BLASTX nr result
ID: Rehmannia28_contig00006739
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00006739
(3031 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1590 0.0
ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1450 0.0
emb|CDP02357.1| unnamed protein product [Coffea canephora] 1386 0.0
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic... 1375 0.0
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1372 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 1372 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1372 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1351 0.0
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1330 0.0
ref|XP_015063459.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1326 0.0
ref|XP_015063457.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1326 0.0
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1321 0.0
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 1320 0.0
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1320 0.0
ref|XP_015063458.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1319 0.0
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1315 0.0
ref|XP_015880486.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1311 0.0
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1297 0.0
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c... 1297 0.0
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1297 0.0
>ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Sesamum indicum]
Length = 1032
Score = 1590 bits (4118), Expect = 0.0
Identities = 800/955 (83%), Positives = 841/955 (88%), Gaps = 3/955 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 353
M SSKTP SF F+ID RTPFHKPV ILNP++ VMWRNI KQVSSRTP KL RNS SL
Sbjct: 1 MSSSKTPISFGFKIDNSRTPFHKPVLILNPYRDCRVMWRNIVKQVSSRTPLKLCRNSESL 60
Query: 354 SRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL---FRNQ 524
SRTCSFLG Q+S +PDK K R LFEL+S CFP LGFQK+GD S+RDE RNQ
Sbjct: 61 SRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSSRDEFSPFPARNQ 120
Query: 525 INLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQYST 704
IN +GLC KS+ QTD E NSVN S+AD+ QELL+EVRKEERRQY T
Sbjct: 121 INWNGLCFKSYASVAEAVAVS----QTDLVEENSVNVSVADEVQELLNEVRKEERRQYWT 176
Query: 705 QWRNRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYMKSL 884
+WR RR++RG+GNE+YK LRRRQVKIETEAW QAA+EYRELLNDMCEQKLAPNLPYMKSL
Sbjct: 177 RWRQRRSVRGMGNERYKALRRRQVKIETEAWGQAAKEYRELLNDMCEQKLAPNLPYMKSL 236
Query: 885 FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGEHGY 1064
FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFD LPADMMAVITMHKLM LLM GGEHG
Sbjct: 237 FLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGEHGC 296
Query: 1065 ARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQEKLRQRVTTL 1244
ARVVQAAC+IGDAIEQEVRI YFL DGN QEQEKL QRVT L
Sbjct: 297 ARVVQAACIIGDAIEQEVRIQYFLEKTKKKKVQKNTEKEGEEFDGNNQEQEKLHQRVTML 356
Query: 1245 MKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGPPDIRP 1424
+KKQKL+AVRQ+VN+QIEYQPWGQDAKAKVGS LIELILQTAYIQPPANQ +GPPDIRP
Sbjct: 357 IKKQKLQAVRQLVNRQIEYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRP 416
Query: 1425 AFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG 1604
AFVHT RTVTK+ KTSS+RYGVIQCD LVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG
Sbjct: 417 AFVHTMRTVTKETKTSSKRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKG 476
Query: 1605 AYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSIIDRIWA 1784
AY+YLPSYVMRTHGARQQRESVKRAP +QL+PVFEALDTLGSTRWRVNKRVLSIIDRIWA
Sbjct: 477 AYLYLPSYVMRTHGARQQRESVKRAPTEQLKPVFEALDTLGSTRWRVNKRVLSIIDRIWA 536
Query: 1785 SGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELKLAVAR 1964
SGG LGDLVDR+DIPLPE+PDTEDEALL ENSERHS RCDTELKLAVAR
Sbjct: 537 SGGCLGDLVDRSDIPLPERPDTEDEALLKKWKWKVKSIKKENSERHSIRCDTELKLAVAR 596
Query: 1965 KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWLKIHLA 2144
KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGL WLKIHLA
Sbjct: 597 KMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLRWLKIHLA 656
Query: 2145 NLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACINLAEAM 2324
NLFANGVDKL HEGR+AFTENHLDDI DSADRPLEGKRWWLNAEDPFQCLAACINLAEA+
Sbjct: 657 NLFANGVDKLSHEGRLAFTENHLDDIIDSADRPLEGKRWWLNAEDPFQCLAACINLAEAL 716
Query: 2325 RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLD 2504
RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL
Sbjct: 717 RSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLK 776
Query: 2505 IMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDA 2684
IMK+DAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A
Sbjct: 777 IMKDDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 836
Query: 2685 IGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTPLGLPV 2864
I DDAE+FGAACYAAK+TLTALGQMFEAARSIM+WLG+CAK+IA ENEPV WTTPLGLPV
Sbjct: 837 IADDAELFGAACYAAKITLTALGQMFEAARSIMTWLGECAKIIASENEPVCWTTPLGLPV 896
Query: 2865 VQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
VQPYRKVGRHLIKTSLQVLTLQ ES+KVMVKRQRTAFPPNFVHSLDGSHMMMTAI
Sbjct: 897 VQPYRKVGRHLIKTSLQVLTLQRESEKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 951
>ref|XP_012835044.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Erythranthe guttata]
gi|604335441|gb|EYU39350.1| hypothetical protein
MIMGU_mgv1a000681mg [Erythranthe guttata]
Length = 1021
Score = 1450 bits (3753), Expect = 0.0
Identities = 750/967 (77%), Positives = 811/967 (83%), Gaps = 15/967 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 353
M SSKTP S +F+I R P H P N SSTVMW++IAK++SS+T NS
Sbjct: 1 MYSSKTPISTTFKIGGSRNPNHNPRSSSN---SSTVMWKSIAKRISSKTLLNRCPNSRR- 56
Query: 354 SRTCSFLGFGQDSVYPDKCKSRS-LFE-LHSSSNVCFPILGFQKIGDISTRDELLF---R 518
FL F QDSV+PDK K R LF+ S SN+ ST DE + R
Sbjct: 57 -----FLAFAQDSVFPDKFKLRKPLFDNSRSDSNIY-----------TSTHDEFMMFSSR 100
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSS---------IADDFQELLSE 671
NQ+N++GL KS+ TD E+ N+ NS+ + D+FQELL+E
Sbjct: 101 NQMNVTGLSFKSYATVAEAVEVAGS--HTDFEDDNNSNSNNNNINNSNNVDDEFQELLNE 158
Query: 672 VRKEERRQYSTQWR-NRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 848
VRKEE+RQ WR NRR+ +G+GNEK+K LRRRQVKIETEAWEQAA+EYRELLNDMCEQ
Sbjct: 159 VRKEEKRQ----WRQNRRSGKGMGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQ 214
Query: 849 KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1028
KLAPNLPYMKSLFLGWFEPLRNKI EEQEFIRKGKSKA+YA YFD LPADMMAVITMHKL
Sbjct: 215 KLAPNLPYMKSLFLGWFEPLRNKIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKL 274
Query: 1029 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1208
MALLM G EHG ARVV AACVIGDAIEQEVRIHYFL D NIQ
Sbjct: 275 MALLMTG-EHGCARVVAAACVIGDAIEQEVRIHYFLEKTKKKKVTKDAETEGDKPDENIQ 333
Query: 1209 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1388
EQ KLR++VT LMKKQKLRAVRQIVN+QIE Q WGQDAKAKVGSRLIELI+QTAYIQPPA
Sbjct: 334 EQAKLREKVTNLMKKQKLRAVRQIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPA 393
Query: 1389 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1568
+Q A+GPPDI+PAF+HTF+TV K+IK++SRRYGVIQCD LVRKGLERTARHMVIPYMPML
Sbjct: 394 SQSAEGPPDIKPAFLHTFKTVAKEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPML 453
Query: 1569 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1748
VPPVKWTGYDKGAY+YLPSYVMRTHGARQQR++VKRAPR+QL+PVFEALDTLGST+WRVN
Sbjct: 454 VPPVKWTGYDKGAYLYLPSYVMRTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVN 513
Query: 1749 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1928
KRVLSIIDRIWASGG LGDLVDR+DI LPEQPDTEDE+LL ENSERHSQ
Sbjct: 514 KRVLSIIDRIWASGGRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQ 573
Query: 1929 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2108
RCDTELKLAVARKMKEEEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRGILEFSEG+PLG
Sbjct: 574 RCDTELKLAVARKMKEEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLG 633
Query: 2109 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2288
KSGL WLKIH+ANLFANGVDKL HEGRI F ENHLDD+FDSADRPLEGKRWWLNAEDPFQ
Sbjct: 634 KSGLRWLKIHVANLFANGVDKLSHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQ 693
Query: 2289 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2468
CLAACINL EA+R+PSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA
Sbjct: 694 CLAACINLVEALRNPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 753
Query: 2469 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2648
DVYSGIA RVLDIMKEDAQKDP+V PDAL ARLLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 754 DVYSGIAARVLDIMKEDAQKDPSVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGAR 813
Query: 2649 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2828
DQIKRRLKERDA GD+ +IFGAACYAAK+TLTALGQMFEAARSIM+WLGDCAK+IA ENE
Sbjct: 814 DQIKRRLKERDAFGDETQIFGAACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENE 873
Query: 2829 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3008
PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPPNFVHSLDGS
Sbjct: 874 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 933
Query: 3009 HMMMTAI 3029
HMMMTAI
Sbjct: 934 HMMMTAI 940
>emb|CDP02357.1| unnamed protein product [Coffea canephora]
Length = 1040
