BLASTX nr result
ID: Rehmannia28_contig00015164
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00015164
(403 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ... 166 2e-46
ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ... 161 6e-46
ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ... 161 1e-44
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra... 151 2e-41
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ... 140 9e-37
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ... 140 9e-37
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ... 140 1e-36
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ... 138 5e-36
ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC ... 138 5e-36
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ... 138 7e-36
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ... 138 8e-36
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ... 134 2e-34
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 123 4e-30
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ... 120 1e-29
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 120 2e-29
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r... 118 6e-29
ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-... 118 7e-29
ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-... 118 1e-28
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-... 118 1e-28
ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-... 118 1e-28
>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
Length = 562
Score = 166 bits (420), Expect = 2e-46
Identities = 89/133 (66%), Positives = 99/133 (74%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
NDSVDNH+ KVF+ SG S +QE S TIS+D QQ KF RT
Sbjct: 197 NDSVDNHLGKVFVHSGKKELRKLRRKRTSDNESPT-IQESPSKTISKDLQQLKFAIAGRT 255
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
RSRNKRQK ARNEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQ
Sbjct: 256 PRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQ 315
Query: 41 HLYYGWHCRDELL 3
HL+YGWHCRDELL
Sbjct: 316 HLHYGWHCRDELL 328
>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
indicum]
Length = 388
Score = 161 bits (408), Expect = 6e-46
Identities = 89/133 (66%), Positives = 102/133 (76%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
NDSVDNHV +V ++SG S I QEL + TIS+ Q K+ S R
Sbjct: 26 NDSVDNHVGEV-VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRA 81
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRSRNKRQ+IARNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ
Sbjct: 82 SRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQ 141
Query: 41 HLYYGWHCRDELL 3
+L+YGWHCRDELL
Sbjct: 142 NLHYGWHCRDELL 154
>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
indicum]
Length = 556
Score = 161 bits (408), Expect = 1e-44
Identities = 89/133 (66%), Positives = 102/133 (76%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
NDSVDNHV +V ++SG S I QEL + TIS+ Q K+ S R
Sbjct: 194 NDSVDNHVGEV-VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRA 249
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRSRNKRQ+IARNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ
Sbjct: 250 SRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQ 309
Query: 41 HLYYGWHCRDELL 3
+L+YGWHCRDELL
Sbjct: 310 NLHYGWHCRDELL 322
>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
Length = 478
Score = 151 bits (382), Expect = 2e-41
Identities = 76/97 (78%), Positives = 84/97 (86%)
Frame = -3
Query: 293 LQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEE 114
+QE S TIS+D QQ KF RT RSRNKRQK ARNEA+MS+GVK VAELEK+RT LE+
Sbjct: 148 IQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQ 207
Query: 113 ETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCRDELL
Sbjct: 208 ETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELL 244
>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
Length = 551
Score = 140 bits (353), Expect = 9e-37
Identities = 72/133 (54%), Positives = 93/133 (69%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + + I D QQPKF S RT
Sbjct: 187 DDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRT 246
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ
Sbjct: 247 HASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQ 306
Query: 41 HLYYGWHCRDELL 3
HL++GW+CRDELL
Sbjct: 307 HLHFGWYCRDELL 319
>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
sylvestris]
Length = 554
Score = 140 bits (353), Expect = 9e-37
Identities = 72/133 (54%), Positives = 91/133 (68%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + I D QQPKF S RT
Sbjct: 190 DDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRT 249
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ
Sbjct: 250 HASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQH 309
Query: 41 HLYYGWHCRDELL 3
HL++GW+CRDELL
Sbjct: 310 HLHFGWYCRDELL 322
>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
sylvestris]
Length = 584
Score = 140 bits (353), Expect = 1e-36
Identities = 72/133 (54%), Positives = 91/133 (68%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + I D QQPKF S RT
Sbjct: 220 DDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRT 279
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ
Sbjct: 280 HASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQH 339
Query: 41 HLYYGWHCRDELL 3
HL++GW+CRDELL
Sbjct: 340 HLHFGWYCRDELL 352
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
tuberosum]
Length = 555
Score = 138 bits (348), Expect = 5e-36
Identities = 71/133 (53%), Positives = 92/133 (69%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + + I D QQPKF S RT
Sbjct: 191 DDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRT 250
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ
Sbjct: 251 QASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQ 310
Query: 41 HLYYGWHCRDELL 3
L++GW+CRDELL
Sbjct: 311 RLHFGWYCRDELL 323
>ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
tuberosum]
Length = 560
Score = 138 bits (348), Expect = 5e-36
Identities = 71/133 (53%), Positives = 92/133 (69%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + + I D QQPKF S RT
Sbjct: 196 DDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRT 255
