BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00006863
         (1367 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   501   e-162
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   500   e-162
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         497   e-160
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]   487   e-157
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   484   e-156
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   483   e-155
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]   467   e-155
gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposo...   442   e-149
gb|KYP63121.1| Retrovirus-related Pol polyprotein from transposo...   434   e-148
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           458   e-146
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]   441   e-142
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   443   e-141
gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina]   443   e-139
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo...   426   e-137
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   431   e-136
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   429   e-135
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    428   e-134
gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposo...   405   e-131
emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]   396   e-130
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]   409   e-127

>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  501 bits (1290), Expect = e-162
 Identities = 250/443 (56%), Positives = 311/443 (70%), Gaps = 1/443 (0%)
 Frame = -1

Query: 1328 ENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRDQKNGNNENK 1149
            +N+ RGRSK R                    C+YCG   H + +CR  KRDQK       
Sbjct: 208  KNETRGRSKSRDQYQSRGRSKSRSKIT----CYYCGRMGHRKMECRSFKRDQK------- 256

Query: 1148 IDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFTSYTGGSFGK 969
                       +  + II +   ++ A   + WI+DSGAS+H+TPH   F+SY  G FG 
Sbjct: 257  ----------AEDMLYIIREGNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGT 306

Query: 968  VRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDAGYDNHFGEG 789
            V+M N   +++VGIG+IIL T TG RLVLKDVRH+P +RLN+IS GKLDDAG  N+FGEG
Sbjct: 307  VQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFGEG 366

Query: 788  KWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHLSQKGLEVLT 609
            KWKLTKGSL++A+G+K+ SLY+MQA+L  GEVN    +  IE+WHKRLGH+S+KGL +L 
Sbjct: 367  KWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNIT--TDDIEVWHKRLGHISEKGLHILA 424

Query: 608  RKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPS-RKSHPLDLVHTDLCYMKDRSLGGA 432
            RK+LL  V    L  C  CL GKQHRVAF+  SP  R+ + LDLVHTD+C M ++S+GGA
Sbjct: 425  RKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRSSPPVRRKNILDLVHTDVCSMSEKSIGGA 484

Query: 431  IYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADNGGEYQGPFE 252
            +YFVTFIDD SRKVW   LKSKDQVL  FK F A VERETG+K+K VR+DNGGEY+GPFE
Sbjct: 485  LYFVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFE 544

Query: 251  QHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGEAMRTAVDLI 72
             +C+ HGI+LEK+ PKTPQ NG+AERMNRTI ERV+C+LSH+ LPK FWGEA+   VD++
Sbjct: 545  TYCKKHGIRLEKTPPKTPQLNGLAERMNRTIEERVRCVLSHAKLPKLFWGEAIMAVVDIV 604

Query: 71   NLSPSAPLGGDIPDRVWTGKDVS 3
            NL+PS PLGG IPD VWTGK  S
Sbjct: 605  NLTPSVPLGGAIPDEVWTGKRAS 627


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  500 bits (1288), Expect = e-162
 Identities = 249/443 (56%), Positives = 311/443 (70%), Gaps = 1/443 (0%)
 Frame = -1

Query: 1328 ENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRDQKNGNNENK 1149
            +N+ RGRSK R                    C+YCG   H + +CR  KRDQK       
Sbjct: 208  KNETRGRSKSRDQYQSRGRSKSRSKIT----CYYCGRMGHRKMECRSFKRDQK------- 256

Query: 1148 IDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFTSYTGGSFGK 969
                       +  + II +   ++ A   + WI+DSGAS+H+TPH   F+SY  G FG 
Sbjct: 257  ----------AEDMLYIIREGNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGT 306

Query: 968  VRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDAGYDNHFGEG 789
            V+M N   +++VGIG+IIL T TG RLVLKDVRH+P +RLN+IS GKLDDAG  N+FGEG
Sbjct: 307  VQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFGEG 366

Query: 788  KWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHLSQKGLEVLT 609
            KWKLTKGSL++A+G+K+ SLY+MQA+L  GEVN    +  +E+WHKRLGH+S+KGL +L 
Sbjct: 367  KWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNIT--TDDLEVWHKRLGHISEKGLHILA 424

Query: 608  RKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPS-RKSHPLDLVHTDLCYMKDRSLGGA 432
            RK+LL  V    L  C  CL GKQHRVAF+  SP  R+ + LDLVHTD+C M ++S+GGA
Sbjct: 425  RKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRSSPPVRRKNILDLVHTDVCSMSEKSIGGA 484

Query: 431  IYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADNGGEYQGPFE 252
            +YFVTFIDD SRKVW   LKSKDQVL  FK F A VERETG+K+K VR+DNGGEY+GPFE
Sbjct: 485  LYFVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFE 544

Query: 251  QHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGEAMRTAVDLI 72
             +C+ HGI+LEK+ PKTPQ NG+AERMNRTI ERV+C+LSH+ LPK FWGEA+   VD++
Sbjct: 545  TYCKKHGIRLEKTPPKTPQLNGLAERMNRTIEERVRCVLSHAKLPKLFWGEAIMAVVDIV 604

Query: 71   NLSPSAPLGGDIPDRVWTGKDVS 3
            NL+PS PLGG IPD VWTGK  S
Sbjct: 605  NLTPSVPLGGAIPDEVWTGKRAS 627


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  497 bits (1279), Expect = e-160
 Identities = 239/452 (52%), Positives = 316/452 (69%), Gaps = 1/452 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            +S S++ +   D RGR+K +G +                +CHYCG  +H ++   K KR+
Sbjct: 191  TSTSQSDILVTDDRGRNKQKGQRGRDKSRSKSRSRYKDIECHYCGKKSHIKKYSFKWKRE 250

Query: 1175 QKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFT 996
            +K    +NK  D     A V  D+++ CDD  I+ AC +T WI+DSGA+YH+TP ++ FT
Sbjct: 251  KKQ---DNKDGDTGNQVATVRADLLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFT 307

