BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00008775
         (2197 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein...   687   0.0  
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe...   633   0.0  
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra...   588   0.0  
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       556   0.0  
emb|CDO99584.1| unnamed protein product [Coffea canephora]            551   0.0  
ref|XP_006347073.1| PREDICTED: protein RTF1 homolog [Solanum tub...   547   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   546   0.0  
ref|XP_015065731.1| PREDICTED: protein RTF1 homolog [Solanum pen...   545   0.0  
ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein...   533   e-178
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein...   533   e-178
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   520   e-173
ref|XP_015574623.1| PREDICTED: protein RTF1 homolog [Ricinus com...   516   e-172
gb|KYP53243.1| RNA polymerase-associated protein RTF1 isogeny [C...   511   e-170
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   509   e-169
ref|XP_003529309.1| PREDICTED: protein RTF1 homolog [Glycine max...   509   e-169
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   509   e-169
gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glyc...   509   e-169
ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Zi...   508   e-169
ref|XP_003542767.1| PREDICTED: protein RTF1 homolog [Glycine max...   509   e-169
gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glyc...   508   e-168

>ref|XP_011096256.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sesamum
            indicum]
          Length = 627

 Score =  687 bits (1772), Expect = 0.0
 Identities = 367/479 (76%), Positives = 386/479 (80%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLEKLLLEAAGRTT                                   RAYPNRKPS
Sbjct: 1    MADLEKLLLEAAGRTTASGRNRHSSPPSRRRRKGSYSDDGSDSKNDDSDGDRAYPNRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTE 1298
            GSQVPLKKRLDP DRDDDRSSQEG               SVGSDLYKDEDDREKL++LTE
Sbjct: 61   GSQVPLKKRLDPADRDDDRSSQEGDEDDDYDHERDSDNDSVGSDLYKDEDDREKLSKLTE 120

Query: 1297 LEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSKAERAGALDELVKXX 1118
            LEREMILEARATKRSDRDL EK KKRKGQDRKGSPPKAHTRNMRSKAERAGALDELVK  
Sbjct: 121  LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAHTRNMRSKAERAGALDELVKRR 180

Query: 1117 XXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXXXXXXXXXXXGMADSDDDKMASES 938
                      RYSPVKRRSFTAATL                      MADSDDDK  SES
Sbjct: 181  RDAAKGGSGSRYSPVKRRSFTAATLSSPSRSESGSHSDGESTGDGG-MADSDDDK-TSES 238

Query: 937  KVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVDSS 758
            KVPT+EDI+EITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD++
Sbjct: 239  KVPTYEDIREITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVDAT 298

Query: 757  DPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVERNGGHMP 578
            DPD+QYKLDNKTT+KYLNVVWGNE+SAARWQMAMISDS P KEEFDQWVREVER+GGHMP
Sbjct: 299  DPDKQYKLDNKTTYKYLNVVWGNETSAARWQMAMISDSPPTKEEFDQWVREVERSGGHMP 358

Query: 577  TKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEIAKEND 398
            TKQEVLEKKEAI+KTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALE+AKEN+
Sbjct: 359  TKQEVLEKKEAIQKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEVAKENE 418

Query: 397  DETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNTSLKAG 221
            DE EV+R+K+RL+ELEASRQ QEKDSKA+KLAEMNRRNRVENF+NASELKPVNTSLKAG
Sbjct: 419  DEAEVERLKARLQELEASRQPQEKDSKAVKLAEMNRRNRVENFRNASELKPVNTSLKAG 477



 Score = 84.0 bits (206), Expect = 3e-13
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA LQKFGGPQGAQAGFMARKQ+IEA  GVKVPEND
Sbjct: 564 HNFELPISLAALQKFGGPQGAQAGFMARKQRIEATLGVKVPEND 607


>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttata]
          Length = 623

 Score =  633 bits (1632), Expect = 0.0
 Identities = 341/485 (70%), Positives = 375/485 (77%), Gaps = 6/485 (1%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLEKLLLEAAGRTTT                                  R Y NRKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSGRNRHSSPPSRRRRKGSYSDDGSDSKNEESDGDRGYTNRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTE 1298
            GSQVPLKKRLD TDRD+DRSSQEG                VGSDLYKDEDDREKL++LTE
Sbjct: 61   GSQVPLKKRLDATDRDEDRSSQEGDEDEYDHDRDSDNDS-VGSDLYKDEDDREKLSKLTE 119

Query: 1297 LEREMILEARATKRSDRDLHEKFKKRKGQDRKGS-PPKAHTRNMRSKAERAGALDELVKX 1121
            LEREMILEARATKRSDRDL EK KKRKGQDRKGS PPK HTRNMRSKA+RAGALDELVK 
Sbjct: 120  LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVKR 179

Query: 1120 XXXXXXXXXXXRYSPVKRRSFTAAT-----LXXXXXXXXXXXXXXXXXXXXXGMADSDDD 956
                       RYSPVKRRSF AA      L                     G+ DSDDD
Sbjct: 180  RRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDD 239

