BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00013041
         (2204 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088114.1| PREDICTED: regulator of nonsense transcripts...   601   0.0  
ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts...   594   0.0  
ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts...   589   0.0  
ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts...   584   0.0  
ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts...   533   e-180
emb|CDO97628.1| unnamed protein product [Coffea canephora]            518   e-174
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   511   e-171
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts...   505   e-169
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts...   503   e-168
ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts...   490   e-164
ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts...   491   e-164
ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts...   489   e-163
ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts...   484   e-161
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   482   e-160
ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts...   478   e-159
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   473   e-156
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   471   e-156
ref|XP_009775092.1| PREDICTED: regulator of nonsense transcripts...   472   e-156
ref|XP_015062249.1| PREDICTED: regulator of nonsense transcripts...   470   e-156
gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cy...   472   e-156

>ref|XP_011088114.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
            indicum]
          Length = 515

 Score =  601 bits (1550), Expect = 0.0
 Identities = 338/506 (66%), Positives = 356/506 (70%), Gaps = 16/506 (3%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQSNLVE VDSRF GRY WLVFRPGKSS KH  YSRAYIDFNKPEDVIEFAEFFNGHV
Sbjct: 18   TISQSNLVEHVDSRFVGRYLWLVFRPGKSSLKHPKYSRAYIDFNKPEDVIEFAEFFNGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKG+QFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEF+AKP+ENLPSAEI
Sbjct: 78   FVNEKGSQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFLAKPIENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLERKEAERAGAPKD PIVTPLMDYVRQ          ++LNGK  RR SG SSRNP+  
Sbjct: 138  QLERKEAERAGAPKDVPIVTPLMDYVRQRRAAKGGARRSMLNGKQARRASGVSSRNPISG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRDSSKIV S D S+  LV KQDDQ+ +     SAA+S N + 
Sbjct: 198  SSKRGSDKRRASTTMYVLRDSSKIVSSIDSSSNSLVPKQDDQKSV-----SAAMSRNVSS 252

Query: 716  EGE---SGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRRE 886
             GE   SG T                  NVSGGS LQQNAA PAKTS   A PK NQ+RE
Sbjct: 253  PGESGVSGFTEIGKKKILLLKGKEKEISNVSGGSFLQQNAATPAKTSQTSALPKLNQQRE 312

Query: 887  ASGRIIRSILLTRDTR--QPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPED 1060
             SGRIIRSILL RDTR  QPSS  Q ELR Q+SNQDR+K+PPRPP++Q  QKDTNGAPED
Sbjct: 313  GSGRIIRSILLNRDTRQNQPSSRSQLELRIQSSNQDREKKPPRPPTVQLSQKDTNGAPED 372

Query: 1061 KVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE 1240
            KVV NDL AV  EKQERRTRNKDRPDRGVWTPLRR                        E
Sbjct: 373  KVVPNDLPAVHMEKQERRTRNKDRPDRGVWTPLRR---SDGSHGSDDSLSSASQVLDSAE 429

Query: 1241 GTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-X 1393
            GTHVE KH+MLV RG        GRG HYS DNGSYRHGGRRGSAYN KDAD SS  E  
Sbjct: 430  GTHVEKKHEMLVARGSEYRPSGSGRGSHYSVDNGSYRHGGRRGSAYNVKDADVSSNVEGK 489

Query: 1394 XXXXXXXXXXXXHEKQVWVQKSSSGT 1471
                        HEKQVWVQKSSSGT
Sbjct: 490  SLKRGASSGYGSHEKQVWVQKSSSGT 515


>ref|XP_011092289.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Sesamum
            indicum] gi|747089317|ref|XP_011092290.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like [Sesamum
            indicum] gi|747089319|ref|XP_011092291.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like [Sesamum
            indicum]
          Length = 518

 Score =  594 bits (1532), Expect = 0.0
 Identities = 329/505 (65%), Positives = 355/505 (70%), Gaps = 15/505 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQSNL + VDSRFSGRY W  FRPGKSS KHL+YSRAYIDFN+PEDV+EFAEFFNGHV
Sbjct: 18   TISQSNLFDHVDSRFSGRYRWSAFRPGKSSQKHLTYSRAYIDFNRPEDVLEFAEFFNGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFK IVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEF+AKPVENLPSAEI
Sbjct: 78   FVNEKGTQFKAIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-X 538
            QLERKEAERAGAPKD PIVTPLMDYVRQ          T+LNGK TRRV G SSR+PV  
Sbjct: 138  QLERKEAERAGAPKDVPIVTPLMDYVRQKRAAKGGARRTMLNGKSTRRVGGISSRSPVSG 197

Query: 539  XXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE 718
                         MYVLRDSSK   SK+K TYLLV KQDDQQL +KS N AAVS  +ALE
Sbjct: 198  SSKRGSEKRKTSTMYVLRDSSKGASSKEKPTYLLVPKQDDQQLTEKSANLAAVSRTDALE 257

Query: 719  ---GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
               G SGST                  NVSGGS LQQNAA PAK+S + AP +QNQRRE 
Sbjct: 258  LESGGSGSTGIAKKKILLLKGKEKEISNVSGGSSLQQNAATPAKSSQSSAPSRQNQRRET 317

Query: 890  SGRIIRSILLTRDTR--QPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDK 1063
            SGRIIRSILL +D R  QP    QSE R   SNQ+RDK+PPR PS+Q  QK+TNG PEDK
Sbjct: 318  SGRIIRSILLNKDNRQNQPLPVSQSEPRIHNSNQERDKKPPRSPSIQLLQKETNGIPEDK 377

Query: 1064 VVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEG 1243
            VVSNDLHAV TEKQ+RR RNKDRPDRGVWTPLRR                          
Sbjct: 378  VVSNDLHAVHTEKQDRRMRNKDRPDRGVWTPLRRSDGSHASDDSLSSSASRASQVLDPA- 436

Query: 1244 THVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XX 1396
               ++K++MLV RG        GRGGHYS DNGS+RH GRR SAYN KD DGSS+ E   
Sbjct: 437  --EDVKNEMLVARGGEYRQIGSGRGGHYSVDNGSFRH-GRRSSAYNIKDVDGSSVLEGKP 493

Query: 1397 XXXXXXXXXXXHEKQVWVQKSSSGT 1471
                       HEKQVWVQKSSSG+
Sbjct: 494  SRRGGSSGYGPHEKQVWVQKSSSGS 518


