_008340321.1| PREDICTED: putative ribonuclease H protein A...   221   2e-61
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A...   218   3e-61
ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein A...   223   8e-61
ref|XP_009123721.1| PREDICTED: putative ribonuclease H protein A...   221   1e-60
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...   223   4e-60
ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein A...   219   5e-60
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...   218   5e-60
ref|XP_009113015.1| PREDICTED: putative ribonuclease H protein A...   221   6e-60
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...   222   1e-59
ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein A...   222   1e-59
ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355...   223   7e-59
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise...   221   2e-58
ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...   221   2e-58
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...   215   2e-58

>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score =  290 bits (742), Expect = 8e-87
 Identities = 165/537 (30%), Positives = 266/537 (49%), Gaps = 4/537 (0%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP  +C+ ++ + + +WWG ++ +++ +HW  W +LA  K+ GGLGFR+ Q+FN +L+
Sbjct: 62   FKLPNKLCKEVTSIFANYWWGESEGRNK-MHWCSWGRLARDKKEGGLGFRELQNFNKALL 120

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AKQ+WRV+S+P LL+SK+++ +YF    +   K     SW+W+  M  +  +  G R  +
Sbjct: 121  AKQVWRVISKPNLLVSKVLRAKYFHKESIFKCKIPKCASWIWQSLMNVRDFVRKGTRRKI 180

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G GK   IWE  WIP         V  +   + RV EL+   G  W+  LV  +F   DA
Sbjct: 181  GNGKATNIWEDNWIPGNKDGKVTTVMPQSCNIRRVEELI--SGFRWRIPLVSRIFNRKDA 238

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGN---XXXX 714
            + IL IP+   G +D   W H+    +TV+S Y  + Q     KG  D   G        
Sbjct: 239  KEILDIPISIAGREDSNYWLHSGSGTYTVNSGYKALCQETSQHKGRRDNEAGTSSANSNE 298

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      +K+K+KHFIWR +  LLP    +  +  + D IC  CG + E+ EH+FF 
Sbjct: 299  KQWKWLWKLKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQ 358

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTRN 1074
            C RA +VWK+AP+ W+           WW  +   T      + + ++V ILW +WK RN
Sbjct: 359  CSRAQEVWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRN 418

Query: 1075 LWRFQNVLMPEKEIVEFATKEWLEYNSV-RSKDDQHFKNPGIYHTSPYLNPDVAKDVGQF 1251
             W+F        E ++ A +EW E  S  R +     +      T+     +  +D  Q 
Sbjct: 419  EWKFNAKRRHPWESIKKALQEWQEQASAWREEKSTPVEAERDRETAE--TDEGGRDEMQI 476

Query: 1252 YILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCSGSPVEVLLLAIREGQLMAYKEK 1431
             +   VQ Q N+  G GI+  N    ++ +W  +   +GS ++    A++   + A + +
Sbjct: 477  RLSTHVQEQTNR-VGTGIIATNFNHQLVSAWALTDRYAGSHLQTSAEAVKMAIIKARQLQ 535

Query: 1432 WKRIIFLLEDESLVTILNGGQCSALESSSTAEDIFLFKNLFDCCLFQLSDNLRNLDS 1602
            W++I   L    L+ ++  G    ++ ++  +DI   + LF  C F L    RNLDS
Sbjct: 536  WQKITVHLLSPQLLKMITNGLAKDIKMATLTDDINSLRALFQKCSFCLD---RNLDS 589


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  278 bits (712), Expect = 6e-82
 Identities = 163/550 (29%), Positives = 265/550 (48%), Gaps = 23/550 (4%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            VF+LP  +C+ +S L + +WWG  + K++ +HW  W K++ S+  GGLGF+D + +N +L
Sbjct: 103  VFKLPRKLCKDISALMANYWWGEANGKNK-LHWLSWRKMSLSRNAGGLGFKDIEAYNKAL 161

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++++P LL+SK+++ RYFP   + + +P    SW+W+G + A++V+E G+   
Sbjct: 162  LGKQVWRILTKPNLLISKVLRARYFPKDSILTCRPKQNASWIWQGLLGARRVVEKGVIRR 221

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G+   IW   WIP   S  P  +  +   +  V EL+ +    WK   + + F  +D
Sbjct: 222  IGNGRSTSIWGHRWIPGSSSGRPTSLGPQSYNLKMVNELISH--HRWKRNTIFQHFNQSD 279

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLK------GDPDTSDGN 702
            AE IL IPL   G +D   W H     +TVSS Y  + + R  +K        P  +  +
Sbjct: 280  AEKILNIPLSLMGREDNYYWQHNPGGIYTVSSGYKCIMKERTNVKQIAPEEAGPSITGED 339

Query: 703  XXXXXXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEH 882
                         NIK+K+K FIW+C+   LP  A +  K    D +C  CG + ET EH
Sbjct: 340  QQSRQMWTTLWKLNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEH 399

Query: 883  IFFHCPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLW 1062
            +  +C  + +VWK AP+ W+     +  F  WW  +      Q   + I ++  ILW LW
Sbjct: 400  LMLNCQHSQQVWKAAPIQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLW 459

Query: 1063 KTRNLWRFQN--VLMPEKEIVEFATKEWLEYN---------SVR----SKDDQHFKNPGI 1197
            K RN   F+N     P + I + A KEWLE           S+R    +K++QH      
Sbjct: 460  KERNSKEFENKTSCSPARTIGK-AQKEWLEQEEFTKGKTRLSIRETTCNKEEQH------ 512

Query: 1198 YHTSPYLNPDVAKDVGQFYILVSVQVQLNKEAGWGIVVKNTEGNIIK--SWYTSRDCSGS 1371
                         + G   + +++  Q N +   GI V  T+   ++   W       G 
Sbjct: 513  ---------QGCNEEGTIKLEMAITSQ-NGQTSLGIGVTATKHPSLRLAEWALKERSKGD 562

