BLASTX nr result
ID: Rehmannia28_contig00007972
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00007972
(472 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 218 2e-65
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 182 2e-50
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 178 5e-49
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 178 5e-49
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 177 1e-48
gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposo... 176 2e-48
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 176 2e-48
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 176 2e-48
gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposo... 173 3e-48
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo... 169 2e-47
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 173 3e-47
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo... 168 4e-47
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 170 7e-47
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo... 169 2e-46
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 170 3e-46
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 170 3e-46
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 170 3e-46
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 169 5e-46
emb|CAN80715.1| hypothetical protein VITISV_042933 [Vitis vinifera] 169 6e-46
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo... 168 9e-46
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 218 bits (555), Expect = 2e-65
Identities = 110/152 (72%), Positives = 123/152 (80%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
+SRKV++FL+K KSDVF+KFK WKTLIENQTGKRI+TLRTDNG+EFCN DNLCA GI
Sbjct: 235 YSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFDNLCANSGI 294
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
RRHK V +T QQNGV ERMNRTLLERVRSML SSGL K F GEA+ T YLINRSPS+ L
Sbjct: 295 RRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLINRSPSMPL 354
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVHQKG 472
G PE V+ GK++D SNL VF AAFVH KG
Sbjct: 355 NGDLPESVWCGKKVDLSNLHVFGYAAFVHHKG 386
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 182 bits (461), Expect = 2e-50
Identities = 88/151 (58%), Positives = 113/151 (74%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
+SRKVWI+ +KNKS+ F KFK WK L+E QT ++++ LRTDNGLEF +N ++LC K GI
Sbjct: 479 YSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGI 538
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
RH+ V YT QQNG+ ERMNRT+LERVR ML+SSGL K F EA T +LINRSPS +L
Sbjct: 539 ARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSAL 598
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVHQK 469
+ K P+ ++GK D+ +LKVF C A+VH K
Sbjct: 599 QFKTPQEKWTGKAADYQHLKVFGCTAYVHTK 629
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 178 bits (451), Expect = 5e-49
Identities = 83/148 (56%), Positives = 109/148 (73%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +K K +VF KFK WKT++E +TGK ++TLRTDNGLEFCN D C K GI
Sbjct: 621 SRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIV 680
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ V +T QQNGV ERMN+TL++R R M +GL K+F EAV+T AYL+NRSPS ++
Sbjct: 681 RHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAID 740
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K P+ V+SGK ++S LK+F C A+ H
Sbjct: 741 FKTPQEVWSGKPSNYSGLKIFGCPAYAH 768
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 178 bits (451), Expect = 5e-49
Identities = 83/148 (56%), Positives = 109/148 (73%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +K K +VF KFK WKT++E +TGK ++TLRTDNGLEFCN D C K GI
Sbjct: 834 SRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIV 893
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ V +T QQNGV ERMN+TL++R R M +GL K+F EAV+T AYL+NRSPS ++
Sbjct: 894 RHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAID 953
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K P+ V+SGK ++S LK+F C A+ H