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ
Sbjct: 256 QASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQ 315
Query: 41 HLYYGWHCRDELL 3
L++GW+CRDELL
Sbjct: 316 RLHFGWYCRDELL 328
>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
tomentosiformis]
Length = 560
Score = 138 bits (347), Expect = 7e-36
Identities = 71/130 (54%), Positives = 90/130 (69%)
Frame = -3
Query: 392 VDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRS 213
V N + KV ++S + I + + I D QQPKF S RT S
Sbjct: 199 VGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTS 258
Query: 212 RNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLY 33
RNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L+
Sbjct: 259 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLH 318
Query: 32 YGWHCRDELL 3
+GW+CRDELL
Sbjct: 319 FGWYCRDELL 328
>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
tomentosiformis]
Length = 572
Score = 138 bits (347), Expect = 8e-36
Identities = 71/130 (54%), Positives = 90/130 (69%)
Frame = -3
Query: 392 VDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRS 213
V N + KV ++S + I + + I D QQPKF S RT S
Sbjct: 211 VGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTS 270
Query: 212 RNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLY 33
RNKRQKIA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L+
Sbjct: 271 RNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLH 330
Query: 32 YGWHCRDELL 3
+GW+CRDELL
Sbjct: 331 FGWYCRDELL 340
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
Length = 551
Score = 134 bits (337), Expect = 2e-34
Identities = 70/133 (52%), Positives = 91/133 (68%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
+D V N + KV ++S + I + + I D QQ KF S RT
Sbjct: 187 DDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRT 246
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+A+ SSWA+AAGI++KELQQ
Sbjct: 247 HASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQ 306
Query: 41 HLYYGWHCRDELL 3
HL++GW+CRDELL
Sbjct: 307 HLHFGWYCRDELL 319
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 123 bits (308), Expect = 4e-30
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q + S+T+ FQ+PK S R S SR++R +IARNEAEMS GVK+VA LE++RT L
Sbjct: 517 ISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTL 576
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG+ ASLS WAEAAG+ +K LQQHL +GW+CRDELL
Sbjct: 577 EEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELL 615
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 120 bits (302), Expect = 1e-29
Identities = 65/133 (48%), Positives = 82/133 (61%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
N +VD+H+ KV ++SG IY L S TI + +P + RT
Sbjct: 196 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 255
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SR KR A+NEAEMS GVK+VA LE++R LEEE G +ASLS+WAEAAG+ KK LQQ
Sbjct: 256 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQ 315
Query: 41 HLYYGWHCRDELL 3
L +GW+CRDELL
Sbjct: 316 QLQFGWYCRDELL 328
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 120 bits (302), Expect = 2e-29
Identities = 65/133 (48%), Positives = 82/133 (61%)
Frame = -3
Query: 401 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRT 222
N +VD+H+ KV ++SG IY L S TI + +P + RT
Sbjct: 246 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 305
Query: 221 SRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQ 42
SR KR A+NEAEMS GVK+VA LE++R LEEE G +ASLS+WAEAAG+ KK LQQ
Sbjct: 306 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQ 365
Query: 41 HLYYGWHCRDELL 3
L +GW+CRDELL
Sbjct: 366 QLQFGWYCRDELL 378
>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
Length = 458
Score = 118 bits (295), Expect = 6e-29
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q L ++T+ +Q+PK SP R S SR +R +ARNE EMS GVK+VA LE++RT L
Sbjct: 127 ISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTL 186
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG++ SLS WAEAA + +K LQQHL+YGW+CRDEL+
Sbjct: 187 EEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELI 225
>ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X6
[Gossypium raimondii]
Length = 471
Score = 118 bits (295), Expect = 7e-29
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q L ++T+ +Q+PK SP R S SR +R +ARNE EMS GVK+VA LE++RT L
Sbjct: 127 ISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTL 186
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG++ SLS WAEAA + +K LQQHL+YGW+CRDEL+
Sbjct: 187 EEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELI 225
>ref|XP_012450466.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X5
[Gossypium raimondii]
Length = 547
Score = 118 bits (295), Expect = 1e-28
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q L ++T+ +Q+PK SP R S SR +R +ARNE EMS GVK+VA LE++RT L
Sbjct: 203 ISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTL 262
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG++ SLS WAEAA + +K LQQHL+YGW+CRDEL+
Sbjct: 263 EEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELI 301
>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
[Gossypium raimondii] gi|763798660|gb|KJB65615.1|
hypothetical protein B456_010G103500 [Gossypium
raimondii]
Length = 565
Score = 118 bits (295), Expect = 1e-28
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q L ++T+ +Q+PK SP R S SR +R +ARNE EMS GVK+VA LE++RT L
Sbjct: 234 ISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTL 293
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG++ SLS WAEAA + +K LQQHL+YGW+CRDEL+
Sbjct: 294 EEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELI 332
>ref|XP_012450464.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
[Gossypium raimondii]
Length = 576
Score = 118 bits (295), Expect = 1e-28
Identities = 58/99 (58%), Positives = 75/99 (75%)
Frame = -3
Query: 299 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 120
I Q L ++T+ +Q+PK SP R S SR +R +ARNE EMS GVK+VA LE++RT L
Sbjct: 232 ISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTL 291
Query: 119 EEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 3
EEETG++ SLS WAEAA + +K LQQHL+YGW+CRDEL+
Sbjct: 292 EEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELI 330