>ref|XP_012850387.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Erythranthe guttata] gi|604313123|gb|EYU26454.1|
            hypothetical protein MIMGU_mgv1a004529mg [Erythranthe
            guttata]
          Length = 521

 Score =  589 bits (1518), Expect = 0.0
 Identities = 327/506 (64%), Positives = 351/506 (69%), Gaps = 16/506 (3%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQSNLVE VDSRFSGRY WL FRPGKSSP+   YSRAYIDFN PEDVIEFAEFFNGH+
Sbjct: 18   TISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDFNTPEDVIEFAEFFNGHI 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFK IVEYAPSQRVPKQWSKKDGR+GT+LKDPEYLEFLEFIAKPV NLPSAEI
Sbjct: 78   FVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLEFLEFIAKPVVNLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLERKEAERAGAPK+ P+VTPLMDY+RQ          TVLNGKP RRV GT SRN V  
Sbjct: 138  QLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARRTVLNGKPARRVGGTPSRNLVSG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRD+SKIV SK+ S Y L+ KQDDQQL+DKS NS AVSGNEAL
Sbjct: 198  SSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQQLVDKSFNSTAVSGNEAL 257

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXP--NVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
            EGE G +                    N SG SLL QNA  P+KTSH  A  KQN RR+A
Sbjct: 258  EGERGGSGSIGTGKKVLLLKGKEKEIFNASGSSLLHQNAETPSKTSHISASSKQNPRRDA 317

Query: 890  SGRIIRSILLTRDTR--QPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDK 1063
            SGRIIRSILL RDT   QP +G QSELR Q   QD+DKRPPRPPS+Q  QKDTNGA E K
Sbjct: 318  SGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDKDKRPPRPPSMQLLQKDTNGASEGK 377

Query: 1064 VVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXE 1240
            +V NDL+AVPTEKQERRT+NKDRPDRGVW PLRR                         E
Sbjct: 378  IVHNDLYAVPTEKQERRTKNKDRPDRGVWAPLRRSDGSHASDDSLSSSGSQTSQVVDPAE 437

Query: 1241 GTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-X 1393
            GT VE KHDM V RG        GRG +YSADNGSYR  GRRGSAY  KDADG S  E  
Sbjct: 438  GTRVERKHDMPVARGGDYRSTGSGRGNNYSADNGSYR--GRRGSAYIVKDADGYSTVEGK 495

Query: 1394 XXXXXXXXXXXXHEKQVWVQKSSSGT 1471
                        +EK+VWVQKS SG+
Sbjct: 496  PLKKVGASVYGPNEKRVWVQKSGSGS 521


>ref|XP_012850385.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Erythranthe guttata] gi|604313122|gb|EYU26453.1|
            hypothetical protein MIMGU_mgv1a004529mg [Erythranthe
            guttata]
          Length = 522

 Score =  584 bits (1506), Expect = 0.0
 Identities = 327/507 (64%), Positives = 351/507 (69%), Gaps = 17/507 (3%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQSNLVE VDSRFSGRY WL FRPGKSSP+   YSRAYIDFN PEDVIEFAEFFNGH+
Sbjct: 18   TISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDFNTPEDVIEFAEFFNGHI 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFK IVEYAPSQRVPKQWSKKDGR+GT+LKDPEYLEFLEFIAKPV NLPSAEI
Sbjct: 78   FVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLEFLEFIAKPVVNLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQ-XXXXXXXXXXTVLNGKPTRRVSGTSSRNPV- 535
            QLERKEAERAGAPK+ P+VTPLMDY+RQ           TVLNGKP RRV GT SRN V 
Sbjct: 138  QLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARQRTVLNGKPARRVGGTPSRNLVS 197

Query: 536  -XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEA 712
                           MYVLRD+SKIV SK+ S Y L+ KQDDQQL+DKS NS AVSGNEA
Sbjct: 198  GSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQQLVDKSFNSTAVSGNEA 257

Query: 713  LEGESGSTXXXXXXXXXXXXXXXXXP--NVSGGSLLQQNAAIPAKTSHNPAPPKQNQRRE 886
            LEGE G +                    N SG SLL QNA  P+KTSH  A  KQN RR+
Sbjct: 258  LEGERGGSGSIGTGKKVLLLKGKEKEIFNASGSSLLHQNAETPSKTSHISASSKQNPRRD 317

Query: 887  ASGRIIRSILLTRDTR--QPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPED 1060
            ASGRIIRSILL RDT   QP +G QSELR Q   QD+DKRPPRPPS+Q  QKDTNGA E 
Sbjct: 318  ASGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDKDKRPPRPPSMQLLQKDTNGASEG 377

Query: 1061 KVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXX 1237
            K+V NDL+AVPTEKQERRT+NKDRPDRGVW PLRR                         
Sbjct: 378  KIVHNDLYAVPTEKQERRTKNKDRPDRGVWAPLRRSDGSHASDDSLSSSGSQTSQVVDPA 437

Query: 1238 EGTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE- 1390
            EGT VE KHDM V RG        GRG +YSADNGSYR  GRRGSAY  KDADG S  E 
Sbjct: 438  EGTRVERKHDMPVARGGDYRSTGSGRGNNYSADNGSYR--GRRGSAYIVKDADGYSTVEG 495

Query: 1391 XXXXXXXXXXXXXHEKQVWVQKSSSGT 1471
                         +EK+VWVQKS SG+
Sbjct: 496  KPLKKVGASVYGPNEKRVWVQKSGSGS 522


>ref|XP_012842321.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Erythranthe
            guttata]
          Length = 507

 Score =  533 bits (1374), Expect = e-180
 Identities = 305/506 (60%), Positives = 342/506 (67%), Gaps = 16/506 (3%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQSNL E VDSRFSGRYH + FRPG  S KHL++SRAYI+FN+PEDVIEFAEFFNGHV
Sbjct: 18   TISQSNLAEHVDSRFSGRYHCIAFRPGNPSQKHLTHSRAYINFNRPEDVIEFAEFFNGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKG QFK IVEYAPSQR+PKQWSKKDGREGTILKDPEYLEFLE +AKPVENLPSAEI
Sbjct: 78   FVNEKGAQFKAIVEYAPSQRIPKQWSKKDGREGTILKDPEYLEFLELLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLERKEA R GAPK  P+VTPLM+YVRQ          TVLNGK TR V+G SSR+P+  
Sbjct: 138  QLERKEAARVGAPKVPPVVTPLMEYVRQQRAAKGGARRTVLNGKSTRGVTGISSRSPISG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYV+RD SK VGSKDK+ YLLV KQDDQQL  KS N AAVSG + L
Sbjct: 198  SSKRGSGKRRTSTTMYVVRDGSKGVGSKDKTPYLLVPKQDDQQL--KSANLAAVSGTDPL 255

