BLASTX nr result
ID: Rehmannia28_contig00013159
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00013159
(755 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081366.1| PREDICTED: RNA polymerase II subunit 5-media... 155 4e-42
ref|XP_012830772.1| PREDICTED: RNA polymerase II subunit 5-media... 135 1e-34
ref|XP_011081367.1| PREDICTED: RNA polymerase II subunit 5-media... 92 2e-18
ref|XP_015868371.1| PREDICTED: RNA polymerase II subunit 5-media... 69 4e-10
ref|XP_015868370.1| PREDICTED: RNA polymerase II subunit 5-media... 62 1e-07
ref|XP_015868369.1| PREDICTED: RNA polymerase II subunit 5-media... 60 4e-07
ref|XP_015869105.1| PREDICTED: uncharacterized protein LOC107406... 59 4e-07
ref|XP_015870765.1| PREDICTED: RNA polymerase II subunit 5-media... 59 1e-06
ref|XP_008227599.1| PREDICTED: RNA polymerase II subunit 5-media... 57 6e-06
ref|XP_011465596.1| PREDICTED: RNA polymerase II subunit 5-media... 57 7e-06
ref|XP_011465595.1| PREDICTED: RNA polymerase II subunit 5-media... 57 7e-06
ref|XP_004300695.1| PREDICTED: RNA polymerase II subunit 5-media... 57 7e-06
ref|XP_010656985.1| PREDICTED: RNA polymerase II subunit 5-media... 57 7e-06
>ref|XP_011081366.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Sesamum indicum]
gi|747069172|ref|XP_011081368.1| PREDICTED: RNA
polymerase II subunit 5-mediating protein homolog
isoform X1 [Sesamum indicum]
Length = 331
Score = 155 bits (391), Expect = 4e-42
Identities = 94/171 (54%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Frame = +3
Query: 3 GYENPDST-SLEVDNRKGADEDEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQNE 179
GY PD T SLE D RK + EDEEY + QNE
Sbjct: 164 GYGKPDPTFSLEKDARKFSVEDEEYNRIFSRIDELEKEEEEAEKGNESDEDE---RIQNE 220
Query: 180 ANSTISQNSMNQEVRSSPVEASDV------PGVSKDGSSHGDHIALNNSTMDKALELPQD 341
+S IS+ S +QEVRSSPV+ DV P VSKDGS H D+ LN STM KALELP++
Sbjct: 221 PDSNISEMSTHQEVRSSPVQVVDVAKAPEAPAVSKDGSLHCDYPPLNRSTMSKALELPEE 280
Query: 342 AKKVQTPLSSSNTAFTGSIVEHAHNIGMQLPEQKSGARSSKPVSRFKMQRK 494
KKVQ P S+SN AFTGSIVEHAHNIGM + EQ++GARSSKPVSRFKMQRK
Sbjct: 281 KKKVQAPPSTSNMAFTGSIVEHAHNIGMNMLEQQTGARSSKPVSRFKMQRK 331
>ref|XP_012830772.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Erythranthe guttata] gi|604344001|gb|EYU42818.1|
hypothetical protein MIMGU_mgv1a009983mg [Erythranthe
guttata]
Length = 325
Score = 135 bits (340), Expect = 1e-34
Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Frame = +3
Query: 3 GYENPDSTS-LEVDNRKGADEDEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQNE 179
G+ ++T +EV ++KGA EDEEY Q QNE
Sbjct: 164 GHTKSENTPFVEVGDKKGAYEDEEYIRLLARMAELEKEEEEAAKGDVSNENE---QIQNE 220