Query: 1372 PVEVLLLAIREGQLMAYKEKWKRIIFLLEDESLVTILNGGQCSALESSSTAEDIFLFKNL 1551
             V    +A+      A++ +W RI    + + L+  +     S    ++  EDI   + L
Sbjct: 563  KVIDEAMAVHLVLCKAFEHQWSRITIQFQSQDLMRQIKYNSPSNSRLATLIEDILSMQKL 622

Query: 1552 FDCCLFQLSD 1581
            F  CLF L++
Sbjct: 623  FRLCLFSLAN 632


>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 896

 Score =  234 bits (597), Expect = 8e-64
 Identities = 146/537 (27%), Positives = 263/537 (48%), Gaps = 5/537 (0%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            VF++P  VC  ++   ++FWWG +D  S+ +HW  W +++  K+ GG+GFRDF+ FN +L
Sbjct: 336  VFKMPKKVCDDINNTLAQFWWGKSDG-SKGMHWFAWQRMSLPKKEGGMGFRDFEKFNDAL 394

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            +AKQ+WR++ +P  LM++++KG+YFP  ++         S++W   +  + +L+ G+RF 
Sbjct: 395  LAKQVWRILIKPNSLMARVLKGKYFPNSNILKAGTKKQSSYIWNSLLHGQALLKRGLRFI 454

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G+ + +W  PW+P  P   P     +   + +V EL++ +   W EEL+       D
Sbjct: 455  IGNGESVSLWADPWLPTSPPRSP-IPKDQSNPMTKVSELMKQNQTGWNEELIRHTIVEAD 513

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXX 720
            AE IL + L +  D D L WH+     ++V S Y +     + L  +P            
Sbjct: 514  AEEILSMKLCAYADTDPLVWHYNKSGEYSVKSGYWLATHDPQDLPIEPPPGS-----IIL 568

Query: 721  XXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCP 900
                       K++HF+W+ V S LP  +NL  + +     C  C  E ET+EH+FF C 
Sbjct: 569  KNMIWKLPTAPKLQHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHCQQE-ETTEHLFFECF 627

Query: 901  RAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRI-SMSVYILWWLWKTRNL 1077
             A ++W+ + +  NI+   + Q     K +  + K     D +  +  +ILW +WK RN 
Sbjct: 628  YAQRIWRASGLPHNIF--YQAQSTLEDKLMALLQKIPNLPDHLRHLPWWILWRIWKCRNK 685

Query: 1078 WRFQNVLMPEKEIVE---FATKEWLE-YNSVRSKDDQHFKNPGIYHTSPYLNPDVAKDVG 1245
              FQ   +  +  ++   F TKEWLE Y SV   +D+      + H            V 
Sbjct: 686  MIFQQTSIHWRTTLQSAYFDTKEWLEAYQSVDKDEDRQGLRRDMEHQRNKWTKPPTGFVK 745

Query: 1246 QFYILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCSGSPVEVLLLAIREGQLMAYK 1425
              Y      +Q   +AGW  ++++  G    + + S     + +E  L A+    +  + 
Sbjct: 746  CNYDGAFNNIQRETKAGW--IIRDDMGRFKGAAHASNQQPTTALEGELQALLLAMMNCWS 803

Query: 1426 EKWKRIIFLLEDESLVTILNGGQCSALESSSTAEDIFLFKNLFDCCLFQLSDNLRNL 1596
            + +K +IF  ++ +++ + N G+ + ++ ++   DI+ +   F+   F  ++   NL
Sbjct: 804  KGYKHVIFEGDNINVMKLAN-GESTNIDVTNWIRDIWRWPAKFEEIKFCWTNRNSNL 859


>ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 812

 Score =  231 bits (590), Expect = 3e-63
 Identities = 124/388 (31%), Positives = 196/388 (50%), Gaps = 4/388 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LPV++C+ +    + FWW  +  K+  +HW  W+K+   K+ GGLGFRD   FNL+ +
Sbjct: 380  FKLPVNLCKEMESNIANFWWRGSREKNG-MHWISWEKMKRRKKVGGLGFRDLLSFNLAYL 438

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WR+++ P  L+SKI+K +YFP       K     +W W+G M+ KK+LE G R+ V
Sbjct: 439  AKIGWRILTNPLSLLSKILKXKYFPECSFMEAKVGKRSTWGWKGIMQGKKILERGRRWRV 498

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G  I++   PW+P+  +F     H +    V V +L+     +W  +LV   F   ++
Sbjct: 499  GDGSSIRVKYDPWLPRPHTFRVISKHLDMP--VMVKDLINPVTGSWMVDLVKGCFEEEES 556

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVV---QQHRRLLKGDPDTSDGNXXXX 714
             IIL IP    G  DR+ WHHT+  ++TV + Y +V   Q++  L +             
Sbjct: 557  NIILGIPTSLEGCNDRIIWHHTSNGDYTVKTGYGIVMEMQENCELGRKRTRGCSRRDEPD 616

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      + NKMK+FIWRC  S L +  NL  + ++++  C  CG+  ET  H+FF 
Sbjct: 617  KCWMEIWRLKVPNKMKYFIWRCCTSSLAARGNLHRRRMRVNTTCVLCGDAKETEHHLFFE 676

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMS-VYILWWLWKTR 1071
            C  +   W   P+  +I   +   FG  W  +C   + +  ++ I    V+I+W +WK R
Sbjct: 677  CEFSRVFWFSCPLQLDIKLATRKDFGDCWYSLCNRFRKEKNHELILQECVFIMWRIWKCR 736

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEYNS 1155
            N   F+       E V     + +EY +
Sbjct: 737  NDLLFKGTEANPMESVNVVRSQIMEYRA 764


>ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 524

 Score =  223 bits (567), Expect = 3e-62
 Identities = 119/392 (30%), Positives = 195/392 (49%), Gaps = 8/392 (2%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            VF+LP ++C  ++ + +KFWWG+ D     +HW  W +++  K+ GGLGFRD + FN +L
Sbjct: 73   VFRLPRNICDEINSILAKFWWGSGDKTG--MHWYSWKRVSVPKREGGLGFRDLEKFNQAL 130