Sbjct: 954 FKTPQEVWSGKPSNYSGLKIFGCPAYAH 981
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1269
Score = 177 bits (449), Expect = 1e-48
Identities = 86/149 (57%), Positives = 110/149 (73%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
HSRKVW++ +K+KS+VFE FK WK ++EN+TG +I+ LRTDNG E+ + C ++GI
Sbjct: 477 HSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGI 536
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
R + VP T QQNGV ERMNRTL ER RSM SGL K+F EAV+T AYLINR PSV L
Sbjct: 537 RMERTVPGTPQQNGVAERMNRTLTERARSMRMQSGLPKQFWAEAVNTAAYLINRGPSVPL 596
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ K PE V+SGK++ S+L+VF C A+VH
Sbjct: 597 EHKIPEEVWSGKEVKLSHLRVFGCVAYVH 625
>gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 864
Score = 176 bits (446), Expect = 2e-48
Identities = 85/149 (57%), Positives = 109/149 (73%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
HSRKVW++ +K+KS+VFE FK WK ++EN+TG +I+ LRTDNG E+ + C ++GI
Sbjct: 477 HSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGI 536
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
R + VP T QQNGV ERMNRTL ER RSM SGL K+F E V+T AYLINR PSV L
Sbjct: 537 RMERTVPGTPQQNGVAERMNRTLTERARSMRVQSGLPKQFWAETVNTAAYLINRGPSVPL 596
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ K PE V+SGK++ S+L+VF C A+VH
Sbjct: 597 EHKIPEEVWSGKEVKLSHLRVFGCVAYVH 625
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 176 bits (447), Expect = 2e-48
Identities = 84/149 (56%), Positives = 107/149 (71%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
+SR W+++MK+KS+ F+KFK WK L+ENQTGK+I+ LRTDNGLEFC + D C GI
Sbjct: 499 YSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGI 558
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
RH+ V T QQNGV ERMN+TLLER R ML+++GL +RF EAV T YLINR P +
Sbjct: 559 ARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGI 618
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ K P ++SGK D+SNLK F C A+ H
Sbjct: 619 QCKTPMEMWSGKAADYSNLKAFGCTAYYH 647
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 176 bits (447), Expect = 2e-48
Identities = 83/148 (56%), Positives = 105/148 (70%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
+RKVW++ MK K + FEKF W L+ENQT +R++TLRTDNGLEFCN L D C GI
Sbjct: 528 TRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIH 587
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ YT QQNGV ERMNRT++E+VRSML+ SGL KRF EA HTT LIN++PS +L
Sbjct: 588 RHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALN 647
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ P+ +SG +S L+ + C AFVH
Sbjct: 648 FEIPDKKWSGNPPVYSYLRRYGCVAFVH 675
>gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 597
Score = 173 bits (438), Expect = 3e-48
Identities = 81/149 (54%), Positives = 109/149 (73%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
+SRKVW++ +K+K +VF +FK WKT++E +TGK ++TLRTDNGLEFCN L D+ C + I
Sbjct: 422 YSRKVWVYFLKSKDEVFGRFKEWKTMVEKRTGKLVKTLRTDNGLEFCNALFDDYCKEASI 481
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
RH V +T QQNGVVERMN+TLL+R R M ++GL K F EAV+T AYL+NRSPS ++
Sbjct: 482 VRHLTVIHTPQQNGVVERMNQTLLQRARCMCLNAGLSKEFQAEAVNTIAYLVNRSPSTAI 541
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K P+ V SGK + L++F C A+ H
Sbjct: 542 DLKTPQEVSSGKPYYYFGLRIFGCPAYAH 570
>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 169 bits (428), Expect = 2e-47
Identities = 78/150 (52%), Positives = 107/150 (71%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +K K++VF++FK WK L+E Q G+ ++ LRTDNGLEFC+ C + G+
Sbjct: 50 SRKVWVYFLKQKNEVFDRFKEWKVLVETQIGRNLKKLRTDNGLEFCDEKFSKFCRENGVA 109
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RHK V T Q+NG+VER NRT+LERVR ML +GL K F EAV + Y INR PS +L+
Sbjct: 110 RHKTVRGTPQKNGLVERFNRTILERVRCMLNHAGLPKSFWAEAVSSAVYCINRCPSTALE 169
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVHQK 469
K P+ V+SG+++D+S L+VF C A+ H K
Sbjct: 170 FKTPQEVWSGRKVDYSELRVFGCIAYAHIK 199