Query: 180 ANSTISQNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALNNSTMDKALELPQDAKKVQT 359
NST Q + ++EV S VEAS++P VSK+ SSHGD+ ALNNS M+ +LE P++ K+VQ
Sbjct: 221 PNSTSGQITTDEEVGSLSVEASEMPAVSKEVSSHGDYPALNNSMMNTSLEQPREKKEVQA 280
Query: 360 PLSSSNTAFTGSIVEHAHNIGMQLPEQKSGARSSKPVSRFKMQRK 494
P +++ TAFTGSIVE AH+I +PEQ+ G RSSKPVSRFKMQRK
Sbjct: 281 PPTANKTAFTGSIVERAHDIRTNMPEQQIGTRSSKPVSRFKMQRK 325
>ref|XP_011081367.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Sesamum indicum]
Length = 299
Score = 91.7 bits (226), Expect = 2e-18
Identities = 62/134 (46%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Frame = +3
Query: 3 GYENPDST-SLEVDNRKGADEDEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQNE 179
GY PD T SLE D RK + EDEEY + QNE
Sbjct: 164 GYGKPDPTFSLEKDARKFSVEDEEYNRIFSRIDELEKEEEEAEKGNESDEDE---RIQNE 220
Query: 180 ANSTISQNSMNQEVRSSPVEASDV------PGVSKDGSSHGDHIALNNSTMDKALELPQD 341
+S IS+ S +QEVRSSPV+ DV P VSKDGS H D+ LN STM KALELP++
Sbjct: 221 PDSNISEMSTHQEVRSSPVQVVDVAKAPEAPAVSKDGSLHCDYPPLNRSTMSKALELPEE 280
Query: 342 AKKVQTPLSSSNTA 383
KKVQ P S+SN A
Sbjct: 281 KKKVQAPPSTSNMA 294
>ref|XP_015868371.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X3 [Ziziphus jujuba]
Length = 384
Score = 69.3 bits (168), Expect = 4e-10
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +3
Query: 198 QNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALNNSTMDKALELPQDAKKVQTPLSSSN 377
+N+M++EV+S D S G+ N ST + +P + KVQ SS +
Sbjct: 288 KNTMSEEVKSRHHHHQDFTN-----RSQGNIFPGNVSTSSQKTLMPPEMDKVQAAASSRH 342
Query: 378 TAFTGSIVEHAHNIGMQLPEQ---KSGARSSKPVSRFKMQRK 494
AFTGSIVEH +N+ EQ KSG++ SKPVSRFKMQRK
Sbjct: 343 EAFTGSIVEHPYNLERNSSEQTVSKSGSQRSKPVSRFKMQRK 384
>ref|XP_015868370.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Ziziphus jujuba]
Length = 396
Score = 62.0 bits (149), Expect = 1e-07
Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Frame = +3
Query: 198 QNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALNNSTMDKALELPQDAKKVQTPLSS-- 371
+N+M++EV+S D S G+ N ST + +P + KVQ SS
Sbjct: 288 KNTMSEEVKSRHHHHQDFTN-----RSQGNIFPGNVSTSSQKTLMPPEMDKVQAAASSRH 342
Query: 372 ----------SNTAFTGSIVEHAHNIGMQLPEQ---KSGARSSKPVSRFKMQRK 494
S AFTGSIVEH +N+ EQ KSG++ SKPVSRFKMQRK
Sbjct: 343 ETSTSKAEFDSQKAFTGSIVEHPYNLERNSSEQTVSKSGSQRSKPVSRFKMQRK 396
>ref|XP_015868369.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Ziziphus jujuba]
Length = 400
Score = 60.5 bits (145), Expect = 4e-07
Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Frame = +3
Query: 198 QNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALNNSTMDKALELPQDAKKVQTPLSS-- 371
+N+M++EV+S D S G+ N ST + +P + KVQ SS