Query: 995  SYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDA 816
            SYT G FG++RM N G  +V G G + L T  G++LVLK+V+H PDIRLN+ISTGKLDD 
Sbjct: 308  SYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKLVLKNVKHAPDIRLNLISTGKLDDD 367

Query: 815  GYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHL 636
            G+   FG+G WK+TKGSL+VA+G K ++LY +Q+ +S+  VN ++K  + ELWHKRLGH+
Sbjct: 368  GFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSVSDDSVNVVEKECASELWHKRLGHM 427

Query: 635  SQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLC-Y 459
            S KG++ L +K  L  V    L  CV CL GKQ RV+F S  P+RKS PLDL+H+D+C  
Sbjct: 428  SVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRRVSFMSHPPTRKSEPLDLIHSDVCGP 487

Query: 458  MKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADN 279
            MK RSLGGA YFVTFIDD+SRK+W + LK K  VLG+FK F A VER+TGKKLK +R DN
Sbjct: 488  MKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDN 547

Query: 278  GGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGE 99
            GGEY GPF+++CR +GI+ +K+ PK PQ NG+AERMNRTI ERV+CML  + LP SFW E
Sbjct: 548  GGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAE 607

Query: 98   AMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            A+ TAV +INLSP   L  ++PD+VW GKDVS
Sbjct: 608  AVSTAVHVINLSPVIALKNEVPDKVWCGKDVS 639


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score =  487 bits (1254), Expect = e-157
 Identities = 232/444 (52%), Positives = 310/444 (69%), Gaps = 4/444 (0%)
 Frame = -1

Query: 1322 DKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRDQKNGNNENKID 1143
            +KRG SK RG +N                CHYC    H ++ CR+ KRD K G  + K +
Sbjct: 66   EKRGXSKSRGPKNRDRSKSKTNKXANVE-CHYCHLKGHIKKYCRQLKRDMKQGKVKEKKN 124

Query: 1142 D---KDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFTSYTGGSFG 972
            D   +D   A    D +I+ D   ++ ACQ+T W+IDSGAS H TP +D FTSYT G FG
Sbjct: 125  DNGGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFG 184

Query: 971  KVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDAGYDNHFGE 792
             VRM N G  + +G+G++ L T  G+ L LK+V+HIPDIR+N+ISTGKLDD G+ N F +
Sbjct: 185  SVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRD 244

Query: 791  GKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHLSQKGLEVL 612
             +WKLT+GS+ +AKG K +SLYLMQAR+ +  +NA+D  S+ ELWH RLGH+S+KGL +L
Sbjct: 245  SQWKLTRGSMXIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMIL 304

Query: 611  TRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLC-YMKDRSLGG 435
             +K LL  +    L+ C  CL GK  RVAFK+   +RK   LDLV+ D+C  MK ++L G
Sbjct: 305  AKKNLLSXMKKGSLKRCAHCLAGKXTRVAFKTLHHTRKPGMLDLVYFDVCGPMKTKTLXG 364

Query: 434  AIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADNGGEYQGPF 255
            ++YFVTFIDD SRK+W + LK KDQVL +FK F A VER++G+KLK +R DNGGEY GPF
Sbjct: 365  SLYFVTFIDDHSRKIWVYTLKXKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPF 424

Query: 254  EQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGEAMRTAVDL 75
            +++CR HGI+ +K+ PKTPQ NG+AERMNRT+ ERV+C+LS S LP+SFWGEA+ T V +
Sbjct: 425  DEYCRQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHV 484

Query: 74   INLSPSAPLGGDIPDRVWTGKDVS 3
            +NL+P  PL  D+PDR+W+  ++S
Sbjct: 485  LNLTPCVPLEFDVPDRIWSNNEIS 508


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  484 bits (1247), Expect = e-156
 Identities = 233/455 (51%), Positives = 316/455 (69%), Gaps = 4/455 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            SS+S  LV    K GRSK RG +N                CHYC    H ++ CR+ KRD
Sbjct: 170  SSQSNVLVIX--KXGRSKSRGPKNRDRSKSKTNKFANVE-CHYCHLKGHIKKYCRQLKRD 226

Query: 1175 QKNGNNENKIDD---KDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRD 1005
             K G  + K +D   +D   A    D +I+ D   ++ ACQ++ W+ID GAS H TP +D
Sbjct: 227  MKQGKVKEKKNDNGGEDDQVATTISDFLIVYDSDVVNFACQESXWVIDXGASIHATPQKD 286

Query: 1004 MFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKL 825
             FTSYT G FG VRM N G  + +G+G++ L T  G+ L LK+V+HIPDIR+N+ISTGKL
Sbjct: 287  FFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKL 346

Query: 824  DDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRL 645
            DD G+ N F + +WKLT+GS+++AKG K +SLYLMQAR+ +  +NA+D  S+ ELWH +L
Sbjct: 347  DDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNKL 406

Query: 644  GHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDL 465
            GH+S+KGL +L +K LL  +    L+ C  CL GKQ RVAFK+   +RK   LDLV++D+
Sbjct: 407  GHMSEKGLMILAKKNLLXGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGMLDLVYSDV 466

Query: 464  C-YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVR 288
               MK ++LGG++YFVTFIDD SRK+W + LK+KDQVL +FK F A VER++G+KLK +R
Sbjct: 467  YGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIR 526

Query: 287  ADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSF 108
             DNGGEY GPF+++CR HG + +K+ PKTPQ NG+AERMNRT+ ERV+C+LS S LP+SF
Sbjct: 527  TDNGGEYSGPFDEYCRQHGFRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSF 586

Query: 107  WGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            WGEA+ T V ++NL+P  PL  D+PDR+W+  ++S
Sbjct: 587  WGEALNTIVHVLNLTPCVPLEFDVPDRIWSNNEIS 621


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  483 bits (1242), Expect = e-155
 Identities = 236/444 (53%), Positives = 312/444 (70%), Gaps = 7/444 (1%)
 Frame = -1