Query: 716  EGES---GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRRE 886
            EGES   GS+                  NVSG S LQQNAA PAK  H+ AP +QNQRRE
Sbjct: 256  EGESGEPGSSGIGKKKILLLKGNEKEISNVSGASSLQQNAASPAKNLHSSAPFRQNQRRE 315

Query: 887  ASGRIIRSILLTRDTR--QPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPED 1060
              GRIIR+ILL +DTR  QP  G Q ELR+Q+SNQDRDKRPPRPPS+QSF K+ +G  ED
Sbjct: 316  TGGRIIRTILLNKDTRQNQPPVGSQ-ELRTQSSNQDRDKRPPRPPSVQSFLKERDGFLED 374

Query: 1061 KVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXE 1240
            KVV        +EKQERRT+   +PDRGVWTPLRR                         
Sbjct: 375  KVVI-------SEKQERRTK---KPDRGVWTPLRRSDGSHASDDSLSSSASQNSQTL--- 421

Query: 1241 GTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-X 1393
             +  ++K +ML  RG        GRG H S DNGSYRHGGRRGSAYN KD DGSS+ +  
Sbjct: 422  DSAEDLKIEMLSVRGGDQRYVGSGRGSHSSVDNGSYRHGGRRGSAYNMKDTDGSSVVDAK 481

Query: 1394 XXXXXXXXXXXXHEKQVWVQKSSSGT 1471
                        +EK+VWVQKSSSG+
Sbjct: 482  FSKRGGGSGYGSNEKRVWVQKSSSGS 507


>emb|CDO97628.1| unnamed protein product [Coffea canephora]
          Length = 517

 Score =  518 bits (1333), Expect = e-174
 Identities = 291/504 (57%), Positives = 337/504 (66%), Gaps = 14/504 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            +ISQS+L++QV++RFSGRY+W+ FRPGK+S K  SYSRAYIDF +PEDVIEFAEFF+GHV
Sbjct: 18   SISQSSLMDQVETRFSGRYNWVSFRPGKTSQKRQSYSRAYIDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKT+VEY PSQRVPKQWSKKDGREGTILKDPEYLEFLEF+AKPVENLPSAEI
Sbjct: 78   FVNEKGTQFKTVVEYGPSQRVPKQWSKKDGREGTILKDPEYLEFLEFLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP--V 535
            QLERKEAERAG  K+  IVTPLMD+VRQ          +  NGK  RRVSG S   P   
Sbjct: 138  QLERKEAERAGVTKEAAIVTPLMDFVRQKRAAKSGTRRSASNGKSNRRVSGASIGGPSSS 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MY+LRD++K    KDKSTY+LV KQDDQ L DKSV SAA  GN  L
Sbjct: 198  SSKRGSEKRRMSTTMYILRDNAKATSGKDKSTYILVPKQDDQHLSDKSVTSAAACGNGEL 257

Query: 716  E---GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRRE 886
            E   G+SG T                 P++SGGS +QQ+ A P K   + A  KQNQRRE
Sbjct: 258  EEESGDSGPTDSGKKKILLLKGKEKEIPHMSGGSPVQQSTASPFKNPPSSA-LKQNQRRE 316

Query: 887  ASGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKV 1066
            ASG+IIRSILL  + +   S  +S+ ++QT N +RDKRPPRPPS+Q  QKD N A +DK 
Sbjct: 317  ASGKIIRSILLKDNRQNQPSSVRSDQQNQTVNLERDKRPPRPPSVQLLQKDANVASDDK- 375

Query: 1067 VSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGT 1246
            V ND+H + +EKQE+RTRNKDRPDR VWTPLRR                        EGT
Sbjct: 376  VPNDIHNIHSEKQEKRTRNKDRPDRVVWTPLRR-SDGSHTSDESLSSSASQSAVDATEGT 434

Query: 1247 HVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXX 1399
             +EMK DM   RG        GRG   S DNGSYRHGGRRGSA+  KD+DGSS+ +    
Sbjct: 435  QLEMKSDMSSARGGEFRHGGSGRGSQSSTDNGSYRHGGRRGSAH-VKDSDGSSLVDGKPL 493

Query: 1400 XXXXXXXXXXHEKQVWVQKSSSGT 1471
                      HEKQVWVQKSSSG+
Sbjct: 494  RRGGSSGFGSHEKQVWVQKSSSGS 517


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
            product [Vitis vinifera]
          Length = 519

 Score =  511 bits (1315), Expect = e-171
 Identities = 280/502 (55%), Positives = 329/502 (65%), Gaps = 13/502 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TIS++  +EQ+D+ F GRY  + FRPGK+S K  SYSRAY+DF +PEDVIEFAEFF+GHV
Sbjct: 18   TISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTI KDPEY+EF+E +AKPVENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLER+EAERAGA KD PIVTPLMD+VRQ          ++ NGK +RR SG+SS NP   
Sbjct: 138  QLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRD++K   +KDKST++LV K+DDQ L DKSVN AA  G EAL
Sbjct: 198  SSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEAL 257

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASG 895
            E ESG +                   +S   LLQQN   P K       PKQNQRRE SG
Sbjct: 258  EEESGVSGAVDAGKKKVLLLKGKEREIS-HHLLQQNVTSPVKNILGANAPKQNQRREGSG 316

Query: 896  RIIRSILLTRDTRQPSSGP-QSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVS 1072
            RIIRSILL +D RQ  S   Q+E +SQ SN +++KRPPRPP +Q   K+TNGA +DKVV 
Sbjct: 317  RIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVG 376

Query: 1073 NDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGTHV 1252
            ND+H+  +EKQ++RTRNKDRPDRGVWTPLRR                        EG+H 
Sbjct: 377  NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHG 436

Query: 1253 EMKHDMLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXX 1402
            EM+ DM   R         GRGGH + DNGS++H GRRG  ++ KDADGSSI        
Sbjct: 437  EMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSK 496