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 173 bits (438), Expect = 3e-47
Identities = 79/152 (51%), Positives = 109/152 (71%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
++RKVW++ +K K + FEKF +W +L+ENQ+G+R++TLRTDNGLEFCN + D C + G
Sbjct: 534 YTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGF 593
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
+RH+ YT QQNGVVERMNRT++E+VRSML SGL KRF EA HT LIN++P ++
Sbjct: 594 QRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAI 653
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVHQKG 472
+ P+ +SGK +S L+ + C FVH G
Sbjct: 654 NFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDG 685
>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 498
Score = 168 bits (425), Expect = 4e-47
Identities = 78/150 (52%), Positives = 108/150 (72%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
+R+VW++++K+K++ ++KF++W TLI+NQ +++ LRTDNGLEF + C GI+
Sbjct: 103 TRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFAEFCRNQGIK 162
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ VP+T QQNG+ ERMNRT+LERVR ML SGL K+F GEA T AYLINR PS +L
Sbjct: 163 RHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINRCPSSALN 222
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVHQK 469
K P + GK +D+SNL+VF A+ H K
Sbjct: 223 NKTPMEAWHGKPVDYSNLRVFGSLAYAHVK 252
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 170 bits (431), Expect = 7e-47
Identities = 80/150 (53%), Positives = 106/150 (70%), Gaps = 2/150 (1%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +++K++ F FK WKTL+E QTGK+++ LRTDNGLEFC + CA +GI
Sbjct: 507 SRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIA 566
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL--*KRFSGEAVHTTAYLINRSPSVS 373
RHK +P QQNGV ER+NRT+LER R ML+++GL + EA T YLINRSP S
Sbjct: 567 RHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSS 626
Query: 374 LKGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
L K PE ++SG ID+SNL++F C A+ H
Sbjct: 627 LNFKIPEEIWSGNPIDYSNLRIFGCPAYAH 656
>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 634
Score = 169 bits (427), Expect = 2e-46
Identities = 78/150 (52%), Positives = 107/150 (71%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +K K++VF++FK WK L+E QTG+ ++ LRTDNGLEFC+ C + G+
Sbjct: 168 SRKVWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKLRTDNGLEFCDEKFSKFCRENGVA 227
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RHK V T Q+NG+ ER NRT+LERVR ML +GL K F EAV + Y INR PS +L+
Sbjct: 228 RHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVSSAVYCINRCPSTALE 287
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVHQK 469
K P+ V+SG+++D+S L+VF C A+ H K
Sbjct: 288 FKTPQEVWSGRKVDYSELRVFGCIAYAHIK 317
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 170 bits (431), Expect = 3e-46
Identities = 80/150 (53%), Positives = 106/150 (70%), Gaps = 2/150 (1%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +++K++ F FK WKTL+E QTGK+++ LRTDNGLEFC + CA +GI
Sbjct: 211 SRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIA 270
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL--*KRFSGEAVHTTAYLINRSPSVS 373
RHK +P QQNGV ER+NRT+LER R ML+++GL + EA T YLINRSP S
Sbjct: 271 RHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSS 330
Query: 374 LKGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
L K PE ++SG ID+SNL++F C A+ H
Sbjct: 331 LNFKIPEEIWSGNPIDYSNLRIFGCPAYAH 360
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 170 bits (431), Expect = 3e-46
Identities = 84/149 (56%), Positives = 107/149 (71%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
++RKV I+ +K K + F+KF W L+ENQT KRI+TLRTDNGLEFCN D C++ GI
Sbjct: 505 YTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGI 564
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
H+ YT QQNGV ERMNRTL+E+VRSML+ SGL K+F EA HTTA LIN++PS +L
Sbjct: 565 LWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSAL 624
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ P+ +SGK +S L+ F C AFVH