Query: 1322 DKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRDQKNGN------ 1161
            D RGRSK R  +                 C+YCG P H + +CR  K+DQ+ G       
Sbjct: 194  DNRGRSKNR-EKGGRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKKDQQAGTVHPDQI 252

Query: 1160 NENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFTSYTGG 981
            +  K  +  TT A    DV ++ ++  ++ A  +  WIIDSGAS+H+TPH + F+SY  G
Sbjct: 253  DPRKKKEDGTTTAVTSDDVFLVGEENYLNIAFDECIWIIDSGASFHVTPHEEFFSSYQKG 312

Query: 980  SFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDAGYDNH 801
             FG V+M NH  +++VGIG I L T+ G++L+LK+VRH+PD+RLN+IS  KLD+AG  N 
Sbjct: 313  DFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDMRLNLISVSKLDEAGMINQ 372

Query: 800  FGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHLSQKGL 621
            F   +WKL++GS+IVA+G+K+ SLY MQ ++  G++N + + +S ELWH+RLGH+S+KGL
Sbjct: 373  FSADRWKLSRGSMIVARGKKEGSLYTMQGKICKGDMN-VAQDASKELWHRRLGHMSEKGL 431

Query: 620  EVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRK-SHPLDLVHTDLCYMKDRS 444
            E+L  K  LP +   PL++C DCL GKQHRV+F+    +R+  H LDLVH+D+C   +RS
Sbjct: 432  EILA-KDHLPNIKGQPLESCEDCLAGKQHRVSFRRPDDARRRKHILDLVHSDVCSTSERS 490

Query: 443  LGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADNGGEYQ 264
            +GGA YFVTFIDD SRKVW + LK+KDQVL  FK F A VER TG+KLK +R DNGGEY 
Sbjct: 491  IGGAQYFVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHALVERATGRKLKCIRTDNGGEYL 550

Query: 263  GPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGEAMRTA 84
            GPFE +C+ HGI+ EK  PKTPQ NGVAERMNRTI E+V+ MLSH+ +PKSFWGEA+ TA
Sbjct: 551  GPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAKIPKSFWGEAVLTA 610

Query: 83   VDLINLSPSAPLGGDIPDRVWTGK 12
             DLINLSPS PL G+IP+ VW+GK
Sbjct: 611  ADLINLSPSRPLNGEIPEEVWSGK 634


>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
          Length = 776

 Score =  467 bits (1202), Expect = e-155
 Identities = 235/455 (51%), Positives = 300/455 (65%)
 Frame = -1

Query: 1367 ELEYSSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRK 1188
            +L  SS  +ALV E  +R +S+   +                 KC +     H +R C+K
Sbjct: 269  KLGISSNIEALVIERQRRSKSRKPSNDYNCDKSRGKSKSLKEIKCFHYDKLGHIKRKCKK 328

Query: 1187 KKRDQKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHR 1008
             +R+Q  G  E + +DKD    A DGD  I+CDDAC++ ACQ + W++D+  S+HIT H+
Sbjct: 329  IRREQFKGKCEEQKEDKDIVVVASDGDTTIVCDDACVNLACQDSTWVVDTAMSFHITTHK 388

Query: 1007 DMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGK 828
            D F+SYT GSFG VRM N    E+VG+ ++ L T  G ++V KDVRH+P++  ++IS GK
Sbjct: 389  DFFSSYTSGSFGWVRMGNEAKCEIVGMRDVELETSIGCKMVFKDVRHVPEMCFSLISIGK 448

Query: 827  LDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKR 648
             DD GY +H GE K                N+LY  +ARL  GEVN ++  +S ELWHKR
Sbjct: 449  FDDEGYHSHLGEEK----------------NTLYKTKARLVKGEVNIVENEASTELWHKR 492

Query: 647  LGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTD 468
            L H+S+KGL+VLTRKK LP +    L  C  CL GKQ RVAF  F   RK   LDLVH D
Sbjct: 493  LSHISEKGLQVLTRKKFLP-IKGTSLLPCTHCLSGKQSRVAFHKFPSRRKPDILDLVHFD 551

Query: 467  LCYMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVR 288
            +C M+  +LGGA+Y+VTFIDD SRKVW +ALKSK Q L +FK+F   +ER+TGK+LK VR
Sbjct: 552  VCTMQSNTLGGALYYVTFIDDHSRKVWAYALKSKYQALDVFKDFHVKIERQTGKQLKYVR 611

Query: 287  ADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSF 108
              NG EY+GPFEQ+CR HGIKLEK V KTPQ N VA++MNRTIC+R++CMLSH+ L KSF
Sbjct: 612  VYNGHEYRGPFEQYCRSHGIKLEKIVHKTPQQNDVAKKMNRTICDRIRCMLSHAKLLKSF 671

Query: 107  WGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
             GEAMRT +DLINLSPS PL GD+P RV T K VS
Sbjct: 672  RGEAMRTTIDLINLSPSYPLEGDLPKRVLTRKFVS 706


>gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 497

 Score =  442 bits (1137), Expect = e-149
 Identities = 209/415 (50%), Positives = 290/415 (69%), Gaps = 4/415 (0%)
 Frame = -1

Query: 1235 CHYCGGPNHYERDC---RKKKRDQKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSAC 1065
            CHYC    H +R+C   +K+ + +K    E   D  D  A A   D+VI+ D   ++   
Sbjct: 16   CHYCHKTGHIQRNCFLWKKENKGKKGKYKEKDHDGDDRVATATCDDLVILSDHGSVNLVS 75

Query: 1064 QQTDWIIDSGASYHITPHRDMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLV 885
             ++ WI+DSGA+ H+TP ++ FTSYT G FG ++M N GV++V+G+G++ L T+ G +L+
Sbjct: 76   DESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLL 135

