BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00006262
         (1644 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095574.1| PREDICTED: DNA-directed RNA polymerases I an...   692   0.0  
ref|XP_012849233.1| PREDICTED: DNA-directed RNA polymerases I an...   640   0.0  
emb|CDP13697.1| unnamed protein product [Coffea canephora]            623   0.0  
gb|KHG01265.1| DNA-directed RNA polymerases I and III subunit RP...   621   0.0  
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an...   620   0.0  
ref|XP_009791015.1| PREDICTED: DNA-directed RNA polymerases I an...   618   0.0  
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   616   0.0  
ref|XP_009597355.1| PREDICTED: DNA-directed RNA polymerases I an...   617   0.0  
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob...   614   0.0  
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an...   614   0.0  
ref|XP_015059438.1| PREDICTED: DNA-directed RNA polymerases I an...   613   0.0  
ref|XP_010248371.1| PREDICTED: DNA-directed RNA polymerases I an...   609   0.0  
ref|XP_010534813.1| PREDICTED: DNA-directed RNA polymerases I an...   592   0.0  
gb|KDO59170.1| hypothetical protein CISIN_1g016805mg [Citrus sin...   583   0.0  
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr...   585   0.0  
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an...   583   0.0  
ref|XP_015577021.1| PREDICTED: DNA-directed RNA polymerases I an...   579   0.0  
ref|XP_012071041.1| PREDICTED: DNA-directed RNA polymerases I an...   575   0.0  
gb|KVI10422.1| DNA-directed RNA polymerase, dimerization [Cynara...   564   0.0  
ref|XP_015900662.1| PREDICTED: DNA-directed RNA polymerases I an...   564   0.0  

>ref|XP_011095574.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            [Sesamum indicum]
          Length = 387

 Score =  692 bits (1787), Expect = 0.0
 Identities = 336/387 (86%), Positives = 362/387 (93%)
 Frame = -1

Query: 1518 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1339
            MVSE E SETMKE+KT K+PVWDLPDVPKG LPPHL+LQRTRVLCTFDAPTHTE+ QYSG
Sbjct: 1    MVSESEDSETMKEEKTPKIPVWDLPDVPKGGLPPHLELQRTRVLCTFDAPTHTENFQYSG 60

Query: 1338 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1159
            AYA+MGVDNSLRLEEFR+NFRVEVI LTEDDMEFDMIGIDAA+ANAFRRILIAELPTMAI
Sbjct: 61   AYASMGVDNSLRLEEFRSNFRVEVISLTEDDMEFDMIGIDAAIANAFRRILIAELPTMAI 120

Query: 1158 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGS 979
            EKVL+ANNTSV+QDEVLAHRLGL+PLKVDPRLFNY  ENDEPNEKNTIVFKLH RCERGS
Sbjct: 121  EKVLIANNTSVVQDEVLAHRLGLVPLKVDPRLFNYKSENDEPNEKNTIVFKLHVRCERGS 180

Query: 978  PRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHD 799
             RIKV +NELKWLP+GSE IL TEK   DSTSKTKTYTSFNC QD+L EF++NPI PKHD
Sbjct: 181  SRIKVKSNELKWLPHGSEFILGTEKAAADSTSKTKTYTSFNCSQDSLLEFVNNPIGPKHD 240

Query: 798  DILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVK 619
            DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+V LQ+IED  AEELVK
Sbjct: 241  DIILAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEIVFLQEIEDEKAEELVK 300

Query: 618  KCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTG 439
            KCPV VFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDK ++LRRVKDHFIFTIES G
Sbjct: 301  KCPVRVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKRVALRRVKDHFIFTIESAG 360

Query: 438  ALPPEILFTEAVQILEEKCERVISELS 358
            ALPPE+LFTEAV+ILE+KCERVI+ELS
Sbjct: 361  ALPPEVLFTEAVKILEDKCERVITELS 387


>ref|XP_012849233.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            [Erythranthe guttata] gi|604314748|gb|EYU27454.1|
            hypothetical protein MIMGU_mgv1a008198mg [Erythranthe
            guttata]
          Length = 381

 Score =  640 bits (1652), Expect = 0.0
 Identities = 306/376 (81%), Positives = 343/376 (91%)
 Frame = -1

Query: 1485 KEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSL 1306
            +EQ+T K+PVWDLPDVP G LP HL+LQRTR +CT DAP HTE+IQYSGAYA+MGVDNS+
Sbjct: 6    EEQRTEKIPVWDLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSM 65

Query: 1305 RLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSV 1126
            R E+F  NFRVEVI+L +D+MEFDM+GIDA+LANAFRRILI+ELPTMAIE VLVANNTSV
Sbjct: 66   RFEKFCKNFRVEVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSV 125

Query: 1125 IQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELK 946
            +QDEVLAHRLGLIPLKVDPRLFNY  END+P+EKNTIVFKLH+RCE+ S RI V ++ELK
Sbjct: 126  VQDEVLAHRLGLIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRCEKKSSRINVKSSELK 185

Query: 945  WLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQ 766
            WLP GSE  LSTEKPTQDSTSK KTYTSF C QD+LPEF  NPI P HDDI +A LGPGQ
Sbjct: 186  WLPGGSEFALSTEKPTQDSTSKVKTYTSFTCSQDSLPEFSSNPIAPTHDDITLAVLGPGQ 245

Query: 765  EIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIED 586
            EIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LLQ+IED  AEEL+KKCPV VFDIED
Sbjct: 246  EIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVILLQEIEDEKAEELIKKCPVNVFDIED 305

Query: 585  IGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEA 406
            IGKGRKRATVARPRSCTLCRECIRGDDWDKL++L+RVKDHFIFTIESTGALPP++LFTEA
Sbjct: 306  IGKGRKRATVARPRSCTLCRECIRGDDWDKLVALQRVKDHFIFTIESTGALPPDVLFTEA 365

Query: 405  VQILEEKCERVISELS 358
            V+ILE+KCERVI+E+S
Sbjct: 366  VKILEDKCERVITEMS 381


>emb|CDP13697.1| unnamed protein product [Coffea canephora]
          Length = 395

 Score =  623 bits (1606), Expect = 0.0
 Identities = 298/376 (79%), Positives = 341/376 (90%)
 Frame = -1

Query: 1485 KEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSL 1306
            ++++T K+PVWDLPDVPKG LP HLQLQRTRV+C  +APTHTE+IQYSGAYAAMGVDNS 
Sbjct: 20   EKERTPKIPVWDLPDVPKGNLPSHLQLQRTRVVCNKEAPTHTENIQYSGAYAAMGVDNSF 79

Query: 1305 RLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSV 1126
            RL++FR N RVEV++LTEDD+EFD+IGIDA+LANAFRRILIAELPTMAIEKVL+ANNTSV
Sbjct: 80   RLDDFRKNLRVEVVRLTEDDIEFDLIGIDASLANAFRRILIAELPTMAIEKVLIANNTSV 139

Query: 1125 IQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELK 946
            IQDEVLAHRLGLIPL+VDPRLF Y+ END PNEKNTIVFKLHARCE+G PR  V ++ELK
Sbjct: 140  IQDEVLAHRLGLIPLQVDPRLFEYISENDIPNEKNTIVFKLHARCEKGGPRSTVKSDELK 199

Query: 945  WLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQ 766
            WLPNGSE +L+TE    ++ SK KTYTSF+  QD+LPEF +NPI PK+ DI+IAKLGPGQ
Sbjct: 200  WLPNGSEFLLATENSASNTASKQKTYTSFSSSQDSLPEFSNNPIAPKYPDIIIAKLGPGQ 259

Query: 765  EIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIED 586
            EIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQ+++   AEELV KCPV VFDIED
Sbjct: 260  EIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEVKGVKAEELVNKCPVKVFDIED 319

Query: 585  IGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEA 406
            IGKG KRA VARPRSCTLCRECIRGD+W+K ++LRRVKDHFIFT+ESTGALPPE+LFTEA
Sbjct: 320  IGKGGKRANVARPRSCTLCRECIRGDEWEKFVALRRVKDHFIFTVESTGALPPEVLFTEA 379

Query: 405  VQILEEKCERVISELS 358
            V+ILE+KCERVI+ELS
Sbjct: 380  VKILEDKCERVITELS 395


>gb|KHG01265.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Gossypium
            arboreum]
          Length = 380

 Score =  621 bits (1601), Expect = 0.0
 Identities = 291/374 (77%), Positives = 339/374 (90%)
 Frame = -1

Query: 1479 QKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRL 1300
            ++  K  +WDLPDVP G+LPPHL+LQR+RV C  DAP HTESIQYSGAYA+MG+DNS RL
Sbjct: 7    EEKKKFSIWDLPDVPMGQLPPHLELQRSRVSCNKDAPIHTESIQYSGAYASMGIDNSSRL 66

Query: 1299 EEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQ 1120
            + F NNFRVEV++L EDD+EFDMIGIDAA+AN+FRRILIAELPTMAIEKVL+ANNTS+IQ
Sbjct: 67   DRFSNNFRVEVVRLNEDDIEFDMIGIDAAIANSFRRILIAELPTMAIEKVLIANNTSIIQ 126

Query: 1119 DEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWL 940
            DEVLAHRLGL+P++VDPRLF+Y+ END+PNEKNTIVFKLH +C+RGSPRI V ++ LKWL
Sbjct: 127  DEVLAHRLGLVPIRVDPRLFDYLSENDQPNEKNTIVFKLHVQCKRGSPRITVKSDALKWL 186

Query: 939  PNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEI 760
            PNGSEL+  T   T DS+SK +TYT F C Q+T+PEF+ NPI+PK+ DI+IAKLGPGQEI
Sbjct: 187  PNGSELVKETRNATSDSSSKPETYTYFGCSQETVPEFVKNPIIPKYPDIIIAKLGPGQEI 246

Query: 759  ELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIG 580
            ELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED +AEEL  KCPV VFDIED+G
Sbjct: 247  ELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEDIEDDLAEELKSKCPVNVFDIEDLG 306