Score = 1386 bits (3587), Expect = 0.0
Identities = 709/967 (73%), Positives = 795/967 (82%), Gaps = 15/967 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALR-TPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTP-----SKL 332
M S+K+P S + I L P +KP + +L P + STVMW+NIAK VSSRT +
Sbjct: 1 MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60
Query: 333 FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 512
F N HSL RT SFLGF QDS++P+K K +L + + S F GF+K+G+ STRDE L
Sbjct: 61 F-NPHSLPRTYSFLGFSQDSIFPEKFKFSTL-DFNPCSGNGFLEQGFRKVGEFSTRDEFL 118
Query: 513 FR-------NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 671
R NQI+++GL KS+ TD EE SV + AD+ ELLSE
Sbjct: 119 ARPSLNFARNQISINGLSQKSYASLAEAIAVS----STDVEEDTSVVA--ADEVHELLSE 172
Query: 672 VRKEERRQYSTQWR-NRRNIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 848
++KE+RRQ S +WR + R + G+G++KY L+RRQVKIETEAWEQAA EY+ELLNDMCE
Sbjct: 173 MKKEDRRQMSFRWRKHHRAVYGMGSKKYHALKRRQVKIETEAWEQAANEYKELLNDMCEH 232
Query: 849 KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1028
KLAPNLPYMKSLFLGWFEPL +KIAEEQE R KSKAAYAKYF LPADMM+VITMHKL
Sbjct: 233 KLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRLRKSKAAYAKYFHQLPADMMSVITMHKL 292
Query: 1029 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1208
M LLM GGEHG ARVV AAC+IGDAIEQE+RIH FL + IQ
Sbjct: 293 MGLLMTGGEHGSARVVPAACLIGDAIEQEIRIHKFLEKTKKKKVNEEMKMEGDMTTSVIQ 352
Query: 1209 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1388
EQEKLR+ VT LMKKQKL V+QIV Q + +PW + KAKVGSRLIEL+LQTAYIQ PA
Sbjct: 353 EQEKLRRTVTNLMKKQKLHVVQQIVKGQDDSKPWSTEVKAKVGSRLIELLLQTAYIQSPA 412
Query: 1389 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1568
+QLAD PPDIRPAF+HTFRTVT + K+ SRRYG+IQCD LV KGLERTARHMVIPYMPML
Sbjct: 413 DQLADCPPDIRPAFIHTFRTVTNNTKSPSRRYGIIQCDPLVLKGLERTARHMVIPYMPML 472
Query: 1569 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1748
VPPVKWTGYDKG +++LPSYVMRTHGARQQRE+VKRAP QLRPV+EALDTLG+T+WRVN
Sbjct: 473 VPPVKWTGYDKGGHLFLPSYVMRTHGARQQREAVKRAPINQLRPVYEALDTLGNTKWRVN 532
Query: 1749 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1928
KRVLS++DRIWASGG LG+LVDRNDI LPE+P+TEDEA+L ENSERHSQ
Sbjct: 533 KRVLSVVDRIWASGGRLGNLVDRNDIALPEEPETEDEAILRKWKWKVKSIKKENSERHSQ 592
Query: 1929 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2108
RCD ELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHPHLNHLGSD+CRG+LEF+EGRPLG
Sbjct: 593 RCDIELKLAVARRMKDEGGFFYPHNLDFRGRAYPMHPHLNHLGSDVCRGMLEFAEGRPLG 652
Query: 2109 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2288
KSGL WLKIHLANLFANGVDKL HE RIAFTENHL+DIFDSADRPLEG+RWWLNAEDPFQ
Sbjct: 653 KSGLHWLKIHLANLFANGVDKLSHEARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQ 712
Query: 2289 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2468
CLA CINL+EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRDKLGA+AVNLVAGEKPA
Sbjct: 713 CLAVCINLSEALRSQSPETTISHIPVHQDGSCNGLQHYAALGRDKLGASAVNLVAGEKPA 772
Query: 2469 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2648
DVYSGIA RVLDIMK DAQKDPAVFPDALRAR+L+NQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 773 DVYSGIAARVLDIMKRDAQKDPAVFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGAR 832
Query: 2649 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2828
DQIKRRLKER AI DDAE+FGAACYAAKVTLTAL +MFEAARSIMSWLG+CAK+IA EN+
Sbjct: 833 DQIKRRLKERGAIADDAELFGAACYAAKVTLTALEEMFEAARSIMSWLGECAKVIASENQ 892
Query: 2829 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3008
VRW TPLGLPVVQPYR++GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLDGS
Sbjct: 893 TVRWMTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGS 952
Query: 3009 HMMMTAI 3029
HMMMTA+
Sbjct: 953 HMMMTAV 959
>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
sylvestris] gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor [Nicotiana sylvestris]
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1375 bits (3559), Expect = 0.0
Identities = 695/960 (72%), Positives = 797/960 (83%), Gaps = 8/960 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M S+KTP S + +++ KP + +NP+ +S +MWRNI KQ+SSRTP KL +S +
Sbjct: 1 MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
RT SFLGFGQDS++ D K RSL + S SN+ ++GFQ +G+ DE L R
Sbjct: 58 --RTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLIK 111
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 698
NQ+N + C KS+ TDAEE + S+ D+ ELL+E++KEE++Q+
Sbjct: 112 NQVNNNFCCRKSYASVAEAVAVS----STDAEE----DVSVVDEVHELLTELKKEEKKQF 163
Query: 699 STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 875
+ + R +R + G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 164 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
Query: 876 KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1055
KSLFLGWFEPLR+KIAEEQE +GKSKAAYAKYF LPADMMAVITMHKLM LLM GG+
Sbjct: 224 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283
Query: 1056 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1229
HG ARVVQAA VIGDAIEQEVRIH FL DG QEQEKLR+
Sbjct: 284 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 339
Query: 1230 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1409
+VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA P
Sbjct: 340 KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDP 399
Query: 1410 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1589
PDIRPAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 400 PDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 459
Query: 1590 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1769
GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLG+T+WR+NKRVLS++
Sbjct: 460 GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVV 519
Query: 1770 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1949
DRIWA GG L DLVDR+D PLPE+PDTEDEAL EN ERHSQRCD ELK
Sbjct: 520 DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 579
Query: 1950 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2129
LAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 580 LAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 639
Query: 2130 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2309
KIHLANLFA GV+KL EGRI FTENH+DDIFDS+D+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 640 KIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCIN 699
Query: 2310 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2489
L+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA
Sbjct: 700 LSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 759
Query: 2490 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2669
RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 760 ARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 819
Query: 2670 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2849
KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 820 KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 879
Query: 2850 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 880 LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939
>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 1021
Score = 1372 bits (3551), Expect = 0.0
Identities = 697/960 (72%), Positives = 795/960 (82%), Gaps = 8/960 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M S+KTP S + +++ KP + +N + +S +MWRNI KQ+SSRTP KL +S +
Sbjct: 1 MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
RT SFLGFGQDSV+ D K RSL + S SN+ ++GFQ +G+ DE L R
Sbjct: 58 --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLLK 111
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 698
+Q+N + C + TDAEE + S+ D+ QELL+E++KEE++Q+
Sbjct: 112 SQVNSNDFCCRK---SYASVAEAVAVSSTDAEE----DVSVVDEVQELLTELKKEEKKQF 164
Query: 699 STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 875
+ + R +R + G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 165 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 224
Query: 876 KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1055
KSLFLGWFEPLR+KIAEEQE +GKSKAAYAKY LPADMMAVITMHKLM LLM GG+
Sbjct: 225 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD 284
Query: 1056 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1229
HG ARVVQAA VIGDAIEQEVRIH FL DG QEQEKLR+
Sbjct: 285 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 340
Query: 1230 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1409
+VT LMKKQKLRAV QIV +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA P
Sbjct: 341 KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDP 400
Query: 1410 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1589
PDIRPAF+H+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 401 PDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 460
Query: 1590 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1769
GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+NKRVLS++
Sbjct: 461 GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVV 520
Query: 1770 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1949
DRIWA GG L DLVDR+D PLPE+PDTEDEAL EN ERHSQRCD ELK
Sbjct: 521 DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 580
Query: 1950 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2129