Query: 955  KMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVV 776
            K++S  KVPTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG IYRLCVV
Sbjct: 240  KVSS--KVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVV 297

Query: 775  RNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVER 596
            RNVD++DPDR+YKLDNKTT K+LNVVWG+ESSAARWQMAM+SDS P +EEFDQWV+EVER
Sbjct: 298  RNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVER 357

Query: 595  NGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALE 416
            NGGHMPTKQEV+EK++AI++TN+FVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRR+LE
Sbjct: 358  NGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRSLE 417

Query: 415  IAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNT 236
            +AKEN+D+ EV+RIK+RL+ELE+SRQ  EK+SKA+KLAEMNR+NRVENFKNASE+KPV  
Sbjct: 418  VAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTI 477

Query: 235  SLKAG 221
             LKAG
Sbjct: 478  GLKAG 482



 Score = 84.0 bits (206), Expect = 3e-13
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLAVLQKFGGPQG QAGFMARKQ+IEA  GVKVPEND
Sbjct: 560 HNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPEND 603


>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
          Length = 606

 Score =  588 bits (1516), Expect = 0.0
 Identities = 324/485 (66%), Positives = 358/485 (73%), Gaps = 6/485 (1%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLEKLLLEAAGRTTT                                  R Y NRKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSGRNRHSSPPSRRRRKGSYSDDGSDSKNEESDGDRGYTNRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTE 1298
            GSQVPLKKRLD TDRD+DRSSQEG                VGSDLYKDEDDREKL++LTE
Sbjct: 61   GSQVPLKKRLDATDRDEDRSSQEGDEDEYDHDRDSDNDS-VGSDLYKDEDDREKLSKLTE 119

Query: 1297 LEREMILEARATKRSDRDLHEKFKKRKGQDRKGS-PPKAHTRNMRSKAERAGALDELVKX 1121
            LEREMILEARATKRSDRDL EK KKRKGQDRKGS PPK HTRNMRSKA+RAGALDELVK 
Sbjct: 120  LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVKR 179

Query: 1120 XXXXXXXXXXXRYSPVKRRSFTAAT-----LXXXXXXXXXXXXXXXXXXXXXGMADSDDD 956
                       RYSPVKRRSF AA      L                     G+ DSDDD
Sbjct: 180  RRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDD 239

Query: 955  KMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVV 776
            K++S  KVPTFEDIKEITIRRSKL+KWFMEPFFDELIVGCFVRVGIGKSRSG IYRLCVV
Sbjct: 240  KVSS--KVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVV 297

Query: 775  RNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVER 596
            RNVD++DPDR+YKLDNKTT K+LNVVWG+ESSAARWQMAM+SDS P +EEFDQWV+EVER
Sbjct: 298  RNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVER 357

Query: 595  NGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALE 416
            NGGHMPTKQEV+EK++AI++TN+FVYSAATVKQMLQEKK                 R+LE
Sbjct: 358  NGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKK-----------------RSLE 400

Query: 415  IAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNT 236
            +AKEN+D+ EV+RIK+RL+ELE+SRQ  EK+SKA+KLAEMNR+NRVENFKNASE+KPV  
Sbjct: 401  VAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTI 460

Query: 235  SLKAG 221
             LKAG
Sbjct: 461  GLKAG 465



 Score = 84.0 bits (206), Expect = 3e-13
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLAVLQKFGGPQG QAGFMARKQ+IEA  GVKVPEND
Sbjct: 543 HNFELPISLAVLQKFGGPQGTQAGFMARKQRIEATLGVKVPEND 586


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  556 bits (1434), Expect = 0.0
 Identities = 303/481 (62%), Positives = 347/481 (72%), Gaps = 2/481 (0%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLEKLLLEAAGRTTT                                    Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTE 1298
             SQVPLKKR DPTDRDD RSSQ+G                +GSDLYKDE+DREKL++LTE
Sbjct: 58   SSQVPLKKRFDPTDRDD-RSSQDGDEINSNHERDSDNDT-IGSDLYKDEEDREKLSKLTE 115

Query: 1297 LEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNM-RSKAERAGALDELVKX 1121
            LEREMILE RATK SDRDL EK KKRKG D+K SP KAHTR+  RSKAERAGALDELVK 
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175

Query: 1120 XXXXXXXXXXXR-YSPVKRRSFTAATLXXXXXXXXXXXXXXXXXXXXXGMADSDDDKMAS 944
                         YSPVKRRSFTAATL                     G+ DSD+DK  S
Sbjct: 176  RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235

Query: 943  ESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 764
            +S VPTF+DIKEIT++RSKL KWFMEPFFDELI+GCFV+VGIGKSRSG +YRLCVVRNVD
Sbjct: 236  QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295

Query: 763  SSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVERNGGH 584
            SSDP R Y  +N+ THKYL++VWG+ESSAARWQM MIS+  P +EEFD W +EVER GG+
Sbjct: 296  SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355