Query: 1403 XXXXXXXXXHEKQVWVQKSSSG 1468
                     HEKQVWVQKSSSG
Sbjct: 497  RGSAPGYGSHEKQVWVQKSSSG 518


>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 515

 Score =  505 bits (1301), Expect = e-169
 Identities = 277/502 (55%), Positives = 326/502 (64%), Gaps = 13/502 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TIS++  +EQ+D+ F GRY  + FRPGK+S K  SYSRAY+DF +PEDVIEFAEFF+GHV
Sbjct: 18   TISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTI KDPEY+EF+E +AKPVENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLER+EAERAGA KD PIVTPLMD+VRQ          ++ NGK +RR SG+SS NP   
Sbjct: 138  QLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRD++K   +KDKST++LV K+DDQ L DKSVN AA  G EAL
Sbjct: 198  SSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEAL 257

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASG 895
            E ESG +                   +S      QN   P K       PKQNQRRE SG
Sbjct: 258  EEESGVSGAVDAGKKKVLLLKGKEREIS-----HQNVTSPVKNILGANAPKQNQRREGSG 312

Query: 896  RIIRSILLTRDTRQPSSGP-QSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVS 1072
            RIIRSILL +D RQ  S   Q+E +SQ SN +++KRPPRPP +Q   K+TNGA +DKVV 
Sbjct: 313  RIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVG 372

Query: 1073 NDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGTHV 1252
            ND+H+  +EKQ++RTRNKDRPDRGVWTPLRR                        EG+H 
Sbjct: 373  NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHG 432

Query: 1253 EMKHDMLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXX 1402
            EM+ DM   R         GRGGH + DNGS++H GRRG  ++ KDADGSSI        
Sbjct: 433  EMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSK 492

Query: 1403 XXXXXXXXXHEKQVWVQKSSSG 1468
                     HEKQVWVQKSSSG
Sbjct: 493  RGSAPGYGSHEKQVWVQKSSSG 514


>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 514

 Score =  503 bits (1295), Expect = e-168
 Identities = 276/502 (54%), Positives = 325/502 (64%), Gaps = 13/502 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TIS++  +EQ+D+ F GRY  + FRPGK+S K  SYSRAY+DF +PEDVIEFAEFF+GHV
Sbjct: 18   TISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQR+PK W KKDGREGTI KDPEY+EF+E +AKPVENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPV-- 535
            QLER+EAERAGA KD PIVTPLMD+VRQ          ++ NGK +RR SG+SS NP   
Sbjct: 138  QLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLG 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRD++K   +KDKST++LV K+DDQ L DKSVN AA  G EAL
Sbjct: 198  SSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEAL 257

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASG 895
            E ESG +                   +S       N   P K       PKQNQRRE SG
Sbjct: 258  EEESGVSGAVDAGKKKVLLLKGKEREIS------HNVTSPVKNILGANAPKQNQRREGSG 311

Query: 896  RIIRSILLTRDTRQPSSGP-QSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVS 1072
            RIIRSILL +D RQ  S   Q+E +SQ SN +++KRPPRPP +Q   K+TNGA +DKVV 
Sbjct: 312  RIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVG 371

Query: 1073 NDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGTHV 1252
            ND+H+  +EKQ++RTRNKDRPDRGVWTPLRR                        EG+H 
Sbjct: 372  NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHG 431

Query: 1253 EMKHDMLVTR--------GGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE--XXXX 1402
            EM+ DM   R         GRGGH + DNGS++H GRRG  ++ KDADGSSI        
Sbjct: 432  EMRSDMSNARSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSK 491

Query: 1403 XXXXXXXXXHEKQVWVQKSSSG 1468
                     HEKQVWVQKSSSG
Sbjct: 492  RGSAPGYGSHEKQVWVQKSSSG 513


>ref|XP_009587163.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
            tomentosiformis]
          Length = 469

 Score =  490 bits (1262), Expect = e-164
 Identities = 282/495 (56%), Positives = 319/495 (64%), Gaps = 5/495 (1%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            T+SQS L+EQVDSRF+GRY+W  FRPGK+S KH SYSR YIDF   EDVIEFAEFF+GHV
Sbjct: 16   TLSQSTLLEQVDSRFAGRYNWFTFRPGKTSLKHQSYSRVYIDFRNTEDVIEFAEFFDGHV 75

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQRVPK WSKKD RE TILKDPEYLEFLEF+AKPVENLPSAEI
Sbjct: 76   FVNEKGTQFKTIVEYAPSQRVPKHWSKKDAREATILKDPEYLEFLEFLAKPVENLPSAEI 135

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP-VX 538
            QLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+ T+RV GTSSR P   
Sbjct: 136  QLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSLSNGRSTKRVGGTSSRTPSSA 195

Query: 539  XXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE 718
                         MYVLRDSSK    KDKS Y+LV K+DDQQL DKS  SA  SG + +E
Sbjct: 196  ASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQLSDKSGTSAPGSGIDLVE 254

Query: 719  GESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
            GE G   +                  PNVSGGSL QQN A   K S + + PKQNQR+EA
Sbjct: 255  GEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVASTLKNSPSSSAPKQNQRQEA 314

Query: 890  SGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVV 1069
            SG+IIRSILL +D RQ  S  QSEL+     QD+DKRPPRPPS+Q FQKDT+GA EDKV 
Sbjct: 315  SGKIIRSILL-KDARQNQSASQSELQI----QDKDKRPPRPPSMQLFQKDTSGANEDKVA 369

Query: 1070 SNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGTH 1249
             NDLH V  EKQERR+RN+DRPDRGVW PLRR                        + + 
Sbjct: 370  GNDLHVVHIEKQERRSRNRDRPDRGVWAPLRR-----------------------ADSSQ 406

Query: 1250 VEMKHDMLVTRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXX 1429
               +    V             G+Y+HG RRG     +DADG S+ E             
Sbjct: 407  ASNEQSSQVR--------DFVEGNYKHGSRRG----LRDADGPSVGEGKPVRRGGTSAYN 454

Query: 1430 H-EKQVWVQKSSSGT 1471
              EKQVWVQKSSSG+
Sbjct: 455  SLEKQVWVQKSSSGS 469


>ref|XP_009587503.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Nicotiana tomentosiformis]
          Length = 508

 Score =  491 bits (1264), Expect = e-164
 Identities = 283/503 (56%), Positives = 328/503 (65%), Gaps = 13/503 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQS LVEQV SRF+GRY+W  FRPGKSS KH +YSRAY+DF +PEDVIEFAEFF+GHV
Sbjct: 18   TISQSMLVEQVLSRFTGRYNWFSFRPGKSSQKHQTYSRAYVDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQR PK+WSKKDGREGTILKDPEYLEFLEFIAKP+ENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLEFLEFIAKPIENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP--V 535
            QLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+PTRR +GTSS +P   
Sbjct: 138  QLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSLSNGRPTRRANGTSSGSPSSS 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRDSSK    KDK  ++LV K+DDQQ  +KS  SA  SG +A+
Sbjct: 198  AFKQGSEKRRVSTTMYVLRDSSKAGSGKDK-RHILVPKRDDQQQAEKSGTSAPGSGADAV 256