LAVARKMK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 581 LAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 640
Query: 2130 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2309
KIHLANLFA GV+KL EGRIAFTENH+DDIFDSAD+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 641 KIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIN 700
Query: 2310 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2489
L+EA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA
Sbjct: 701 LSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIA 760
Query: 2490 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2669
RVLDIMK DAQ+DPA FPDA+RAR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 761 ARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 820
Query: 2670 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2849
KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 821 KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 880
Query: 2850 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 881 LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 940
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1372 bits (3550), Expect = 0.0
Identities = 693/960 (72%), Positives = 796/960 (82%), Gaps = 8/960 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M S+KTP S + +++ KP + +NP+ +S +MWRNI KQ+SSRTP KL +S +
Sbjct: 1 MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
RT SFLGFGQDS++ D K RSL + S SN+ ++GFQ +G+ DE L R
Sbjct: 58 --RTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLIK 111
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 698
NQ+N + C KS+ TDAEE + S+ D+ ELL+E++KEE++Q+
Sbjct: 112 NQVNNNFCCRKSYASVAEAVAVS----STDAEE----DVSVVDEVHELLTELKKEEKKQF 163
Query: 699 STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 875
+ + R +R + G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 164 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
Query: 876 KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1055
KSLFLGWFEPLR+KIAEEQE +GKSKAAYAKYF LPADMMAVITMHKLM LLM GG+
Sbjct: 224 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283
Query: 1056 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1229
HG ARVVQAA VIGDAIEQEVRIH FL DG QEQEKLR+
Sbjct: 284 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 339
Query: 1230 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1409
+VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L+LQTAYIQPPANQLA P
Sbjct: 340 KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDP 399
Query: 1410 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1589
PDI PAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 400 PDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 459
Query: 1590 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1769
GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLG+T+WR+NKRVLS++
Sbjct: 460 GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVV 519
Query: 1770 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1949
DRIWA GG L DLVDR+D PLPE+PDTEDEALL EN ERHSQRCD ELK
Sbjct: 520 DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELK 579
Query: 1950 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2129
LAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+EGRPLG+SGL WL
Sbjct: 580 LAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWL 639
Query: 2130 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2309
KIHLANLFA GV+KL EGRI FTENH+DDIFDS+D+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 640 KIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCIN 699
Query: 2310 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2489
L+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIA
Sbjct: 700 LSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIA 759
Query: 2490 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2669
RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 760 ARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 819
Query: 2670 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2849
KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 820 KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 879
Query: 2850 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 880 LGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
[Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
mitochondrial and chloroplast RNA polymerase [Nicotiana
tabacum]
Length = 1021
Score = 1372 bits (3550), Expect = 0.0
Identities = 698/960 (72%), Positives = 794/960 (82%), Gaps = 8/960 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M S+KTP S + +++ KP + +N + +S +MWRNI KQ+SSRTP KL +S +
Sbjct: 1 MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
RT SFLGFGQDSV+ D K RSL + S SN+ ++GFQ +G+ DE L R
Sbjct: 58 --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGEYLPGDEFLSRPLLK 111
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 698
NQ+N + C + TDAEE + S+ D+ QELL+E++KEE++Q+
Sbjct: 112 NQVNSNDFCCRK---SYASVAEAVAVSSTDAEE----DVSVVDEVQELLTELKKEEKKQF 164
Query: 699 STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 875
+ + R +R + G+G+ KY+TL+RRQVK+ETEAWEQAA+EY+ELL DMCEQKLAPNLPY+
Sbjct: 165 AFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 224
Query: 876 KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1055
KSLFLGWFEPLR+KIAEEQE +GKSKAAYAKY LPADMMAVITMHKLM LLM GG+
Sbjct: 225 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD 284
Query: 1056 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1229
HG ARVVQAA VIGDAIEQEVRIH FL DG QEQEKLR+
Sbjct: 285 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK----EDGEHVTQEQEKLRK 340
Query: 1230 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1409
+VT LMKKQKLRAV QIV +Q + +PWGQDAKAKVGSRLIEL+LQTAYIQPPANQLA P
Sbjct: 341 KVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDP 400
Query: 1410 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1589
PDIRPAF+H+ RTV K+ K++SRRYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 401 PDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 460
Query: 1590 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1769
GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+NKRVLS+I
Sbjct: 461 GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVI 520
Query: 1770 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1949
DRIWA GG L DLVDR+D PLPE+PDTEDEAL EN ERHSQRCD ELK
Sbjct: 521 DRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELK 580
Query: 1950 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2129
LAVARKMK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+L F+EGRPLG+SGL WL
Sbjct: 581 LAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWL 640
Query: 2130 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2309
KIHLANLFA GV+KL EGRIAFTENH+DDIFDSAD+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 641 KIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIN 700
Query: 2310 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2489
L+EA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA
Sbjct: 701 LSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIA 760
Query: 2490 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2669
RVLDIMK DAQ+DPA FPDA+RAR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 761 ARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 820
Query: 2670 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2849
KER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRWTTP
Sbjct: 821 KERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTP 880
Query: 2850 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
LGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 881 LGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 940
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|731418092|ref|XP_010660553.1|
PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 1351 bits (3496), Expect = 0.0
Identities = 688/966 (71%), Positives = 781/966 (80%), Gaps = 14/966 (1%)
Frame = +3
Query: 174 MCSSKTPF---SFSFEIDALRTPFHKPVDIL-NPHKSSTVMWRNIAKQVSSRTPSK-LFR 338
M S KTP + ++D + + F KP + NP K TVMWRNIAK+ R P K ++
Sbjct: 1 MSSGKTPILSANLGRDLDLIIS-FEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYL 59
Query: 339 NSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL-- 512
+S LSR SFLGF QD ++P+ K + FE S S+ F +GF++IG+IS+R++ +
Sbjct: 60 DSQPLSRRYSFLGFSQDLIFPEIMKFGT-FEPSSCSSSGFSEMGFRRIGEISSREDAVGR 118
Query: 513 -----FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVR 677
RNQ+ SG CPKS+ TD EE + S +D+ QELL E++
Sbjct: 119 PSFGCLRNQMGFSGFCPKSYASVAEAVS------STDVEE----DVSASDEIQELLGEMK 168
Query: 678 KEERRQYSTQWRNRRNI-RGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKL 854
KEE+RQ + + R + + RG+ +Y LRRRQVKIETEAWE AA+EY+ELL DMCEQKL
Sbjct: 169 KEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKL 228
Query: 855 APNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMA 1034
APNLPYMKSLFLGWFEPLR+ I +EQE R GK+KAAYA YFD LPADMM+VITMHKL+
Sbjct: 229 APNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVG 288
Query: 1035 LLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQ 1214
LLM GGEHG RVVQAACVIGDAIEQEVRIH FL D I EQ