Query: 579  KGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQ 400
            KGR+RATVARPR+CTLCRECIRGDDW+K ++LRRVKDHFIFTIESTGALPPE+LFTEAV+
Sbjct: 307  KGRRRATVARPRACTLCRECIRGDDWEKRVALRRVKDHFIFTIESTGALPPEVLFTEAVK 366

Query: 399  ILEEKCERVISELS 358
            ILE+KCERVI+ELS
Sbjct: 367  ILEDKCERVITELS 380


>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Solanum tuberosum]
          Length = 393

 Score =  620 bits (1598), Expect = 0.0
 Identities = 302/395 (76%), Positives = 348/395 (88%)
 Frame = -1

Query: 1542 GSQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTH 1363
            G+  ++  M SE   S + +E+  TKV VWDLPD+PKGKLPPH++LQRTRVLC   APT+
Sbjct: 2    GTATESESMDSE---STSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTN 58

Query: 1362 TESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILI 1183
            TE++ YSGAYAAMGVDNS+R E+FRNNF+VE+++L ED++EFDMIGID +LANAFRRILI
Sbjct: 59   TENVNYSGAYAAMGVDNSVRFEQFRNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILI 118

Query: 1182 AELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKL 1003
            AELPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP++VDPRLF YM END PNEKNTIVFKL
Sbjct: 119  AELPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKL 178

Query: 1002 HARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLD 823
            HARC +GS R++V ++ELKWLPNGSELIL TE     S++K KTYTSF+C QDTLPEF +
Sbjct: 179  HARCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSN 238

Query: 822  NPIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIED 643
            +PI PK  DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED
Sbjct: 239  DPIAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIED 298

Query: 642  GMAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHF 463
              AE LVKKCPV VFDIEDIGKG+KRATVARPR CTLCRECIR + WDK ++LRRV DHF
Sbjct: 299  DEAEALVKKCPVKVFDIEDIGKGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHF 358

Query: 462  IFTIESTGALPPEILFTEAVQILEEKCERVISELS 358
            IFTIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 359  IFTIESTGALPPEVLFTEAVKILEEKCERVITELS 393


>ref|XP_009791015.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            isoform X1 [Nicotiana sylvestris]
            gi|698488858|ref|XP_009791016.1| PREDICTED: DNA-directed
            RNA polymerases I and III subunit rpac1 isoform X1
            [Nicotiana sylvestris] gi|698488860|ref|XP_009791017.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            rpac1 isoform X1 [Nicotiana sylvestris]
          Length = 398

 Score =  618 bits (1594), Expect = 0.0
 Identities = 296/394 (75%), Positives = 349/394 (88%)
 Frame = -1

Query: 1539 SQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHT 1360
            ++++++   S   + E++   K  K+ VWDLPDVP+GKLPPHL+LQRTRV C F APT+T
Sbjct: 5    TESESMDTESTSTQGESIDSPKIEKISVWDLPDVPQGKLPPHLELQRTRVKCDFLAPTNT 64

Query: 1359 ESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIA 1180
            ++IQYSGAYA+MGVDNS+R E+FRNNF+VEV++L ED++EFDMIGID +LANAFRRILIA
Sbjct: 65   QNIQYSGAYASMGVDNSVRFEQFRNNFKVEVVRLDEDELEFDMIGIDPSLANAFRRILIA 124

Query: 1179 ELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLH 1000
            E+PT+AIEKVL+ANNTS+IQDEVLAHRLGLIP+KVDPRLF YM END PNEKNTIVFKLH
Sbjct: 125  EVPTVAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLH 184

Query: 999  ARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDN 820
            A CE+G  R++V ++ELKWLP+GSE IL TE    +S++K KTYTSF+C QD+LPEF + 
Sbjct: 185  AHCEKGGNRLRVLSSELKWLPSGSEFILGTESQASNSSAKPKTYTSFSCSQDSLPEFSNG 244

Query: 819  PIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDG 640
            PI P+  DI+IAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQDIED 
Sbjct: 245  PIAPRDADIIIAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQDIEDD 304

Query: 639  MAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFI 460
             AEELVKKCPV VFDIEDIGKG+KRATVARPR+CTLCRECIR + WDK +++RRVKDHFI
Sbjct: 305  EAEELVKKCPVKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVAVRRVKDHFI 364

Query: 459  FTIESTGALPPEILFTEAVQILEEKCERVISELS 358
            FTIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 365  FTIESTGALPPEVLFTEAVKILEEKCERVITELS 398


>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|731433327|ref|XP_010644604.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1 [Vitis vinifera] gi|296089944|emb|CBI39763.3|
            unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  616 bits (1589), Expect = 0.0
 Identities = 292/368 (79%), Positives = 334/368 (90%)
 Frame = -1

Query: 1461 PVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNN 1282
            P  D+PDVPKG+LPPH++LQRTRVLC FDAPTHTE++QYSGAY++MGVDNSLR+++F NN
Sbjct: 5    PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64

Query: 1281 FRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAH 1102
            FRVEVI+L+EDDMEFDMIGID ++ANAFRRILIAELPTMAIEKVL+ANNTS++QDEVLAH
Sbjct: 65   FRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAH 124

Query: 1101 RLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSEL 922
            RLGLIP+  DPRLF+ + END PNEKNTIVF LH RCERG PR+ V +NELKWLP+GSE 
Sbjct: 125  RLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEF 184