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++  PQ LM++IIK RYFP G++ +       S+ W+  +  + +L+ GMRF 
Sbjct: 131  LGKQVWRIIQNPQCLMARIIKARYFPDGNIFTATIKRKSSYAWKSLIYGRDLLKRGMRFI 190

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G  + +W  PW+P  P   P R       +  V   +  DG  W  + + +   P D
Sbjct: 191  IGDGSTVNMWADPWLPVHPPRAP-RSRNGTQALESVRNYMLEDGTGWNIDKLRDNVVPED 249

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXX 720
             E+IL + + S    D L WH+T    +TV S Y +          D D  +        
Sbjct: 250  VEVILSLKISSNAQLDLLGWHYTDDGIYTVKSGYWLSTH-----LPDNDIIEPIWGDPLI 304

Query: 721  XXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCP 900
                   N   K+KHF+W+ +   L   +NL  + +   + C  C + +ET +H+ F CP
Sbjct: 305  KQRVWKMNSPPKIKHFLWKTLSRSLAVGSNLKRRHITRYDQCMRCCSAIETEQHMLFDCP 364

Query: 901  RAMKVWKLAPVSWNI----WPTSEVQFGWWWKEVCTMTKTQFAYDRI-SMSVYILWWLWK 1065
             A K+W+ + +S NI    + T E +      E C       +   I  + +Y+LW +WK
Sbjct: 365  YAQKIWRASGISSNIINGSYSTLEEKI-----EACLTCNRSSSLTHIKDLPIYLLWRIWK 419

Query: 1066 TRNLWRFQNVLMPEKEIVEFA---TKEWLEYN 1152
            +RN+  FQ   +    ++  A     EW +Y+
Sbjct: 420  SRNMMMFQQRNIQWWSVIHQANADAAEWSKYS 451


>ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413636 [Brassica napus]
          Length = 1521

 Score =  232 bits (591), Expect = 5e-62
 Identities = 148/519 (28%), Positives = 252/519 (48%), Gaps = 23/519 (4%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            VF+L   +C+ ++ + ++FWW + + K   IHW  W K+   K+ GGLGFRD ++FN +L
Sbjct: 812  VFKLTKEICEEINGILARFWWDSGEKKG--IHWFSWKKMGLPKREGGLGFRDLENFNQAL 869

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++  P+ LM++I++ RYFP GD+ + +     S+ W+  +  + +++ GMRF 
Sbjct: 870  LGKQVWRIMQHPECLMARILRARYFPDGDILNARLQKRASYAWKSLLHGRNLVKQGMRFI 929

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G+ I +W  PWIP  P   P R   +   + +V E    D   W E  + E   P D
Sbjct: 930  IGNGELINMWTDPWIPDHPP-RPPRPLNQTEEICKVNEFFSADRNHWDERKLRERIHPED 988

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAY--SVVQQHRRLLKGDPDTSDGNXXXX 714
             + IL I + S   +D + WH+     ++V S Y  S  QQ + L+   P +        
Sbjct: 989  VDKILAIKISSKAQQDLMGWHYNEDGIYSVKSGYWVSSHQQEQGLIYQIPGS-------I 1041

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                         K++HF+WR +   LP  +NL  + +  D++C  C  + E+  H+FF 
Sbjct: 1042 VLKQRIWKLKSPPKLQHFLWRILSQCLPVGSNLKRRHVVPDDVCQRCFQQEESELHVFFE 1101

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTM-TKTQFAYDRISMSVYILWWLWKTR 1071
            CP A  +W+ + +   +  +S   F    +E   + T T+  + +    ++ILW LWK+R
Sbjct: 1102 CPYAKMIWRTSGLDNAVINSSTSSFEDKIQECINIGTSTRLIHFQ-DQPIWILWRLWKSR 1160

Query: 1072 NLWRFQNVLMPEKEIVEFA---TKEWLEYN-------------SVRSKDDQHFKNPGIYH 1203
            N+  FQ   +P + ++  +    KEW +               S RS+D +  K P  + 
Sbjct: 1161 NMLIFQQKDIPWRTLIRQSREDAKEWFDTTRNIGLSTQQGRNISARSRDTRWAKPPRGWM 1220

Query: 1204 TSPYLNPDVAKDVGQFYILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCSGSPVEV 1383
                +N D     G F     +   +  +AGW  V++++EG        +  C  + +E 
Sbjct: 1221 K---INVD-----GSF-----INNTMKSKAGW--VLRDSEGRYQGGVQATGRCVNNALES 1265

Query: 1384 LLLAIREGQLMAYKEKWKR----IIFLLEDESLVTILNG 1488
             L AI    LMA +  W R    I    +++ +V I+NG
Sbjct: 1266 ELQAI----LMAMQHAWSRGHLKICIESDNQKVVDIING 1300


>ref|XP_008340321.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 565

 Score =  221 bits (564), Expect = 2e-61
 Identities = 129/402 (32%), Positives = 191/402 (47%), Gaps = 6/402 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP+ VC+ + +    +WW   ++ S+ IHW  WD+L + K+ GGLGF+D Q  NL+ +
Sbjct: 4    FKLPIGVCRDVERAIRNYWWRGNEH-SKGIHWISWDRLMKQKKAGGLGFKDIQCVNLAFL 62

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WRV   P  L++ +++ +YFP             SW W+G  +A+KVL LG+R+ V
Sbjct: 63   AKIGWRVTQNPMSLIASVLRDKYFPGKTFGEAPKGKNTSWGWKGLFEARKVLNLGLRWRV 122

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G GK I I + PW PK PS       T   G + V +L++ D  +W+ + +   F  +D 
Sbjct: 123  GNGKSINIRKDPWFPK-PSTFKAYPTTNLVGTM-VSDLIDPDTNSWRTDSIANGFHRDDV 180

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSV---VQQHRRLLKGDPDTSDGNXXXX 714
              IL IPL   G  DRL WH+T    + V S YS+   + +   L +    T   +    
Sbjct: 181  LPILSIPLSHAGIDDRLVWHYTTNGIYXVKSGYSLALKLMEEXALGRKGXGTPSESNKLN 240

