BLASTX nr result

ID: Rehmannia28_contig00008561 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00008561
         (438 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42959.1| hypothetical protein MIMGU_mgv1a013825mg [Erythra...    80   6e-16
gb|EYU19345.1| hypothetical protein MIMGU_mgv1a025000mg [Erythra...    80   6e-16
ref|XP_009773352.1| PREDICTED: 60S ribosomal protein L2, mitocho...    58   1e-07
ref|XP_010650732.1| PREDICTED: 60S ribosomal protein L2, mitocho...    55   1e-06
ref|NP_001307200.1| ribosomal protein L2 [Solanum lycopersicum] ...    54   4e-06
ref|XP_006359959.1| PREDICTED: 60S ribosomal protein L2, mitocho...    53   7e-06
ref|XP_009591213.1| PREDICTED: 60S ribosomal protein L2, mitocho...    53   7e-06
gb|AIS71898.1| mitochondrial-like 60S ribosomal protein L2 [Nico...    53   7e-06

>gb|EYU42959.1| hypothetical protein MIMGU_mgv1a013825mg [Erythranthe guttata]
          Length = 209

 Score = 80.1 bits (196), Expect = 6e-16
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIE-TVESK-PVSSWKSSMMSQMVTLDISSQI 15
           MAL RAR  SSTLLRS+L AP+RS SSGAIE  VESK  V SWK++MM+ M T DISSQI
Sbjct: 1   MALLRARFPSSTLLRSLLSAPSRSLSSGAIEPVVESKGGVQSWKTTMMNHMATQDISSQI 60

Query: 14  GSCM 3
           GSCM
Sbjct: 61  GSCM 64


>gb|EYU19345.1| hypothetical protein MIMGU_mgv1a025000mg [Erythranthe guttata]
          Length = 209

 Score = 80.1 bits (196), Expect = 6e-16
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIE-TVESK-PVSSWKSSMMSQMVTLDISSQI 15
           MAL RAR  SSTLLRS+L AP+RS SSGAIE  VESK  V SWK++MM+ M T DISSQI
Sbjct: 1   MALLRARFPSSTLLRSLLSAPSRSLSSGAIEPAVESKGGVQSWKTTMMNHMATQDISSQI 60

Query: 14  GSCM 3
           GSCM
Sbjct: 61  GSCM 64


>ref|XP_009773352.1| PREDICTED: 60S ribosomal protein L2, mitochondrial [Nicotiana
           sylvestris]
          Length = 202

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIETVESKPVSSWKSSMMSQMVTLDISSQIGS 9
           MALFRAR+ASS+LL +++H   RSFS    E + SK   S +   M    +LDISSQIGS
Sbjct: 1   MALFRARIASSSLLSNVIH---RSFSISPFEALASKMKPSKELESMMSQFSLDISSQIGS 57

Query: 8   CM 3
           CM
Sbjct: 58  CM 59


>ref|XP_010650732.1| PREDICTED: 60S ribosomal protein L2, mitochondrial [Vitis vinifera]
           gi|296084340|emb|CBI24728.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIETV-ESKPVSSWKSSMMSQMVTLDISSQIG 12
           MAL RAR ASSTLL+ +L     + S   + +V +  P  +++ SMM+QM +LDI+SQIG
Sbjct: 1   MALVRARAASSTLLKRLLFPSVANPSHRNLSSVAKDSPHDAFRESMMNQMFSLDINSQIG 60

Query: 11  SCM 3
           SCM
Sbjct: 61  SCM 63


>ref|NP_001307200.1| ribosomal protein L2 [Solanum lycopersicum]
           gi|970043830|ref|XP_015083322.1| PREDICTED: 60S
           ribosomal protein L2, mitochondrial [Solanum pennellii]
           gi|17644112|gb|AAK95390.1| ribosomal protein L2 [Solanum
           lycopersicum]
          Length = 202

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIETVESKPVSSWKSSMMSQMVTLDISSQIGS 9
           MAL RAR+ASS LLR++++   RSFS+   E + SK   S +   M +  +LDISSQIGS
Sbjct: 1   MALCRARMASSFLLRNVIN---RSFSTSPFEAMISKMKPSKELESMMEQFSLDISSQIGS 57

Query: 8   CM 3
           CM
Sbjct: 58  CM 59


>ref|XP_006359959.1| PREDICTED: 60S ribosomal protein L2, mitochondrial [Solanum
           tuberosum]
          Length = 202

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = -2

Query: 188 MALFRARVASSTLLRSILHAPTRSFSSGAIETVESKPVSSWKSSMMSQMVTLDISSQIGS 9
           MAL RAR+ASS LLR++++   RSFS+   E + SK   S +   M    +LDISSQIGS
Sbjct: 1   MALCRARMASSFLLRNVIN---RSFSTSPFEAMISKMKPSKELESMMDQFSLDISSQIGS 57

Query: 8   CM 3
           CM
Sbjct: 58  CM 59


>ref|XP_009591213.1| PREDICTED: 60S ribosomal protein L2, mitochondrial [Nicotiana
           tomentosiformis]
          Length = 203

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 188 MALFRARVA-SSTLLRSILHAPTRSFSSGAIETVESKPVSSWKSSMMSQMVTLDISSQIG 12
           MALFRAR+A SS+LL + +H   RSFS+   E + SK   S +   M    +LDISSQIG
Sbjct: 1   MALFRARIAASSSLLSNAIH---RSFSTSPFEALASKMKPSKELESMMNQFSLDISSQIG 57

Query: 11  SCM 3
           SCM
Sbjct: 58  SCM 60


>gb|AIS71898.1| mitochondrial-like 60S ribosomal protein L2 [Nicotiana tabacum]
          Length = 203

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 188 MALFRARVA-SSTLLRSILHAPTRSFSSGAIETVESKPVSSWKSSMMSQMVTLDISSQIG 12
           MALFRAR+A SS+LL + +H   RSFS+   E + SK   S +   M    +LDISSQIG
Sbjct: 1   MALFRARIAASSSLLSNTIH---RSFSTSPFEALASKMKPSKELESMMSQFSLDISSQIG 57

Query: 11  SCM 3
           SCM
Sbjct: 58  SCM 60


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