BLASTX nr result
ID: Rehmannia28_contig00007526
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00007526
(568 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth... 89 3e-17
ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II su... 88 6e-17
ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II su... 88 6e-17
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su... 88 6e-17
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su... 88 6e-17
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 87 8e-17
gb|ADE76913.1| unknown [Picea sitchensis] 82 1e-16
ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II su... 87 1e-16
gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus g... 87 1e-16
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 87 1e-16
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 87 2e-16
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 87 2e-16
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su... 87 2e-16
ref|XP_011027835.1| PREDICTED: DNA-directed RNA polymerase II su... 86 3e-16
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 86 3e-16
ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II su... 85 5e-16
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 85 5e-16
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 85 7e-16
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su... 84 1e-15
gb|KYP62923.1| DNA-directed RNA polymerase II subunit RPB2 [Caja... 84 1e-15
>gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus]
Length = 733
Score = 88.6 bits (218), Expect = 3e-17
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRM+TKDIKQAKDQKK+
Sbjct: 690 NKTDIVQVHIPYACKLLFQELMSMAIAPRMMTKDIKQAKDQKKK 733
>ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Nicotiana sylvestris]
Length = 1094
Score = 87.8 bits (216), Expect = 6e-17
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1049 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1092
>ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Nicotiana tomentosiformis]
Length = 1094
Score = 87.8 bits (216), Expect = 6e-17
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1049 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1092
>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 87.8 bits (216), Expect = 6e-17
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1189
>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 87.8 bits (216), Expect = 6e-17
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1189
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 87.4 bits (215), Expect = 8e-17
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKD+KQAKD+KK+
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKQAKDKKKK 1189
>gb|ADE76913.1| unknown [Picea sitchensis]
Length = 135
Score = 81.6 bits (200), Expect = 1e-16
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRM TK++K+ KDQKK+
Sbjct: 89 NKTDIVQVHIPYACKLLFQELMAMAIAPRMFTKEVKELKDQKKK 132
>ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Eucalyptus
grandis] gi|629109448|gb|KCW74594.1| hypothetical protein
EUGRSUZ_E03313 [Eucalyptus grandis]
Length = 1196
Score = 87.0 bits (214), Expect = 1e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIK AKDQKK+
Sbjct: 1151 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQKKK 1194
>gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus grandis]
Length = 1197
Score = 87.0 bits (214), Expect = 1e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIK AKDQKK+
Sbjct: 1152 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQKKK 1195
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 87.0 bits (214), Expect = 1e-16
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKRA 136
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQ+K+Q+K+A
Sbjct: 1155 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQSKEQRKKA 1199
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
tuberosum]
Length = 1191
Score = 86.7 bits (213), Expect = 2e-16
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKRA 136
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+K AKDQKK+A
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQKKKA 1190
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 86.7 bits (213), Expect = 2e-16
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQA+DQKK+
Sbjct: 1150 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQARDQKKK 1193
>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata] gi|604344639|gb|EYU43393.1| hypothetical protein
MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 86.7 bits (213), Expect = 2e-16
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQ+K+QKK+
Sbjct: 1152 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQSKEQKKK 1195
>ref|XP_011027835.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Populus
euphratica]
Length = 1198
Score = 85.9 bits (211), Expect = 3e-16
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKDIKQAK QKK+
Sbjct: 1153 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKQAKSQKKK 1196
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 85.9 bits (211), Expect = 3e-16
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKDIKQAK QKK+
Sbjct: 1170 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKQAKSQKKK 1213
>ref|XP_015066015.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
pennellii]
Length = 1191
Score = 85.1 bits (209), Expect = 5e-16
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+K AKDQKK+
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQKKK 1189
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 85.1 bits (209), Expect = 5e-16
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+K AKDQKK+
Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQKKK 1189
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 84.7 bits (208), Expect = 7e-16
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQV+IPYACKLLFQELMSMAIAPRMLTKDIK AKDQKK+
Sbjct: 1147 NKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQKKK 1190
>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 84.0 bits (206), Expect = 1e-15
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTK++K +KDQKK+
Sbjct: 1144 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKEVKPSKDQKKK 1187
>gb|KYP62923.1| DNA-directed RNA polymerase II subunit RPB2 [Cajanus cajan]
Length = 1194
Score = 84.0 bits (206), Expect = 1e-15
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +2
Query: 2 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 133
NKTDIVQV+IPYACKLLFQELM+MAIAPRMLTKDIK AKDQKK+
Sbjct: 1149 NKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKDIKSAKDQKKK 1192