Query: 583  MPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEIAKE 404
            MPT+QEV EK+EA+++ N FVYSAATVKQM+QEKKSAT +P+NVA EKDRLRRA+E+A+E
Sbjct: 356  MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415

Query: 403  NDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNTSLKA 224
            NDD  E++ I+ +L ELE+SR+V EKDSKA KLAEMN +NR  NFKNASE+KPVNTSLKA
Sbjct: 416  NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475

Query: 223  G 221
            G
Sbjct: 476  G 476



 Score = 77.8 bits (190), Expect = 3e-11
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+FELPISLA LQ+ GGPQGAQAG MARKQ IEA YGVKVPEND
Sbjct: 547 HDFELPISLAALQRLGGPQGAQAGLMARKQWIEANYGVKVPEND 590


>emb|CDO99584.1| unnamed protein product [Coffea canephora]
          Length = 631

 Score =  551 bits (1421), Expect = 0.0
 Identities = 297/447 (66%), Positives = 336/447 (75%), Gaps = 20/447 (4%)
 Frame = -1

Query: 1501 AYPNRKPSGSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDR 1322
            AY NRKPSGSQVPLKKRLDP +RD+D S+ E                SVGSDLYKDEDDR
Sbjct: 47   AYSNRKPSGSQVPLKKRLDPLERDEDDSNHE----EDGYHEGDSDDDSVGSDLYKDEDDR 102

Query: 1321 EKLAQLTELEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK---AER 1151
            +KLAQ++EL+REMIL  RA+ RSDR++HEKF K+    RKGSP + H+R +RS    A+R
Sbjct: 103  KKLAQMSELQREMILADRASTRSDREMHEKFAKK----RKGSPTQTHSRAVRSSTRFADR 158

Query: 1150 AGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXX 1022
              A D+ +                 K             YSPVKRR FTAAT+       
Sbjct: 159  TAAKDDALNEIRAKRMRQQDPEAHRKLRDATRDGSGSRGYSPVKRRPFTAATIGSPTRSG 218

Query: 1021 XXXXXXXXXXXXXXGMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIV 842
                          GMADSD+DK ++ESK PT+EDIKEITIRRSKLAKWFMEPFF++LIV
Sbjct: 219  SASHSDEEESTGDGGMADSDEDKTSAESKWPTYEDIKEITIRRSKLAKWFMEPFFEDLIV 278

Query: 841  GCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQM 662
            GCFVRVGIGK+R GPIYRLCVVRNVD SDPDR YKLDNKTT+KYLNVVWGNE+SAARWQM
Sbjct: 279  GCFVRVGIGKNRYGPIYRLCVVRNVDGSDPDRLYKLDNKTTYKYLNVVWGNENSAARWQM 338

Query: 661  AMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEK 482
            AMISDS P KEE+DQWVREVER+GG MP+K EVLEKKEAI+KTNSFVYSA TVKQMLQEK
Sbjct: 339  AMISDSPPAKEEYDQWVREVERSGGRMPSKLEVLEKKEAIQKTNSFVYSAETVKQMLQEK 398

Query: 481  KSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLA 302
            KSATWRPLNVAAEKDRLR  +E+AK N+DE EV+RIK+RL+ELEASRQ  E D KAI+LA
Sbjct: 399  KSATWRPLNVAAEKDRLRTEMEVAKINNDELEVERIKARLQELEASRQAHEMDKKAIRLA 458

Query: 301  EMNRRNRVENFKNASELKPVNTSLKAG 221
            EMNR+NRVENFKNAS LKPVN SLKAG
Sbjct: 459  EMNRKNRVENFKNASGLKPVNASLKAG 485



 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H F+L I+L  L+ FGG +GAQAGFMARKQ+IEA  G +VPEND
Sbjct: 568 HGFKLEINLDPLENFGGAKGAQAGFMARKQRIEATVGCRVPEND 611


>ref|XP_006347073.1| PREDICTED: protein RTF1 homolog [Solanum tuberosum]
            gi|971550132|ref|XP_015164153.1| PREDICTED: protein RTF1
            homolog [Solanum tuberosum]
            gi|971550134|ref|XP_015164154.1| PREDICTED: protein RTF1
            homolog [Solanum tuberosum]
          Length = 652

 Score =  547 bits (1409), Expect = 0.0
 Identities = 303/499 (60%), Positives = 348/499 (69%), Gaps = 22/499 (4%)
 Frame = -1

Query: 1651 DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPSGS 1472
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 1471 QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTELE 1292
            QVPLKKRLDP +RDDD SS  G               S+GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 1291 REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 1133
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 1132 L--------------VKXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 995
            +               K             YSP+KRRSFTAATL                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNEG 241

Query: 994  XXXXXG-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 818
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 817  GKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 638
            G+SRSGPIYRLCVVRNVDSSDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPP 361

Query: 637  LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 458
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 457  NVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 278
            NVAAEKDRLRR +E+AK  +DE EV+RIK+RL+EL+ SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 277  ENFKNASELKPVNTSLKAG 221
            ENFKNASEL+PVN  LKAG
Sbjct: 482  ENFKNASELRPVNQLLKAG 500