Sbjct: 289 LLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQ 348
Query: 1215 EKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA-N 1391
EKLR++VT LMKKQKL A RQIV +PWG +AKAKVGSRLIEL++QTAYIQPP N
Sbjct: 349 EKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDN 408
Query: 1392 QLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLV 1571
QLAD PPDIRPAFVHTF+TV ++ K RR+GVI+CD LV+KGLERTARHMVIPY+PMLV
Sbjct: 409 QLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLV 468
Query: 1572 PPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNK 1751
PP+KWTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR QL PVFEAL+TLG+T+WR+NK
Sbjct: 469 PPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINK 528
Query: 1752 RVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQR 1931
R+ ++DRIWA GG L DLVDRND+PLPE+PDTEDEA L NSERHSQR
Sbjct: 529 RLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQR 588
Query: 1932 CDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGK 2111
CD ELKLAVARKMK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLG
Sbjct: 589 CDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGS 648
Query: 2112 SGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQC 2291
SGL WLKIHLANLFA GVDKL HEGRI FTENHLDDIFDSADRPLEGKRWWLNAEDPFQ
Sbjct: 649 SGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQF 708
Query: 2292 LAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAD 2471
LAACINL+EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPAD
Sbjct: 709 LAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPAD 768
Query: 2472 VYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARD 2651
VYSGIA RVLDIMK DA+KDPA+FPDALRAR+LINQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 769 VYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARD 828
Query: 2652 QIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEP 2831
QIKRRLKER+AI DD E+FGAACYAAK+TLTALG+MF+AARSIMSWLGDCAK+IA EN+P
Sbjct: 829 QIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQP 888
Query: 2832 VRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSH 3011
VRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E++ +MVKRQRTAFPPNFVHSLDGSH
Sbjct: 889 VRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSH 948
Query: 3012 MMMTAI 3029
MMMTAI
Sbjct: 949 MMMTAI 954
>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Solanum tuberosum]
Length = 1019
Score = 1330 bits (3441), Expect = 0.0
Identities = 681/960 (70%), Positives = 779/960 (81%), Gaps = 8/960 (0%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M +KTP S + + F++ ++ NP+++S +MWRNI KQ SSRTP K+ S +
Sbjct: 1 MSCTKTPISLTIK-------FNQFTNLETNPYQNSPIMWRNIVKQFSSRTPQKILLTSKN 53
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDIST--RDELL--FR 518
RT SFLGFGQDSV+ DK RS + S SN F +GFQ +G+ R LL +
Sbjct: 54 --RTYSFLGFGQDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFDEFLRRPLLCAMK 110
Query: 519 NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEERRQY 698
+Q++ + +C KS+ TDAEE + S+ + QELL+E++KEE++Q+
Sbjct: 111 SQVSNNDICRKSYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEKKQF 162
Query: 699 STQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNLPYM 875
+ + RN+R + G+ KY L+RRQVKIET+AWE AA+EYRELL DMCEQKLAPNLPY+
Sbjct: 163 TFRRRNQRLLTSGIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYV 222
Query: 876 KSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMIGGE 1055
KSLFLGWFEPLR+KIA+EQE +GKSKAAY+KYF LPADMMAVITMHKLM LLM GGE
Sbjct: 223 KSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGE 282
Query: 1056 HGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEKLRQ 1229
HG ARVVQAA IGDAIEQEVRIH FL DG EQ+KL +
Sbjct: 283 HGNARVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRKM----EDGEHATLEQKKLHK 338
Query: 1230 RVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLADGP 1409
+VT+LMKKQKLRAV QIV Q + +PWGQDAKAKVGSRLIE +LQTAYIQ PA+QLA P
Sbjct: 339 KVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDP 398
Query: 1410 PDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPVKWT 1589
PDIRPAF+H+ RTV K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPMLVPPVKWT
Sbjct: 399 PDIRPAFIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWT 458
Query: 1590 GYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVLSII 1769
GYDKG ++YLPSYVMRTHGARQQRE+VKRA R QLRPVFEALDTLGST+WR+NKRVLS++
Sbjct: 459 GYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVV 518
Query: 1770 DRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDTELK 1949
DRIWA GG L DLVDR+D PLPE+PDTEDEA+ EN ERHSQRCD ELK
Sbjct: 519 DRIWAGGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELK 578
Query: 1950 LAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLCWL 2129
LAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLG+SGL WL
Sbjct: 579 LAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWL 638
Query: 2130 KIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAACIN 2309
KIHLANLFA GVDKL +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPFQCLA CIN
Sbjct: 639 KIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCIN 698
Query: 2310 LAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 2489
L+EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA
Sbjct: 699 LSEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 758
Query: 2490 TRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2669
RVLDIM DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 759 ARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 818
Query: 2670 KERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRWTTP 2849
KER AI DD+E+FGAA YAAKVTLTALG+MFEAARSIM+WL +CAK+IA ENEPVRWTTP
Sbjct: 819 KERGAIADDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTP 878
Query: 2850 LGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAI 3029
LGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 879 LGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 938
>ref|XP_015063459.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
isoform X3 [Solanum pennellii]
Length = 967
Score = 1326 bits (3432), Expect = 0.0
Identities = 676/968 (69%), Positives = 775/968 (80%), Gaps = 16/968 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDA-LRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M +KTP S + + + L T NP+ +S +MWRNI KQ S+RTP K+ S +
Sbjct: 1 MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
S+LGFG DSV+ DK RS + S SN F +GFQ +G+ DE L R
Sbjct: 52 --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108
Query: 519 ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 689
+Q++ + +C K++ TDAEE + S+ + QELL+E++KEE+
Sbjct: 109 AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160
Query: 690 RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 866
+Q++ + R +R + G+ KY L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161 KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220
Query: 867 PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1046
PY+KSLFLGWFEPLRNKIA+EQE +GKSKAAY+KYF LPADMMAVITMHKLM LLM
Sbjct: 221 PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280
Query: 1047 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1208
GGEHG RVVQAA IGDAIEQEVRIH FL D NI+
Sbjct: 281 GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331
Query: 1209 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1385
EQ+KL ++VT+LMKKQKLRAV QIV Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332 LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391
Query: 1386 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1565
A+QLA PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392 ADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPM 451
Query: 1566 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1745
LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 452 LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 511
Query: 1746 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1925
NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+ EN ERHS
Sbjct: 512 NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 571
Query: 1926 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2105
QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 572 QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 631
Query: 2106 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2285
G+SGL WLKIHLANLFA GVDKL +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 632 GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 691
Query: 2286 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2465
QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 692 QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 751
Query: 2466 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2645
ADVYSGIA RVLDIM DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 752 ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 811
Query: 2646 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2825
RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 812 RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 871
Query: 2826 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3005
EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 872 EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 931
Query: 3006 SHMMMTAI 3029
SHMMMTA+
Sbjct: 932 SHMMMTAV 939
>ref|XP_015063457.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 1020
Score = 1326 bits (3432), Expect = 0.0
Identities = 676/968 (69%), Positives = 775/968 (80%), Gaps = 16/968 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDA-LRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M +KTP S + + + L T NP+ +S +MWRNI KQ S+RTP K+ S +
Sbjct: 1 MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
S+LGFG DSV+ DK RS + S SN F +GFQ +G+ DE L R
Sbjct: 52 --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108
Query: 519 ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 689
+Q++ + +C K++ TDAEE + S+ + QELL+E++KEE+
Sbjct: 109 AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160
Query: 690 RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 866
+Q++ + R +R + G+ KY L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161 KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220
Query: 867 PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1046
PY+KSLFLGWFEPLRNKIA+EQE +GKSKAAY+KYF LPADMMAVITMHKLM LLM
Sbjct: 221 PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280
Query: 1047 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1208
GGEHG RVVQAA IGDAIEQEVRIH FL D NI+
Sbjct: 281 GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331
Query: 1209 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1385
EQ+KL ++VT+LMKKQKLRAV QIV Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332 LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391
Query: 1386 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1565
A+QLA PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392 ADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPM 451
Query: 1566 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1745
LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 452 LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 511
Query: 1746 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1925
NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+ EN ERHS
Sbjct: 512 NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 571
Query: 1926 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2105
QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 572 QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 631
Query: 2106 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2285
G+SGL WLKIHLANLFA GVDKL +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 632 GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 691
Query: 2286 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2465
QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 692 QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 751
Query: 2466 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2645
ADVYSGIA RVLDIM DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 752 ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 811
Query: 2646 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2825
RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 812 RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 871
Query: 2826 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3005
EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 872 EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 931
Query: 3006 SHMMMTAI 3029
SHMMMTA+
Sbjct: 932 SHMMMTAV 939
>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Nelumbo nucifera]
Length = 1031
Score = 1321 bits (3420), Expect = 0.0
Identities = 677/965 (70%), Positives = 777/965 (80%), Gaps = 12/965 (1%)
Frame = +3
Query: 171 LMCSSKTPFSFSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
L+ S+ F + I + F P N + ST MWR+IA++ +S T +L R+S S
Sbjct: 7 LISSTNLSNKFVYLIQVDKATFCPP----NSSRISTAMWRHIARR-ASLTKVRLSRDSSS 61
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL------ 512
+ RT F+GF QDS+ D + FEL SS + F F + G++ ++++ L
Sbjct: 62 ILRTFGFMGFSQDSILNDTTRP---FELKSSMSFRFSERSFLRNGELPSKEDELGRPILG 118
Query: 513 -FRNQINLSGLC--PKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKE 683
FRN I+ L PK + DAEE + S D+ QELL E+ KE
Sbjct: 119 CFRNPISPPRLSNHPKGYASVAEAVC------SMDAEE----DLSAIDEIQELLEEMGKE 168
Query: 684 ERRQYSTQWRNRRNIR---GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKL 854
E+++ + R+++ I+ G+G KY LRRRQVKIETEAWEQAA+EYRELL DMCEQKL
Sbjct: 169 EKKEL--ELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYRELLMDMCEQKL 226
Query: 855 APNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMA 1034
APNLPYMKSLFLGWFEPLR+ I EQE RKGK++ AYA YFD LPA+MM+VITMHKLM
Sbjct: 227 APNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMSVITMHKLMG 286
Query: 1035 LLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQ 1214
LLM GGEHG RVVQAAC IG+AIE EVRIH FL SD I+EQ
Sbjct: 287 LLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTDKDKKADGGE-SDPVIKEQ 345
Query: 1215 EKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQ 1394
++LR++VT LMKKQKL+ VRQIV Q + +PWGQDA+AKVGSRLIEL++QTAYIQPP +Q
Sbjct: 346 QRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTAYIQPPVDQ 405
Query: 1395 LADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVP 1574
LADGPPDIRPAF H+ +TVTK+ + +SRRYGVI+CD LVRKGLERTARHMVIPYMPMLVP
Sbjct: 406 LADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTARHMVIPYMPMLVP 465
Query: 1575 PVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKR 1754
PV WTGYDKGAY++LPSYVMRTHGARQQRE+VKRAPRKQL PVFEALDTLG+T+WRVNKR
Sbjct: 466 PVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGNTKWRVNKR 525
Query: 1755 VLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRC 1934
VLS++DRIWASGG L DLVDR D+P+PE+PDTEDEA + ENSERHSQRC
Sbjct: 526 VLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKKENSERHSQRC 585
Query: 1935 DTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKS 2114
D ELKLAVAR+MK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKS
Sbjct: 586 DIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKS 645
Query: 2115 GLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCL 2294
GL WLKIHLANL+A GVDKL +EGRIAFTENHLDDIFDSADRPLEG+RWWLNAEDPFQCL
Sbjct: 646 GLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNAEDPFQCL 705
Query: 2295 AACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADV 2474
AACINL+EA+RS SPETTISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADV
Sbjct: 706 AACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADV 765
Query: 2475 YSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQ 2654
YSGIA RVLDIM+ DA+KDP P+A+ AR+LINQVDRKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 766 YSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSVYGVTYIGARDQ 825
Query: 2655 IKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPV 2834
IKRRLKER+ I DD+E+FGA+CYAAK TLTALG+MFEAARSIMSWLGDCAK+IA EN+PV
Sbjct: 826 IKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKIIASENQPV 885
Query: 2835 RWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHM 3014
RWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPPNFVHSLDGSHM
Sbjct: 886 RWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHM 945
Query: 3015 MMTAI 3029
MMTA+
Sbjct: 946 MMTAV 950
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 1320 bits (3417), Expect = 0.0
Identities = 677/967 (70%), Positives = 760/967 (78%), Gaps = 15/967 (1%)
Frame = +3
Query: 174 MCSSKTPFS-------FSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKL 332
M S+TP S F+F + FHK NP ST +WRN AKQ SR +
Sbjct: 1 MSRSQTPLSPANISKNFTFHSPLI---FHK-----NPSMISTTVWRNFAKQAISRK-QRF 51
Query: 333 FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 512
NS S SR S LG Q+SV+P K FEL S S++ F +GF+ G IS+ ++ +
Sbjct: 52 HINSQSFSRAYSLLGICQESVFPGNFKP---FELSSCSSLRFSEVGFRGKGAISSPEDCM 108
Query: 513 -------FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 671
RN I +G CPK + TD EE S+ D+ QELL +
Sbjct: 109 CKPSFWSVRNPIWFNGFCPKGYASVAEAVS------STDVEE----EVSVVDEVQELLQQ 158
Query: 672 VRKEERRQYSTQWRNRRN-IRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 848
+ EE+R+ + R R+N RG+G KY L+RRQ+KIETEAWE+AA+EYREL+ DMCEQ
Sbjct: 159 MSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQ 218
Query: 849 KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1028
KLAPNLPYMKSLFLGWFEPLRN I +EQ+ RKGK+K AYA Y D LPADMM+VITMHKL
Sbjct: 219 KLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKL 278
Query: 1029 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1208
M LLM GGEHG RVV AAC IG+AIEQEVRIH FL SD +
Sbjct: 279 MGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGE--SDAAKK 336
Query: 1209 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1388
E+EKL ++VT LMKKQKL+AVR IV+K + W +A+AKVGSRLIEL+ QTA+IQPPA
Sbjct: 337 EREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPA 396
Query: 1389 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1568
+QLADGPPDIRPAFVHTFRTV KD K +SRRYGVI+CD LV KGLE+TARHMVIPYMPML
Sbjct: 397 DQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPML 456
Query: 1569 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1748