Query: 716  EGES-GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREAS 892
            E E+ G+                  PNVS GSL+Q NAA   K +   + P+QNQRREAS
Sbjct: 257  EEETGGAADVGKKKILLLKGKEREIPNVSSGSLIQDNAAPIVKNTITSSAPQQNQRREAS 316

Query: 893  GRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVS 1072
            G+IIRSILL +D RQ +  P +  + Q S QD+DK+PPRPPS+Q FQK+ NG  EDK+V 
Sbjct: 317  GKIIRSILL-KDARQ-NQAPSASQQEQHS-QDKDKKPPRPPSVQLFQKEINGVNEDKIVG 373

Query: 1073 NDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXEGTH 1249
             DLH V TEKQERR+R +DRPDRGVWTPLRR                         EG+ 
Sbjct: 374  TDLHVVHTEKQERRSRIRDRPDRGVWTPLRRADSLHASDESLSSSTSQSSEVLDSLEGSQ 433

Query: 1250 VEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXXX 1402
             E K+D+   RG        GR  H S DNG+Y+  G R         DG S+ E     
Sbjct: 434  GETKNDLPNVRGGEFRPMGSGRNSHSSFDNGTYKRRGMRD--------DGISVGEGKPLR 485

Query: 1403 XXXXXXXXXHEKQVWVQKSSSGT 1471
                     HEKQVWVQKSSSGT
Sbjct: 486  RGGPSNYGTHEKQVWVQKSSSGT 508


>ref|XP_009786002.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana
            sylvestris]
          Length = 469

 Score =  489 bits (1258), Expect = e-163
 Identities = 281/495 (56%), Positives = 318/495 (64%), Gaps = 5/495 (1%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            T+SQS L+EQVDSRF+GRY+W  FRPGK+S KH SYSRAYIDF   EDVIEFAEFF+GHV
Sbjct: 16   TLSQSTLLEQVDSRFAGRYNWFTFRPGKTSLKHQSYSRAYIDFRNTEDVIEFAEFFDGHV 75

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQRVPK WSKKD RE TILKDPEYLEFLEF+AKPVENLPSAEI
Sbjct: 76   FVNEKGTQFKTIVEYAPSQRVPKHWSKKDAREATILKDPEYLEFLEFLAKPVENLPSAEI 135

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP-VX 538
            QLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+ T+RV GTSSR P   
Sbjct: 136  QLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSISNGRSTKRVGGTSSRTPSSA 195

Query: 539  XXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE 718
                         MYVLRDSSK    KDKS Y+LV K+DDQQL DKS  SA  SG + +E
Sbjct: 196  ASKRGSEKRTSTTMYVLRDSSKAGNGKDKS-YILVPKRDDQQLSDKSRTSAPGSGIDLVE 254

Query: 719  GESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
            GE G   +                  PNVSGGSL QQN A   K S + + PKQNQR+EA
Sbjct: 255  GEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVASTLKNSPSSSAPKQNQRQEA 314

Query: 890  SGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVV 1069
            SGRIIRSILL +D RQ  S  QSE +     QD+DKRPPRPPS+Q FQKDT+GA EDK  
Sbjct: 315  SGRIIRSILL-KDARQNQSASQSEHQI----QDKDKRPPRPPSMQLFQKDTSGANEDKAA 369

Query: 1070 SNDLHAVPTEKQERRTRNKDRPDRGVWTPLRRXXXXXXXXXXXXXXXXXXXXXXXXEGTH 1249
             NDLH V  EKQERR+RN+DRPDRGVW PLRR                        + + 
Sbjct: 370  GNDLHVVHVEKQERRSRNRDRPDRGVWAPLRR-----------------------ADSSQ 406

Query: 1250 VEMKHDMLVTRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXXXXXXXXXX 1429
               +    V             G+Y+HG RRG     +DADG S+ +             
Sbjct: 407  ASNEQSSQVR--------DFVEGNYKHGSRRG----LRDADGPSVGDGKPVRRGGTSAYS 454

Query: 1430 H-EKQVWVQKSSSGT 1471
              EKQVWVQKSSSG+
Sbjct: 455  SLEKQVWVQKSSSGS 469


>ref|XP_009587502.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Nicotiana tomentosiformis]
          Length = 517

 Score =  484 bits (1247), Expect = e-161
 Identities = 283/512 (55%), Positives = 328/512 (64%), Gaps = 22/512 (4%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSP---------KHLSYSRAYIDFNKPEDVIE 154
            TISQS LVEQV SRF+GRY+W  FRPGKS P         KH +YSRAY+DF +PEDVIE
Sbjct: 18   TISQSMLVEQVLSRFTGRYNWFSFRPGKSRPSPQIFSCSQKHQTYSRAYVDFKRPEDVIE 77

Query: 155  FAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKP 334
            FAEFF+GHVFVNEKGTQFKTIVEYAPSQR PK+WSKKDGREGTILKDPEYLEFLEFIAKP
Sbjct: 78   FAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLEFLEFIAKP 137

Query: 335  VENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSG 514
            +ENLPSAEIQLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+PTRR +G
Sbjct: 138  IENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSLSNGRPTRRANG 197

Query: 515  TSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNS 688
            TSS +P                 MYVLRDSSK    KDK  ++LV K+DDQQ  +KS  S
Sbjct: 198  TSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDK-RHILVPKRDDQQQAEKSGTS 256

Query: 689  AAVSGNEALEGES-GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPP 865
            A  SG +A+E E+ G+                  PNVS GSL+Q NAA   K +   + P
Sbjct: 257  APGSGADAVEEETGGAADVGKKKILLLKGKEREIPNVSSGSLIQDNAAPIVKNTITSSAP 316

Query: 866  KQNQRREASGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTN 1045
            +QNQRREASG+IIRSILL +D RQ +  P +  + Q S QD+DK+PPRPPS+Q FQK+ N
Sbjct: 317  QQNQRREASGKIIRSILL-KDARQ-NQAPSASQQEQHS-QDKDKKPPRPPSVQLFQKEIN 373

Query: 1046 GAPEDKVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXX 1222
            G  EDK+V  DLH V TEKQERR+R +DRPDRGVWTPLRR                    
Sbjct: 374  GVNEDKIVGTDLHVVHTEKQERRSRIRDRPDRGVWTPLRRADSLHASDESLSSSTSQSSE 433