Query: 884  LKDVRHIPDIRLNIISTGKLDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLS 705
            L+ V+H PD+R N+IS   LDD GYDNHFG GKWKLTKG+L++A G+K + LY  +A ++
Sbjct: 136  LRGVKHAPDVRFNLISLQILDDGGYDNHFGSGKWKLTKGNLVMAGGEKNSKLYWTKALVA 195

Query: 704  NGEVNAIDKSSSIELWHKRLGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVA 525
               VNA+D  +S  LWH+RL H+S+ GL  L +K +L  + S+ L+ C  C+ GKQ RV 
Sbjct: 196  KDSVNAMDMEAS--LWHRRLSHISENGLNCLAKKDVLQGLKSVELEKCSYCMAGKQTRVF 253

Query: 524  FKSFSPSRKSHPLDLVHTDLCY-MKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGI 348
            FK   PSRK   L LVH+D+C  +K ++  GA+YFVTFIDD SRK+W +AL  KDQVL  
Sbjct: 254  FKKHPPSRKLELLKLVHSDVCGPLKVKAFSGALYFVTFIDDCSRKLWVYALSRKDQVLEG 313

Query: 347  FKNFQASVERETGKKLKRVRADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMN 168
            FK F A VER++GKKLKR+R DNGGEY GPF+ +C+ HGI  +K+ PKTPQ NG+AERMN
Sbjct: 314  FKQFHALVERQSGKKLKRIRTDNGGEYCGPFDVYCKKHGIAHKKTPPKTPQLNGLAERMN 373

Query: 167  RTICERVKCMLSHSNLPKSFWGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            RT+ ERV+CMLS + LPK FWGEA+ T V +INL+P+  L  ++P+++W GK+ S
Sbjct: 374  RTLLERVRCMLSDAKLPKHFWGEALYTVVHVINLTPTVILNSEVPEKIWFGKNAS 428


>gb|KYP63121.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 344

 Score =  434 bits (1116), Expect = e-148
 Identities = 208/318 (65%), Positives = 254/318 (79%), Gaps = 1/318 (0%)
 Frame = -1

Query: 962 MANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDAGYDNHFGEGKW 783
           M N   +++VGIG+IIL T TG RLVLKDVRH+P +RLN+IS GKLDDAG  N+FGEGKW
Sbjct: 1   MGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFGEGKW 60

Query: 782 KLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHLSQKGLEVLTRK 603
           KLTKGSL++A+G+K+ SLY+MQA+L  GEVN    +  IE+WHKRLGH+S+KGL +L RK
Sbjct: 61  KLTKGSLVIARGKKEGSLYVMQAKLCKGEVNIT--TDDIEVWHKRLGHISEKGLHILARK 118

Query: 602 KLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPS-RKSHPLDLVHTDLCYMKDRSLGGAIY 426
           +LL  V    L  C  CL GKQHRVAF+  SP  R+ + LDLVHTD+C M ++S+GGA+Y
Sbjct: 119 QLLSNVKGKSLDPCAHCLAGKQHRVAFQRSSPPVRRKNILDLVHTDVCSMSEKSIGGALY 178

Query: 425 FVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADNGGEYQGPFEQH 246
           FVTFIDD SRKVW   LKSKDQVL  FK F A VERETG+K+K VR+DNGGEY+GPFE +
Sbjct: 179 FVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFETY 238

Query: 245 CRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGEAMRTAVDLINL 66
           C+ HGI+LEK+ PKTPQ NG+A+RMNRTI ERV+C+LSH+ LPKSFWGEA+   VD++NL
Sbjct: 239 CKKHGIRLEKTPPKTPQLNGLAKRMNRTIEERVRCVLSHAKLPKSFWGEAIMAVVDIVNL 298

Query: 65  SPSAPLGGDIPDRVWTGK 12
           +PS PLGG IPD VW GK
Sbjct: 299 TPSVPLGGTIPDEVWMGK 316


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  458 bits (1178), Expect = e-146
 Identities = 224/453 (49%), Positives = 310/453 (68%), Gaps = 2/453 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            SS+S+ L      RGRS+ + SQ+               +CHYC    H +R CR+ + D
Sbjct: 193  SSQSEVLAVTT--RGRSQNK-SQSNRDKSRGKSNKFANVECHYCKKKGHIKRFCRQFQND 249

Query: 1175 QKNGNNENKIDDKDTTAAAVD--GDVVIICDDACISSACQQTDWIIDSGASYHITPHRDM 1002
            QK  N   K+  ++++    +  G+  ++ DD  I+   Q+  W+IDSGA+ H TP R++
Sbjct: 250  QKK-NKGKKVKPEESSDDETNSFGEFNVVYDDDIINLTTQEMTWVIDSGATIHATPRREL 308

Query: 1001 FTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLD 822
            F+SYT G FG+V+M N   + VVG G++ L T  G +L+L+DVRH+PD+RLN+IS  KLD
Sbjct: 309  FSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLD 368

Query: 821  DAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLG 642
            + GY N F  G+WKLTKGSL+VA+G KQ+ LY+ QA +S   +N  +  S+I+LWH+RLG
Sbjct: 369  EEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASISQQVINVAENDSNIKLWHRRLG 428

Query: 641  HLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLC 462
            H+S+K +  L +K  LP +  + L+ C DCL GKQ+RV+FK F PSR+ + LDLVH+D+C
Sbjct: 429  HMSEKSMARLVKKNALPGLNQIQLKKCADCLAGKQNRVSFKRFPPSRRQNVLDLVHSDVC 488

Query: 461  YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRAD 282
                +SLGGA YFVTFIDD SRK W + LK+KDQV  +FK F   VERETGKKLK +R D
Sbjct: 489  GPFKKSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERETGKKLKCIRTD 548

Query: 281  NGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWG 102
            NGGEYQG F+ +C++HGI+ + + PKTPQ NG+AERMNRT+ ER +C+LSHS LPK+FWG
Sbjct: 549  NGGEYQGQFDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWG 608

Query: 101  EAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            EA+ TA  ++N SP  PL    P+++W G+D+S
Sbjct: 609  EALVTAAYVLNHSPCVPLQYKAPEKIWLGRDIS 641