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      + NK+K FIWRC  + L    NL  + +++D +C  C    ET  H+FF 
Sbjct: 241  LVWNNIWRLXVPNKIKIFIWRCCNNALAVRRNLKRRHMRVDNVCGVCNAFNETENHLFFR 300

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMS-VYILWWLWKTR 1071
            C  +   W  +P+  N        F   W   C   K     D I     + LW LWK R
Sbjct: 301  CELSHVFWFCSPLHLNSHVLEGSDFLESWSNFCAQVKDXINADDICQDFXFGLWRLWKNR 360

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEYNS--VRSKDDQHFKNP 1191
            N   F+ +     +I+E   K   EY     R+ DD   + P
Sbjct: 361  NDVVFKGIHRQPLDILEAWRKSTSEYKDSLARNADDFSXRLP 402


>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 459

 Score =  218 bits (556), Expect = 3e-61
 Identities = 120/393 (30%), Positives = 196/393 (49%), Gaps = 9/393 (2%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            VF+LP ++C  ++ + +KFWWG+   K   +HW  W +++  K+ GGLGFRD + FN +L
Sbjct: 73   VFRLPRNICDEINSILAKFWWGSGVKKG--MHWYSWKRVSVPKREGGLGFRDLEKFNQAL 130

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++  PQ LM++IIK RYFP G+  +       S+ W+  +  + +L+ GMRF 
Sbjct: 131  LGKQVWRIIQNPQCLMARIIKARYFPDGNTFTATIKRKSSYAWKSLIYGRDLLKRGMRFI 190

Query: 361  VGGGKEIKIWETPWIPKFPSFLP-DRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPN 537
            +G G  + +W  PW+   P   P  R  T+    VR    ++ DG  W  + + +   P 
Sbjct: 191  IGDGSTVNMWADPWLQVHPPIAPRSRNGTQVLESVR--NYMKEDGTGWNIDKLRDNVVPE 248

Query: 538  DAEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXX 717
            D E+IL + + S    D L WH+T    +TV S Y +          D D  +       
Sbjct: 249  DVEVILSLKISSNAQLDLLGWHYTDDGIYTVKSGYWLSTH-----LPDNDIIEPIWGDPL 303

Query: 718  XXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHC 897
                    N   K+KHF+W+ +   L   +NL  + +   + C  C + +ET +H+ F C
Sbjct: 304  IKQRVWKMNSPPKIKHFLWKTLSRSLVVGSNLKRRHITRYDQCMRCCSAIETEQHMLFDC 363

Query: 898  PRAMKVWKLAPVSWNI----WPTSEVQFGWWWKEVCTMTKTQFAYDRI-SMSVYILWWLW 1062
            P A K+W+ + +S NI    + T E +      E C       +   I  + +Y+LW +W
Sbjct: 364  PYAQKIWRASGISSNIINGSYSTLEEKI-----EACLTCNRSSSLAHIKDLPIYLLWRIW 418

Query: 1063 KTRNLWRFQNVLMPEKEIVEFA---TKEWLEYN 1152
            K+RN+  FQ   +    ++  A     EW +Y+
Sbjct: 419  KSRNMMMFQQRNIQWWSVIHQANADAAEWSKYS 451


>ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 712

 Score =  223 bits (568), Expect = 8e-61
 Identities = 140/503 (27%), Positives = 237/503 (47%), Gaps = 8/503 (1%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            +F+LP  VC+ ++ + ++FWWG  ++K   +HW  W ++   K+ GGLGFRD + FN +L
Sbjct: 149  IFRLPKEVCEEINAILARFWWGTGESKG--LHWYAWKRVCIPKREGGLGFRDLESFNQAL 206

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++  P  LM+++++ RYFP GD+         S+ W+  +  K ++  GMR+ 
Sbjct: 207  LGKQVWRIMQNPNCLMARVLRARYFPEGDILKATLKKKSSYAWKSILHGKDLIVKGMRYI 266

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G+  K+W   W+   P   P R   E     +V + + N+G+ W  + + E     D
Sbjct: 267  IGNGESTKMWTDSWLSLHPP-RPPRSRGEVNTNSKVSDYVLNNGRGWNLDKLREDVIQED 325

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXX 720
             E IL++ + S   +D + WH+T    +TV S Y +V         D +           
Sbjct: 326  IEKILELKISSKARQDLMGWHYTDNGLYTVKSGYWLVTH-----LPDNNYIPPTYGSVAL 380

Query: 721  XXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCP 900
                    +  K+KHF+WR     + +  NL  + +  D IC  C  E ET EH+FF CP
Sbjct: 381  KQKLWKVKVPAKLKHFLWRISSRSIATGNNLKRRHVTPDAICKRCWLEEETEEHLFFTCP 440

Query: 901  RAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRI-SMSVYILWWLWKTRNL 1077
             A KVW+ + ++ N+   S +       E C    T  +      + ++ILW LWK+RN+
Sbjct: 441  YAKKVWRASGIN-NLVLDSTMSTYEEKLEACLQVSTAISLSHYQDLPIWILWRLWKSRNV 499

Query: 1078 WRFQNVLMPEKEIVEFATKEWLEYNSVRSKD----DQHFKNPGIYHTSPYLNPD---VAK 1236
              FQ      K I+  A  +  E+ ++ ++D    D H  +P    +  +  P    +  
Sbjct: 500  LVFQQRDFHWKNILSAARSDAREWRNIETQDNNASDGHSISPTSRSSQRWKAPPNRWLKC 559

Query: 1237 DVGQFYILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCSGSPVEVLLLAIREGQLM 1416
            +V   +I      +    AGW  V+++  G    +     +   SP+E  L AI      
Sbjct: 560  NVDASFI----DTREPSSAGW--VIRDEHGIYKGAVQVQGNMVCSPLESELQAILMAVQF 613