 Score = 73.9 bits (180), Expect = 4e-10
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISLAVLQKFGG QG QAGFMARKQ+IEA  G  VPEND
Sbjct: 589 HDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPEND 632


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            lycopersicum]
          Length = 645

 Score =  546 bits (1406), Expect = 0.0
 Identities = 303/499 (60%), Positives = 348/499 (69%), Gaps = 22/499 (4%)
 Frame = -1

Query: 1651 DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPSGS 1472
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 1471 QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTELE 1292
            QVPLKKRLDP +RDDD SS  G               S+GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 1291 REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 1133
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 1132 L--------------VKXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 995
            +               K             YSP+KRRSFTAA+L                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEG 241

Query: 994  XXXXXG-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 818
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 817  GKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 638
            G+SRSGPIYRLCVVRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPP 361

Query: 637  LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 458
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 457  NVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 278
            NVAAEKDRLRR +E+AK  +DE EV+RIK+RL+ELE SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 277  ENFKNASELKPVNTSLKAG 221
            ENFKNASEL+PVN  LKAG
Sbjct: 482  ENFKNASELRPVNQLLKAG 500



 Score = 73.9 bits (180), Expect = 4e-10
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISLAVLQKFGG QG QAGFMARKQ+IEA  G  VPEND
Sbjct: 582 HDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPEND 625


>ref|XP_015065731.1| PREDICTED: protein RTF1 homolog [Solanum pennellii]
          Length = 645

 Score =  545 bits (1405), Expect = 0.0
 Identities = 302/499 (60%), Positives = 348/499 (69%), Gaps = 22/499 (4%)
 Frame = -1

Query: 1651 DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPSGS 1472
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 1471 QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLTELE 1292
            QVPLKKRLDP +RDDD SS  G               S+GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 1291 REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 1133
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 1132 L--------------VKXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 995
            +               K             YSP+KRRSFTAA+L                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEG 241

Query: 994  XXXXXG-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 818
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 817  GKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 638
            G+SRSGPIYRLCVVRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPP 361

Query: 637  LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 458
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 457  NVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 278
            NVAAEKDRLRR +E+AK  +DE EV+RIK+RL+ELE SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 277  ENFKNASELKPVNTSLKAG 221
            ENFKNASEL+PVN  LKAG
Sbjct: 482  ENFKNASELRPVNQLLKAG 500



 Score = 73.9 bits (180), Expect = 4e-10
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISLAVLQKFGG QG QAGFMARKQ+IEA  G  VPEND
Sbjct: 582 HDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPEND 625


>ref|XP_009623037.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            tomentosiformis]
          Length = 654

 Score =  533 bits (1374), Expect = e-178
 Identities = 296/502 (58%), Positives = 345/502 (68%), Gaps = 25/502 (4%)
 Frame = -1

Query: 1651 DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPSGS 1472
            +L  LLLEAAGRT T                                    Y NRK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPPSSRRHHKSSYSDDGSDSRDDDSDDDR-GYSNRKLSGS 62

Query: 1471 QVPLKKRLDPTDRDDDRSSQ-EGXXXXXXXXXXXXXXXS-VGSDLYKDEDDREKLAQLTE 1298
            QVPLKKRLDP +RDDDRSS  EG                 +GSDLYKDE+DR+KLAQ+TE
Sbjct: 63   QVPLKKRLDPPERDDDRSSHGEGDDDGDGYGDERDSDDDSIGSDLYKDEEDRQKLAQMTE 122

Query: 1297 LEREMILEARATKRSDRDLHEKFK---KRKGQDRKGSPPKAHTRNMRSK-------AERA 1148
            L+REMIL  RA+K+SDR L EK     K + Q RK S P +H+R MRS        A+R 
Sbjct: 123  LDREMILTDRASKKSDRSLQEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRD 182

Query: 1147 GALDELV-------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXX 1007
             AL+E+              K             YSPVKRRSFTAA L            
Sbjct: 183  DALNEIRAKRARQQDPEGNWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSR 242

Query: 1006 XXXXXXXXXGMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR 827
                        D  DD  + ES++PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR
Sbjct: 243  SNEGDSSGDDGMDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR 302

Query: 826  VGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISD 647
            VGIG+SRSGPIYRLC+VRNVD++DP+RQYKL+NKTT K+LN+VWGN+SSAARWQMAM+SD
Sbjct: 303  VGIGRSRSGPIYRLCIVRNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSD 362

Query: 646  SLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATW 467
            S PL++EFDQWV+EVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATW
Sbjct: 363  SPPLRDEFDQWVKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATW 422

Query: 466  RPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRR 287
            RPLNVAAEKDRLRR +E+AK  +DE EV++IK+RL+ELEASR+ QEKD KA +LAEMNR+
Sbjct: 423  RPLNVAAEKDRLRREMEVAKMKNDEAEVEKIKARLQELEASRKAQEKDDKARRLAEMNRK 482

