BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00005502
         (5668 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub...  2833   0.0  
ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I sub...  2594   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  2212   0.0  
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub...  2203   0.0  
ref|XP_015055804.1| PREDICTED: DNA-directed RNA polymerase I sub...  2201   0.0  
emb|CDP10074.1| unnamed protein product [Coffea canephora]           2197   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  2196   0.0  
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...  2126   0.0  
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub...  2117   0.0  
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...  1979   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1956   0.0  
ref|XP_015579396.1| PREDICTED: DNA-directed RNA polymerase I sub...  1838   0.0  
gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, pu...  1833   0.0  
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...  1829   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...  1779   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1765   0.0  
dbj|BAT96398.1| hypothetical protein VIGAN_08333300 [Vigna angul...  1763   0.0  
ref|XP_014513718.1| PREDICTED: DNA-directed RNA polymerase I sub...  1761   0.0  
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...  1752   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1746   0.0  

>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
            indicum]
          Length = 1701

 Score = 2833 bits (7344), Expect = 0.0
 Identities = 1435/1718 (83%), Positives = 1538/1718 (89%), Gaps = 16/1718 (0%)
 Frame = +1

Query: 274  MGTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCK 453
            M +TEVVEAVRFGF+TDEEVRRHS+VKITNPNLLDILEKPIPGGLYDPAMGPLDE+SPCK
Sbjct: 1    MASTEVVEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCK 60

Query: 454  SCGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLE 633
            SCGQRAYHC GHCGHI+LVSPAYNPLLFN LNN+LNKTCF C QFR+SRREV+NCVSQLE
Sbjct: 61   SCGQRAYHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLE 120

Query: 634  LIVKGETVEAKKLGLRQSLLDKKKMEWAL--EIVDLEDNRGSHTSDSTVFSDGENHYE-D 804
            LIVKG+ V AK+L +RQ+L DKK M+W L  +IVD ED++GSHTS S+  S  +NHYE +
Sbjct: 121  LIVKGDIVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQN 180

Query: 805  KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNS 984
             QA WDSSQL EAMSVLNEFLK+KGRKC+NCE  NPK+NKPTFGWFHV+ L++T++RSN+
Sbjct: 181  SQACWDSSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSNA 240

Query: 985  IRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
            IR SRLDV HSGGGE++PSSEVVNASDYSWKDDS TAEANSF+ ASD+ KK SKK   + 
Sbjct: 241  IRRSRLDVAHSGGGEERPSSEVVNASDYSWKDDSETAEANSFIAASDTPKKSSKKGVNQA 300

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSM 1341
            +  NQGLE+ NNYFSGPLLPS+VRDILRRLWENE PLCSY+ DIQQQQCKLSG   GYSM
Sbjct: 301  R--NQGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCKLSGNVAGYSM 358

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFLE+ILVPPIKFRPPAKGGDSVMEHP T+LLGK+LQSNIALGNAHVNNAERSKII+R M
Sbjct: 359  FFLESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWM 418

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQ SINVLFDSKTA SQAQKDGTSGICQ+LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 419  DLQLSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPY 478

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            L+VNEIGIPPYFALRLTYPERVTPWN GKLRGAVINGPEIHPGATTYVDSVSTVKLP+SK
Sbjct: 479  LAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLPSSK 538

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMRVAISRKLPSSRG ++QSG  +ELEFEGK VYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 539  KMRVAISRKLPSSRGLVSQSGKINELEFEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHV 598

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 599  VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD 658

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
            TVRGLIQDHIV AVLLT+KNTFLTRSEFSQLLYGSGVFA GPGSL G  SRKVSLVDSEG
Sbjct: 659  TVRGLIQDHIVGAVLLTLKNTFLTRSEFSQLLYGSGVFAGGPGSLAGKQSRKVSLVDSEG 718

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKNGEED 2601
            LVES+LP+IWKPEPLWTGKQVITALLNHITRG APCTV+NQGK+PKNYFTG SYKNGEED
Sbjct: 719  LVESVLPSIWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFTGSSYKNGEED 778

Query: 2602 EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFTIFLQ 2781
            EDQNAEHNLL+WKNELVRGVIDKAQFGKFGLVHT+QELYGSNSAGILLSALSRLFTIFLQ
Sbjct: 779  EDQNAEHNLLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNSAGILLSALSRLFTIFLQ 838

Query: 2782 IHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQKVIC 2961
            IHGFTCGVDDLIILPHYD QRK+KLEGEDVGEEVHC+FVKFKPGQIG EELQLEI+KVIC
Sbjct: 839  IHGFTCGVDDLIILPHYDVQRKEKLEGEDVGEEVHCDFVKFKPGQIGHEELQLEIEKVIC 898

Query: 2962 SDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 3141
             DRESAT +LDMKMKNKLTN+LTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV
Sbjct: 899  RDRESATGALDMKMKNKLTNRLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 958

Query: 3142 NFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQEYYFH 3321
            NFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFT+RAGGFITDRFLTGLRPQEYYFH
Sbjct: 959  NFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFH 1018

Query: 3322 CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVH 3501
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVH
Sbjct: 1019 CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVH 1078

Query: 3502 QTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKEKQIG 3681
            QTSFLKNFKALEDN+ETI QK++N+RQF+SYI+KLPEGLEEEARRFIQE  D S E Q  
Sbjct: 1079 QTSFLKNFKALEDNQETILQKYRNRRQFDSYIQKLPEGLEEEARRFIQEAGDLSSENQKA 1138

Query: 3682 SAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAAQSVG 3861
            S I+ L+K RK RK        K T K Q+KFIELVKQKYLSSLAQSGEPVGVIAAQS+G
Sbjct: 1139 SGIKHLNKSRKARK--------KVTGKVQDKFIELVKQKYLSSLAQSGEPVGVIAAQSIG 1190

Query: 3862 EPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHEVVSL 4041
            EPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPF QWRSKH+VVSL
Sbjct: 1191 EPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFLQWRSKHDVVSL 1250

Query: 4042 VSRVKKVTVADLVESMDVQLSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLKSVFLREL 4221
            VS VKKVTVADL+ESM+VQLSIH    AR YKL +K+KDTEFV L DI +TLK+VFLREL
Sbjct: 1251 VSNVKKVTVADLIESMEVQLSIHQ---ARIYKLKMKLKDTEFVSLRDIQETLKTVFLREL 1307

Query: 4222 EDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQEA--XXXXXXXXXXXXXX 4395
            EDAIENHVIFLSRVSGIKNFMSSS SE SNEA EDDSG R QE                 
Sbjct: 1308 EDAIENHVIFLSRVSGIKNFMSSSRSEESNEAYEDDSGPRAQEEIDDDDADDDYDKGDDL 1367

Query: 4396 XXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEEAEHSE 4575
               VQKRKQQA+DEM               L     KGKSDGDHLED +  KDEE +  +
Sbjct: 1368 GSDVQKRKQQASDEMDYEDESDVDPGEDEGLG----KGKSDGDHLEDIDTRKDEETDDFD 1423

Query: 4576 DNDGAS---NADEVMSEAKSSGRKGRATSERIEMPKED---SKKIRRGISMEVKGLSFEV 4737
            D D AS   N DEVM+EAKSSG+K RA S+ I+   E+    KKIRR I MEVKGLSFEV
Sbjct: 1424 DKDDASNVQNVDEVMAEAKSSGKKDRAISKGIDKSIEELLSDKKIRRAIYMEVKGLSFEV 1483

Query: 4738 DFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAE 4917
             F FT+EPH+LLAQIAQKTAKKV+IKR+GKISQCK+VQYDPDEKTVIWD+KKKP +GDAE
Sbjct: 1484 HFTFTSEPHVLLAQIAQKTAKKVFIKRTGKISQCKVVQYDPDEKTVIWDNKKKPKKGDAE 1543

Query: 4918 KQ----DDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIRE 5085
            KQ    +D++YWAVKASG DFKS WEM DDLDLSRLYSNNI+AML TYGVEAARAT+IRE
Sbjct: 1544 KQQADGEDSAYWAVKASGEDFKSIWEMQDDLDLSRLYSNNIHAMLKTYGVEAARATLIRE 1603

Query: 5086 VKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 5265
            V QVFDIYGVKID+RHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE
Sbjct: 1604 VTQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 1663

