BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00007986
         (1318 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris...    72   1e-12
gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium r...    59   2e-08
emb|CAD59438.1| Rps16 protein [Clivia gardenii]                        55   3e-06
ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus r...    55   7e-06

>gb|KMS97977.1| hypothetical protein BVRB_4g096970 [Beta vulgaris subsp. vulgaris]
          Length = 50

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -2

Query: 459 HNGSYPSSRTLLSTTSFQTKFYHNIPLIWNRYGIDSIMES 340
           ++GS P SRTLLSTTSFQTKFYHNIP  WN+YG+DSIMES
Sbjct: 11  NDGSCPLSRTLLSTTSFQTKFYHNIPQFWNQYGVDSIMES 50


>gb|KJB60706.1| hypothetical protein B456_009G321000 [Gossypium raimondii]
          Length = 75

 Score = 58.5 bits (140), Expect(2) = 2e-08
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = -3

Query: 509 QEHPHS*TN*KW*M*KSTMDRILQVARCFLPHRFKRSFTITFL 381
           Q+ P    N KW +  ST D +LQVARCFLPHRFKRSFTITFL
Sbjct: 33  QKAPSFLYNGKWWVLTSTADHVLQVARCFLPHRFKRSFTITFL 75



 Score = 29.3 bits (64), Expect(2) = 2e-08
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 564 YNPTKNEGFRCNRTNNVEPRAPSFL 490
           YNP K   +  NRT +VE +APSFL
Sbjct: 17  YNPKKKTDY--NRTKDVEQKAPSFL 39


>emb|CAD59438.1| Rps16 protein [Clivia gardenii]
          Length = 74

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +2

Query: 566 IVHDGARVERINSFLGGKDLGLMPINQLEQLRKYIFHI 679
           IVHDGAR + I+SF+GGK+LGL+ IN+L+QL KYI +I
Sbjct: 25  IVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILNI 62


>ref|YP_009175987.1| ribosomal protein S16 (chloroplast) [Ficus racemosa]
           gi|937500929|gb|ALI30688.1| ribosomal protein S16
           (chloroplast) [Ficus racemosa]
          Length = 117

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +2

Query: 566 IVHDGARVERINSFLGGKDLGLMPINQLEQLRKYIFHI 679
           I+HDGAR ERI+SF GGK+LGL+ IN+L QL K IF I
Sbjct: 4   IIHDGARAERIDSFFGGKNLGLVSINKLRQLCKSIFDI 41