Query: 1417 AYKEKWKRIIFLLEDESLVTILN 1485
             + + + RII   +    + ILN
Sbjct: 614  CWTKGYNRIIIESDCRKAIDILN 636


>ref|XP_009123721.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 622

 Score =  221 bits (562), Expect = 1e-60
 Identities = 127/393 (32%), Positives = 194/393 (49%), Gaps = 8/393 (2%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F LP+  C++L+   ++FWW +   K R IHWAKW+K+  S++ GG+GFR   +FNL+L+
Sbjct: 109  FLLPLETCESLASAIAQFWWSSNPPK-RGIHWAKWEKVCLSREEGGIGFRLIHEFNLALL 167

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AKQLWR+V  P  L++++++GRY+ L     + P S  S++W     A+K+L LG+R  +
Sbjct: 168  AKQLWRLVQFPDSLVARVLRGRYYRLSSPLRVNPTSSPSYVWTSISAARKLLLLGIRQKI 227

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
              G E+K+WE PWIP  P+     +       +RV +L++   K W   L+     P D 
Sbjct: 228  HSGYEVKVWEDPWIPSNPARPAAPIAPVMNPNMRVSDLIDQGVKDWNVGLLENYVHPEDI 287

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXXX 723
             +I  + + S   +D   W+ T    +TV S Y V Q    LLK   +            
Sbjct: 288  PLIRSLAISSTHRRDTFCWNFTRSGQYTVKSGYWVAQ---NLLKLSEEKEVLEPSITKLQ 344

Query: 724  XXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPR 903
                      K+ H IW+ +   +    NL  + ++ D  C  CG   ET  H  F CP 
Sbjct: 345  GFAWKLKAPTKICHLIWQLLTGHVAVTRNLVRRNMRCDNYCPRCGEAEETVTHAIFECPP 404

Query: 904  AMKVWKLA--PVSWNIWPTSEVQFGW---WWKEVCTMTKTQFAYDRISMSVYILWWLWKT 1068
            A +VW L+  P   NI+P S V       +W++   M   Q   DR     +I+W++W+ 
Sbjct: 405  ARQVWSLSSTPTCPNIFPVSSVYTNMDYLFWRKNSIMEPEQ---DR-DPYPWIIWFIWEA 460

Query: 1069 RNLWRFQNVLMPEKEIVEFATKE---WLEYNSV 1158
            RN   F+ +     E+V  A  E   W E N V
Sbjct: 461  RNEKLFREIDRDPLELVRHAESECQAWFEANEV 493


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score =  223 bits (567), Expect = 4e-60
 Identities = 128/414 (30%), Positives = 201/414 (48%), Gaps = 8/414 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP+ VC+ + +    +WW     K R  HWA WDKL + K  GGLGF+D Q FNL+ +
Sbjct: 280  FKLPIGVCRDMEKAVRSYWWRGNSQK-RGCHWASWDKLMKQKSAGGLGFKDIQCFNLAFL 338

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WR++  P  L++ +++ +Y+P             SW W+G  +++ VL+ G+R+ V
Sbjct: 339  AKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTVLQHGVRWRV 398

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G+ I I + PW+P   +FL   +   E   ++V +L++   K+WKE ++ E F   +A
Sbjct: 399  GDGESINIRKDPWLPTPTTFLAKPLDNLEE--IKVRDLIDPISKSWKEGVITEGFNREEA 456

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSV---VQQHRRLLKGDPDTSDGNXXXX 714
              IL IPL   G  DRL WH+T   +++V + Y V   + ++  L K     S       
Sbjct: 457  RTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGYGVAMNMMENGALGKKGRGASSMLRKNN 516

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      + NK+K F+W+C    L    NL  + ++++ IC  C    E+  H+FF 
Sbjct: 517  LTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQ 576

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSV-YILWWLWKTR 1071
            C  + + W  +P+  N    +   F   W ++CT TK     + I   V + LW LWK R
Sbjct: 577  CDFSHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNR 636

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEYNSVRSK----DDQHFKNPGIYHTSPYLN 1221
            N   F  V     E++    K   E+    S     +DQ   N      SP L+
Sbjct: 637  NDVVFNGVHRQHLEVMMLWRKNIYEFREALSLSLKCEDQLISNNLKTEQSPRLH 690


>ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 623

 Score =  219 bits (558), Expect = 5e-60
 Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 5/393 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP+ VC+ + +    +WW   D K   +HW  WD+L  +K+ GGLGF+D Q FNL+ +
Sbjct: 50   FKLPIGVCRDVERAIRNYWWRGNDQKMG-VHWISWDRLMRNKKLGGLGFKDIQCFNLAFL 108

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WR++  P  L++ +++ +YFP             SW W+G  +A++VL+ G+R+ V
Sbjct: 109  AKIGWRILQNPSSLLACVLREKYFPDKTFREAGKGKNTSWGWKGIFEARRVLQHGIRWRV 168

Query: 364  GGGKEIKIWETPWIPKFPSFL-PDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            G G +I I   PW PK  +FL   R   +ET    V EL+E + ++WK E+++  F+  D
Sbjct: 169  GDGNQINIRNDPWFPKPTTFLVKPRECLQET---LVSELIEPNSRSWKREVILHGFSSED 225

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSV---VQQHRRLLKGDPDTSDGNXXX 711
             + IL IPL   G  DRL WHHT   +++V + Y V   + ++  L K        +   
Sbjct: 226  TKHILSIPLSKFGCCDRLVWHHTVDGSYSVKTGYRVAVSLLENGALGKKGRGAPSTHHTS 285

Query: 712  XXXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFF 891
                       + NK+K FIWRC    L    NL  + ++ID +C  C    E+  H+FF
Sbjct: 286  NQVWKGIWNLQVPNKIKFFIWRCCNKALAVRHNLKRRHMRIDNVCGVCNLVDESENHLFF 345

Query: 892  HCPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMS-VYILWWLWKT 1068
             C  + ++W  +P+           F   W   CT  K +   + I     + LW +WK 
Sbjct: 346  RCDLSQRLWFCSPLHLYSIELIGADFLESWNNFCTSIKDREDAEAILQEFAFGLWRIWKN 405