Query: 1223 XXXXXEGTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGS 1378
                 EG+  E K+D+   RG        GR  H S DNG+Y+  G R         DG 
Sbjct: 434  VLDSLEGSQGETKNDLPNVRGGEFRPMGSGRNSHSSFDNGTYKRRGMRD--------DGI 485

Query: 1379 SIAE-XXXXXXXXXXXXXHEKQVWVQKSSSGT 1471
            S+ E              HEKQVWVQKSSSGT
Sbjct: 486  SVGEGKPLRRGGPSNYGTHEKQVWVQKSSSGT 517


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X1 [Solanum tuberosum]
            gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X1 [Solanum
            tuberosum]
          Length = 508

 Score =  482 bits (1240), Expect = e-160
 Identities = 280/504 (55%), Positives = 324/504 (64%), Gaps = 14/504 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            T+SQS L+E VDSRF+GRY+W  FRP K+S KH SYS+AYIDF   EDV EFAEFF+GH+
Sbjct: 16   TLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDVTEFAEFFDGHM 75

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQRVPK W KKD REGTILKDP Y+EFLEF+AKPVENLPSAEI
Sbjct: 76   FVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLAKPVENLPSAEI 135

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP-VX 538
            QLERKEAERAG+ KD PIVTPLMDYVRQ          ++ NGK ++ V GTSSR+P   
Sbjct: 136  QLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSVGGTSSRSPSST 195

Query: 539  XXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE 718
                         MYV RDSSK   SKDKS Y+L+ K+ DQQL  KS +SA  S  + +E
Sbjct: 196  ASRRGSEKRTSTTMYVQRDSSKAGNSKDKS-YILLPKRGDQQLSVKSGSSAPGSEIDVVE 254

Query: 719  GESG---STXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
            GE G   +                  PNVSGGSL QQN +   K S + +  KQNQR+EA
Sbjct: 255  GEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEA 314

Query: 890  SGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVV 1069
            SGRIIRSILL +D RQ  S  QS+       QD+D RPPRPPS+Q FQKDT+GA EDKVV
Sbjct: 315  SGRIIRSILL-KDARQNQSAFQSD-----QIQDKDMRPPRPPSMQLFQKDTSGANEDKVV 368

Query: 1070 SNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXEGT 1246
             N+ H V  EKQERR+RN+DRPDRGVW PLRR                         EG 
Sbjct: 369  GNEKHVVHIEKQERRSRNRDRPDRGVWAPLRRADSSQASNGSLSSGIPQSSQVREFVEGG 428

Query: 1247 HVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXX 1402
              E+K+D+ + RG        GR  H SADNG+Y+HGGRRG     +D  G+SI E    
Sbjct: 429  QGELKNDLPIARGTEFRPIGSGRNSHSSADNGNYKHGGRRG----LRDVAGTSIGEGKPV 484

Query: 1403 XXXXXXXXXH-EKQVWVQKSSSGT 1471
                       EKQVWVQKSSSG+
Sbjct: 485  KKGGTSAYSSLEKQVWVQKSSSGS 508


>ref|XP_009775100.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Nicotiana sylvestris]
          Length = 508

 Score =  478 bits (1231), Expect = e-159
 Identities = 278/503 (55%), Positives = 322/503 (64%), Gaps = 13/503 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQS LVEQV SRF+GRY+W  FRPGKSS KH +YSRAY+DF +PEDVIEFAEFF+GHV
Sbjct: 18   TISQSMLVEQVVSRFTGRYNWFSFRPGKSSQKHQTYSRAYVDFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQR PK+WSKKDGREGTILKDPEYLEFLEFIAKP+ENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLEFLEFIAKPIENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP--V 535
            QLERKEAERAG+ K+ PIVTPLMDY+RQ          ++ NG+PTRRV GTSS +P   
Sbjct: 138  QLERKEAERAGSAKNAPIVTPLMDYIRQKRAAKSGARKSLSNGRPTRRVDGTSSGSPSSS 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRDSSK    KDK  ++LV  +D QQ  +KS  SA  SG +A+
Sbjct: 198  AFKQGSEKRRVSTTMYVLRDSSKAGSGKDK-RHVLVPNRDGQQQAEKSGTSAPGSGADAV 256

Query: 716  EGES-GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREAS 892
            E E+ G+                  PNVS GS++Q NAA   K +   + P+QNQRREAS
Sbjct: 257  EEETGGAADAGKKKILLLKGKEKEIPNVSSGSVIQGNAAPIVKNTITSSAPQQNQRREAS 316

Query: 893  GRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVS 1072
            G+IIRSILL  D  Q  +   S  + +  +QD+DK+PPRPPS+Q FQK+ NG  EDKVV 
Sbjct: 317  GKIIRSILL-EDAHQNQA--LSASQQEQHSQDKDKKPPRPPSVQLFQKEINGVNEDKVVG 373

Query: 1073 NDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXEGTH 1249
             DL  V TEKQERR+R +DRPDRGVWTPLRR                         EGT 
Sbjct: 374  TDLRVVHTEKQERRSRIRDRPDRGVWTPLRRSDRLHASDESMSSSTSQSSEVLDSLEGTQ 433

Query: 1250 VEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXXX 1402
             E K+D+   RG        GR  H S DNG+Y+  G R         DG S+ E     
Sbjct: 434  GETKNDLPNVRGGEFRPMGSGRNSHSSFDNGTYKRRGMRD--------DGISVGEGKPLR 485

Query: 1403 XXXXXXXXXHEKQVWVQKSSSGT 1471
                     HEKQVWVQKSSSGT
Sbjct: 486  RGGPSNYGTHEKQVWVQKSSSGT 508


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  473 bits (1216), Expect = e-156
 Identities = 263/499 (52%), Positives = 313/499 (62%), Gaps = 13/499 (2%)
 Frame = +2

Query: 5    ISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHVF 184
            ISQ   VEQ+D  FSGRY+WL +RPG +S KH SYSRAYIDF +PEDVI+FAEFFNGH+F
Sbjct: 21   ISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPEDVIDFAEFFNGHIF 80

Query: 185  VNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEIQ 364
            VNEKGTQFK IVEY+PSQRVPKQWSKKDGREGTI KDPEYLEFLE IAKPVENLPSAEIQ
Sbjct: 81   VNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIAKPVENLPSAEIQ 140

Query: 365  LERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNPVXXX 544
            LER+EAERAGA KD PIVTPLMD+VRQ           + NGK +RR  G+ S +     
Sbjct: 141  LERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRRAGGSGSPSSSSLK 200

Query: 545  XXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALEGE 724
                       MYVLRD++K    KDKSTY+ V K+DDQQL   +V   + SG   LE E
Sbjct: 201  RGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQL-SNAVTLGSGSGTAVLEDE 259

Query: 725  SGSTXXXXXXXXXXXXXXXXXPNVS--GGSLLQQNAAIPAKTSHNPAPPKQNQRREASGR 898
            S  +                   +S   G++ QQ +   +  +   +   ++QRRE SGR
Sbjct: 260  SVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGR 319

Query: 899  IIRSILLTRDTRQ-PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVVSN 1075
            +IRSILL +D+R   SSG  SE + QTSN +++KRPPRPP  Q   KD NG P+DKVV N
Sbjct: 320  MIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGN 379

Query: 1076 DLHAVPTEKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXXEGTH 1249
            DLH  P EKQE+RTRNKDRPDRGVWTPLRR                          +G H
Sbjct: 380  DLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNH 439

Query: 1250 VEMKHDML--------VTRGGRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAEXXXXX 1405
             ++K D L        V   GRG H S DNGS++H GRRG ++  +DADGS++       
Sbjct: 440  GDVKVDSLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKR 499

Query: 1406 XXXXXXXXHEKQVWVQKSS 1462
                    HEKQVWVQKS+
Sbjct: 500  GGSSGYGSHEKQVWVQKST 518


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3 [Solanum tuberosum]
          Length = 483

 Score =  471 bits (1212), Expect = e-156
 Identities = 276/504 (54%), Positives = 319/504 (63%), Gaps = 14/504 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQS L++QVDSRF+GRY+W  F PGKSS KH +YSRAYI+F  PEDVIEFAEFF+GHV
Sbjct: 18   TISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEFKMPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQRVPK WSKKDGREGTILKDPEYLEFLEFI+KP+ENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLEFLEFISKPIENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP--V 535
            QLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+PTRR SGTS+ +P   
Sbjct: 138  QLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRTSGTSTGSPSSS 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRDSSK    KDK TY+L  K+DDQQ  +KS  SAA S   A+
Sbjct: 198  ASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAAGSVANAV 256

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASG 895
            E E+G                       G + + +   +  K   NP     NQRREASG
Sbjct: 257  EEETG-----------------------GAADVGKKKILLLKEKENP----NNQRREASG 289

Query: 896  RIIRSILL--TRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVV 1069
            RIIRSILL   R  + PS+  Q + R      D+DK+PPRPPS+Q FQ++TNGA EDKV+
Sbjct: 290  RIIRSILLKDARQNQAPSASQQDKHR-----VDKDKKPPRPPSVQLFQRETNGANEDKVL 344

Query: 1070 SNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXEGT 1246
              DLH V TEKQE+RTR +DRPDRGVWTPLRR                         EG+
Sbjct: 345  GADLHIVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSEVPDFVEGS 404

Query: 1247 HVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XXX 1399
              E KH +   RG        GR  + S DNG+Y+HGGRRG     +D DG S+ E    
Sbjct: 405  QGETKHGLANARGAEFRPMGSGRNSYSSFDNGTYKHGGRRG----MRD-DGISVGEGKPL 459

Query: 1400 XXXXXXXXXXHEKQVWVQKSSSGT 1471
                      HEKQVWVQKSSSGT
Sbjct: 460  RRGGPSSYGTHEKQVWVQKSSSGT 483


>ref|XP_009775092.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Nicotiana sylvestris]
          Length = 517

 Score =  472 bits (1214), Expect = e-156
 Identities = 278/512 (54%), Positives = 322/512 (62%), Gaps = 22/512 (4%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSP---------KHLSYSRAYIDFNKPEDVIE 154
            TISQS LVEQV SRF+GRY+W  FRPGKS P         KH +YSRAY+DF +PEDVIE
Sbjct: 18   TISQSMLVEQVVSRFTGRYNWFSFRPGKSRPSPQIFSCSQKHQTYSRAYVDFKRPEDVIE 77

Query: 155  FAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKP 334
            FAEFF+GHVFVNEKGTQFKTIVEYAPSQR PK+WSKKDGREGTILKDPEYLEFLEFIAKP
Sbjct: 78   FAEFFDGHVFVNEKGTQFKTIVEYAPSQRAPKRWSKKDGREGTILKDPEYLEFLEFIAKP 137

Query: 335  VENLPSAEIQLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSG 514
            +ENLPSAEIQLERKEAERAG+ K+ PIVTPLMDY+RQ          ++ NG+PTRRV G
Sbjct: 138  IENLPSAEIQLERKEAERAGSAKNAPIVTPLMDYIRQKRAAKSGARKSLSNGRPTRRVDG 197

Query: 515  TSSRNP--VXXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNS 688
            TSS +P                 MYVLRDSSK    KDK  ++LV  +D QQ  +KS  S
Sbjct: 198  TSSGSPSSSAFKQGSEKRRVSTTMYVLRDSSKAGSGKDK-RHVLVPNRDGQQQAEKSGTS 256

Query: 689  AAVSGNEALEGES-GSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPP 865
            A  SG +A+E E+ G+                  PNVS GS++Q NAA   K +   + P
Sbjct: 257  APGSGADAVEEETGGAADAGKKKILLLKGKEKEIPNVSSGSVIQGNAAPIVKNTITSSAP 316

Query: 866  KQNQRREASGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTN 1045
            +QNQRREASG+IIRSILL  D  Q  +   S  + +  +QD+DK+PPRPPS+Q FQK+ N
Sbjct: 317  QQNQRREASGKIIRSILL-EDAHQNQA--LSASQQEQHSQDKDKKPPRPPSVQLFQKEIN 373

Query: 1046 GAPEDKVVSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXX 1222
            G  EDKVV  DL  V TEKQERR+R +DRPDRGVWTPLRR                    
Sbjct: 374  GVNEDKVVGTDLRVVHTEKQERRSRIRDRPDRGVWTPLRRSDRLHASDESMSSSTSQSSE 433

Query: 1223 XXXXXEGTHVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGS 1378
                 EGT  E K+D+   RG        GR  H S DNG+Y+  G R         DG 
Sbjct: 434  VLDSLEGTQGETKNDLPNVRGGEFRPMGSGRNSHSSFDNGTYKRRGMRD--------DGI 485

