BLASTX nr result

ID: Rehmannia28_contig00015258 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00015258
         (393 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012853570.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-19
ref|XP_011080412.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-18

>ref|XP_012853570.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttata] gi|848848706|ref|XP_012853630.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttata]
           gi|848848710|ref|XP_012853693.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttata] gi|848848713|ref|XP_012853760.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttata]
           gi|848848716|ref|XP_012853815.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttata] gi|848848720|ref|XP_012853859.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttata]
           gi|848848724|ref|XP_012853912.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttata]
          Length = 745

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
 Frame = +2

Query: 140 MASTMIRKNLILNPHFHFPSQNLIYINRFTTRPHLNPDSISADQD--LVETQITSLCRKP 313
           MA T+ R N  LNP FHF S  ++  +  T  PH N  S SA+Q+  +VET+I SLC+KP
Sbjct: 3   MALTISRNNRFLNPSFHFRSGVILLTHFLTPAPHFNHFSTSANQESNIVETRIESLCQKP 62

Query: 314 NSLIDLRKAFSLFEKSVDGGLVPSGP 391
           NS+++LRKA S FE++VD GLVPSGP
Sbjct: 63  NSIVNLRKAVSFFEETVDTGLVPSGP 88


>ref|XP_011080412.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Sesamum indicum] gi|747067389|ref|XP_011080414.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Sesamum indicum]
           gi|747067391|ref|XP_011080415.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Sesamum indicum]
          Length = 742

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +2

Query: 140 MASTMIRKNLILNPHFHFPSQNLIYINRFTTRPHLNPDSISADQ-DLVETQITSLCRKPN 316
           MA T+IRKN +L+P+  FPSQN   IN  ++ P+LN    SA   D VETQI+SLC+K N
Sbjct: 1   MALTIIRKNFLLHPYLLFPSQNRNLINLLSSTPNLNTVCDSAAYLDTVETQISSLCQKSN 60

Query: 317 SLIDLRKAFSLFEKSVDGGLVPSGP 391
           S +  R+AFS+F++SVD GL+PSGP
Sbjct: 61  SSVQFREAFSIFQQSVDMGLIPSGP 85


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