BLASTX nr result
ID: Rehmannia28_contig00006052
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00006052
(310 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011070172.1| PREDICTED: glutamate receptor 2.8-like [Sesa... 84 1e-23
ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotei... 82 7e-23
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 74 1e-20
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 46 4e-10
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 51 7e-10
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 51 7e-10
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 51 7e-10
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 51 7e-10
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 45 3e-09
emb|CDP17738.1| unnamed protein product [Coffea canephora] 46 6e-09
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 48 1e-08
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 48 1e-08
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 48 1e-08
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 48 1e-08
gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposo... 57 2e-08
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 47 2e-08
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 48 2e-08
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 48 2e-08
gb|KYP34487.1| Retrovirus-related Pol polyprotein from transposo... 57 2e-08
gb|KYP34069.1| Retrovirus-related Pol polyprotein from transposo... 52 2e-08
>ref|XP_011070172.1| PREDICTED: glutamate receptor 2.8-like [Sesamum indicum]
Length = 1131
Score = 83.6 bits (205), Expect(2) = 1e-23
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = +2
Query: 152 FDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVI 304
F GY TLKNVR+VPDL +NLISCAALE+DGLEGR+G GLMKI+KGSLV+
Sbjct: 385 FKDGYKMTLKNVRYVPDLSHNLISCAALEEDGLEGRWGKGLMKIMKGSLVV 435
Score = 52.8 bits (125), Expect(2) = 1e-23
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +1
Query: 13 NSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSMXLE 150
NSV+S + +EWLIDS CTFHMSPFK++F+N + FVSM E
Sbjct: 327 NSVNSFDM--HEWLIDSGCTFHMSPFKDIFTNLRYEHAGFVSMANE 370
>ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Sesamum indicum]
Length = 472
Score = 82.0 bits (201), Expect(2) = 7e-23
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
L FD GY LKNVR+VPDL +NLISCAALE++GLEGR+G GLMKI+KGSLV+FK
Sbjct: 347 LCFD-GYKMLLKNVRYVPDLSHNLISCAALEENGLEGRWGKGLMKIMKGSLVVFK 400
Score = 52.0 bits (123), Expect(2) = 7e-23
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSMXLE 150
+EWLIDS CTFHMSPFK++F+N K FVSM E
Sbjct: 299 HEWLIDSGCTFHMSPFKDIFTNLKYEHAGFVSMANE 334
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 74.3 bits (181), Expect(2) = 1e-20
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
LKF SG TLKNVRHVP L +NLISCA LEDDG G +G+G M I+KGS +FK
Sbjct: 63 LKFVSGSVLTLKNVRHVPTLSHNLISCAVLEDDGFRGDWGDGCMNIMKGSRYLFK 117
Score = 52.0 bits (123), Expect(2) = 1e-20
Identities = 23/44 (52%), Positives = 36/44 (81%)
Frame = +1
Query: 10 VNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
VNSV +S+ ENEWL+DSAC++HM+P + +FS+Y ++KN V++
Sbjct: 5 VNSV-LASLSENEWLLDSACSYHMTPRREVFSDYVQMKNCGVTL 47
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 45.8 bits (107), Expect(2) = 4e-10
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 7 IVNSVHSSSVCENEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++ SV S + EW++DS CTFHM P+K+LF+ + V + V M
Sbjct: 273 VMISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLM 317
Score = 45.1 bits (105), Expect(2) = 4e-10
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL NVR +PDL NLIS LE G + G++K+ KG++V+ K
Sbjct: 333 IKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLK 387
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K D G TLKNVR++P + NLIS + L+ +G + +G++K+ KGSLV K
Sbjct: 337 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFV 135
+EW++DSAC+FH+ +N FS+YK V+ V
Sbjct: 288 DEWILDSACSFHICTKRNWFSSYKPVQKGDV 318
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K D G TLKNVR++P + NLIS + L+ +G + +G++K+ KGSLV K
Sbjct: 339 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 393
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFV 135
+EW++DSAC+FH+ +N FS+YK V+ V
Sbjct: 290 DEWILDSACSFHICTKRNWFSSYKPVQKGDV 320
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K D G TLKNVR++P + NLIS + L+ +G + +G++K+ KGSLV K
Sbjct: 337 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFV 135
+EW++DSAC+FH+ +N FS+YK V+ V
Sbjct: 288 DEWILDSACSFHICTKRNWFSSYKPVQKGDV 318