Query: 921  ILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 742
             L+TE  T  STSK KTYTSF+C QD+LPEF D  I PKH DI+IAKLGPGQEIELEAHA
Sbjct: 185  PLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHA 244

Query: 741  VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 562
            VKG+GKTHAKWSPVATAWYRMLPEVVLLQ+IED  AEELVKKCPV VFDIEDI KG+K+A
Sbjct: 245  VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKA 304

Query: 561  TVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 382
            TVARPR+CTLCRECIRGDDWDK +++RRVK+HFIFTIESTGALPPE+LF EAV++LE+KC
Sbjct: 305  TVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKC 364

Query: 381  ERVISELS 358
            ERVI+ELS
Sbjct: 365  ERVITELS 372


>ref|XP_009597355.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            [Nicotiana tomentosiformis]
          Length = 393

 Score =  617 bits (1590), Expect = 0.0
 Identities = 298/393 (75%), Positives = 346/393 (88%), Gaps = 4/393 (1%)
 Frame = -1

Query: 1524 VGMVSEKEKSETMKEQ----KTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 1357
            +G  +E E + T  E     K  K+ VWDLPDVP+GKLPPHL+LQRTRV+C F APT+T+
Sbjct: 1    MGSPTESESTWTQGESIDCTKIAKISVWDLPDVPQGKLPPHLELQRTRVMCDFLAPTNTQ 60

Query: 1356 SIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAE 1177
            +IQYSGAYA+MGVDNS+R E+FRNNF+VEV+ L ED++EFDMIGID +LANAFRRILIAE
Sbjct: 61   NIQYSGAYASMGVDNSVRFEQFRNNFKVEVVTLDEDELEFDMIGIDPSLANAFRRILIAE 120

Query: 1176 LPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHA 997
            +PTMAIEKVL+ANNTS+IQDEVLAHRLGLIP+K+DPRLF YM END PNEKNTIVFKLHA
Sbjct: 121  VPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKIDPRLFEYMSENDVPNEKNTIVFKLHA 180

Query: 996  RCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNP 817
             CE+G  R++V ++ELKWLPNGSE IL TE    +S++K KTYTSF+C QD+LPEF ++P
Sbjct: 181  LCEKGGERLRVLSSELKWLPNGSEFILGTESQASNSSAKPKTYTSFSCSQDSLPEFSNDP 240

Query: 816  IVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGM 637
            I P+  DI+IAKLGPGQEIELE HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED  
Sbjct: 241  IAPRDADIIIAKLGPGQEIELEVHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDE 300

Query: 636  AEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIF 457
            AEELVKKCPV VFDIEDIGKG+KRATVARPR+CTLCRECIR + WDK +++RRVKDHFIF
Sbjct: 301  AEELVKKCPVKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVAVRRVKDHFIF 360

Query: 456  TIESTGALPPEILFTEAVQILEEKCERVISELS 358
            TIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 361  TIESTGALPPEVLFTEAVKILEEKCERVITELS 393


>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
            gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
            isoform 1 [Theobroma cacao]
          Length = 383

 Score =  614 bits (1584), Expect = 0.0
 Identities = 291/374 (77%), Positives = 336/374 (89%)
 Frame = -1

Query: 1479 QKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRL 1300
            ++  K  +WDLPDVP G+LPPHL+LQRTRVLC  DAP HTES+ YSGAYA+MGVDNSLRL
Sbjct: 10   EEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRL 69

Query: 1299 EEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQ 1120
            + F +NFRVEV++LTE+DMEFDMIGIDAA+ANAFRRILIAELPTMAIEKVL+ANNTSV+Q
Sbjct: 70   DHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQ 129

Query: 1119 DEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWL 940
            DEVLAHRLGLIP+ VDPRLF YM END+PNEKNTIVFKLH  C+RGSPRI V ++ELKWL
Sbjct: 130  DEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWL 189

Query: 939  PNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEI 760
            PNGSELI  + K   DS SK +TYTSF+C QDTLPEF +NPI PK+ DI+I+KLGPGQEI
Sbjct: 190  PNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEI 249

Query: 759  ELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIG 580
            ELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE L  KCPV VFDIED+G
Sbjct: 250  ELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLG 309

Query: 579  KGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQ 400
            KG+KRATVARPR+CTLCRECIR ++W+K +++ RVKDHFIFTIESTGALPPE+LFTEAV+
Sbjct: 310  KGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVK 369

Query: 399  ILEEKCERVISELS 358
            ILE+KCERVI+ELS
Sbjct: 370  ILEDKCERVITELS 383


>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            [Solanum lycopersicum] gi|723748850|ref|XP_010313951.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            rpac1 [Solanum lycopersicum]
          Length = 393

 Score =  614 bits (1584), Expect = 0.0
 Identities = 297/393 (75%), Positives = 344/393 (87%), Gaps = 4/393 (1%)
 Frame = -1

Query: 1524 VGMVSEKEKSET----MKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 1357
            +G  +E E  ++     +E+  TKV VWDLPD+PKGKLPPH++LQRTRVLC   APT+TE
Sbjct: 1    MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE 60

