BLASTX nr result
ID: Rehmannia28_contig00008698
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00008698
(367 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012832449.1| PREDICTED: photosystem I reaction center sub... 69 8e-12
ref|XP_011071575.1| PREDICTED: photosystem I reaction center sub... 68 2e-11
gb|ABK96014.1| unknown [Populus trichocarpa] 65 2e-11
emb|CAL25356.1| photosystem I reaction center subunit II [Platan... 64 8e-11
ref|XP_010522735.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
ref|XP_009400838.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
ref|XP_010277521.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
gb|EPS62726.1| hypothetical protein M569_12065 [Genlisea aurea] 65 1e-10
ref|XP_011015859.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
ref|XP_011026306.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
ref|NP_001299579.1| photosystem I reaction center subunit II, ch... 65 1e-10
ref|XP_002311618.2| photosystem I 20kD family protein [Populus t... 65 1e-10
ref|XP_009621208.1| PREDICTED: photosystem I reaction center sub... 65 1e-10
ref|XP_013736166.1| PREDICTED: photosystem I reaction center sub... 64 2e-10
ref|XP_009396832.1| PREDICTED: photosystem I reaction center sub... 65 2e-10
pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I 63 2e-10
pdb|4XK8|D Chain D, Crystal Structure Of Plant Photosystem I-lhc... 63 2e-10
gb|KRG91275.1| hypothetical protein GLYMA_20G144700 [Glycine max] 63 3e-10
gb|KVH91829.1| hypothetical protein Ccrd_006174 [Cynara carduncu... 64 3e-10
gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides] 64 3e-10
>ref|XP_012832449.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Erythranthe guttata]
gi|604342469|gb|EYU41499.1| hypothetical protein
MIMGU_mgv1a013699mg [Erythranthe guttata]
Length = 212
Score = 68.6 bits (166), Expect = 8e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGRTGVG NMRSIGKNASPIEVKFTGKQVYDL
Sbjct: 179 VNAGRTGVGLNMRSIGKNASPIEVKFTGKQVYDL 212
>ref|XP_011071575.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Sesamum indicum]
Length = 213
Score = 67.8 bits (164), Expect = 2e-11
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GRTGVGQNMRSIGKN SPIEVKFTGKQVYDL
Sbjct: 180 VNPGRTGVGQNMRSIGKNVSPIEVKFTGKQVYDL 213
>gb|ABK96014.1| unknown [Populus trichocarpa]
Length = 97
Score = 65.1 bits (157), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 64 VNPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 97
>emb|CAL25356.1| photosystem I reaction center subunit II [Platanus x acerifolia]
Length = 122
Score = 63.9 bits (154), Expect = 8e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKNA+PIEVKFTGKQVYDL
Sbjct: 89 VNPGRQGVGQNFRSIGKNANPIEVKFTGKQVYDL 122
>ref|XP_010522735.1| PREDICTED: photosystem I reaction center subunit II-2,
chloroplastic [Tarenaya hassleriana]
Length = 207
Score = 65.5 bits (158), Expect = 1e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 363 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
N GR GVGQNMRSIGKNASPIEVKFTGKQVYDL
Sbjct: 175 NPGRQGVGQNMRSIGKNASPIEVKFTGKQVYDL 207
>ref|XP_009400838.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 207
Score = 65.5 bits (158), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQNMRSIGKN SPIEVKFTGKQVYDL
Sbjct: 174 VNPGRQGVGQNMRSIGKNVSPIEVKFTGKQVYDL 207
>ref|XP_010277521.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
[Nelumbo nucifera]
Length = 213
Score = 65.5 bits (158), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 180 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 213
>gb|EPS62726.1| hypothetical protein M569_12065 [Genlisea aurea]
Length = 196
Score = 65.1 bits (157), Expect = 1e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGRTGVGQN RSIGKN SPIEVKFTGKQ YD+
Sbjct: 163 VNAGRTGVGQNFRSIGKNVSPIEVKFTGKQTYDV 196
>ref|XP_011015859.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Populus euphratica]
Length = 203
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 170 VNPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 203
>ref|XP_011026306.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Populus euphratica]
Length = 203
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 170 VNPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 203
>ref|NP_001299579.1| photosystem I reaction center subunit II, chloroplastic [Nicotiana
sylvestris] gi|698499382|ref|XP_009795521.1| PREDICTED:
photosystem I reaction center subunit II, chloroplastic
[Nicotiana sylvestris] gi|131167|sp|P29302.1|PSAD_NICSY
RecName: Full=Photosystem I reaction center subunit II,
chloroplastic; AltName: Full=Photosystem I 20 kDa
subunit; Short=PSI-D; Flags: Precursor
gi|19748|emb|CAA42623.1| PSI-D2 [Nicotiana sylvestris]
Length = 204
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 171 VNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204
>ref|XP_002311618.2| photosystem I 20kD family protein [Populus trichocarpa]
gi|550333111|gb|EEE88985.2| photosystem I 20kD family
protein [Populus trichocarpa]
Length = 204
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKNASPIEVKFTGKQVYDL
Sbjct: 171 VNPGRQGVGQNFRSIGKNASPIEVKFTGKQVYDL 204
>ref|XP_009621208.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
[Nicotiana tomentosiformis]
Length = 207
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 174 VNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 207
>ref|XP_013736166.1| PREDICTED: photosystem I reaction center subunit II-2,
chloroplastic, partial [Brassica napus]
Length = 142
Score = 63.5 bits (153), Expect = 2e-10
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -2
Query: 363 NAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
NAGR GVGQNMRSIGKN SPIEVKFTGKQ YDL
Sbjct: 110 NAGREGVGQNMRSIGKNVSPIEVKFTGKQSYDL 142
>ref|XP_009396832.1| PREDICTED: photosystem I reaction center subunit II,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 259
Score = 65.5 bits (158), Expect = 2e-10
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQNMRSIGKN SPIEVKFTGKQVYDL
Sbjct: 226 VNPGRQGVGQNMRSIGKNVSPIEVKFTGKQVYDL 259
>pdb|3LW5|D Chain D, Improved Model Of Plant Photosystem I
Length = 138
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 105 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 138
>pdb|4XK8|D Chain D, Crystal Structure Of Plant Photosystem I-lhci
Super-complex At 2.8 Angstrom Resolution
gi|829581675|pdb|4XK8|DD Chain d, Crystal Structure Of
Plant Photosystem I-lhci Super-complex At 2.8 Angstrom
Resolution
Length = 141
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 108 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 141
>gb|KRG91275.1| hypothetical protein GLYMA_20G144700 [Glycine max]
Length = 148
Score = 63.2 bits (152), Expect = 3e-10
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQN RSIGKN SPIEVKFTGKQ YDL
Sbjct: 115 VNAGRQGVGQNFRSIGKNVSPIEVKFTGKQPYDL 148
>gb|KVH91829.1| hypothetical protein Ccrd_006174 [Cynara cardunculus var. scolymus]
Length = 207
Score = 64.3 bits (155), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VNAGR GVGQNMRSIGKN SPIEVKFTGKQ YD+
Sbjct: 174 VNAGRQGVGQNMRSIGKNVSPIEVKFTGKQPYDI 207
>gb|ABK96248.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 63.5 bits (153), Expect = 3e-10
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2
Query: 366 VNAGRTGVGQNMRSIGKNASPIEVKFTGKQVYDL 265
VN GR GVGQN RSIGKN SPIEVKFTGKQVYDL
Sbjct: 133 VNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 166