Query: 1069 RNLWRFQNVLMPEKEIVEFATKEWLEYNSVRSK 1167
            RN   F+       EI+    K   EY    ++
Sbjct: 406  RNDVVFKGSHCQPNEILTVWRKNIGEYREAMNR 438


>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score =  218 bits (554), Expect = 5e-60
 Identities = 136/463 (29%), Positives = 217/463 (46%), Gaps = 17/463 (3%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+L   +C  +S++ +K+WW +   K  ++HW  W+KL   K  GGLGFRD   FNL+++
Sbjct: 4    FELTKDLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAML 62

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AKQ WR++ +P  L S++++ +YFPLGD    K  S  S+ WR   K  +VL+ GM + +
Sbjct: 63   AKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRM 122

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G +I IW  PWIP+  S  P         V +V EL++     W E+L+ + F   D 
Sbjct: 123  GDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDPYTGTWDEDLLSQTFWEEDV 181

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQ--QHRRLLKGDPDTSDGNXXXXX 717
              I  IP +    +D L WH  A+  FTV SAY V +  + R    G P  S+       
Sbjct: 182  AAIKSIP-VHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDD 240

Query: 718  XXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHC 897
                     +  K+KHF+WR  ++ L   ANL  +G+ +D  C  CG   E + H+FF C
Sbjct: 241  FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKC 300

Query: 898  PRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSVY----------- 1044
                KVW+   +                +E+ +M K Q +   +  S+Y           
Sbjct: 301  KPVKKVWQALNL----------------EELRSMLKQQTSGKNVLQSIYCRPENERTSAI 344

Query: 1045 -ILWWLWKTRNLWRFQNVLMPEKEIVEFATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLN 1221
              LW  WK RN  R   +     E+      +  E+  +  K+    K+P     + +  
Sbjct: 345  VCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKE----KSPRTGECAVWRR 400

Query: 1222 PDVAKDVGQFYILVSVQVQLN---KEAGWGIVVKNTEGNIIKS 1341
            P +       ++ ++     +   K+ GWG V+K+  G ++++
Sbjct: 401  PPLN------FVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQA 437


>ref|XP_009113015.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 731

 Score =  221 bits (563), Expect = 6e-60
 Identities = 124/395 (31%), Positives = 198/395 (50%), Gaps = 9/395 (2%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            +F LP+ +C+ L+   +KFWW +   K R +HWAKW+K+   ++ GG+GFR   +FNL+L
Sbjct: 180  MFLLPLEICENLAAAIAKFWWSSNPPK-RGMHWAKWEKICLPREEGGIGFRLIHEFNLAL 238

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            +AKQLWR+V  P  L+++++KGRY+ L    S+ P S  S++W     A+++L +G+R  
Sbjct: 239  LAKQLWRLVQFPDSLVARVLKGRYYRLCSPLSVIPASSPSYVWTSISAARELLMMGIRQK 298

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            V  G E+KI + PWIP  P+     V       +RV +L+  D K W   L+ +    +D
Sbjct: 299  VHSGYEVKILQDPWIPTVPARAAHSVAPVMNPNMRVSDLINQDSKDWDVSLLEKYVNRDD 358

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXX 720
              +I  + + S   +D   W +T    +TV S Y V    R LLK + +           
Sbjct: 359  IPLIRSLAISSAHRRDTFCWSYTRNGQYTVKSGYWVA---RTLLKPEEEKEVVEPSITEI 415

Query: 721  XXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCP 900
                       K+ H IW+ +   +    NL  + ++ D  C  CG   E+  H  F CP
Sbjct: 416  QAFAWKLKAPKKICHLIWQLLTGHVAVTRNLVRRKMRCDNYCPRCGEPEESVTHAIFECP 475

Query: 901  RAMKVWKLA--PVSWNIWPTSEV----QFGWWWKEVCTMTKTQFAYDRISMSVYILWWLW 1062
             AM+ W L+  P S N++P S V     + +W K +    + +  Y       +I+W++W
Sbjct: 476  PAMQAWLLSSTPTSPNLFPVSSVYTNMDYLFWRKSIIDPEQDRDPYP------WIIWYIW 529

Query: 1063 KTRNLWRFQNVLMPEKEIVEFATKE---WLEYNSV 1158
            K RN   F+ +     E+V +A  E   W + N V
Sbjct: 530  KARNDKLFRGIDRDPLELVRYAESECQAWFDANEV 564


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score =  222 bits (566), Expect = 1e-59
 Identities = 128/414 (30%), Positives = 200/414 (48%), Gaps = 8/414 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP+ VC+ + +    +WW     K R  HWA WDKL + K  GGLGF+D Q FNL+ +
Sbjct: 308  FKLPIGVCRDMEKAVRSYWWRGNSQK-RGCHWASWDKLMKQKSAGGLGFKDIQCFNLAFL 366

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WR++  P  L++ +++ +Y+P             SW W+G  +++ VL+ G+R+ V
Sbjct: 367  AKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTVLQHGVRWRV 426

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G+ I I + PW+P   +FL   +   E   ++V +L++   K+WKE ++ E F   +A
Sbjct: 427  GDGESINIRKDPWLPTPTTFLAKPLDNLEE--IKVRDLIDPISKSWKEGVITEGFNREEA 484

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVV---QQHRRLLKGDPDTSDGNXXXX 714
              IL IPL   G  DRL WH+T   +++V + Y V     ++  L K     S       
Sbjct: 485  RTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGYGVAMNXMENGALGKKGRGASSMLRKNN 544

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      + NK+K F+W+C    L    NL  + ++++ IC  C    E+  H+FF 
Sbjct: 545  LTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQ 604

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSV-YILWWLWKTR 1071
            C  + + W  +P+  N    +   F   W ++CT TK     + I   V + LW LWK R
Sbjct: 605  CDFSHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQEVAFGLWRLWKNR 664

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEYNSVRSK----DDQHFKNPGIYHTSPYLN 1221
            N   F  V     E++    K   E+    S     +DQ   N      SP L+
Sbjct: 665  NDVVFNGVHRQHLEVMMLWRKNIYEFREALSLSLKCEDQLISNNLKTEQSPRLH 718


>ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 887

 Score =  222 bits (566), Expect = 1e-59
 Identities = 121/388 (31%), Positives = 193/388 (49%), Gaps = 4/388 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LPV++C+ +    + FWW  +  K+  +HW  W+K+   K+ GGLGFRD   FNL+ +
Sbjct: 395  FKLPVNLCKEMETNIANFWWRGSREKNG-MHWISWEKMKRRKKVGGLGFRDILSFNLAYL 453

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
             K  WR+++ P  L+ KI+K +YFP       K     SW W+G M+ K++LE G R+ V
Sbjct: 454  TKIGWRILTNPLSLLGKILKEKYFPECSFMEAKVGKRSSWGWKGIMQGKRILERGRRWRV 513

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G  I++   PW+P+  +F  +  H +    V V +L++    +W  ELV   F   ++
Sbjct: 514  GDGSSIRVKIDPWLPRPHTFRVNSNHPDMP--VMVKDLIDPVTGSWMVELVKGCFEEEES 571

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSV---VQQHRRLLKGDPDTSDGNXXXX 714
             IIL IP    G  DR+ WH T+  ++TV + Y +   +Q++  L +             
Sbjct: 572  NIILGIPTXLEGCDDRIIWHXTSNGDYTVRTGYGIAMDMQENXELGRKGTGGCSRRDEPB 631

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                      + NKMK FIWRC  S L    NL  + ++++  C  CG+  ET  H+FF 
Sbjct: 632  KRWMEIWRLEVPNKMKFFIWRCCXSSLAVRGNLHRRRMRVNTACVLCGDARETEHHLFFE 691

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMS-VYILWWLWKTR 1071
            C  +   W   P+  +I   S  +FG  W  +C   + +  +  I    V+I+W +WK R
Sbjct: 692  CEFSRVFWFSCPLQLDITFASGKEFGDCWHXLCNRFRKEKNHVLILQECVFIMWRIWKCR 751

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEYNS 1155
            N   F+ +     E V     + + Y +
Sbjct: 752  NDLMFKGMEANPMESVNVVRNQIMXYRA 779


>ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355549 [Brassica napus]
          Length = 1726

 Score =  223 bits (567), Expect = 7e-59
 Identities = 139/503 (27%), Positives = 239/503 (47%), Gaps = 8/503 (1%)
 Frame = +1

Query: 1    VFQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSL 180
            +F+LP  VC+ ++ + ++FWWG  ++K   +HW  W ++   K+ GGLGFRD + FN +L
Sbjct: 812  IFRLPKEVCEEINAILARFWWGTGESKG--LHWYAWKRVCIPKREGGLGFRDLESFNQAL 869

Query: 181  IAKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFS 360
            + KQ+WR++  P  LM+++++ RYFP GD+      +  S+ W+  +  K+++  GMR+ 
Sbjct: 870  LGKQVWRIMQNPNCLMARVLRARYFPDGDILKATLKNKSSYAWKSILYGKELIVKGMRYI 929

Query: 361  VGGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPND 540
            +G G+  K+W   W+   P   P R   E     +V + + N+G+ W  + + E     D
Sbjct: 930  IGNGESTKMWTDSWLSLHPP-RPPRPRGEVNITSKVSDYVLNNGRGWNLDKLREDVIQED 988

Query: 541  AEIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXX 720
               IL++ + S   +D + WH+T    +TV S Y +V         D +           
Sbjct: 989  VGKILELKISSKARQDLMGWHYTDNGLYTVKSGYWLVTH-----LPDNNYIPPTYGSVAL 1043

Query: 721  XXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCP 900
                    +  K+KHF+WR     + +  NL  + +  D IC  C  E ET EH+FF CP
Sbjct: 1044 KQKLWKVKVPAKLKHFLWRISSRSIATGNNLKRRHVTPDVICKRCWLEEETEEHLFFTCP 1103

Query: 901  RAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRI-SMSVYILWWLWKTRNL 1077
             A KVW+ + ++ N+   S V       EVC    T  +      + ++ILW LWK+RN+
Sbjct: 1104 YAKKVWRASGIN-NLVLDSTVSTYEEKLEVCLQVSTATSLCHYQDLPIWILWRLWKSRNV 1162

Query: 1078 WRFQNVLMPEKEIVEFATKEWLEYNSVRSKD----DQHFKNPGIYHTSPYLNPD---VAK 1236
              FQ      + I+  A  +  E+ ++ ++D    D H  +P    +  +  P    +  
Sbjct: 1163 LVFQQRAFHWRNILSAARSDAREWRNIEAQDNNPSDGHIISPTSRSSQRWQTPPNRWLKC 1222

Query: 1237 DVGQFYILVSVQVQLNKEAGWGIVVKNTEGNIIKSWYTSRDCSGSPVEVLLLAIREGQLM 1416
            +V   +I      +    AGW  V+++  G    +     +   SP+E  L AI      
Sbjct: 1223 NVDASFI----DTREPSSAGW--VIRDEHGIYKGAVQIQGNTVSSPLESELQAILMAVQF 1276

Query: 1417 AYKEKWKRIIFLLEDESLVTILN 1485
             + + + +II   +    + ILN
Sbjct: 1277 CWTKGYNKIIVESDCRKAIDILN 1299


>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
          Length = 1503

 Score =  221 bits (564), Expect = 2e-58
 Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 3/359 (0%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F LP S    L    S++WW   + K   IHW  WD ++ S + GGLGFRD  DFNL+L+
Sbjct: 1147 FALPKSFLGDLQSAISRYWWRNRNGKG--IHWKSWDFISRSFKEGGLGFRDLHDFNLALL 1204

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
             KQ+WR+ S P  ++S++ + +YFP GD+ + +P +  S++W G MK++ ++  G+R  +
Sbjct: 1205 GKQVWRIASAPHSILSRVFRAKYFPNGDIWTARPCARGSYVWNGIMKSRDLVSKGIRHLI 1264