Query: 1356 SIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAE 1177
            ++ YSGAYAAMGVDNS+R E+FR+NF+VE+++L ED++EFDMIGID +LANAFRRILIAE
Sbjct: 61   NVNYSGAYAAMGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAE 120

Query: 1176 LPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHA 997
            LPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP+KVDPRLF YM END PNEKNTIVFKLH 
Sbjct: 121  LPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHV 180

Query: 996  RCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNP 817
            RC +GS R++V ++ELKWLPNGSELIL TE     S++K KTYTSF+C QDT PEF D P
Sbjct: 181  RCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEP 240

Query: 816  IVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGM 637
            I PK  DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+DIED  
Sbjct: 241  IAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDE 300

Query: 636  AEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIF 457
            AE LVKKCP+ VFDIEDIGKG+KRATVARPR+CTLCRECIR + WDK ++LRRV DHFIF
Sbjct: 301  AEALVKKCPLKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIF 360

Query: 456  TIESTGALPPEILFTEAVQILEEKCERVISELS 358
            TIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 361  TIESTGALPPEVLFTEAVKILEEKCERVITELS 393


>ref|XP_015059438.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1
            [Solanum pennellii]
          Length = 393

 Score =  613 bits (1580), Expect = 0.0
 Identities = 296/393 (75%), Positives = 344/393 (87%), Gaps = 4/393 (1%)
 Frame = -1

Query: 1524 VGMVSEKEKSET----MKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 1357
            +G  +E E  ++     +E+  TKV VWDLPD+PKGKLPPH++LQRTRVLC   APT+TE
Sbjct: 1    MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE 60

Query: 1356 SIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAE 1177
            ++ YSGAYAAMGVDNS+R E+FR+NF+VE+++L ED++EFDMIGID +LANAFRRILIAE
Sbjct: 61   NVNYSGAYAAMGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAE 120

Query: 1176 LPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHA 997
            LPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP+KVDPRLF YM END PNEKNTIVFKLH 
Sbjct: 121  LPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHV 180

Query: 996  RCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNP 817
            RC +GS R++V ++ELKWLPNGSELIL TE     S++K KTYTSF+C QDT PEF D+P
Sbjct: 181  RCTKGSGRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDDP 240

Query: 816  IVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGM 637
            I PK  DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+DIED  
Sbjct: 241  IAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDE 300

Query: 636  AEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIF 457
            AE LVKKCPV VFDIEDIGKG++RATV RPR+CTLCRECIR + WDK ++LRRV DHFIF
Sbjct: 301  AEALVKKCPVKVFDIEDIGKGKRRATVVRPRACTLCRECIREEGWDKNVALRRVNDHFIF 360

Query: 456  TIESTGALPPEILFTEAVQILEEKCERVISELS 358
            TIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 361  TIESTGALPPEVLFTEAVKILEEKCERVITELS 393


>ref|XP_010248371.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            isoform X1 [Nelumbo nucifera]
          Length = 372

 Score =  609 bits (1570), Expect = 0.0
 Identities = 293/370 (79%), Positives = 332/370 (89%)
 Frame = -1

Query: 1467 KVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFR 1288
            +V   DLPDVPKG LPPHL+LQRTRVLC  DAPTHTE+IQYSGAYA++GVDNSLRL++F 
Sbjct: 3    RVSALDLPDVPKGHLPPHLELQRTRVLCASDAPTHTETIQYSGAYASVGVDNSLRLDQFC 62

Query: 1287 NNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVL 1108
             +FRVEVI+LTEDDMEFDM+GID +LANAFRRILIAE+PTMAIEKVL+ANNTSV+QDEVL
Sbjct: 63   RDFRVEVIRLTEDDMEFDMVGIDPSLANAFRRILIAEVPTMAIEKVLIANNTSVVQDEVL 122

Query: 1107 AHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGS 928
            AHRLGLIP+KVDPRLF YM END PNEKNTIVFKLH +C+   PR+ V ++ELKWL NGS
Sbjct: 123  AHRLGLIPIKVDPRLFEYMSENDTPNEKNTIVFKLHVKCKIKGPRLTVKSDELKWLSNGS 182

Query: 927  ELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEA 748
            EL L  E  T D  SK KTYT+F C Q +LPEF +NPI PKH DI+IAKLGPGQEIELEA
Sbjct: 183  ELPLEMESHTSDPASKQKTYTAFTCSQVSLPEFSNNPIAPKHQDIIIAKLGPGQEIELEA 242

Query: 747  HAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRK 568
            HAVKG+GKTHAKWSPV+TAWYRMLPEVVLLQ++ED MAEELVKKCPV VFDIED+GKG+K
Sbjct: 243  HAVKGMGKTHAKWSPVSTAWYRMLPEVVLLQEVEDEMAEELVKKCPVNVFDIEDVGKGKK 302

Query: 567  RATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEE 388
            RATVAR R+CTLCRECIRG+DW+K ++LRRVKDHFIFTIESTGALPPE+LFTEAV+ILE+
Sbjct: 303  RATVARSRACTLCRECIRGEDWEKRVALRRVKDHFIFTIESTGALPPEVLFTEAVKILED 362