VPP+ WTGYDKG Y +LPSYVMR HGARQQRE++KR PR+QL PVF+ALD LG+TRWRVN
Sbjct: 457 VPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVN 516
Query: 1749 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1928
KRVLS++DRIWASGGHL DLVDRND+PLPE+PDTEDE LL EN ERHSQ
Sbjct: 517 KRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQ 576
Query: 1929 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2108
RCDTELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLG
Sbjct: 577 RCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLG 636
Query: 2109 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2288
KSGL WLKIHLANL+A GVDKL EGRIAFTENHLDDIFDS D+PLEG+RWWL AEDPFQ
Sbjct: 637 KSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQ 696
Query: 2289 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2468
CLA CINLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPA
Sbjct: 697 CLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPA 756
Query: 2469 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2648
DVYSGIA RVL+IM+ DAQKDP VFP+ALRA+LLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 757 DVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGAR 816
Query: 2649 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2828
DQIKRRLKER +I DDAEIFG ACYAAK+TLTALG+MFEAAR IMSWLG+CAK+IA EN+
Sbjct: 817 DQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQ 876
Query: 2829 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3008
PVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLD S
Sbjct: 877 PVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSS 936
Query: 3009 HMMMTAI 3029
HMMMTAI
Sbjct: 937 HMMMTAI 943
>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Solanum lycopersicum]
Length = 1022
Score = 1320 bits (3417), Expect = 0.0
Identities = 673/963 (69%), Positives = 768/963 (79%), Gaps = 11/963 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDALRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M +KTP S + D D+ NP+ S +MWRNI KQ S+RTP K+ S +
Sbjct: 1 MSCTKTPISLTIRFDQF-------TDLETNPYHISPIMWRNIVKQFSTRTPQKILLTSKN 53
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
S+LGFG SV+ DK RS + S SN F +GFQ +G+ DE L R
Sbjct: 54 --HAYSYLGFGLHSVFKDKRTLRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 110
Query: 519 ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 689
+Q++ + +C K++ TDAEE + S+ + QELL+E++KEE+
Sbjct: 111 AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 162
Query: 690 RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 866
+Q++ + R +R + G+ KY L RRQVKIET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 163 KQFTFRRRKQRMLTSGIDRRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNL 222
Query: 867 PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1046
PY+KSLFLGWFEPLR+KIA+EQE +GKSKAAY+KYF LPADMMAVITMHKLM LLM
Sbjct: 223 PYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 282
Query: 1047 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGN--IQEQEK 1220
GGEHG RVVQAA IGDAIEQEVRIH FL DG EQ+K
Sbjct: 283 GGEHGNVRVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRNM----EDGEHATLEQKK 338
Query: 1221 LRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQLA 1400
L ++VT+LMKKQKLRAV QIV Q + +PWGQDAKAKVGSRLIE +LQTAYIQ PA+QLA
Sbjct: 339 LHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLA 398
Query: 1401 DGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPPV 1580
PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTARHMVIPYMPMLVPPV
Sbjct: 399 VDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPV 458
Query: 1581 KWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRVL 1760
KWTGYDKG ++YLPSYVMRTHGARQQRE+VKR R QL+PVFEALDTLGST+WR+NKRVL
Sbjct: 459 KWTGYDKGGHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVL 518
Query: 1761 SIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCDT 1940
S++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+ EN ERHSQRCD
Sbjct: 519 SVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDI 578
Query: 1941 ELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGL 2120
ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPLGKSGL
Sbjct: 579 ELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGL 638
Query: 2121 CWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAA 2300
WLKIHLANLFA GVDKL +GRIAFTE+HLDDIFDSAD+PLEG+ WWLNAEDPFQCLA
Sbjct: 639 RWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAV 698
Query: 2301 CINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 2480
CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS
Sbjct: 699 CINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYS 758
Query: 2481 GIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIK 2660
GIA RVLDIM DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIK
Sbjct: 759 GIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIK 818
Query: 2661 RRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVRW 2840
RRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA ENEPVRW
Sbjct: 819 RRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRW 878
Query: 2841 TTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMMM 3020
TTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDGSHMMM
Sbjct: 879 TTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMM 938
Query: 3021 TAI 3029
TA+
Sbjct: 939 TAV 941
>ref|XP_015063458.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial isoform X2 [Solanum
pennellii]
Length = 1019
Score = 1319 bits (3414), Expect = 0.0
Identities = 675/968 (69%), Positives = 773/968 (79%), Gaps = 16/968 (1%)
Frame = +3
Query: 174 MCSSKTPFSFSFEIDA-LRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 350
M +KTP S + + + L T NP+ +S +MWRNI KQ S+RTP K+ S +
Sbjct: 1 MSCTKTPISLTIKFNTDLET---------NPYHNSPIMWRNIVKQFSTRTPQKILLTSKN 51
Query: 351 LSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELLFR---- 518
S+LGFG DSV+ DK RS + S SN F +GFQ +G+ DE L R
Sbjct: 52 --HAYSYLGFGLDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGEFLPGDEFLRRPLLC 108
Query: 519 ---NQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRKEER 689
+Q++ + +C K++ TDAEE + S+ + QELL+E++KEE+
Sbjct: 109 AMKSQVSNNDICRKNYASVAEAVAVS----STDAEE----DVSVVGEVQELLTELKKEEK 160
Query: 690 RQYSTQWRNRRNIR-GVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLAPNL 866
+Q++ + R +R + G+ KY L RRQV+IET+AWEQAA+EYRELL DMCEQKLAPNL
Sbjct: 161 KQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNL 220
Query: 867 PYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMALLMI 1046
PY+KSLFLGWFEPLRNKIA+EQE +GKSKAAY+KYF LPADMMAVITMHKLM LLM
Sbjct: 221 PYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMT 280
Query: 1047 GGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ------ 1208
GGEHG RVVQAA IGDAIEQEVRIH FL D NI+
Sbjct: 281 GGEHGNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKAE---------KDRNIKDGEHAT 331
Query: 1209 -EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1385
EQ+KL ++VT+LMKKQKLRAV QIV Q + +PWGQDAKAKVGSRLIE +LQTAYIQ P
Sbjct: 332 LEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSP 391
Query: 1386 ANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPM 1565
A+QLA PPDIRPAF+H+ RT+ K+ +SRRYGVIQCD LV KGLERTARHMVIPYMPM
Sbjct: 392 ADQLAVDPPDIRPAFIHSTRTLAKETN-ASRRYGVIQCDELVFKGLERTARHMVIPYMPM 450
Query: 1566 LVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRV 1745
LVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEALDTLGST+WR+
Sbjct: 451 LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 510
Query: 1746 NKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHS 1925
NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+ EN ERHS
Sbjct: 511 NKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHS 570
Query: 1926 QRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPL 2105
QRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG+LEF+ GRPL
Sbjct: 571 QRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPL 630
Query: 2106 GKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPF 2285
G+SGL WLKIHLANLFA GVDKL +GRIAFTE+HLDDIFDSAD+PLEG+RWWLNAEDPF
Sbjct: 631 GESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPF 690
Query: 2286 QCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 2465
QCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 691 QCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 750
Query: 2466 ADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGA 2645
ADVYSGIA RVLDIM DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 751 ADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGA 810
Query: 2646 RDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMEN 2825
RDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG+CAK+IA EN
Sbjct: 811 RDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASEN 870
Query: 2826 EPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDG 3005
EPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAFPPNF+HSLDG
Sbjct: 871 EPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDG 930
Query: 3006 SHMMMTAI 3029
SHMMMTA+
Sbjct: 931 SHMMMTAV 938
>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
