BLASTX nr result

ID: Rehmannia28_contig00015374 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00015374
         (352 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014626114.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   1e-06
ref|XP_003595510.1| replication factor-A carboxy-terminal domain...    55   1e-06
dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                54   4e-06
ref|XP_013452568.1| animal RPA1 domain protein [Medicago truncat...    52   5e-06

>ref|XP_014626114.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC106796981 [Glycine max]
          Length = 801

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = -2

Query: 228 QGDRIHGTIRKAHIEHYKKLFQEGRVYAIREFIVANFTDKYKTAAGKYKILFHGKTNVFE 49
           +GDR+HG++++  I  + K  QEG+ Y+I+ F VA     Y+T   KYKI+F   T V  
Sbjct: 625 KGDRVHGSVKQTFIYKFDKALQEGKWYSIQFFGVAENGGIYRTTHHKYKIVFQYSTKVAL 684

Query: 48  MFDKSFPKFMY 16
           + + S P  MY
Sbjct: 685 VDNASIPNSMY 695


>ref|XP_003595510.1| replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] gi|355484558|gb|AES65761.1| replication
           factor-A carboxy-terminal domain protein [Medicago
           truncatula]
          Length = 549

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = -2

Query: 228 QGDRIHGTIRKAHIEHYKKLFQEGRVYAIREFIVANFTDKYKTAAGKYKILFHGKTNVFE 49
           +GDRI+ ++R+  I  Y+K  +E RV++I  F VA+    Y+TA   YKI F   T + +
Sbjct: 50  KGDRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQ 109

Query: 48  MFDKSFPKFMYVLRD 4
             DK  P  +YV+ D
Sbjct: 110 CDDKFVPADIYVIGD 124


>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = -2

Query: 243 IFLLMQGDRIHGTIRKAHIEHYKKLFQEGRVYAIREFIVANFTDKYKTAAGKYKILFHGK 64
           IF   +G  +H  I K  +E Y  + + G+VY+IR F+V +    YKT+  KY + F+ K
Sbjct: 45  IFHDKEGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYK 104

Query: 63  TNVFEMFDKSFPKFMYVLR 7
           T V E+ D  FP  M+ L+
Sbjct: 105 TVVRELKDIVFPSHMFRLQ 123


>ref|XP_013452568.1| animal RPA1 domain protein [Medicago truncatula]
           gi|657382727|gb|KEH26596.1| animal RPA1 domain protein
           [Medicago truncatula]
          Length = 172

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 26/73 (35%), Positives = 36/73 (49%)
 Frame = -2

Query: 219 RIHGTIRKAHIEHYKKLFQEGRVYAIREFIVANFTDKYKTAAGKYKILFHGKTNVFEMFD 40
           +IH ++RK  I  +K    EG  Y I  F+V +    YKT   KYK+ F G TNVF +  
Sbjct: 49  KIHASVRKNLIHLFKDQIDEGSAYVIESFMVGSNDHAYKTTGHKYKLNFMGGTNVFRVSS 108

Query: 39  KSFPKFMYVLRDF 1
            + P   +    F
Sbjct: 109 VNIPAHHFTFMPF 121


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