Query: 387  KCERVISELS 358
            KCERVI+ELS
Sbjct: 363  KCERVITELS 372


>ref|XP_010534813.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Tarenaya hassleriana]
          Length = 379

 Score =  592 bits (1527), Expect = 0.0
 Identities = 289/387 (74%), Positives = 334/387 (86%)
 Frame = -1

Query: 1518 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1339
            MV E+E+     +  T K  +WDLPDVP  KLPPHL+LQRTRV+C  DAP HTE I YSG
Sbjct: 1    MVGEEEQKG---DNTTKKFNIWDLPDVPS-KLPPHLELQRTRVVCNKDAPIHTEGITYSG 56

Query: 1338 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1159
            AYA+MGVDNS+RLE F  NFRVEVI+LTEDD+EFDMIGIDAA+AN+FRRILIAELPTMAI
Sbjct: 57   AYASMGVDNSMRLENFSENFRVEVIRLTEDDLEFDMIGIDAAMANSFRRILIAELPTMAI 116

Query: 1158 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGS 979
            EKV +ANNTS+IQDEVLAHRLGLIP+  D R+F Y+ END+PNEKNTIVFKLH RCE+G 
Sbjct: 117  EKVFIANNTSLIQDEVLAHRLGLIPVAADARIFEYLSENDQPNEKNTIVFKLHVRCEKGG 176

Query: 978  PRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHD 799
            PR+ V +NELKWLPNGSE I    K +  STSKT+TYTSF+  QD+ PEF +NPI P+H 
Sbjct: 177  PRLTVKSNELKWLPNGSEFI----KDSGGSTSKTETYTSFSRSQDSFPEFANNPIAPRHS 232

Query: 798  DILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVK 619
            DI+IAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE+LVK
Sbjct: 233  DIIIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEQLVK 292

Query: 618  KCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTG 439
             CP+ VFDIEDIGKGRKRATVARPR+CTLCRECIR D W+  ++LRRV++HFIFTIES G
Sbjct: 293  TCPLNVFDIEDIGKGRKRATVARPRACTLCRECIREDGWENRVALRRVRNHFIFTIESDG 352

Query: 438  ALPPEILFTEAVQILEEKCERVISELS 358
            ++PPEILFTEAV+ILEEKCERVI+ELS
Sbjct: 353  SMPPEILFTEAVKILEEKCERVITELS 379


>gb|KDO59170.1| hypothetical protein CISIN_1g016805mg [Citrus sinensis]
            gi|641840249|gb|KDO59171.1| hypothetical protein
            CISIN_1g016805mg [Citrus sinensis]
          Length = 382

 Score =  583 bits (1504), Expect = 0.0
 Identities = 289/383 (75%), Positives = 332/383 (86%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1503 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1324
            E+ ET K+++     +WDLPDVP+ KLPPH++ QRTRV C  DAP HTE++ YSGAYA+M
Sbjct: 3    EREETEKKKEAESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 61

Query: 1323 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1144
            GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 62   GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 121

Query: 1143 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKV 964
            ANNTSVIQDEVLAHRLGLIP+ VDPRLF YM END  NEKNTIVFKLH  CERG PR+ V
Sbjct: 122  ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 181

Query: 963  TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 784
             TNELKWLPNGSEL L T KP  + +SK +TYTSF+  QD LPEF +NPI P   DI IA
Sbjct: 182  KTNELKWLPNGSELPLET-KPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIA 239

Query: 783  KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 604
            +LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED  AE+LVK CPV 
Sbjct: 240  RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 299

Query: 603  VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 427
            VFDIEDIG G+KRATVA+PR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 300  VFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 359

Query: 426  EILFTEAVQILEEKCERVISELS 358
            E LFTEAV+ILE+KCERVI+ELS
Sbjct: 360  ETLFTEAVKILEDKCERVITELS 382


>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
            gi|557555856|gb|ESR65870.1| hypothetical protein
            CICLE_v10008413mg [Citrus clementina]
          Length = 421

 Score =  585 bits (1508), Expect = 0.0
 Identities = 290/383 (75%), Positives = 332/383 (86%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1503 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1324
            E+ ET K+++     +WDLPDVP+ KLPPH++ QRTRV C  DAP HTE++ YSGAYA+M
Sbjct: 42   EREETEKKKEAESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 100

Query: 1323 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1144
            GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 101  GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 160

Query: 1143 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKV 964
            ANNTSVIQDEVLAHRLGLIP+ VDPRLF YM END  NEKNTIVFKLH  CERG PR+ V
Sbjct: 161  ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 220

Query: 963  TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 784
             TNELKWLPNGSEL L T KP  + +SK +TYTSF+  QD LPEF +NPI P   DI IA
Sbjct: 221  KTNELKWLPNGSELPLET-KPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIA 278

Query: 783  KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 604
            +LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED  AE+LVK CPV 
Sbjct: 279  RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 338

Query: 603  VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 427
            VFDIEDIG G+KRATVARPR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 339  VFDIEDIGSGKKRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 398

Query: 426  EILFTEAVQILEEKCERVISELS 358
            E LFTEAV+ILE+KCERVI+ELS
Sbjct: 399  ETLFTEAVKILEDKCERVITELS 421


>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Citrus sinensis]
          Length = 382