Query: 5266 AATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            AA+H LTDNLETPSSRICLGLPVKMGTGCF+LMQKLD+
Sbjct: 1664 AASHALTDNLETPSSRICLGLPVKMGTGCFDLMQKLDI 1701


>ref|XP_012834350.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Erythranthe
            guttata] gi|604336035|gb|EYU39881.1| hypothetical protein
            MIMGU_mgv1a000122mg [Erythranthe guttata]
          Length = 1719

 Score = 2594 bits (6723), Expect = 0.0
 Identities = 1321/1717 (76%), Positives = 1465/1717 (85%), Gaps = 17/1717 (0%)
 Frame = +1

Query: 280  TTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKSC 459
            TTEVVEAVRFGF TDEE R+HSLVKITNPNL+DIL KP PGGLYDPAMG LDE S C+SC
Sbjct: 7    TTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSICESC 66

Query: 460  GQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLELI 639
            GQRAY C GHCGHI+LVS AYNPLLFN L+NILNKTC  CLQF SS  E +N VSQLELI
Sbjct: 67   GQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQLELI 126

Query: 640  VKGETVEAKKLGLRQSLLDKKKMEWALEIVDL---EDNRGSHTSDSTVFSDGENHY-EDK 807
             KG+   AKKL L  S   KKKM +     D    ED++GSH S S V SDGENH+ +D+
Sbjct: 127  RKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHFKDDE 186

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTE-IRSNS 984
            QA W S+QLAEA+SV+NE+L+RKG+KC NCE   PKI+KPTFGWF V    + + IR N 
Sbjct: 187  QASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAIRENV 246

Query: 985  IRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
            IRS +LD + S GGED  SSEVVNA D+S  DDS T E+NSF+  S+STKK  KK   R 
Sbjct: 247  IRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKGVNRA 306

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSM 1341
            K LN G  D N Y SGPLLPSQVRDIL+ LWE E   CSYI DIQ+Q+CK  G  TGYSM
Sbjct: 307  KKLNPGSGDPNFYLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKPFGNKTGYSM 366

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFLET+LVPPI+FRPPAKGGDSVMEHP T+LLGK+LQSNIALGNAHVN AE+SKIISR M
Sbjct: 367  FFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVN-AEKSKIISRWM 425

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            +LQQSINV FDSKTATS AQKD  +GICQ+LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 426  ELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPY 485

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            L+VNEIGIPPYFAL+LTYPERVTPWN  KLRGAV+NGP+IHPGATTYVDSV+ VKLP S+
Sbjct: 486  LAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSVTIVKLPPSQ 545

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMRVAISRKLPSSRG +TQSG  D+LEFEGK V+RHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 546  KMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIMAHV 605

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVL GE+TLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 606  VRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGD 665

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
            TVRGLIQDHIV AVLLTMKNTF+ RSEF+QLLYGSGVFA GPGSLP N SRKV+L+D+EG
Sbjct: 666  TVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSRKVTLIDTEG 725

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKNGEED 2601
            +VES+LP IWKPEPLWTGKQVITALLNHITRG AP TVENQGKIPKNYF G+SY  GEED
Sbjct: 726  VVESVLPAIWKPEPLWTGKQVITALLNHITRGCAPFTVENQGKIPKNYFFGNSYTRGEED 785

Query: 2602 EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFTIFLQ 2781
            EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYG++SAGI LSALSR+FT+FLQ
Sbjct: 786  EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLSALSRVFTLFLQ 845

Query: 2782 IHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQKVIC 2961
            IHGFTCGVDDLIILP YD QRK+KLEGEDVGE VHC+FVKFKPGQIGP+ELQLEI+KVIC
Sbjct: 846  IHGFTCGVDDLIILPDYDDQRKEKLEGEDVGEVVHCDFVKFKPGQIGPDELQLEIEKVIC 905

Query: 2962 SDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 3141
            +DRESATASLDMKMKNKL +KLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV
Sbjct: 906  TDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 965

Query: 3142 NFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQEYYFH 3321
            NFQQISAYLGQQELEGKRVPRMVSGKTLP FPPWDFTSRAGGFITDRFLTGLRPQEYYFH
Sbjct: 966  NFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGLRPQEYYFH 1025

Query: 3322 CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVH 3501
            CMAGREGLVDTAVKTSRSGYLQRCL+KNLESLKVCYDYTVRDADGSI+QFYYGEDG+DVH
Sbjct: 1026 CMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIVQFYYGEDGIDVH 1085

Query: 3502 QTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKEKQIG 3681
            +TSFL NFKAL+DNRETICQKFQ++R+FNSYI+KLPEGLEEEA+RFIQE Q+KS  KQ  
Sbjct: 1086 RTSFLNNFKALQDNRETICQKFQHKREFNSYIKKLPEGLEEEAKRFIQETQNKSLAKQST 1145

Query: 3682 SAIEQLHKKRKGRKNKHLSNKEKATEK-EQNKFIELVKQKYLSSLAQSGEPVGVIAAQSV 3858
            SA E  H  RK RK + L  KEKA    EQ+ F+ELVKQKYLSSLAQ+GEPVGVIAAQSV
Sbjct: 1146 SAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSSLAQAGEPVGVIAAQSV 1205

Query: 3859 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHEVVS 4038
            GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+AS+VIKTP+LTCPFSQWRSK EVVS
Sbjct: 1206 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPLLTCPFSQWRSKREVVS 1265

Query: 4039 LVSRVKKVTVADLVESMDVQLSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLKSVFLRE 4218
            LVS VKKV+VADL+E+M+VQLS++ +  AR YKL + +KDTEFV L ++H+TLK+ FL E
Sbjct: 1266 LVSHVKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTEFVSLENMHETLKTTFLGE 1325

Query: 4219 LEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQEA---XXXXXXXXXXXX 4389
            LEDAIENHV++LSR+SGIKNF S+   + SNEADED+SG+ T+ A               
Sbjct: 1326 LEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTENAGVNDDDDDDDDDKGD 1385

Query: 4390 XXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEEAEH 4569
                 VQKRKQQATD+M                  D EKGKSD ++LE+ E GKDEE+EH
Sbjct: 1386 DLGSDVQKRKQQATDDMDYEDGSDGGAAEDD--DSDLEKGKSDVENLEEDETGKDEESEH 1443

Query: 4570 SEDNDGASNA---DEVMSEAKSS---GRKGRATSERIEMPKEDSKKIRRGISMEVKGLSF 4731
            ++D D ASN    DE +SE   S     KG+ + ++  +  +  KKIRR   M VKG  F
Sbjct: 1444 TDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELK-GKKIRRAFYMVVKGTKF 1502

Query: 4732 EVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGD 4911
            EV F F  EPH+L+AQ+AQKT+KKVYI++SGK+SQCKMV YDPDEKTVIWD+ KKP RG+
Sbjct: 1503 EVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKKPKRGE 1562

Query: 4912 AE-KQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREV 5088
            ++ +++DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNI+AML TYGVEAARATIIREV
Sbjct: 1563 SKSEEEDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAARATIIREV 1622

Query: 5089 KQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEA 5268
            K VFDIYGVKID+RHLSLIAD+MTHTG Y PMSRHGSISESLSPFLKMSFETASKFIVEA
Sbjct: 1623 KHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFETASKFIVEA 1682

Query: 5269 ATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            A+HGLTD L+TPSSRICLGLPVKMGTG F++MQ+LD+
Sbjct: 1683 ASHGLTDKLDTPSSRICLGLPVKMGTGSFDVMQQLDL 1719


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Solanum
            tuberosum]
          Length = 1675

 Score = 2212 bits (5733), Expect = 0.0
 Identities = 1132/1720 (65%), Positives = 1357/1720 (78%), Gaps = 17/1720 (0%)
 Frame = +1

Query: 271  NMGTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPC 450
            N G +E VEAV F F+TDEEVRRHS+VK+T+PNLLD L+ P+P GLYDPAMGPLD  S C
Sbjct: 2    NQGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQC 61

Query: 451  KSCGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQL 630
            K C Q   +C+GHCGHI+LVSP YNPLLFNML+N+L +TCF C  FR+SR EV+ CVS+L
Sbjct: 62   KFCCQS--NCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSEL 119

Query: 631  ELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYE-DK 807
            ELI KG+ V AK       ++D    +      D E++ GSH S +    + ++H E +K
Sbjct: 120  ELIAKGDVVGAK-------MIDALSPD---NSTDREESEGSHMSCAMDDLNMQDHREYNK 169