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K D G TLKNVR++P + NLIS + L+ +G + +G++K+ KGSLV K
Sbjct: 337 IKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLK 391
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFV 135
+EW++DSAC+FH+ +N FS+YK V+ V
Sbjct: 288 DEWILDSACSFHICTKRNWFSSYKPVQKGDV 318
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 45.4 bits (106), Expect(2) = 3e-09
Identities = 15/36 (41%), Positives = 29/36 (80%)
Frame = +1
Query: 34 VCENEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
V ++EW++DS C+FH++P+K++F++Y+E V+M
Sbjct: 287 VSKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTM 322
Score = 42.7 bits (99), Expect(2) = 3e-09
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 161 GYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
G TL VRHVP++ NLIS L+++G + G++ +++G+LV+ K
Sbjct: 343 GTVRTLSKVRHVPEMKKNLISLGTLDNNGCKYIAEGGVLNVIRGALVLMK 392
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 45.8 bits (107), Expect(2) = 6e-09
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
L+ G LK+VR+VP+L +LIS LE GLE R +G++K+ G+L++ K
Sbjct: 355 LRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLK 409
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
+EW++DS CT+HM+P + F ++E+ FV M
Sbjct: 307 DEWILDSTCTYHMTPMREWFFEFEELDGGFVYM 339
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 48.1 bits (113), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 178 IKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 232
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLM 162
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 48.1 bits (113), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 178 IKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 232
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLM 162
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 48.1 bits (113), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 346 IKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 400
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLM 330
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 312 IKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMK 366
Score = 38.1 bits (87), Expect(2) = 1e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLM 296
>gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1291
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVI 304
++ SG +TLKNVRH+P L NLIS L+D+G E FG+G K+ KG+L++
Sbjct: 314 IRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKVKKGNLIV 366
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 49 WLIDSACTFHMSPFKNLFSNY 111
W++DS +FH +P L +NY
Sbjct: 268 WIMDSGASFHTTPSNELLTNY 288
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 255 IKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMK 309
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLM 239
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 47.8 bits (112), Expect(2) = 2e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 331 IKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMK 385
Score = 37.7 bits (86), Expect(2) = 2e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLM 315
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 47.8 bits (112), Expect(2) = 2e-08
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVIFK 310
+K G TL +VRH+P+L +LIS L+ G + G+G++K+ KGSLV+ K
Sbjct: 163 IKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMK 217
Score = 37.7 bits (86), Expect(2) = 2e-08
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 43 NEWLIDSACTFHMSPFKNLFSNYKEVKNSFVSM 141
++W++D+ACT+HM P ++ F+ Y+ V+ V M
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLM 147
>gb|KYP34487.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 485
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVI 304
++ SG +TLKNVRH+P L NLIS L+D+G E FG+G K+ KG+L++
Sbjct: 336 IRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKVKKGNLIV 388
Score = 28.5 bits (62), Expect(2) = 2e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 49 WLIDSACTFHMSPFKNLFSNY 111
W++DS +FH +P L +NY
Sbjct: 290 WIMDSGASFHTTPSNELLTNY 310
>gb|KYP34069.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 310
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 146 LKFDSGYAYTLKNVRHVPDLCNNLISCAALEDDGLEGRFGNGLMKILKGSLVI 304
LK + G LK V+H PD+C NLI L+D G + FG+G K+ KG+LV+
Sbjct: 64 LKTNMGMQLFLKGVKHAPDVCFNLIFVQMLDDGGYDNHFGSGKWKLTKGNLVV 116
Score = 33.5 bits (75), Expect(2) = 2e-08
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 40 ENEWLIDSACTFHMSPFKNLFSNY 111
E+ W+IDS T H++P K+LF++Y
Sbjct: 15 ESMWIIDSGATLHVTPRKDLFTSY 38