 Score =  583 bits (1502), Expect = 0.0
 Identities = 289/383 (75%), Positives = 332/383 (86%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1503 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1324
            E+ ET K+++     +WDLPDVP+ KLPPH++ QRTRV C  DAP HTE++ YSGAYA+M
Sbjct: 3    EREETEKKKEGESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 61

Query: 1323 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1144
            GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 62   GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 121

Query: 1143 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKV 964
            ANNTSVIQDEVLAHRLGLIP+ VDPRLF YM END  NEKNTIVFKLH  CERG PR+ V
Sbjct: 122  ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 181

Query: 963  TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 784
             TNELKWLPNGSEL L T KP  +  SK +TYTSF+  QD+LPEF +NPI P   DI IA
Sbjct: 182  KTNELKWLPNGSELPLET-KPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITIA 239

Query: 783  KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 604
            +LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED  AE+LVK CPV 
Sbjct: 240  RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 299

Query: 603  VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 427
            VFDIEDIG G+KRATVA+PR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 300  VFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 359

Query: 426  EILFTEAVQILEEKCERVISELS 358
            E LFTEAV+ILE+KCERVI+ELS
Sbjct: 360  ETLFTEAVKILEDKCERVITELS 382


>ref|XP_015577021.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Ricinus communis] gi|223538024|gb|EEF39637.1|
            DNA-directed RNA polymerase I/III subunits, putative
            [Ricinus communis]
          Length = 374

 Score =  579 bits (1492), Expect = 0.0
 Identities = 282/380 (74%), Positives = 328/380 (86%)
 Frame = -1

Query: 1497 SETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 1318
            S+   ++K  K  +WDLPDVP G+LPPHLQLQRTRV+C  DAP HT++I YSGAYA++GV
Sbjct: 3    SKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGV 62

Query: 1317 DNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVAN 1138
            DNSL+L+ FR+NF+VEVI+LT+DDMEFDMIGIDAA+ANAFRRILI+ELPTMAIEKVL+AN
Sbjct: 63   DNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIAN 122

Query: 1137 NTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTT 958
            NTS+IQDEVLAHRLGLIP+  DPRLF Y+  ND PNEKNTIVFKLHA C+RG PR  V +
Sbjct: 123  NTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYS 182

Query: 957  NELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKL 778
             ELKWLP GS+L+  +EK    + SK  TYTSF  +QD +P+    P+ P  D I++AKL
Sbjct: 183  EELKWLPGGSQLLKESEK----ADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKL 234

Query: 777  GPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVF 598
            GPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED +AEEL KKCPV VF
Sbjct: 235  GPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVF 294

Query: 597  DIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEIL 418
            DIEDIG G+KRATVARPR+CTLCRECIRG +WDK +SLRRVKDHFIFTIESTGALPPE+L
Sbjct: 295  DIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVL 354

Query: 417  FTEAVQILEEKCERVISELS 358
            FTEAV++LE+KCERVI+ELS
Sbjct: 355  FTEAVKVLEDKCERVITELS 374


>ref|XP_012071041.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Jatropha curcas] gi|643732106|gb|KDP39298.1|
            hypothetical protein JCGZ_01055 [Jatropha curcas]
          Length = 376

 Score =  575 bits (1482), Expect = 0.0
 Identities = 282/381 (74%), Positives = 328/381 (86%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1497 SETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 1318
            SE   +Q+ +K  +WDLPDVP G+LPPHLQLQRTRV C  DAP HT+SIQYSGAYA++G+
Sbjct: 2    SEQKNKQENSKFSIWDLPDVPMGQLPPHLQLQRTRVFCKADAPIHTDSIQYSGAYASLGI 61

Query: 1317 DNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVAN 1138
            DNSLRL+ FR+NF+VEVI+LT+D+M FDMIGIDAA+ANAFRRILI+ELPTMAIEKVLVAN
Sbjct: 62   DNSLRLDYFRDNFKVEVIRLTKDEMVFDMIGIDAAIANAFRRILISELPTMAIEKVLVAN 121

Query: 1137 NTSVIQDEVLAHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTT 958
            NTS+IQDEVLAHRLGLIP+  DPRLF Y+  +D PNEKNTIVFKLHA+C+RG PR  V +
Sbjct: 122  NTSLIQDEVLAHRLGLIPINADPRLFEYLSASDTPNEKNTIVFKLHAQCKRGEPRRTVYS 181

Query: 957  NELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKL 778
             ELKWLPNGSE    +EK      SK  TYTSF+C QD+L  F  NPI P  D I++AKL
Sbjct: 182  EELKWLPNGSEFAKESEK----VDSKPSTYTSFSCSQDSL--FSSNPIRPWEDKIIVAKL 235

Query: 777  GPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVF 598
            GPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+D++D +AEEL +KCPV VF
Sbjct: 236  GPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEDVQDEVAEELKRKCPVNVF 295

Query: 597  DIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEI 421
            DIEDIG G+KRATVARPR+CTLCRECIR G+ W K ++LRRVKDHFIFTIESTG+LPPE+
Sbjct: 296  DIEDIGNGKKRATVARPRACTLCRECIRGGETWVKRVALRRVKDHFIFTIESTGSLPPEV 355