Sbjct: 625 NYEVPDKRWSGKSPIYSYLRRFGCIAFVH 653
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103833265 [Brassica rapa]
Length = 3353
Score = 170 bits (431), Expect = 3e-46
Identities = 79/148 (53%), Positives = 106/148 (71%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
S+KVW++ ++ K + F KFK WK +E+ T K+I+ LRTDNGLEFCNN D LC GI+
Sbjct: 441 SKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDELCRTSGIK 500
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ YT QQNGV ERMNRT++++VRSMLA +GL + F EA T YLINR+P+ ++
Sbjct: 501 RHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTAVYLINRTPNSTID 560
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K PE V+SG + D S+L+ F C A+VH
Sbjct: 561 FKLPEEVWSGNRPDLSHLRRFGCTAYVH 588
Score = 170 bits (431), Expect = 3e-46
Identities = 79/148 (53%), Positives = 106/148 (71%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
S+KVW++ ++ K + F KFK WK +E+ T K+I+ LRTDNGLEFCNN D LC GI+
Sbjct: 2516 SKKVWVYFLQTKDEAFSKFKEWKEAVESHTEKKIKCLRTDNGLEFCNNRFDELCRTSGIK 2575
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ YT QQNGV ERMNRT++++VRSMLA +GL + F EA T YLINR+P+ ++
Sbjct: 2576 RHRTCNYTPQQNGVSERMNRTIMDKVRSMLAETGLGQEFWAEATSTAVYLINRTPNSTID 2635
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K PE V+SG + D S+L+ F C A+VH
Sbjct: 2636 FKLPEEVWSGNRPDLSHLRRFGCTAYVH 2663
Score = 55.8 bits (133), Expect = 3e-06
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Frame = +2
Query: 176 LCAKYGIRRHKIVPYTLQQNGVVERMNRTLLER----------VRSMLASSG-L*KRFSG 322
+C + G++ + + Q+ + NR ER +R ++A L + F
Sbjct: 1181 ICEELGLQTGSVKMHCDSQSALALAKNRVFHERTKHVANKYHFIRDIVAQETCLLQEFWA 1240
Query: 323 EAVHTTAYLINRSPSVSLKGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
EA T YLINR+P+ ++ K PE V+SG + D S+L+ F C A+VH
Sbjct: 1241 EATSTAVYLINRTPNSTIDFKLPEEVWSGNRPDLSHLRRFGCTAYVH 1287
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 169 bits (429), Expect = 5e-46
Identities = 77/149 (51%), Positives = 112/149 (75%)
Frame = +2
Query: 17 HSRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGI 196
+SRKVWI+++K K EKFK WK+L+ENQ+ +++ LRTDNGLEFC+ + + C K+GI
Sbjct: 511 YSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGI 570
Query: 197 RRHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSL 376
+RHK V +T QQNG+ ERMNRTL+++ R ML +S L + F EAV+T +YL+NRSPS ++
Sbjct: 571 KRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAI 630
Query: 377 KGKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
K PE +++GK ++ NL+VF C A++H
Sbjct: 631 GFKTPEELWNGKPANYQNLRVFGCPAYLH 659
>emb|CAN80715.1| hypothetical protein VITISV_042933 [Vitis vinifera]
Length = 978
Score = 169 bits (428), Expect = 6e-46
Identities = 81/148 (54%), Positives = 109/148 (73%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
SRKVW++ +KNKSDVFE FK WK+++E +TG +++ LR+DNG ++ + CA YGIR
Sbjct: 308 SRKVWVYFLKNKSDVFETFKKWKSMVEIETGLKVKCLRSDNGGKYIDGGFSEYCAAYGIR 367
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
KI+P T QQNGV ERMN+TL ER RSM +GL K F +AV T YLINR PSV ++
Sbjct: 368 IEKIIPGTPQQNGVAERMNKTLNERARSMRLHAGLPKTFWVDAVSTATYLINRGPSVPME 427
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVH 463
+ PE V+SGK+++FS+LKVF C ++VH
Sbjct: 428 FRLPEEVWSGKEVNFSHLKVFGCISYVH 455
>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 780
Score = 168 bits (425), Expect = 9e-46
Identities = 78/150 (52%), Positives = 108/150 (72%)
Frame = +2
Query: 20 SRKVWIFLMKNKSDVFEKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLCDNLCAKYGIR 199
+R+VW++++K+K++ ++KF++W TLI+NQ +++ LRTDNGLEF + C GI+
Sbjct: 506 TRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFAEFCRNQGIK 565
Query: 200 RHKIVPYTLQQNGVVERMNRTLLERVRSMLASSGL*KRFSGEAVHTTAYLINRSPSVSLK 379
RH+ VP+T QQNG+ ERMNRT+LERVR ML SGL K+F GEA T AYLINR PS +L
Sbjct: 566 RHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINRCPSSALN 625
Query: 380 GKCPEFVFSGKQIDFSNLKVFDCAAFVHQK 469
K P + GK +D+SNL+VF A+ H K
Sbjct: 626 NKTPMEAWHGKPVDYSNLRVFGSLAYAHVK 655