Query: 286  NRVENFKNASELKPVNTSLKAG 221
            NRVENFKNASEL+PVN  LKAG
Sbjct: 483  NRVENFKNASELRPVNQLLKAG 504



 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISLAVLQKFGGPQG+QAGFMARKQ+IEA  G +VPEND
Sbjct: 591 HDFDLPISLAVLQKFGGPQGSQAGFMARKQRIEATVGCRVPEND 634


>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nicotiana
            sylvestris]
          Length = 654

 Score =  533 bits (1372), Expect = e-178
 Identities = 295/502 (58%), Positives = 345/502 (68%), Gaps = 25/502 (4%)
 Frame = -1

Query: 1651 DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPSGS 1472
            +L  LLLEAAGRT T                                    Y NRK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPPSSRRHHKSSYSDDGSDSRDDDSDDDR-GYSNRKLSGS 62

Query: 1471 QVPLKKRLDPTDRDDDRSSQ-EGXXXXXXXXXXXXXXXS-VGSDLYKDEDDREKLAQLTE 1298
            QVPLKKRLDP +RDDDRSS  EG                 +GSDLYKDE+DR+KLAQ++E
Sbjct: 63   QVPLKKRLDPPERDDDRSSHGEGDDDGDGYGDERDSDDDSIGSDLYKDEEDRQKLAQMSE 122

Query: 1297 LEREMILEARATKRSDRDLHEKFK---KRKGQDRKGSPPKAHTRNMRSK-------AERA 1148
            L+REMIL  RA+K+SDR L EK     K + Q RK S P +H+R MRS        A+R 
Sbjct: 123  LDREMILTDRASKKSDRSLQEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRD 182

Query: 1147 GALDELV-------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXXXX 1007
             AL+E+              K             YSPVKRRSFTAA L            
Sbjct: 183  DALNEIRAKRARQQDPEGNWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSR 242

Query: 1006 XXXXXXXXXGMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR 827
                        D  DD  + ES++PTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR
Sbjct: 243  SNEGDSSGDDGMDDSDDDKSPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVR 302

Query: 826  VGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISD 647
            VGIG+SRSGPIYRLC+VRNVD++DP+RQYKL+NKTT K+LN++WGN+SSAARWQMAM+SD
Sbjct: 303  VGIGRSRSGPIYRLCIVRNVDATDPNRQYKLENKTTFKFLNLIWGNDSSAARWQMAMVSD 362

Query: 646  SLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATW 467
            S PL++EFDQWV+EVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATW
Sbjct: 363  SPPLRDEFDQWVKEVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATW 422

Query: 466  RPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRR 287
            RPLNVAAEKDRLRR +E+AK  +DE EV+RIK+RL+ELEASR+ QEKD KA +LAEMNR+
Sbjct: 423  RPLNVAAEKDRLRREMEVAKMKNDEAEVERIKARLQELEASRKAQEKDDKARRLAEMNRK 482

Query: 286  NRVENFKNASELKPVNTSLKAG 221
            NRVENFKNASEL+PVN  LKAG
Sbjct: 483  NRVENFKNASELRPVNQLLKAG 504



 Score = 76.6 bits (187), Expect = 6e-11
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISLAVLQKFGGPQG+QAGF+ARKQ+IEA  G +VPEND
Sbjct: 591 HDFDLPISLAVLQKFGGPQGSQAGFIARKQRIEATVGCRVPEND 634


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  520 bits (1339), Expect = e-173
 Identities = 292/506 (57%), Positives = 343/506 (67%), Gaps = 27/506 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                  R Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSS-QEGXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQLT 1301
            GSQVPLKKRLDPT+RDDD  S +EG                VGSDLYK+EDDR++LAQLT
Sbjct: 61   GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLT 120

Query: 1300 ELEREMILEARATKRSDRDLHEKFKKRKG----QDRKGSPPKAHTRNMRSKA---ERAGA 1142
            ELEREMIL  RATK++D+ LHEK + ++G    Q RK SPP   +R +RS A   +RA A
Sbjct: 121  ELEREMILTDRATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAA 180

Query: 1141 LDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXX 1013
             D+ +                 K             +SPVKRR+FTAA+L          
Sbjct: 181  KDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASLSSSSQSESDG 240

Query: 1012 XXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 839
                          M DSDDD+    S VPTFEDIK ITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 241  GSRSEDEGSTGDGAMVDSDDDRGIG-SDVPTFEDIKSITIRRSKLAKWFMEPFFEELIVG 299

Query: 838  CFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 659
            CFVRVGIGKSRSGPIYRLC+VRNVD+SDPDR Y+L+NKTT+KYLN VWGNE+S+ARWQMA
Sbjct: 300  CFVRVGIGKSRSGPIYRLCMVRNVDASDPDRHYQLENKTTYKYLNCVWGNENSSARWQMA 359

Query: 658  MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 479
            M+SDS PL EEF+QWV+EVER+G  M TKQ++LEK+EAI+KTN FVYSAAT KQMLQEKK
Sbjct: 360  MVSDSGPLMEEFNQWVKEVERSGSRMLTKQDILEKREAIQKTNMFVYSAATGKQMLQEKK 419

