BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00014260
         (336 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...    61   1e-08
ref|XP_008809371.1| PREDICTED: uncharacterized protein LOC103721...    56   5e-07
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...    54   2e-06

>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 43/110 (39%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
 Frame = +2

Query: 8   QPSSTSPIRRSHRQRAAPHYLQVY-NYDLPPSISKGLXXXXXXXXXXXXXXGKPYCIXXX 184
           QPS++S   R  R R  P YLQ Y +Y LP + +                 G P+ I   
Sbjct: 110 QPSTSS---RPQRNRRPPSYLQDYQHYQLPAATNH---------------PGTPHSIFNC 151

Query: 185 XXXXXXXXXXXXFTA*ISHISEPKTYSQASKHLEWQQAMQAEITALEKNN 334
                       FT  IS   EPKTY QASK   W +AMQAEI ALE+NN
Sbjct: 152 ISYHNLSPQHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQNN 201


>ref|XP_008809371.1| PREDICTED: uncharacterized protein LOC103721098 [Phoenix
           dactylifera]
          Length = 274

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 40/112 (35%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
 Frame = +2

Query: 8   QPSSTSPIRRSHRQRAAPHYLQVYNYDL---PPSISKGLXXXXXXXXXXXXXXGKPYCIX 178
           QP     +RRS R R  P YLQ YN  L   PP                    GKPY I 
Sbjct: 64  QPIQNQSLRRSSRIRHPPSYLQEYNCSLVSRPPHSQ-----LVNQQSENSAKQGKPYDIS 118

Query: 179 XXXXXXXXXXXXXXFTA*ISHISEPKTYSQASKHLEWQQAMQAEITALEKNN 334
                         +   IS   +PKTY QASK +EWQ AM  ++ AL +NN
Sbjct: 119 HFLTYDKLSSSHRAYALSISSHVDPKTYGQASKSVEWQVAMDNKLRALIQNN 170


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 38/107 (35%), Positives = 52/107 (48%)
 Frame = +2

Query: 11   PSSTSPIRRSHRQRAAPHYLQVYNYDLPPSISKGLXXXXXXXXXXXXXXGKPYCIXXXXX 190
            P ++SP+RRS R R  P YLQ Y++ L  S S  L              G  Y I     
Sbjct: 794  PPNSSPLRRSTRLRNPPSYLQDYHHSLT-STSTNLHP------------GMLYPIEKYIS 840

Query: 191  XXXXXXXXXXFTA*ISHISEPKTYSQASKHLEWQQAMQAEITALEKN 331
                      F + IS +SEP +Y++A+KH  W +AM AE+ AL+ N
Sbjct: 841  YSRLSNDFQAFVSSISAVSEPHSYAEAAKHDCWLKAMHAELEALKMN 887