isoform X1 [Prunus mume]
Length = 1024
Score = 1315 bits (3402), Expect = 0.0
Identities = 673/967 (69%), Positives = 758/967 (78%), Gaps = 15/967 (1%)
Frame = +3
Query: 174 MCSSKTPFS-------FSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKL 332
M SS+TP S F+F + FHK NP ST +WRN AKQ SR +
Sbjct: 1 MSSSQTPLSPANISKNFTFHSPLI---FHK-----NPSMISTTVWRNFAKQAISRK-QRF 51
Query: 333 FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 512
NS S SR S L Q+SV+P K FEL S S++ F +GF+ G IS+ ++ +
Sbjct: 52 HINSQSFSRAYSLLRICQESVFPGNFKP---FELSSCSSLRFSEVGFRGKGTISSPEDCM 108
Query: 513 -------FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 671
RN I +G CPK + TD EE + S+ D+ QELL +
Sbjct: 109 CKPSFWSVRNPIGFNGFCPKGYASVAEAVS------STDVEE----DVSVVDEVQELLQQ 158
Query: 672 VRKEERRQYSTQWRNRRN-IRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQ 848
+ EE+R+ + R R+N RG+G KY L+RRQ+KIETEAWE+AA+EYREL+ DMCEQ
Sbjct: 159 MSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQ 218
Query: 849 KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKL 1028
KLAPNLPYMKSLFLGWFEPLRN I EQ+ RKGK KAAYA Y D LPADMM+VITMHKL
Sbjct: 219 KLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYAPYIDQLPADMMSVITMHKL 278
Query: 1029 MALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQ 1208
M LLM GGEHG RVV AAC IG+AIEQEVRIH FL SD ++
Sbjct: 279 MGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGE--SDAAMK 336
Query: 1209 EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPA 1388
E+EKL ++VT LMKKQKL+AVR IV+K + W +A+AK+GSRLIEL+ QTA+IQPPA
Sbjct: 337 EREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKIGSRLIELLTQTAFIQPPA 396
Query: 1389 NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPML 1568
+QLADGPPDIRPAFVHTFRTV KD K +SRRYGVI+CD LV KGLE+TARH++IPYMPML
Sbjct: 397 DQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHVMIPYMPML 456
Query: 1569 VPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVN 1748
VPP+ WTGYDKG Y +LPSYVMR HGARQQRE++KR PR+QL PVF+ALD LG+TRWRVN
Sbjct: 457 VPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVN 516
Query: 1749 KRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQ 1928
KRVLS++DRIWASGGHL DLVDRND+PLPE+PDTEDE LL EN ERHSQ
Sbjct: 517 KRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQ 576
Query: 1929 RCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLG 2108
RCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLG
Sbjct: 577 RCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLG 636
Query: 2109 KSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQ 2288
KSGL WLKIHLANL+A GVDKL EGRIAFTENHLDDIFDS D PLEG+RWWL AEDPFQ
Sbjct: 637 KSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDIPLEGRRWWLKAEDPFQ 696
Query: 2289 CLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 2468
CLA CINLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPA
Sbjct: 697 CLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPA 756
Query: 2469 DVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 2648
DVYSGIA RVL+IM+ DAQKDP VFP+AL A+LLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 757 DVYSGIAVRVLEIMRRDAQKDPTVFPEALHAKLLINQVDRKLVKQTVMTSVYGVTYIGAR 816
Query: 2649 DQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENE 2828
DQIKRRLKER +I DDAEIFG ACYAAK+TLTALG+MFEAAR IMSWLG+CAK+IA EN+
Sbjct: 817 DQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQ 876
Query: 2829 PVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGS 3008
PVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLD S
Sbjct: 877 PVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSS 936
Query: 3009 HMMMTAI 3029
HMMMTAI
Sbjct: 937 HMMMTAI 943
>ref|XP_015880486.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Ziziphus jujuba]
gi|1009127049|ref|XP_015880487.1| PREDICTED: DNA-directed
RNA polymerase 2B, chloroplastic/mitochondrial [Ziziphus
jujuba]
Length = 1028
Score = 1311 bits (3393), Expect = 0.0
Identities = 673/964 (69%), Positives = 768/964 (79%), Gaps = 12/964 (1%)
Frame = +3
Query: 174 MCSSKTP-FSFSFEIDALRTPFHKPVDILN--PHKSSTVMWRNIAKQVSSRTPSKLFRNS 344
M +KTP S F + ++ I+ P ST+MWRN A+Q SR + +S
Sbjct: 1 MSCAKTPSISADFSQGIYHSSQYRKPSIVRTIPSTVSTLMWRNFARQAFSRN-LRFRPDS 59
Query: 345 HSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL---- 512
HS SR CSFLG + S +K K R FEL S S+ F GF + G+IS+ D+ +
Sbjct: 60 HSFSRACSFLGKTEHS---EKLKFRP-FELSSCSSYGFSETGFCRNGEISSHDDPVSRLG 115
Query: 513 ---FRNQINLS-GLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSEVRK 680
RNQ+ + G+CPK + T+ E+ + S ++ QELL ++ K
Sbjct: 116 YGFVRNQVAGNIGICPKGYASVAEAVS------STEVED----DISAGEEIQELLQQMNK 165
Query: 681 EERRQYSTQWRNRRN-IRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCEQKLA 857
EE+++ RN + +RG+G +KY+ LRRRQVKIETEAWEQA +EY+ELL DMCEQKLA
Sbjct: 166 EEKKEILNMRRNHQKMVRGMGEKKYQVLRRRQVKIETEAWEQALKEYKELLMDMCEQKLA 225
Query: 858 PNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHKLMAL 1037
PNLPYMKSLFLGWFEPLRN IA+EQE R+GK+K AYA YFD LPA+MMAVITMHKLM L
Sbjct: 226 PNLPYMKSLFLGWFEPLRNAIAKEQELCRQGKNKPAYAPYFDQLPAEMMAVITMHKLMGL 285
Query: 1038 LMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNIQEQE 1217
LM GGEHG ARVV AAC+IGDAIEQEVRI FL D I+EQ
Sbjct: 286 LMTGGEHGTARVVPAACIIGDAIEQEVRIQRFLEKTRKKKLGKDKEDEGY-EDTMIKEQ- 343
Query: 1218 KLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPPANQL 1397
KL+++VT LMKKQKLRAVRQIV +Q + + WGQDA+AKVGSRLIEL+ +TA+IQPPA+Q
Sbjct: 344 KLKKKVTDLMKKQKLRAVRQIVKRQDDLKSWGQDARAKVGSRLIELLTETAHIQPPADQS 403
Query: 1398 ADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPYMPMLVPP 1577
ADGPPD+RPAF+HTFRTV K+ K + RRYGVI+CD LV KGL+RTARHMVIPYMPMLVPP
Sbjct: 404 ADGPPDVRPAFLHTFRTVVKNAKNTGRRYGVIECDPLVLKGLDRTARHMVIPYMPMLVPP 463
Query: 1578 VKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWRVNKRV 1757
V WTGYDKG ++YLPSYVMRTHGARQQRE+VKRAPR+QL PVFEALD LG+T+WR+NKR+
Sbjct: 464 VNWTGYDKGGHLYLPSYVMRTHGARQQREAVKRAPREQLEPVFEALDALGNTKWRINKRI 523
Query: 1758 LSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERHSQRCD 1937
LSI+DRIW S G L DLVDR+D+PLPE PDTEDE LL EN ERHSQRCD
Sbjct: 524 LSIVDRIWVSSGRLADLVDRDDVPLPEMPDTEDETLLKKWKWKVKNVKKENRERHSQRCD 583
Query: 1938 TELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSG 2117
TELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGRPLGKSG
Sbjct: 584 TELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 643
Query: 2118 LCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLA 2297
L WLKIHLANL+A GVDKL EGRIAFTENHLD+IFDSAD PLEGKRWWLNAEDPFQCLA
Sbjct: 644 LRWLKIHLANLYAGGVDKLSLEGRIAFTENHLDEIFDSADSPLEGKRWWLNAEDPFQCLA 703
Query: 2298 ACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 2477
CINL EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDK GAAAVNLVAGEKPADVY
Sbjct: 704 VCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKSGAAAVNLVAGEKPADVY 763
Query: 2478 SGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI 2657
SGIA VL IMK DA++DPA+FPDALRA++LINQVDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 764 SGIAASVLKIMKRDAERDPAIFPDALRAKVLINQVDRKLVKQTVMTSVYGVTYIGARDQI 823
Query: 2658 KRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAMENEPVR 2837
KRRLKER I DD+E+FG ACYAAK TLTALGQMFEAAR+IM+WLGDCAK+IA EN+PVR
Sbjct: 824 KRRLKERGGITDDSELFGCACYAAKTTLTALGQMFEAARNIMNWLGDCAKIIASENQPVR 883
Query: 2838 WTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLDGSHMM 3017
WTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPPNFVHSLDGSHMM
Sbjct: 884 WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMM 943
Query: 3018 MTAI 3029
MTA+
Sbjct: 944 MTAV 947
>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Nelumbo
nucifera]
Length = 942
Score = 1297 bits (3357), Expect = 0.0
Identities = 653/925 (70%), Positives = 751/925 (81%), Gaps = 9/925 (0%)
Frame = +3
Query: 282 MWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFP 461
MWRNI KQ S + R+S S+ RT +G+ Q V+ DK + FE SS N F
Sbjct: 1 MWRNIVKQACST--NFFSRDSSSMLRTFGVVGYSQYPVFHDKARQ---FEFKSSINAGFS 55
Query: 462 ILGFQKIGDISTRDELL-------FRNQINLSGLC--PKSFXXXXXXXXXXXXXXQTDAE 614
F + G+ ++++ L FRN + LS PK + TDAE
Sbjct: 56 ESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS------STDAE 109
Query: 615 EGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRNIRGVGNEKYKTLRRRQVKIETEA 794
E + S+ D+ QELL E+ KEE+ + + + + G+G KY LRRRQVKIETEA
Sbjct: 110 E----DVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEA 165
Query: 795 WEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAK 974
WEQAA+EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA EQE RKGK++AAYA
Sbjct: 166 WEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAP 225
Query: 975 YFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXX 1154
YFD LPA+MM+VITMHKL+ LLM GGEHG ARVVQAAC+IG AIE EVRI+ FL
Sbjct: 226 YFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKK 285
Query: 1155 XXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKV 1334
SD I+EQ++LR++VT LMKKQKL+ VRQIV Q + +PWGQDA+AKV
Sbjct: 286 TDKDKKAEGGE-SDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344
Query: 1335 GSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVR 1514
GS LIEL++QTAYIQ PA+QLADGPPDIRPAF HT +T+TK+ + +SRRYG+I+CD LVR