Sbjct: 288 KNTMSEEVKSRHHHHQDFTN-----RSQGNIFPGNVSTSSQKTLMPPEMDKVQAAASSRH 342
Query: 372 --------------SNTAFTGSIVEHAHNIGMQLPEQ---KSGARSSKPVSRFKMQRK 494
S AFTGSIVEH +N+ EQ KSG++ SKPVSRFKMQRK
Sbjct: 343 EPPLQTSTSKAEFDSQKAFTGSIVEHPYNLERNSSEQTVSKSGSQRSKPVSRFKMQRK 400
>ref|XP_015869105.1| PREDICTED: uncharacterized protein LOC107406490 [Ziziphus jujuba]
Length = 236
Score = 59.3 bits (142), Expect = 4e-07
Identities = 58/193 (30%), Positives = 76/193 (39%), Gaps = 35/193 (18%)
Frame = +3
Query: 21 STSLEVDNRKGADEDEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQNEANSTIS- 197
S+S E DN+ A EDEE+ + + + IS
Sbjct: 44 SSSPEADNKTNALEDEEFARIMSRMDELEKEELAAESYNETGEHEETDVSLDSFSDQISL 103
Query: 198 ---QNSMNQEVRSSPVEASDVPGVSKDGSSHGDH------------IALNNSTMDKALEL 332
+NS E R P +A +S++ S H N ST + +
Sbjct: 104 HQVKNSEEPEFRKPPDQAKYKNTMSEEVKSRHHHHQDFTNRPQGNIFPGNVSTSSQKTLM 163
Query: 333 PQDAKKVQTPLSS----------------SNTAFTGSIVEHAHNIGMQLPEQ---KSGAR 455
P + KVQ SS S AFTGSIVEH +N+ EQ KSG++
Sbjct: 164 PPEMDKVQAAASSRHEPPLQTSTSKPEFDSQKAFTGSIVEHPYNLERNSSEQTVSKSGSQ 223
Query: 456 SSKPVSRFKMQRK 494
SKPVSRFKMQRK
Sbjct: 224 RSKPVSRFKMQRK 236
>ref|XP_015870765.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Ziziphus jujuba]
Length = 400
Score = 59.3 bits (142), Expect = 1e-06
Identities = 58/193 (30%), Positives = 76/193 (39%), Gaps = 35/193 (18%)
Frame = +3
Query: 21 STSLEVDNRKGADEDEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQNEANSTIS- 197
S+S E DN+ A EDEE+ + + + IS
Sbjct: 208 SSSPEADNKTNALEDEEFARIMSRMDELEKEELAAESYNETGEHEETDVSLDSFSDQISL 267
Query: 198 ---QNSMNQEVRSSPVEASDVPGVSKDGSSHGDH------------IALNNSTMDKALEL 332
+NS E R P +A +S++ S H N ST + +
Sbjct: 268 HQVKNSEEPEFRKPPDQAKYKNTMSEEVKSRHHHHQDFTNRPQGNIFPGNVSTSSQKTLM 327
Query: 333 PQDAKKVQTPLSS----------------SNTAFTGSIVEHAHNIGMQLPEQ---KSGAR 455
P + KVQ SS S AFTGSIVEH +N+ EQ KSG++
Sbjct: 328 PPEMDKVQAAASSRHEPPLQTSTSKAEFDSQKAFTGSIVEHPYNLERNSSEQTVSKSGSQ 387
Query: 456 SSKPVSRFKMQRK 494
SKPVSRFKMQRK
Sbjct: 388 RSKPVSRFKMQRK 400
>ref|XP_008227599.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Prunus mume]
Length = 402
Score = 57.0 bits (136), Expect = 6e-06
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Frame = +3
Query: 165 QTQNEANSTISQNSMNQEVRSSPVEASDVPGVSK--DGSSHGDHIALN-NSTMDKALELP 335
Q + + + S++Q V+ S V ++K D SSHG+ +A + S+ KAL P
Sbjct: 270 QVEADLHQYSDHKSLHQNVKFSECLGLTVQPIAKVQDRSSHGNILACDVKSSSGKALVAP 329
Query: 336 QD--------AKKVQTPLSSSNT------AFTGSIVEHAHNIGMQLPEQ------KSGAR 455
Q ++ + PL SS AFTGSI+E HN EQ SG++
Sbjct: 330 QVHNAQAVHLSRSQEVPLQSSKPEFDGQKAFTGSIIERTHNQQTTSREQTTTTSQSSGSQ 389
Query: 456 SSKPVSRFKMQRK 494