Query: 478  SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 299
            S + RPLN+ AEKDRLRR +E+A    D+ EV+RI +RL++LEASR+ +EKD+KAI+LAE
Sbjct: 420  SVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAKAIRLAE 479

Query: 298  MNRRNRVENFKNASELKPVNTSLKAG 221
            MNR+NR ENFKNASE K VNTSLKAG
Sbjct: 480  MNRKNRAENFKNASESKRVNTSLKAG 505



 Score = 75.1 bits (183), Expect = 2e-10
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+FELPISLA LQKFGGPQGA AGFMARKQ+IEA  G +VPEND
Sbjct: 595 HDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPEND 638


>ref|XP_015574623.1| PREDICTED: protein RTF1 homolog [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  516 bits (1330), Expect = e-172
 Identities = 286/508 (56%), Positives = 348/508 (68%), Gaps = 29/508 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                  R Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXS---VGSDLYKDEDDREKLAQ 1307
            GSQVPLKKRLDPT+RDDD+ SQ+                    VG DLYK+EDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 1306 LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 1151
            ++ELEREMIL  RA K+ D++L E+ + ++  +R     K +PP   +R +R+ A   +R
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 1150 AGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXX 1022
            A A D+ +                 K             +SP+KR+ FT+A+L       
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 1021 XXXXXXXXXXXXXXG-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 845
                          G MADSDDD     S+ PTF+DI+EITIRRSKLAKWFMEP+F+ELI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDGEPG-SQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 844  VGCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 665
            VGCFVRVGIG+S+SGPIYRLC+VRNVD++DPDR YKL+NKTT+KYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 664  MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 485
            MAMISDS P ++E+ QWVREVER+GG MPTKQ++LEKKEAI+K+N+FVYSAATVKQMLQE
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 484  KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 305
            KKSA+ RPLNVAAEKDRLRR LE+A+   D+ EV+RI++R++ELEASRQ Q KD+KAI+L
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 304  AEMNRRNRVENFKNASELKPVNTSLKAG 221
            AEMNR+NR ENF+NASELKPVNTSLKAG
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAG 507



 Score = 73.2 bits (178), Expect = 8e-10
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISL  LQKFGG QGAQAGFMARKQ+IEA  G +V END
Sbjct: 597 HNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSEND 640


>gb|KYP53243.1| RNA polymerase-associated protein RTF1 isogeny [Cajanus cajan]
          Length = 631

 Score =  511 bits (1317), Expect = e-170
 Identities = 288/507 (56%), Positives = 347/507 (68%), Gaps = 28/507 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDEPNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQ 1307
            GSQVPLKKRLDPT+RDDD  SQE                   ++G DLYKDEDDR KL++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEGDDDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 1306 LTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG- 1145
            +TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADR 179

Query: 1144 -----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXX 1016
                 AL+EL             +            ++SP KR+ FT+ +L         
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRQFSPPKRKQFTSTSLSSSSHSESE 239

Query: 1015 XXXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIV 842
                           +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF++LIV
Sbjct: 240  SRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEDLIV 299

Query: 841  GCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQM 662
            GCFVRVGIG+S+SGPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQM
Sbjct: 300  GCFVRVGIGRSKSGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 661  AMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEK 482
            AM+SDS PL+EEF QWV+EV+R+GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 481  KSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLA 302
            KSA+ RPLNVAAEKDRLRR LEIA+   D+ EV+RIK+RL ELEASRQ ++KD+KA+KLA
Sbjct: 420  KSASIRPLNVAAEKDRLRRELEIAQSKHDDAEVERIKTRLLELEASRQAKQKDAKALKLA 479

Query: 301  EMNRRNRVENFKNASELKPVNTSLKAG 221
            EMNR+NR ENFKNASELKPVNT LKAG
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAG 506



 Score = 74.3 bits (181), Expect = 3e-10
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQKFGG QGAQAGFMARKQ+IEA  G +V END
Sbjct: 568 HNFELPISLALLQKFGGSQGAQAGFMARKQRIEATVGFRVLEND 611


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  509 bits (1312), Expect = e-169
 Identities = 287/507 (56%), Positives = 344/507 (67%), Gaps = 28/507 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQ 1307
            GSQVPLKKRLDP++RDDD  SQE                   ++G DLYKDEDDR KL++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 1306 LTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG- 1145
            +TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179

Query: 1144 -----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXX 1016
                 AL+EL             +             +SP KR+ FT+ +L         
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239

Query: 1015 XXXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIV 842
                           + DSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIV
Sbjct: 240  SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299

Query: 841  GCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQM 662
            GCFVRVGIG+S++GPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQM
Sbjct: 300  GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 661  AMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEK 482
            AM+SDS PL+EEF QWV+EV+R+GG MPTKQ+VLEKK+AI+K  +FVYSAATVKQMLQEK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 481  KSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLA 302
            KSA+ RPLNVAAEKDRLRR LEIA+   DE EV RIK+RL+ELEASR  ++KD+KA+KLA
Sbjct: 420  KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479