Query: 420  LFTEAVQILEEKCERVISELS 358
            LFTEAV+ILE+KCERV++ELS
Sbjct: 356  LFTEAVKILEDKCERVVTELS 376


>gb|KVI10422.1| DNA-directed RNA polymerase, dimerization [Cynara cardunculus var.
            scolymus]
          Length = 369

 Score =  564 bits (1454), Expect = 0.0
 Identities = 279/371 (75%), Positives = 327/371 (88%), Gaps = 1/371 (0%)
 Frame = -1

Query: 1467 KVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFR 1288
            K+P+WDLP++PK +LPPHL LQ+TRV C  DAPTHTE+I YSGAYAA+GVDNSLRL+EFR
Sbjct: 3    KIPLWDLPELPKNQLPPHLYLQKTRVFCNNDAPTHTENIHYSGAYAALGVDNSLRLDEFR 62

Query: 1287 NNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVL 1108
             NF+V+VIKL E+DMEFD+IGIDA++ANAFRRILI+ELPTMAIEKVLVAN++SV+QDEVL
Sbjct: 63   KNFKVKVIKLNEEDMEFDLIGIDASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVL 122

Query: 1107 AHRLGLIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGS-PRIKVTTNELKWLPNG 931
            A RLGL+P+KVDPRLF+YM END PN+KN+IVFKLH +C+RGS  R  V +++LKWLP G
Sbjct: 123  AQRLGLVPIKVDPRLFDYMSENDVPNQKNSIVFKLHYKCDRGSGERRTVYSHDLKWLPFG 182

Query: 930  SELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELE 751
            SE +L TE  + DSTSK KTYTSF   QD+LPEF +NPI      I+I+KLGPGQEIELE
Sbjct: 183  SEYVLPTES-SSDSTSKPKTYTSFTSSQDSLPEFANNPITVT-PGIIISKLGPGQEIELE 240

Query: 750  AHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGR 571
            AHAVKGVGKTHAKWSPVAT+WYRMLPEV+LLQDIED  A +LVKKCPV VFDIED+  GR
Sbjct: 241  AHAVKGVGKTHAKWSPVATSWYRMLPEVILLQDIEDDDAHKLVKKCPVNVFDIEDV--GR 298

Query: 570  KRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILE 391
            +RATVARPRSCTLCRECIR   W++ ++LRRVKDHFIFTIESTGALPPE+LFTEAV+ILE
Sbjct: 299  ERATVARPRSCTLCRECIREPGWEEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILE 358

Query: 390  EKCERVISELS 358
            +KCERVI+ELS
Sbjct: 359  DKCERVITELS 369


>ref|XP_015900662.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Ziziphus jujuba]
          Length = 373

 Score =  564 bits (1454), Expect = 0.0
 Identities = 276/366 (75%), Positives = 321/366 (87%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1452 DLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNFRV 1273
            +L DVP GKLPPHL+LQRTRV C  DAP HT++ QYSGAYA++GVDNS+RL+ FR+NFRV
Sbjct: 10   ELSDVPTGKLPPHLELQRTRVECKADAPIHTDTFQYSGAYASIGVDNSVRLDNFRDNFRV 69

Query: 1272 EVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHRLG 1093
            EVI+LT+++MEFDMIGID ALANAFRRILIAE+PTMAIEKVL+ANNTSV+QDEVL+HRLG
Sbjct: 70   EVIRLTDEEMEFDMIGIDPALANAFRRILIAEVPTMAIEKVLIANNTSVVQDEVLSHRLG 129

Query: 1092 LIPLKVDPRLFNYMIENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELILS 913
            LIP+K DPRLF +  EN  P EKNTIVFKLH RCE+G PR+ V +NELKWLPNGSE  L 
Sbjct: 130  LIPIKADPRLFEF-TENGAPTEKNTIVFKLHVRCEQGEPRLTVKSNELKWLPNGSEFPLV 188

Query: 912  TEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAVKG 733
            +E  ++ S+SK +TYTSFNC QD+LPEF +NPI    D+I+I+KLGPGQEIELEAHAVKG
Sbjct: 189  SESSSRGSSSKPRTYTSFNCSQDSLPEFSNNPI-SAMDNIIISKLGPGQEIELEAHAVKG 247

Query: 732  VGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRATVA 553
            VGKTHAKWSPV TAWYRMLPEVVLL++IED  AE+L  KCPVGVFDIEDIG G+KRA V 
Sbjct: 248  VGKTHAKWSPVGTAWYRMLPEVVLLEEIEDKAAEQLKAKCPVGVFDIEDIGNGKKRAAVV 307

Query: 552  RPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKCER 376
            RPR+CTLCRECIR G +W+  ++LRRVKDHFIFT+ESTGALPPE+LFTEAV+ILE+KCER
Sbjct: 308  RPRACTLCRECIRGGKEWEDRVALRRVKDHFIFTLESTGALPPEVLFTEAVKILEDKCER 367

Query: 375  VISELS 358
            VISELS
Sbjct: 368  VISELS 373