Sbjct: 345 GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404
Query: 1515 KGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQL 1694
KGLERTARHMVIPYMPMLVPP+ WTGYDKGAY++LPSYVMRTHGARQQRE+VKR RKQL
Sbjct: 405 KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464
Query: 1695 RPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXX 1874
P+FEALDTLG+T+WR+NKRVL ++DRIWASGG L DLVDR D+PLPE+P+TEDEA L
Sbjct: 465 EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524
Query: 1875 XXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHL 2054
ENSERHSQRCDTELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525 WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584
Query: 2055 GSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSA 2234
GSD+CRGILEF+EGRPLGKSGL WLKIHLANL+A GVDKL +EGRIAFTENHLDDIFDSA
Sbjct: 585 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644
Query: 2235 DRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALG 2414
DRPLEG+RWWLNA+DPFQCLA CINL+EA+RS SPET ISHIP+HQDGSCNGLQHYAALG
Sbjct: 645 DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704
Query: 2415 RDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKL 2594
RDKLGAAAVNLVAG+KPADVYSG+A RVLDIM+ DAQKDP P+A+ ARLLINQVDRKL
Sbjct: 705 RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764
Query: 2595 VKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAAR 2774
VKQTVMTSVYGVTYIGARDQIKRRLKER+AI D++E+FGA+CYAAK T+TALG+MF+AAR
Sbjct: 765 VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824
Query: 2775 SIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMV 2954
SIMSWLGDCAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMV
Sbjct: 825 SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884
Query: 2955 KRQRTAFPPNFVHSLDGSHMMMTAI 3029
KRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 885 KRQRTAFPPNFIHSLDGSHMMMTAV 909
>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Nelumbo
nucifera]
Length = 990
Score = 1297 bits (3357), Expect = 0.0
Identities = 653/925 (70%), Positives = 751/925 (81%), Gaps = 9/925 (0%)
Frame = +3
Query: 282 MWRNIAKQVSSRTPSKLFRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFP 461
MWRNI KQ S + R+S S+ RT +G+ Q V+ DK + FE SS N F
Sbjct: 1 MWRNIVKQACST--NFFSRDSSSMLRTFGVVGYSQYPVFHDKARQ---FEFKSSINAGFS 55
Query: 462 ILGFQKIGDISTRDELL-------FRNQINLSGLC--PKSFXXXXXXXXXXXXXXQTDAE 614
F + G+ ++++ L FRN + LS PK + TDAE
Sbjct: 56 ESCFLRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLS------STDAE 109
Query: 615 EGNSVNSSIADDFQELLSEVRKEERRQYSTQWRNRRNIRGVGNEKYKTLRRRQVKIETEA 794
E + S+ D+ QELL E+ KEE+ + + + + G+G KY LRRRQVKIETEA
Sbjct: 110 E----DVSVVDEIQELLEEMSKEEKELEFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEA 165
Query: 795 WEQAAREYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAK 974
WEQAA+EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA EQE RKGK++AAYA
Sbjct: 166 WEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAP 225
Query: 975 YFDHLPADMMAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXX 1154
YFD LPA+MM+VITMHKL+ LLM GGEHG ARVVQAAC+IG AIE EVRI+ FL
Sbjct: 226 YFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKK 285
Query: 1155 XXXXXXXXXXXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKV 1334
SD I+EQ++LR++VT LMKKQKL+ VRQIV Q + +PWGQDA+AKV
Sbjct: 286 TDKDKKAEGGE-SDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKV 344
Query: 1335 GSRLIELILQTAYIQPPANQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVR 1514
GS LIEL++QTAYIQ PA+QLADGPPDIRPAF HT +T+TK+ + +SRRYG+I+CD LVR
Sbjct: 345 GSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVR 404
Query: 1515 KGLERTARHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQL 1694
KGLERTARHMVIPYMPMLVPP+ WTGYDKGAY++LPSYVMRTHGARQQRE+VKR RKQL
Sbjct: 405 KGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQL 464
Query: 1695 RPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXX 1874
P+FEALDTLG+T+WR+NKRVL ++DRIWASGG L DLVDR D+PLPE+P+TEDEA L
Sbjct: 465 EPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKK 524
Query: 1875 XXXXXXXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHL 2054
ENSERHSQRCDTELKLAVAR+MK+E GFFYPHNLDFRGRAYPMHP+LNHL
Sbjct: 525 WKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHL 584
Query: 2055 GSDICRGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSA 2234
GSD+CRGILEF+EGRPLGKSGL WLKIHLANL+A GVDKL +EGRIAFTENHLDDIFDSA
Sbjct: 585 GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 644
Query: 2235 DRPLEGKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALG 2414
DRPLEG+RWWLNA+DPFQCLA CINL+EA+RS SPET ISHIP+HQDGSCNGLQHYAALG
Sbjct: 645 DRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALG 704
Query: 2415 RDKLGAAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKL 2594
RDKLGAAAVNLVAG+KPADVYSG+A RVLDIM+ DAQKDP P+A+ ARLLINQVDRKL
Sbjct: 705 RDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKL 764
Query: 2595 VKQTVMTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAAR 2774
VKQTVMTSVYGVTYIGARDQIKRRLKER+AI D++E+FGA+CYAAK T+TALG+MF+AAR
Sbjct: 765 VKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAAR 824
Query: 2775 SIMSWLGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMV 2954
SIMSWLGDCAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMV
Sbjct: 825 SIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMV 884
Query: 2955 KRQRTAFPPNFVHSLDGSHMMMTAI 3029
KRQRTAFPPNF+HSLDGSHMMMTA+
Sbjct: 885 KRQRTAFPPNFIHSLDGSHMMMTAV 909
>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Malus domestica]
Length = 1025
Score = 1297 bits (3356), Expect = 0.0
Identities = 666/969 (68%), Positives = 756/969 (78%), Gaps = 17/969 (1%)
Frame = +3
Query: 174 MCSSKTPFS-------FSFEIDALRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKL 332
M ++TPFS F+F I FHK NP ST +WRN+AKQ R
Sbjct: 1 MSCAQTPFSPANFTKNFTFRIPI---GFHK-----NPSMISTSLWRNLAKQAIPRNQRGR 52
Query: 333 FRNSHSLSRTCSFLGFGQDSVYPDKCKSRSLFELHSSSNVCFPILGFQKIGDISTRDELL 512
NS S+SR S L F +SV P K F+L S SN+ FP +GF G+IST + L
Sbjct: 53 L-NSQSISRAYSLLCFSXESVSPQXFKP---FQLGSYSNMGFPEVGFPGKGEISTSESYL 108
Query: 513 -------FRNQINLSGLCPKSFXXXXXXXXXXXXXXQTDAEEGNSVNSSIADDFQELLSE 671
R I +G C K + TDAEE + S+ D+ QELL +
Sbjct: 109 GNPSYWSVRTPIGFNGFCAKGYASVAEVVS------STDAEE----DVSLVDEVQELLQQ 158
Query: 672 VRKEERRQYSTQWRNRR--NIRGVGNEKYKTLRRRQVKIETEAWEQAAREYRELLNDMCE 845
+ KE +RQ + WR R +RG+G KY L+RRQ+KIETEAWE+AA+EYREL+ DMCE
Sbjct: 159 MSKEGKRQ-TDHWRRMRLRRVRGMGQAKYLALKRRQIKIETEAWERAAKEYRELMMDMCE 217
Query: 846 QKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVITMHK 1025
KLAPNLPYMKSLFLGWFEP+RN I +EQ+ RKGK+KAAYA Y D LPADMM+VITMHK
Sbjct: 218 HKLAPNLPYMKSLFLGWFEPMRNAIEKEQDLCRKGKNKAAYAPYIDQLPADMMSVITMHK 277
Query: 1026 LMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSDGNI 1205
LM LLM GEHG RVV AAC IG+AIE EVRIH FL SD +
Sbjct: 278 LMGLLMTXGEHGTCRVVAAACTIGEAIEHEVRIHNFLERTRKKKVNKDEENRV--SDDVL 335
Query: 1206 QEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYIQPP 1385
+EQEKL ++VT LMKKQKL+ VR IV K +PW QDA+AKVGSRLIEL++QTA+IQPP
Sbjct: 336 KEQEKLNKKVTNLMKKQKLQVVRHIVRKHDASKPWSQDARAKVGSRLIELLIQTAFIQPP 395
Query: 1386 ANQLADGPPDIRPAFVHTFRTVTKDIK-TSSRRYGVIQCDSLVRKGLERTARHMVIPYMP 1562
A+QLADGPPDIRPAF+HTFRTV KD K TSSRR+GVIQCD LV KG E+T H+VIPYMP
Sbjct: 396 ADQLADGPPDIRPAFIHTFRTVMKDPKNTSSRRFGVIQCDPLVLKGFEKTGSHLVIPYMP 455
Query: 1563 MLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTRWR 1742
MLVPPV WTGYD+G Y +LPSYVMRTHGA+QQRE++KR PR+QL PVF+ALDTLG+TRW+
Sbjct: 456 MLVPPVNWTGYDRGGYFFLPSYVMRTHGAKQQREAIKRTPREQLEPVFKALDTLGNTRWK 515
Query: 1743 VNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSERH 1922
VNKRVL+++DRIWASGG L DLVDR+++PLPE+PDTEDE LL EN ERH
Sbjct: 516 VNKRVLNVVDRIWASGGRLADLVDRDNVPLPEEPDTEDEKLLKKWKWKVKSVKKENMERH 575
Query: 1923 SQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRP 2102
SQRCD ELKL VAR+MK+ EGF+YPHNLDFRGRAYPMHP+LNHLGSD+ RGILEF+EGRP
Sbjct: 576 SQRCDLELKLTVAREMKDAEGFYYPHNLDFRGRAYPMHPYLNHLGSDLSRGILEFAEGRP 635
Query: 2103 LGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDP 2282
LGKSGL WLKIHLANL+A+GVDKL EGRIAF ENHLDDIFDS DRPLEG+RWWL AEDP
Sbjct: 636 LGKSGLRWLKIHLANLYASGVDKLSREGRIAFIENHLDDIFDSVDRPLEGRRWWLKAEDP 695
Query: 2283 FQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 2462
FQCLA CINLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+VNLVAGEK
Sbjct: 696 FQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEK 755
Query: 2463 PADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIG 2642
PADVYSGIA RVLDIM+ DAQKDPAVFP+ALRA++L++QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 756 PADVYSGIAARVLDIMRRDAQKDPAVFPEALRAKVLVDQVDRKLVKQTVMTSVYGVTYIG 815
Query: 2643 ARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIAME 2822
ARDQIKRRLKER I DD E+FG ACYAAK+TLTALG+MFEAARSIMSWLG+CAK+IA E
Sbjct: 816 ARDQIKRRLKERGXISDDEELFGCACYAAKITLTALGEMFEAARSIMSWLGECAKIIASE 875
Query: 2823 NEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHSLD 3002
NEPVRWTTPLGLPVVQPYRK GRHLIKTSLQVL+LQ E+DKVMVKRQRTAFPPNFVHSLD
Sbjct: 876 NEPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLSLQQETDKVMVKRQRTAFPPNFVHSLD 935
Query: 3003 GSHMMMTAI 3029
SHMMMTA+
Sbjct: 936 SSHMMMTAV 944