Query: 301  EMNRRNRVENFKNASELKPVNTSLKAG 221
            EMNR+NR ENFKNASELKPVNT LKAG
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAG 506



 Score = 72.0 bits (175), Expect = 2e-09
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQK+GG QGAQAGFMARKQ+IE+  G +V END
Sbjct: 591 HNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLEND 634


>ref|XP_003529309.1| PREDICTED: protein RTF1 homolog [Glycine max]
            gi|955331713|ref|XP_014633601.1| PREDICTED: protein RTF1
            homolog [Glycine max] gi|947101511|gb|KRH50003.1|
            hypothetical protein GLYMA_07G194200 [Glycine max]
          Length = 656

 Score =  509 bits (1312), Expect = e-169
 Identities = 286/506 (56%), Positives = 345/506 (68%), Gaps = 27/506 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQL 1304
            GSQVPLKKRLDPT+RDDD  SQE                  ++G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1303 TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 1145
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179

Query: 1144 ----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXX 1013
                AL+EL             +             +SP KR+ FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 1012 XXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 839
                          + DSDDD+  + S+ P+F+D+KEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 838  CFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 659
            CFVRVGIG+S++GPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 658  MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 479
            M+SDS PL+EEF QWV+EV+R+GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 478  SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 299
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479

Query: 298  MNRRNRVENFKNASELKPVNTSLKAG 221
            MNR+NR ENFKNASE+KPVNT LKAG
Sbjct: 480  MNRKNRFENFKNASEMKPVNTGLKAG 505



 Score = 75.1 bits (183), Expect = 2e-10
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQKFGG QGAQAGFMARKQ+IEA  G +V END
Sbjct: 593 HNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSEND 636


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  509 bits (1312), Expect = e-169
 Identities = 281/508 (55%), Positives = 345/508 (67%), Gaps = 29/508 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT +                                  R Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXS---VGSDLYKDEDDREKLAQ 1307
            GSQVPLKKRLDP +RDDD+ SQE                    VG DLYKDEDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 1306 LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 1151
            ++ELEREMIL  RA K+ D++L E+ + ++  +R     K +PP   +R +R+ A   +R
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 1150 AGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXX 1022
            A A D+ +                 K              SPV+R+ FT+A+L       
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240

Query: 1021 XXXXXXXXXXXXXXG-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 845
                          G MADSD+D+      + T++DI+E+TIRRSKLAKW MEP+F+ELI
Sbjct: 241  DSRSHSEDEASTGDGGMADSDEDREPGSEGL-TYDDIREVTIRRSKLAKWLMEPWFEELI 299

Query: 844  VGCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 665
            VGCFVRVGIG+S+SGPIYRLC+VRNVD++DPDR YKL+NKTT+KYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 664  MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 485
            MAM+SDS P ++E+ QWVREVER+GG MPTKQ++LEKKEAIKK+N+FVYSAATVKQMLQE
Sbjct: 360  MAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQE 419

Query: 484  KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 305
            KKSA+ RPLNVAAEKDRLRR LE+A+   D+ EV+RI++R++ELEASRQ QEKD+KAI+L
Sbjct: 420  KKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 479

Query: 304  AEMNRRNRVENFKNASELKPVNTSLKAG 221
            AEMNR+NR ENF+NASELKPVNTSLKAG
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAG 507



 Score = 70.5 bits (171), Expect = 5e-09
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           H+F+LPISL  L+KFGG +GA+AGFMARKQQIEA  G +VPEND
Sbjct: 595 HDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPEND 638


>gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  509 bits (1310), Expect = e-169
 Identities = 286/506 (56%), Positives = 346/506 (68%), Gaps = 27/506 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQL 1304
            GSQVPLKKRLDPT+RDDD  SQE                  ++G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1303 TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 1145
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 1144 ----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXX 1013
                AL+EL             +             +SP KR++FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 1012 XXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 839
                          +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 838  CFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 659
            CFVRVGIG+S++GPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 658  MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 479
            M+SDS P++EEF QWV+EV+ +GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 478  SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 299
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL+ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 298  MNRRNRVENFKNASELKPVNTSLKAG 221
            MNR+NR ENFKNASELKPVN  LKAG
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAG 505



 Score = 70.5 bits (171), Expect = 5e-09
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQK+GG  GAQAGFMARKQ+IE+  G +V END
Sbjct: 583 HNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSEND 626


>ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba]
          Length = 638

 Score =  508 bits (1309), Expect = e-169
 Identities = 275/453 (60%), Positives = 326/453 (71%), Gaps = 27/453 (5%)
 Frame = -1

Query: 1498 YPNRKPSGSQVPLKKRLDPTDRDDDRSSQE-GXXXXXXXXXXXXXXXSVGSDLYKDEDDR 1322
            Y  RKPSGSQVPLKKRLDP +RDDD+ S+E G                VGSDLYKDEDDR
Sbjct: 37   YAGRKPSGSQVPLKKRLDPAERDDDQGSEEEGDDDRGSDQEGDSDESDVGSDLYKDEDDR 96

