BLASTX nr result

ID: Rehmannia28_contig00014351 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00014351
         (311 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101833.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    77   1e-14
ref|XP_012850240.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    65   2e-10
emb|CBI34828.3| unnamed protein product [Vitis vinifera]               52   9e-06

>ref|XP_011101833.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Sesamum
           indicum]
          Length = 309

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
 Frame = -2

Query: 310 CCFTTTI---------SKPTCPPLSVKQTHFSNSSISLKTKISPFKIVPFVAQTSDWAQQ 158
           CC  TT+         SKP CP +S++Q HFS+S IS K+KI  F+IVPFVAQTSDWAQQ
Sbjct: 14  CCCATTVPRTHATTFSSKPFCPSISLRQIHFSSSPISTKSKILRFRIVPFVAQTSDWAQQ 73

Query: 157 XXXXXXXXXXXXXXEVA-ETNATESFAW 77
                         +   E NAT+SF W
Sbjct: 74  EEEEEEKSGIEYESDEGIEANATDSFTW 101


>ref|XP_012850240.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
           [Erythranthe guttata] gi|604346373|gb|EYU44836.1|
           hypothetical protein MIMGU_mgv1a011418mg [Erythranthe
           guttata]
          Length = 282

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 6/57 (10%)
 Frame = -2

Query: 310 CCFTTTISKPT-----CPPLSVKQTHFS-NSSISLKTKISPFKIVPFVAQTSDWAQQ 158
           CC TTT+ K        P LS++Q +FS +SSISLK K S FKIVPFVAQTSDWAQQ
Sbjct: 14  CCSTTTVPKTNFAASISPSLSIRQINFSPHSSISLKPKNSSFKIVPFVAQTSDWAQQ 70


>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
 Frame = -2

Query: 304 FTTTISKP--TCPPLSVKQTHFS----NSSISLKTKISPFKIVPFVAQTSDWAQQ 158
           FTT    P  + PP  V+  H S    +S +SLKTK SP  +VPFVAQTSDWAQQ
Sbjct: 14  FTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDWAQQ 68


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