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score =  441 bits (1133), Expect = e-142
 Identities = 204/395 (51%), Positives = 283/395 (71%), Gaps = 1/395 (0%)
 Frame = -1

Query: 1187 KKRDQKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHR 1008
            K +++KN N       +D   A    D +I+ D   ++ ACQ+T W+IDSGAS H TP +
Sbjct: 5    KVKEKKNDNG-----GEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRK 59

Query: 1007 DMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGK 828
            D FTSYT   FG VRM N G+ + +G+G++ L T  G+ L LK+V+HIPDIR+N+IST K
Sbjct: 60   DFFTSYTFSDFGSVRMGNDGLAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTRK 119

Query: 827  LDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKR 648
            LDD G  N F + +WKLT+GS+++ K  K +SLYLMQ R+ +  +NA+D  S+ +LWH R
Sbjct: 120  LDDEGLCNTFRDSQWKLTRGSMVITKENKSSSLYLMQVRVIDSSINAVDDDSTFKLWHNR 179

Query: 647  LGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTD 468
            L H+S+KGL ++ +K LL  +    L+ C  CL GKQ RVAFK+   +RK   LDLV++D
Sbjct: 180  LSHMSEKGLMIMAKKNLLSGMKKGSLKRCAHCLGGKQTRVAFKTLHHTRKPGMLDLVYSD 239

Query: 467  LC-YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRV 291
            +C  MK ++LGG++YFVTFIDD SRK+W + LK+KDQVL +FK F A VER++G+KLK +
Sbjct: 240  VCGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCI 299

Query: 290  RADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKS 111
            + DNGGEY  PF+++CR HGI+ +K+ PKTPQ NG+AE MNRT+ ERV+C+LS S LP+S
Sbjct: 300  QIDNGGEYSSPFDEYCRQHGIRHQKTPPKTPQLNGLAESMNRTLVERVRCLLSQSQLPRS 359

Query: 110  FWGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDV 6
            FWGEA+ T V L+NL+P  PL  D+PDR+W+  ++
Sbjct: 360  FWGEALNTVVHLLNLTPCVPLEFDVPDRIWSNNEI 394


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  443 bits (1140), Expect = e-141
 Identities = 223/455 (49%), Positives = 297/455 (65%), Gaps = 4/455 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            SS+S  LV E  KRGRSK RG +N                CHYC    H ++ CR+ KRD
Sbjct: 97   SSQSSVLVIE--KRGRSKSRGPKNRDRSKNKTNKFANVE-CHYCHLKGHIKKYCRQLKRD 153

Query: 1175 QKNGNNENKIDD---KDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRD 1005
             K G  + K +D   +D   A    D  I+ D                           D
Sbjct: 154  MKQGKVKEKKNDNGGEDDQVATTTSDFFIVYDSDV------------------------D 189

Query: 1004 MFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKL 825
             FTSYT G FG VRM N    + +G+ N+ L T  G+ L LK+V+HIPDIR+N+ISTGKL
Sbjct: 190  FFTSYTSGDFGSVRMGNDDSAKAIGMRNVRLETSNGTMLTLKNVKHIPDIRMNLISTGKL 249

Query: 824  DDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRL 645
            DD G+ N F + +WKLT+GS+++AKG K +SLYLMQ R+ +  +NA+D  S+ ELWH RL
Sbjct: 250  DDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNRL 309

Query: 644  GHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDL 465
            GH+S+KGL +L +K LL  +    L+ C  CL GKQ RVAFK+   +RK   LDLV++D+
Sbjct: 310  GHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDV 369

Query: 464  CY-MKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVR 288
            C  MK ++LGG++YFVTFIDD SRK+W + LK+KDQVL +FK F A VER++G+KLK +R
Sbjct: 370  CGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIR 429

Query: 287  ADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSF 108
             DNGGEY  PF+++CR HGI+ +K+ PKTPQ NG+AERMNRT+ ERV+C+LS S LP+SF
Sbjct: 430  TDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSF 489

Query: 107  WGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            WGEA+ T V ++NL+P  PL  D+PDR+W+  ++S
Sbjct: 490  WGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEIS 524


>gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina]
          Length = 1415

 Score =  443 bits (1139), Expect = e-139
 Identities = 206/355 (58%), Positives = 275/355 (77%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1064 QQTDWIIDSGASYHITPHRDMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLV 885
            + T W++DSGA+ H T  RD+FT+Y+      V+M N  + +V GIG+I L T TG+RL+
Sbjct: 55   EDTSWVVDSGATTHATSQRDLFTTYS------VKMGNDAIAKVAGIGDICLETSTGTRLL 108

Query: 884  LKDVRHIPDIRLNIISTGKLDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLS 705
            LK V+H+PDIRLN+ISTGKLDD G+ + FG GKWKLT+GS+++A+G K +  Y MQA++S
Sbjct: 109  LKGVKHVPDIRLNLISTGKLDDEGFYSLFGGGKWKLTRGSMVMARGDKHSFFYWMQAKVS 168

Query: 704  NGEVNAIDKSSSIELWHKRLGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVA 525
               VN ++   +IELWHKRLGH+S+KGL VL++K+ +P ++ + LQ C  C  GKQHRV+
Sbjct: 169  KDIVNVVENDDAIELWHKRLGHMSEKGLSVLSKKEAIPGISGLHLQKCAYCFAGKQHRVS 228

Query: 524  FKSFSPSRKSHPLDLVHTDLCY-MKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGI 348
            F S SPSRK   LDLVH+D+C  +K +SLGGA YFVTFIDD SRK+W + +K+KD VLG 
Sbjct: 229  FTSSSPSRKPDILDLVHSDVCSPLKTKSLGGASYFVTFIDDHSRKLWVYTMKTKDYVLGY 288

