BLASTX nr result

ID: Rehmannia28_contig00014383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00014383
         (507 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015943116.1| PREDICTED: replication protein A 70 kDa DNA-...    39   6e-06
ref|XP_015943117.1| PREDICTED: replication protein A 70 kDa DNA-...    39   6e-06
ref|XP_015943118.1| PREDICTED: replication protein A 70 kDa DNA-...    39   6e-06

>ref|XP_015943116.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           isoform X1 [Arachis duranensis]
          Length = 532

 Score = 38.5 bits (88), Expect(3) = 6e-06
 Identities = 15/44 (34%), Positives = 30/44 (68%)
 Frame = +2

Query: 11  PVIIILQMCRAKKFREQIRVSNTFHVTKVIIDEEVDEINDFRRR 142
           P+I++LQ  R  ++ E+  V + F ++K+ I+ +++E+ DFR R
Sbjct: 201 PLIVVLQFFRPSRWNEKTSVQSHFDISKLRINPDLEEVRDFRDR 244



 Score = 34.7 bits (78), Expect(3) = 6e-06
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 404 GNFWISAKIIANESGMD-WWYIACTKCSKK 490
           G  WI+  I+A  SG D W+Y +C KC KK
Sbjct: 291 GPLWIAGTIVAINSGKDDWFYKSCRKCPKK 320



 Score = 22.7 bits (47), Expect(3) = 6e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 205 ISHISANNFTTITEELENSKDSFRTIEEIIETKE 306
           IS ++ NN  +  +EL+    +  TIEE + + +
Sbjct: 256 ISQVNTNNSHSGADELKRGDVTVNTIEEALNSTQ 289


>ref|XP_015943117.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           isoform X2 [Arachis duranensis]
          Length = 501

 Score = 38.5 bits (88), Expect(3) = 6e-06
 Identities = 15/44 (34%), Positives = 30/44 (68%)
 Frame = +2

Query: 11  PVIIILQMCRAKKFREQIRVSNTFHVTKVIIDEEVDEINDFRRR 142
           P+I++LQ  R  ++ E+  V + F ++K+ I+ +++E+ DFR R
Sbjct: 201 PLIVVLQFFRPSRWNEKTSVQSHFDISKLRINPDLEEVRDFRDR 244



 Score = 34.7 bits (78), Expect(3) = 6e-06
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 404 GNFWISAKIIANESGMD-WWYIACTKCSKK 490
           G  WI+  I+A  SG D W+Y +C KC KK
Sbjct: 291 GPLWIAGTIVAINSGKDDWFYKSCRKCPKK 320



 Score = 22.7 bits (47), Expect(3) = 6e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 205 ISHISANNFTTITEELENSKDSFRTIEEIIETKE 306
           IS ++ NN  +  +EL+    +  TIEE + + +
Sbjct: 256 ISQVNTNNSHSGADELKRGDVTVNTIEEALNSTQ 289


>ref|XP_015943118.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           isoform X3 [Arachis duranensis]
          Length = 439

 Score = 38.5 bits (88), Expect(3) = 6e-06
 Identities = 15/44 (34%), Positives = 30/44 (68%)
 Frame = +2

Query: 11  PVIIILQMCRAKKFREQIRVSNTFHVTKVIIDEEVDEINDFRRR 142
           P+I++LQ  R  ++ E+  V + F ++K+ I+ +++E+ DFR R
Sbjct: 108 PLIVVLQFFRPSRWNEKTSVQSHFDISKLRINPDLEEVRDFRDR 151



 Score = 34.7 bits (78), Expect(3) = 6e-06
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 404 GNFWISAKIIANESGMD-WWYIACTKCSKK 490
           G  WI+  I+A  SG D W+Y +C KC KK
Sbjct: 198 GPLWIAGTIVAINSGKDDWFYKSCRKCPKK 227



 Score = 22.7 bits (47), Expect(3) = 6e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 205 ISHISANNFTTITEELENSKDSFRTIEEIIETKE 306
           IS ++ NN  +  +EL+    +  TIEE + + +
Sbjct: 163 ISQVNTNNSHSGADELKRGDVTVNTIEEALNSTQ 196


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