BLASTX nr result

ID: Rehmannia28_contig00006818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00006818
         (427 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62391.1| hypothetical protein VITISV_039481 [Vitis vinife...    55   7e-08
ref|XP_007046354.1| Uncharacterized protein TCM_011894 [Theobrom...    55   1e-07
gb|EYU22614.1| hypothetical protein MIMGU_mgv1a021769mg, partial...    54   4e-07
emb|CBI27089.3| unnamed protein product [Vitis vinifera]               52   1e-06
gb|ABK94410.1| unknown [Populus trichocarpa] gi|118485654|gb|ABK...    52   2e-06
ref|XP_006379725.1| hypothetical protein POPTR_0008s11320g [Popu...    52   2e-06

>emb|CAN62391.1| hypothetical protein VITISV_039481 [Vitis vinifera]
           gi|147864307|emb|CAN80944.1| hypothetical protein
           VITISV_014657 [Vitis vinifera]
          Length = 62

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 29/51 (56%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
 Frame = +1

Query: 88  MASLKAEKPVGSQSQGPAKKE-------PGKGPVSKQGPSKGEQKPREPRR 219
           MASLKAEKP GSQ  GP KKE       P K P SK GP K  QK +EP++
Sbjct: 1   MASLKAEKPAGSQLFGPVKKEPAKAGDGPAKAPTSKSGPKKPAQKSQEPKK 51


>ref|XP_007046354.1| Uncharacterized protein TCM_011894 [Theobroma cacao]
           gi|508710289|gb|EOY02186.1| Uncharacterized protein
           TCM_011894 [Theobroma cacao]
          Length = 66

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 9/53 (16%)
 Frame = +1

Query: 88  MASLKAEKPVGSQSQGP--AKKEP-------GKGPVSKQGPSKGEQKPREPRR 219
           MASLKAEKPVG+ S G   AKKEP        K P+SK  P K EQKPREP++
Sbjct: 1   MASLKAEKPVGTPSSGSGQAKKEPIKPSGSAPKAPISKPAPKKTEQKPREPKK 53


>gb|EYU22614.1| hypothetical protein MIMGU_mgv1a021769mg, partial [Erythranthe
           guttata]
          Length = 67

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 32/58 (55%), Positives = 38/58 (65%)
 Frame = +2

Query: 83  EKWHHSRQRNLSGPSHKARPRKSPAKARFPNRGLRRASRSLVSLGGRHQVLSQEGKNE 256
           ++WHHS+ RNL+     ARPRKS  KA  PNR    A RSL SLG R+   SQEG+NE
Sbjct: 16  KRWHHSKLRNLN---QLARPRKSLQKAPSPNR----AHRSLGSLGRRYPGRSQEGRNE 66


>emb|CBI27089.3| unnamed protein product [Vitis vinifera]
          Length = 64

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 9/53 (16%)
 Frame = +1

Query: 88  MASLKAEKPVGSQSQGPAKKEPGK---------GPVSKQGPSKGEQKPREPRR 219
           MASLKA+KP+ +Q  G  KKEP K          P SK GP K E KPREP++
Sbjct: 1   MASLKAQKPLTTQPAGQVKKEPAKPSGNPPNPPTPASKPGPKKAEHKPREPKK 53


>gb|ABK94410.1| unknown [Populus trichocarpa] gi|118485654|gb|ABK94677.1| unknown
           [Populus trichocarpa] gi|118486009|gb|ABK94848.1|
           unknown [Populus trichocarpa]
          Length = 64

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 8/52 (15%)
 Frame = +1

Query: 88  MASLKAEKPVGSQSQGPAKKEPG--------KGPVSKQGPSKGEQKPREPRR 219
           MASLKA KPVG++   P KKEP         K P SK  P K EQKPREP++
Sbjct: 1   MASLKAMKPVGTKPIEPVKKEPAAKPSSSAPKTPASKPAPKKVEQKPREPKK 52


>ref|XP_006379725.1| hypothetical protein POPTR_0008s11320g [Populus trichocarpa]
           gi|550332844|gb|ERP57522.1| hypothetical protein
           POPTR_0008s11320g [Populus trichocarpa]
          Length = 101

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
 Frame = -3

Query: 236 LAPDAFL----LGSRGFCSPFEGPCLETGPL--------PGSFLAGPCDWDPTGFSALSD 93
           L PDAFL    LGSRGFCS F G   + G L         GSFL G     PTGF ALSD
Sbjct: 22  LDPDAFLRTFFLGSRGFCSTFLGAGFDAGVLGALLLGLAAGSFLTGSIGLVPTGFIALSD 81

Query: 92  AIFLK 78
           AI L+
Sbjct: 82  AILLR 86


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