Query: 1379 SIAE-XXXXXXXXXXXXXHEKQVWVQKSSSGT 1471
            S+ E              HEKQVWVQKSSSGT
Sbjct: 486  SVGEGKPLRRGGPSNYGTHEKQVWVQKSSSGT 517


>ref|XP_015062249.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
            pennellii]
          Length = 485

 Score =  470 bits (1210), Expect = e-156
 Identities = 277/505 (54%), Positives = 322/505 (63%), Gaps = 15/505 (2%)
 Frame = +2

Query: 2    TISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHV 181
            TISQS L++QVDSRF+GRY+W  F PGKSS KH +YSRAYI+F +PEDVIEFAEFF+GHV
Sbjct: 18   TISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEFKRPEDVIEFAEFFDGHV 77

Query: 182  FVNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEI 361
            FVNEKGTQFKTIVEYAPSQRVP+ WSKKDGREGTILKDPEYLEFLEFI+KP+ENLPSAEI
Sbjct: 78   FVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLEFLEFISKPIENLPSAEI 137

Query: 362  QLERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSGTSSRNP--V 535
            QLERKEAERAG+ KD PIVTPLMDY+RQ          ++ NG+PTRR SGTS+ +P   
Sbjct: 138  QLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRASGTSAGSPSSS 197

Query: 536  XXXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEAL 715
                          MYVLRDSSK    KDK TY+L  K+DDQQ  +KS  SA VS   A+
Sbjct: 198  ASKRSSEKRRASTSMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAPVSVANAV 256

Query: 716  EGESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREASG 895
            E E+G                    +V    +L     +  K   NP     NQRREASG
Sbjct: 257  EEETGGA-----------------ADVGKKKIL----LLKEKEKENP----NNQRREASG 291

Query: 896  RIIRSILLTRDTRQ---PSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKV 1066
            RIIRSILL +D RQ   PS+  Q + R      D+DK+PPRPPS+Q F ++TNGA ED+V
Sbjct: 292  RIIRSILL-KDARQNQVPSASQQEKHR-----VDKDKKPPRPPSVQLFHRETNGANEDRV 345

Query: 1067 VSNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR-XXXXXXXXXXXXXXXXXXXXXXXXEG 1243
            +  DLH V TEKQE+RTR +DRPDRGVWTPLRR                         EG
Sbjct: 346  LGADLHVVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDESLSSSASQSSEVPDFVEG 405

Query: 1244 THVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGSSIAE-XX 1396
            +  E KH ++  RG        GR  H S DNG+Y+HGGRRG     +D DG S+ E   
Sbjct: 406  SPGETKHGLINARGAEFRPMGSGRNSHSSFDNGTYKHGGRRG----MRD-DGISVGEGKP 460

Query: 1397 XXXXXXXXXXXHEKQVWVQKSSSGT 1471
                       HEKQVWVQKSSSGT
Sbjct: 461  LRRGGPSSYNTHEKQVWVQKSSSGT 485


>gb|KVI11060.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
            var. scolymus]
          Length = 556

 Score =  472 bits (1215), Expect = e-156
 Identities = 262/473 (55%), Positives = 313/473 (66%), Gaps = 15/473 (3%)
 Frame = +2

Query: 5    ISQSNLVEQVDSRFSGRYHWLVFRPGKSSPKHLSYSRAYIDFNKPEDVIEFAEFFNGHVF 184
            ISQS L+EQ+D+RF GRY+W  FR GK+S K  SYSR YIDF  PEDVIEFAEFF+GHVF
Sbjct: 19   ISQSALMEQIDARFCGRYNWFCFRSGKNSLKCQSYSRLYIDFKHPEDVIEFAEFFDGHVF 78

Query: 185  VNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEIQ 364
            VNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTI KDPEYL+FLE +AKPVENLPSAEIQ
Sbjct: 79   VNEKGTQFKTIVEYAPSQRVPKQWSKKDGREGTIEKDPEYLQFLELLAKPVENLPSAEIQ 138

Query: 365  LERKEAERAGAPKDDPIVTPLMDYVRQXXXXXXXXXXTVLNGKPTRRVSG--TSSRNPVX 538
            LERKEAERAG  K+ PIVTPLMD+VRQ          ++ NGK TRR SG  +SS +   
Sbjct: 139  LERKEAERAGTAKEAPIVTPLMDFVRQKRAAKGGPRRSLPNGKLTRRASGASSSSSSSTP 198

Query: 539  XXXXXXXXXXXXXMYVLRDSSKIVGSKDKSTYLLVHKQDDQQLIDKSVNSAAVSGNEALE 718
                         MYV RD+ K    K+KSTY+ V K+DDQ L +KSV S A SG+  LE
Sbjct: 199  LKRGSERRRTSTTMYVPRDTGKGRSGKEKSTYIQVQKRDDQSLSEKSVGSYAASGSVVLE 258

Query: 719  ---GESGSTXXXXXXXXXXXXXXXXXPNVSGGSLLQQNAAIPAKTSHNPAPPKQNQRREA 889
               G SG+                  P+++ G L  Q +++  K SH     KQNQ+REA
Sbjct: 259  EGRGSSGTPDIGKKKILLLKGKEKEIPHMTTG-LSPQQSSLSVKLSHGSGALKQNQQREA 317

Query: 890  SGRIIRSILLTRDTRQPSSGPQSELRSQTSNQDRDKRPPRPPSLQSFQKDTNGAPEDKVV 1069
            SGRIIRSILL +DT+Q     QSE ++QTS++  D+RPPRPP++    KD+NG P+D V 
Sbjct: 318  SGRIIRSILLNKDTQQ----NQSEQQNQTSSRVMDRRPPRPPNVPPPLKDSNGLPDDMVA 373

Query: 1070 SNDLHAVPTEKQERRTRNKDRPDRGVWTPLRR--XXXXXXXXXXXXXXXXXXXXXXXXEG 1243
             +DLH   +EKQ++RTRN+DRPDRGVWTPLRR                          EG
Sbjct: 374  GHDLHGFYSEKQDKRTRNRDRPDRGVWTPLRRSDGSHASDESLSSSTSQSTQMQPDSAEG 433

Query: 1244 THVEMKHDMLVTRG--------GRGGHYSADNGSYRHGGRRGSAYNFKDADGS 1378
            TH E+K D+   RG        GRGGH+S DNGS++HGGRRG ++N KDADGS
Sbjct: 434  THGEVKSDLSNARGGDFKTIGSGRGGHFSVDNGSHKHGGRRGPSHNAKDADGS 486