Query: 1321 EKLAQLTELEREMILEARATKRSDRDLHEKFKKR--KG---QDRKGSPP--KAHTRNMRS 1163
             KLA++TEL+REMIL  RATK+ DR+L EK + +  KG   Q RK +PP   +  R+   
Sbjct: 97   RKLAEMTELDREMILLDRATKKEDRNLKEKLRPKWEKGKTTQSRKETPPLPSSRVRSSAR 156

Query: 1162 KAERAGALDELV-----------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXX 1034
             A+RA A D+ +                 K             +S   R+SFTAA+L   
Sbjct: 157  SADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHTNRKSFTAASLSSS 216

Query: 1033 XXXXXXXXXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPF 860
                                 M DSDD++    S+ PTF+DI+EITIRRSKLAKW MEPF
Sbjct: 217  SQSESESGSGSEDEGSTGDGGMIDSDDERGMPGSEGPTFDDIREITIRRSKLAKWIMEPF 276

Query: 859  FDELIVGCFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESS 680
            F+ELIVGCFVRVGIG+S+SGPIYRLC+VRNVD++DPDRQY+L+NKTT+KYLNVVWGNE+S
Sbjct: 277  FEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATDPDRQYRLENKTTYKYLNVVWGNENS 336

Query: 679  AARWQMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVK 500
            AARWQMAM+SDS P++EEF QWVREVER+GG MP+KQ+VLEKKEAIKK NSFVYSAATVK
Sbjct: 337  AARWQMAMVSDSAPIEEEFKQWVREVERSGGRMPSKQDVLEKKEAIKKINSFVYSAATVK 396

Query: 499  QMLQEKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDS 320
            QMLQEKKSA+ RP N+A EKDRLRR LE+A+   DE EV+RIK+RL+ELEASR+  E D+
Sbjct: 397  QMLQEKKSASSRPFNIALEKDRLRRELEVAQSKHDEMEVERIKTRLQELEASRKAHENDA 456

Query: 319  KAIKLAEMNRRNRVENFKNASELKPVNTSLKAG 221
            KAI+LAEMNR+NR ENFKNASELKPVNTSLKAG
Sbjct: 457  KAIRLAEMNRKNRAENFKNASELKPVNTSLKAG 489



 Score = 79.3 bits (194), Expect = 9e-12
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISL  LQKFGGPQGAQAGFMARKQ+IEA  G +VPEND
Sbjct: 575 HNFELPISLTTLQKFGGPQGAQAGFMARKQRIEATVGCRVPEND 618


>ref|XP_003542767.1| PREDICTED: protein RTF1 homolog [Glycine max]
            gi|947071604|gb|KRH20495.1| hypothetical protein
            GLYMA_13G182500 [Glycine max]
          Length = 656

 Score =  509 bits (1310), Expect = e-169
 Identities = 286/506 (56%), Positives = 346/506 (68%), Gaps = 27/506 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQL 1304
            GSQVPLKKRLDPT+RDDD  SQE                  ++G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1303 TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 1145
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 1144 ----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXX 1013
                AL+EL             +             +SP KR++FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 1012 XXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 839
                          +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 838  CFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 659
            CFVRVGIG+S++GPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 658  MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 479
            M+SDS P++EEF QWV+EV+ +GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 478  SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 299
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL+ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 298  MNRRNRVENFKNASELKPVNTSLKAG 221
            MNR+NR ENFKNASELKPVN  LKAG
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAG 505



 Score = 70.5 bits (171), Expect = 5e-09
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQK+GG  GAQAGFMARKQ+IE+  G +V END
Sbjct: 593 HNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSEND 636


>gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  508 bits (1308), Expect = e-168
 Identities = 286/506 (56%), Positives = 345/506 (68%), Gaps = 27/506 (5%)
 Frame = -1

Query: 1657 MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYPNRKPS 1478
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1477 GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXSVGSDLYKDEDDREKLAQL 1304
            GSQVPLKKRLDPT+RDDD  SQE                  ++G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRNDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 1303 TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 1145
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 1144 ----ALDELV------------KXXXXXXXXXXXXRYSPVKRRSFTAATLXXXXXXXXXX 1013
                AL+EL             +             +SP KR+ FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 1012 XXXXXXXXXXXG--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 839
                          +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 838  CFVRVGIGKSRSGPIYRLCVVRNVDSSDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 659
            CFVRVGIG+S++GPIYRLC+V+NVD+S+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 658  MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 479
            M+SDS P++EEF QWV+EV+ +GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 478  SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 299
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL+ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 298  MNRRNRVENFKNASELKPVNTSLKAG 221
            MNR+NR ENFKNASELKPVN  LKAG
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAG 505



 Score = 70.5 bits (171), Expect = 5e-09
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -3

Query: 134 HNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 3
           HNFELPISLA+LQK+GG  GAQAGFMARKQ+IE+  G +V END
Sbjct: 583 HNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSEND 626