KPVSRFKMQRK
Sbjct: 390 PPKPVSRFKMQRK 402
>ref|XP_011465596.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X3 [Fragaria vesca subsp. vesca]
Length = 349
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Frame = +3
Query: 165 QTQNEANSTISQNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALN-NSTMDKALELPQ- 338
Q++ T + N++ + S + +S D SHG+ +A N S +K P
Sbjct: 220 QSRKSPQQTKDGIASNKDSFTDEPSCSGLETISADKLSHGNILARNVKSVAEKDFVSPVV 279
Query: 339 ------DAKKVQTPLSSSNT------AFTGSIVEHAHNIGMQLPE------QKSGARSSK 464
+ + Q PL SS AFTGSIVEHA N+ ++ E Q S ++ SK
Sbjct: 280 ENFQTVPSSRSQVPLESSKPKFEREKAFTGSIVEHADNLQIKSRERTTATSQSSASQVSK 339
Query: 465 PVSRFKMQRK 494
PVSRFKMQRK
Sbjct: 340 PVSRFKMQRK 349
>ref|XP_011465595.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Fragaria vesca subsp. vesca]
Length = 368
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Frame = +3
Query: 165 QTQNEANSTISQNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALN-NSTMDKALELPQ- 338
Q++ T + N++ + S + +S D SHG+ +A N S +K P
Sbjct: 239 QSRKSPQQTKDGIASNKDSFTDEPSCSGLETISADKLSHGNILARNVKSVAEKDFVSPVV 298
Query: 339 ------DAKKVQTPLSSSNT------AFTGSIVEHAHNIGMQLPE------QKSGARSSK 464
+ + Q PL SS AFTGSIVEHA N+ ++ E Q S ++ SK
Sbjct: 299 ENFQTVPSSRSQVPLESSKPKFEREKAFTGSIVEHADNLQIKSRERTTATSQSSASQVSK 358
Query: 465 PVSRFKMQRK 494
PVSRFKMQRK
Sbjct: 359 PVSRFKMQRK 368
>ref|XP_004300695.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Fragaria vesca subsp. vesca]
Length = 369
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Frame = +3
Query: 165 QTQNEANSTISQNSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALN-NSTMDKALELPQ- 338
Q++ T + N++ + S + +S D SHG+ +A N S +K P
Sbjct: 240 QSRKSPQQTKDGIASNKDSFTDEPSCSGLETISADKLSHGNILARNVKSVAEKDFVSPVV 299
Query: 339 ------DAKKVQTPLSSSNT------AFTGSIVEHAHNIGMQLPE------QKSGARSSK 464
+ + Q PL SS AFTGSIVEHA N+ ++ E Q S ++ SK
Sbjct: 300 ENFQTVPSSRSQVPLESSKPKFEREKAFTGSIVEHADNLQIKSRERTTATSQSSASQVSK 359
Query: 465 PVSRFKMQRK 494
PVSRFKMQRK
Sbjct: 360 PVSRFKMQRK 369
>ref|XP_010656985.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Vitis vinifera]
Length = 383
Score = 56.6 bits (135), Expect = 7e-06
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 16/114 (14%)
Frame = +3
Query: 201 NSMNQEVRSSPVEASDVPGVSKDGSSHGDHIALNNSTMD--------KALELPQDAKKVQ 356
N + +++ ++ VP KD SHG A N +T +AL + VQ
Sbjct: 274 NQLKSKIQLEGLKEQSVP---KDDVSHGKSFA-NRATQSSSHGKDNIQALPTSKAETSVQ 329
Query: 357 T--PLSSSNTAFTGSIVEHAHNIGMQLPE------QKSGARSSKPVSRFKMQRK 494
+ P + S AFTGSIVEH NI M E Q SG++ +KPVSRFKMQR+
Sbjct: 330 SSKPATDSLKAFTGSIVEHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQRR 383