Query: 347  FKNFQASVERETGKKLKRVRADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMN 168
            FK+F A VER+TGKKLK +R+DNGGEY GPF+ +CR+HGI+ +K+ PKTPQ   +AERMN
Sbjct: 289  FKHFVALVERQTGKKLKCIRSDNGGEYSGPFDAYCREHGIRHQKTPPKTPQLKRLAERMN 348

Query: 167  RTICERVKCMLSHSNLPKSFWGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            +TI ER++C++S S L ++FWGEA+ + V L+N SPSAPL GDIP+RVWTGKDVS
Sbjct: 349  KTIVERIRCLISESGLAQTFWGEALSSVVHLLNFSPSAPLEGDIPERVWTGKDVS 403


>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 990

 Score =  426 bits (1096), Expect = e-137
 Identities = 217/453 (47%), Positives = 296/453 (65%), Gaps = 2/453 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXK-CHYCGGPNHYERDCRKKKR 1179
            SS+SK LV EN  RGRS+ +  +                  CHYC    H +R+C   K+
Sbjct: 133  SSQSKVLVTEN--RGRSQKKEPKGGREKSRSKSKSRYKNVECHYCHKTWHIQRNCFLWKK 190

Query: 1178 DQKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMF 999
            + K G   N + D+                            WI+DSGA+ H+TP ++ F
Sbjct: 191  ENK-GKKVNLVSDESM--------------------------WIVDSGATLHVTPRKEFF 223

Query: 998  TSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDD 819
            TSYT G FG ++M N GV++V+G+G++ L T+ G +L+L+ V+H+PD+R N+IS   LDD
Sbjct: 224  TSYTSGDFGVLKMGNDGVSKVIGVGDVFLQTNMGMQLLLRGVKHVPDVRFNLISVQILDD 283

Query: 818  AGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGH 639
             GYDNHFG GKWKLTKG+L+VA+G+K + LY  +A ++   VNA+D  +S  LWH+RL H
Sbjct: 284  GGYDNHFGSGKWKLTKGNLVVARGEKNSKLYWTKALVAKDNVNAMDMEAS--LWHRRLSH 341

Query: 638  LSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLC- 462
            +S+KGL  L +K +L  +    L+ C  C+ GKQ RV+FK   PSRKS  L LVH+D+C 
Sbjct: 342  ISEKGLNCLAKKDVLQGLKIAELEKCSHCMAGKQTRVSFKKHPPSRKSKLLQLVHSDVCG 401

Query: 461  YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRAD 282
             +K +S  GA+YFVTFIDD S+K+W +AL+ KD VL  FK F A VER++GKKLKR+R D
Sbjct: 402  PLKVKSFSGALYFVTFIDDCSKKLWVYALQRKD-VLERFKQFHALVERQSGKKLKRIRTD 460

Query: 281  NGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWG 102
            NGGEY GPF+ +C+ HGI  EK+ PKTPQ N +AERMN T+ ERV+CMLS + LPK FWG
Sbjct: 461  NGGEYCGPFDVYCKQHGIAHEKTPPKTPQLNDLAERMNMTLLERVRCMLSDAKLPKHFWG 520

Query: 101  EAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            EA+ TAV +INL+P+  L  ++PD++W GK+ S
Sbjct: 521  EALYTAVHVINLTPTVILNSEVPDKIWFGKNAS 553


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  431 bits (1109), Expect = e-136
 Identities = 217/459 (47%), Positives = 306/459 (66%), Gaps = 9/459 (1%)
 Frame = -1

Query: 1352 SESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXK----CHYCGGPNHYERDCRKK 1185
            ++ +AL+ E   RGRS  R S N                    C+ C  P H++RDC   
Sbjct: 191  NQGQALITEG--RGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNP 248

Query: 1184 KRDQKNGNNENKIDDKDTTAAAVDGDVVIIC---DDACISSACQQTDWIIDSGASYHITP 1014
            ++ +  G    + +D +T A   + D V++    ++ C+  +  +++W++D+ AS+H TP
Sbjct: 249  RKGK--GETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATP 306

Query: 1013 HRDMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIIST 834
             RD+F  Y  G FG V+M N   +++ GIG+I + T+ G  LVLKDVRH+PD+R+N+IS 
Sbjct: 307  VRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISG 366

Query: 833  GKLDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWH 654
              LD  GY+++F   KW+LTKGSL++AKG  + +LY   A +  GE+NA     S++LWH
Sbjct: 367  IALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWH 426

Query: 653  KRLGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVH 474
            KR+GH+S+KGL++L +K L+       ++ C  CL GKQHRV+F++ S  RK + LDLV+
Sbjct: 427  KRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQT-SSERKLNILDLVY 485

Query: 473  TDLC-YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLK 297
            +D+C  M+  S+GG  YFVTFIDD SRK+W + LK+KDQV  +F+ F A VERETG+KLK
Sbjct: 486  SDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLK 545

Query: 296  RVRADNGGEYQG-PFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNL 120
            R+R+DNGGEY    FE++C  HGI+ EK+VP TPQHNGVAERMNRTI E+V+ ML  + L
Sbjct: 546  RLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKL 605

Query: 119  PKSFWGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            PKSFWGEA++TA  LIN SPS PL  +IP+RVWT K+VS
Sbjct: 606  PKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVS 644


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  429 bits (1102), Expect = e-135
 Identities = 221/454 (48%), Positives = 301/454 (66%), Gaps = 4/454 (0%)
 Frame = -1

Query: 1352 SESKALVAENDKRGRSKF-RGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            +E+ ALV E   R +S+  RG ++                C+ CG P H +++CR  K++
Sbjct: 193  NETHALVTERRSRSKSRTPRGHRDHSKSRERRS-------CYNCGKPGHLKKNCRFLKKE 245

Query: 1175 QKNGNNENKIDDKDTTAAAVDGDVVIICDDA-CISSACQQTDWIIDSGASYHITPHRDMF 999
             ++ N  N  +   TT+A+ D ++ ++C+   C   A    +WIIDS ASYH  P R+ F
Sbjct: 246  IQDKNQANDRNTAATTSAS-DDEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYF 304