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G  + IW  PWIPK P+F P  +  E      V  L+++  K W    + E F P DA
Sbjct: 1265 GDGSSVDIWHDPWIPKPPTFKPTNLLGERRR-ASVATLIDSRTKWWDVGRIREKFDPVDA 1323

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQQHRRLLKGDPDTSDGNXXXXXXX 723
              I+ IPL     +D++ WH++    +TV SAY +V+  R  ++    +SD         
Sbjct: 1324 NHIISIPLSESPSEDKILWHYSKSGTYTVRSAYHLVRSLR--VEVSSSSSDSRVTPKVWD 1381

Query: 724  XXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHCPR 903
                      K+  F+WR  +  LP+   L  + + ID+ C  C N  E+  HI   CP 
Sbjct: 1382 LIWKHACCP-KIGLFMWRLAHGCLPTNETLWRRRIPIDKECSICLNRTESDRHILLECPP 1440

Query: 904  AMKVWKLAPVSW---NIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSVYILWWLWKTR 1071
            A++VW L+ + W   N W        W      T+     A+ R+    + LWW   +R
Sbjct: 1441 AIQVWALSDLPWGAINTWRDGASAIDWISSVSATLKPA--AFSRLMTIAWFLWWKRNSR 1497


>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score =  221 bits (563), Expect = 2e-58
 Identities = 123/386 (31%), Positives = 191/386 (49%), Gaps = 4/386 (1%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+LP+ VC+ + +    +WW     K R  HW  WD+L + K  GG+GF+D Q FNL+ +
Sbjct: 739  FKLPIGVCRDVEKAVRSYWWRGNTQK-RGCHWTSWDRLMKQKSAGGMGFKDIQCFNLAFL 797

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AK  WR++  P  L++ ++K +Y+P             SW W+G  +   VL+ G+R+ V
Sbjct: 798  AKIGWRLIQNPTSLLATVLKDKYYPGKCFKDAGKGRNTSWGWKGIFEGHMVLQHGVRWRV 857

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G+ I I + PW+P   +FL   + + E   VR  +L++   K+WKEE+++  F  ++A
Sbjct: 858  GDGESINIQKDPWLPTPTTFLAKPLDSLEETKVR--DLIDPISKSWKEEVILAGFNRDEA 915

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVV---QQHRRLLKGDPDTSDGNXXXX 714
              IL IPL   G  DRL WH+T   +++V + Y VV    ++  L K        +    
Sbjct: 916  RKILSIPLSKSGCIDRLVWHYTVNGDYSVKTGYGVVMNLMENGALGKKGRGAPSEHRKNN 975

Query: 715  XXXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFH 894
                        NK+K FIW+C    L    NL  + ++++ IC  C    E+  H+FF 
Sbjct: 976  LTWKRIWKLQAPNKIKFFIWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQ 1035

Query: 895  CPRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSV-YILWWLWKTR 1071
            C  + + W  +P+  N    + V F   W ++CT TK     + I   V + LW LWK R
Sbjct: 1036 CEFSHRFWFGSPLHINSHELAGVDFLESWDKICTSTKNMEKAEEILQEVAFGLWRLWKNR 1095

Query: 1072 NLWRFQNVLMPEKEIVEFATKEWLEY 1149
            N   F  V     E++    K   EY
Sbjct: 1096 NDVVFNGVHRQHLEVMMLWRKNISEY 1121


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score =  215 bits (547), Expect = 2e-58
 Identities = 134/463 (28%), Positives = 217/463 (46%), Gaps = 17/463 (3%)
 Frame = +1

Query: 4    FQLPVSVCQALSQLASKFWWGATDNKSRRIHWAKWDKLAESKQTGGLGFRDFQDFNLSLI 183
            F+L   +C  +S++ +K+WW +   K  ++HW  W+KL   K  GGLGFRD   FNL+++
Sbjct: 4    FELTKDLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAML 62

Query: 184  AKQLWRVVSEPQLLMSKIIKGRYFPLGDLASIKPHSFDSWLWRGWMKAKKVLELGMRFSV 363
            AKQ WR++ +P  L S++++ +YFPLGD    K  S  S+ WR   K  +VL+ GM + +
Sbjct: 63   AKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRM 122

Query: 364  GGGKEIKIWETPWIPKFPSFLPDRVHTEETGVVRVCELLENDGKAWKEELVMEMFTPNDA 543
            G G +I IW  PWIP+  S  P         V +V EL++     W E+L+ + F   D 
Sbjct: 123  GDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDPYTGTWDEDLLSQTFWEEDV 181

Query: 544  EIILKIPLLSPGDKDRLRWHHTAKDNFTVSSAYSVVQ--QHRRLLKGDPDTSDGNXXXXX 717
              I  IP +    +D L WH  A+  FTV SAY V +  + R    G P  S+       
Sbjct: 182  AAIKSIP-VHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDD 240

Query: 718  XXXXXXXXNIKNKMKHFIWRCVYSLLPSAANLCSKGLKIDEICFSCGNEVETSEHIFFHC 897
                     +  K+KHF+WR  ++ L   ANL  +G+ +D  C  CG   E + H+FF C
Sbjct: 241  FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKC 300

Query: 898  PRAMKVWKLAPVSWNIWPTSEVQFGWWWKEVCTMTKTQFAYDRISMSVY----------- 1044
                KVW+   +                +E+ +M + Q +   +  S+Y           
Sbjct: 301  KPVKKVWQALNL----------------EELRSMLEQQTSGKNVLQSIYCRPEIERTSAI 344

Query: 1045 -ILWWLWKTRNLWRFQNVLMPEKEIVEFATKEWLEYNSVRSKDDQHFKNPGIYHTSPYLN 1221
              LW  WK RN  R   +     E+      +  E+  +  K+    K+P     + +  
Sbjct: 345  VCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVRMNVKE----KSPRTGECAVWRR 400

Query: 1222 PDVAKDVGQFYILVSVQVQLN---KEAGWGIVVKNTEGNIIKS 1341
            P +       ++ ++     +   K+ GWG V+++  G ++++
Sbjct: 401  PPLN------FVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQA 437