Query: 998  TSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDD 819
            T+Y  G FG V M N   +++VGIG+I L T  G  L+LKDVRHIPDIRLN+IS   LD 
Sbjct: 305  TTYRKGDFGHVNMGNKSTSQIVGIGDIHLQTGVGCTLILKDVRHIPDIRLNLISVNVLDK 364

Query: 818  AGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGH 639
             GY++    G+WKLTKGSL+VAKG+   +LY    ++  G++NA++  +S  LWH+RL H
Sbjct: 365  EGYEHSMKGGRWKLTKGSLVVAKGKLCCTLYKTYVKVCKGQLNAVENDASPNLWHRRLAH 424

Query: 638  LSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLC- 462
            +S+KGL++L ++ L+P+     L  C  C+ GK HRV+FK  S +RK + L+LVH+D+C 
Sbjct: 425  ISEKGLQLLAKQSLIPQAKGDFLNPCDYCVFGKHHRVSFKK-SSNRKKNKLELVHSDVCG 483

Query: 461  YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRAD 282
             M+  SLGG  YFVTFIDD SRK W + L++K QV   F+ F A VERETGK+LK +R D
Sbjct: 484  PMEVESLGGNKYFVTFIDDASRKTWVYLLQAKSQVFQCFQQFHAMVERETGKQLKCIRTD 543

Query: 281  NGGEY-QGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFW 105
            NGGEY    F+ +C  +GI+ EK+VP TPQHNG+AERMNRTI E+V+CML  + LPK FW
Sbjct: 544  NGGEYISKEFKDYCSKYGIRHEKTVPGTPQHNGIAERMNRTIVEKVRCMLRMAKLPKPFW 603

Query: 104  GEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            GEA++TAV LIN  PS PLG DIP+RVW GK+VS
Sbjct: 604  GEAVQTAVYLINRLPSVPLGFDIPERVWAGKEVS 637


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  428 bits (1101), Expect = e-134
 Identities = 216/458 (47%), Positives = 302/458 (65%), Gaps = 9/458 (1%)
 Frame = -1

Query: 1349 ESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXK----CHYCGGPNHYERDCRKKK 1182
            E+   V   + RGRS  R S N                    C+ C  P H++RDC   K
Sbjct: 191  ENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKARNCYNCDQPGHFKRDCPNPK 250

Query: 1181 RDQKNGNNENKIDDKDTTAAAVDGDVVIIC---DDACISSACQQTDWIIDSGASYHITPH 1011
            R +  G +  + +D +T A   + D V++    ++ C+  A  +++W++D+ ASYH TP 
Sbjct: 251  RGK--GESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHLAGTESEWVVDTAASYHATPV 308

Query: 1010 RDMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTG 831
            RD+F  Y  G +G V+M N   +++ GIG+I   T+ G  LVLKDVRH+PD+R+N+IS  
Sbjct: 309  RDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGI 368

Query: 830  KLDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHK 651
             LD  GY+N+F   KW+LTKG+L++AKG  + +LY   A +  GE+NA  + +S +LWHK
Sbjct: 369  ALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLWHK 428

Query: 650  RLGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHT 471
            R+GH S+KGL++L++K L+       ++ C   L GKQHRV+F++ S  RKS+ LDLV++
Sbjct: 429  RMGHTSEKGLQILSKKSLISFTKGTTIKPCNYWLFGKQHRVSFQT-SSERKSNILDLVYS 487

Query: 470  DLC-YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKR 294
            D+C  M+  S+GG  YFVTFIDD SRK+W +  ++KDQV  +F+ F A VERETG+K KR
Sbjct: 488  DVCGPMEIESMGGNKYFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHALVERETGRKRKR 547

Query: 293  VRADNGGEYQG-PFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLP 117
            +R DNGGEY    FE++C +HGI+ EK+VP TPQHNGVAERMNRTI E+V+ ML  + LP
Sbjct: 548  LRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 607

Query: 116  KSFWGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            K+FWGEA+RTA  LIN SPS PL  DIP+RVWT K++S
Sbjct: 608  KTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMS 645


>gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 728

 Score =  405 bits (1041), Expect = e-131
 Identities = 203/452 (44%), Positives = 284/452 (62%), Gaps = 1/452 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            SS+S+  V EN +R + K                     +CHYC    H +R+    K++
Sbjct: 192  SSQSEVFVTENRERSQKK-EPKGGREKSRSKSKSRYKNVECHYCHKIGHIQRNYFLWKKE 250

Query: 1175 QKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRDMFT 996
             K G   N + D+                            WI+DSGA+ H+T  ++ FT
Sbjct: 251  NK-GKKVNLVSDESM--------------------------WIVDSGATLHVTTRKEFFT 283

Query: 995  SYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKLDDA 816
            SYT G FG +++ N GV++V+G+G++ L T+ G +L+L+ V H PD+  N+IS   L+D 
Sbjct: 284  SYTFGDFGVLKIGNDGVSKVIGVGDVCLQTNMGMQLLLRRVNHAPDVHFNLISVQILEDG 343

Query: 815  GYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRLGHL 636
            GYD HFG GKWKLTKG+L+VAKG++ + L+  +A ++   VNA+D  +S  LWH++L H+
Sbjct: 344  GYDTHFGSGKWKLTKGNLVVAKGEEISKLFWTKAMVAKDNVNAMDMEAS--LWHRKLSHI 401

Query: 635  SQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDLCY- 459
            S+KGL  L +  +L  + S  L+ C  C+ GKQ RV+FK   PSRKS  L LVH D+C  
Sbjct: 402  SEKGLNCLAKNDVLQGLKSAELEKCSHCMAGKQTRVSFKKHPPSRKSELLPLVHPDVCGP 461

Query: 458  MKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVRADN 279
            +K++S  GA+YFVTFIDD SRK+W +  + KDQVL  FK F A VER++GKKLK +  DN
Sbjct: 462  LKEKSFSGALYFVTFIDDCSRKLWVYVFQRKDQVLERFKQFHALVERQSGKKLKHIHTDN 521

Query: 278  GGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSFWGE 99
            GGEY GPF+ +C+ HGI  EK+ PKTPQ NG+ ERMNRT+ E V+CMLS + LPK FWGE
Sbjct: 522  GGEYCGPFDVYCKQHGIAHEKTPPKTPQLNGLVERMNRTLLETVRCMLSDAKLPKHFWGE 581

Query: 98   AMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            A+ TAV +INL+P+  L  ++PD++W GK+ S
Sbjct: 582  ALYTAVHVINLTPTVILNSEVPDKIWFGKNAS 613


>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
          Length = 579

 Score =  396 bits (1017), Expect = e-130
 Identities = 190/359 (52%), Positives = 246/359 (68%)
 Frame = -1

Query: 1211 HYERDCRKKKRDQKNGNNENKIDDKDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGA 1032
            H +R+C K +R+      E   + KD    A DGD +IICDD C++ ACQ + W++D+  
Sbjct: 115  HIKRECXKFRREXFKRKGEEHKEXKDIAXVAFDGDAIIICDDTCVNLACQDSTWVVDTAT 174

Query: 1031 SYHITPHRDMFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIR 852
            S+HIT HRD F+SYT GSFG V M N    E+VG+G++ L T  G +LVLKDVRH+P +R
Sbjct: 175  SFHITAHRDFFSSYTNGSFGWVXMGNEAKCEIVGMGDVDLETXIGCKLVLKDVRHVPXMR 234

Query: 851  LNIISTGKLDDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSS 672
             ++IS GKLDD GY +H GEGKWK+TKGSL++ +G+K N+LY ++ RL  GE        
Sbjct: 235  FSLISVGKLDDEGYHSHLGEGKWKITKGSLVLXRGKKNNTLYKIEVRLVKGE-------- 286

Query: 671  SIELWHKRLGHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSH 492
                           GL+VL RKKLL  V    L TC  C+ GKQ RVAF  F    K +
Sbjct: 287  ---------------GLQVLARKKLLX-VKGTSLLTCTHCMSGKQSRVAFHRFPSRGKHN 330

Query: 491  PLDLVHTDLCYMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERET 312
             LDLVH ++C M++ +LGGA+Y+VTFIDD SRKVW +ALKSK QVL +FK+F   +ER+T
Sbjct: 331  ILDLVHINVCTMQNNTLGGALYYVTFIDDHSRKVWAYALKSKGQVLNVFKDFHVKIERQT 390

Query: 311  GKKLKRVRADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCML 135
            GK+LK VR +NGGEY+GPFEQ+CR HGI+LEK V KTPQ NGVAERMNRTIC+R++  +
Sbjct: 391  GKQLKFVRVNNGGEYKGPFEQYCRSHGIRLEKXVXKTPQQNGVAERMNRTICDRIRAFV 449


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score =  409 bits (1050), Expect = e-127
 Identities = 210/455 (46%), Positives = 288/455 (63%), Gaps = 4/455 (0%)
 Frame = -1

Query: 1355 SSESKALVAENDKRGRSKFRGSQNXXXXXXXXXXXXXXXKCHYCGGPNHYERDCRKKKRD 1176
            SS+S  LV E  K+G+SK RG +N                CHYC    H ++ CR+ KRD
Sbjct: 170  SSQSNVLVTE--KKGKSKSRGPKNRDRSKSKTNKFANVE-CHYCHLKGHIKKYCRQLKRD 226

Query: 1175 QKNGNNENKIDD---KDTTAAAVDGDVVIICDDACISSACQQTDWIIDSGASYHITPHRD 1005
             K G  + K +D   +D   A    D +I+ D   ++ ACQ+T W+IDSGAS H TP +D
Sbjct: 227  MKQGKVKEKKNDNGGEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKD 286

Query: 1004 MFTSYTGGSFGKVRMANHGVTEVVGIGNIILNTDTGSRLVLKDVRHIPDIRLNIISTGKL 825
             FTSYT G FG VRM N G  + +G+G+          L++K     P +   I+S   L
Sbjct: 287  FFTSYTSGDFGSVRMGNDGSAKAIGMGD--------ESLMMKG-SATPSV---IVSGSSL 334

Query: 824  DDAGYDNHFGEGKWKLTKGSLIVAKGQKQNSLYLMQARLSNGEVNAIDKSSSIELWHKRL 645
                             +GS+++AKG K +SLYLMQAR+ +  +NA+D  S+ ELWH RL
Sbjct: 335  -----------------RGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRL 377

Query: 644  GHLSQKGLEVLTRKKLLPEVTSMPLQTCVDCLIGKQHRVAFKSFSPSRKSHPLDLVHTDL 465
            GH+S+KGL +L +  LL  +    L+ C  CL GKQ RVAFK+   +RK    DLV++D+
Sbjct: 378  GHMSEKGLMILAKNNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMFDLVYSDV 437

Query: 464  C-YMKDRSLGGAIYFVTFIDDFSRKVWCFALKSKDQVLGIFKNFQASVERETGKKLKRVR 288
            C  MK ++LGG++YFVTFIDD SRK+W + LK+KDQVL +FK F A VER++G+KLK +R
Sbjct: 438  CGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIR 497

Query: 287  ADNGGEYQGPFEQHCRDHGIKLEKSVPKTPQHNGVAERMNRTICERVKCMLSHSNLPKSF 108
             DNGGEY GPF+++CR H I+ +K+ PKTPQ NG+AERMNRT+ ERV+C+LS S LP+SF
Sbjct: 498  TDNGGEYSGPFDEYCRQHDIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSF 557

Query: 107  WGEAMRTAVDLINLSPSAPLGGDIPDRVWTGKDVS 3
            W EA+ T V ++NL+P  PL  D+ DR+W+  ++S
Sbjct: 558  WDEALNTVVHVLNLTPCVPLEFDVSDRIWSNNEIS 592