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            +  WD+ Q  EAM+V++  LK K  KC NC+  NPKI KP+FG FH++ ++N +IR N I
Sbjct: 170  RPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYI 228

Query: 988  RSSRLDVTH-SGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
             S R    H +GG E+ PS EVVNA++       G AE +  +T++D  +  SK   ++ 
Sbjct: 229  NSGRRFNLHDTGGSEENPSPEVVNATE-----PLGEAETSLCVTSTDGVEN-SKARKRQG 282

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSM 1341
               +  +E Q + FS   LPSQVR I+  LWENE PLC++  DIQ Q    SGK  G SM
Sbjct: 283  GDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSM 342

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFL++ILVPPIKFRPPAKGGDS+MEHPHT+LLGK++Q+NIALGNAH+N A RSKIISRLM
Sbjct: 343  FFLDSILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLM 402

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQQS+NVLFDSKTA+   QKD  SGICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 403  DLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPY 462

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            LSVNEIGIPPYFALRLTYPER+TPWN  K+R AVINGPE HPGA ++ D ++TVKLP++K
Sbjct: 463  LSVNEIGIPPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNK 522

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMRVAISRKLPSSRGA+TQSG N+E EFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHV
Sbjct: 523  KMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHV 582

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 583  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGD 642

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
            TVRGLIQDHIV AV+LTMKNTFLT  EF+QLLYGSGVFA GP    GN S KVS+VD EG
Sbjct: 643  TVRGLIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEG 702

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDS----YKN 2589
            +V+++LP +WKP+PLWTGKQVITALLNH+T+G APCTV+N+GKIP  YF  +S    Y++
Sbjct: 703  VVQTVLPAVWKPKPLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQS 762

Query: 2590 GEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFT 2769
             EE ED+ AE+  L+WKNELVRGVIDKAQFGKFGLVHT+QELYGSN AGILLSALSRLFT
Sbjct: 763  REEQEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFT 822

Query: 2770 IFLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQ 2949
            IFLQ+HGFTCGVDDL+ILPHYD +RK++LEG+DVGEE HC+FVKFK G+IGP ELQLEI+
Sbjct: 823  IFLQLHGFTCGVDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIE 882

Query: 2950 KVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAK 3129
            K + S++E+ATA+LDMKMKNKL NK    GSQ  K LL  GLLKPFP+NCI++MT TGAK
Sbjct: 883  KAMSSNKEAATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALMTITGAK 938

Query: 3130 GSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQE 3309
            GSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFPPWD  SRAGG+++DRFL+GLRPQE
Sbjct: 939  GSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQE 998

Query: 3310 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 3489
            YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG
Sbjct: 999  YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 1058

Query: 3490 VDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKE 3669
            VDVH+TSFLKNFKAL++N+ETICQK ++ R+ NSYIEKLP+GLEE+ + F  E + K  E
Sbjct: 1059 VDVHRTSFLKNFKALKNNQETICQKLRHGRKLNSYIEKLPDGLEEKVKHF-WEKRTKKLE 1117

Query: 3670 KQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAA 3849
            K++G  +++                 K  ++E+  F+ELV+QKY SSLA SGEPVGV+A 
Sbjct: 1118 KKLGKLVKK-------------EEMVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAG 1164

Query: 3850 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHE 4029
            QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ IKTPILTCPF  W+SK++
Sbjct: 1165 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKND 1224

Query: 4030 VVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLK 4200
              SL+++VKK+TVAD++ESM+V+   LSI+  QV++ YKL +K+K  +FV   D   TLK
Sbjct: 1225 AQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLK 1284

Query: 4201 SVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQEAXXXXXXXXX 4380
             VFLRELEDAIE+H+  LS+++GI+NF +SS S  S+E +E+ S  R +E          
Sbjct: 1285 FVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRHEEEMLDDEDEDE 1344

Query: 4381 XXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEE 4560
                     QKRKQQ TDEM                 ED +  ++D     + +NG +EE
Sbjct: 1345 RTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTD-----EIDNGDEEE 1399

Query: 4561 AEHSEDNDGAS---NADEVMSEAKSSGRKGRATSERIEMPKEDSKKIR----RGISMEVK 4719
              +  + +  S   + ++ +S  KSS  K + T   ++  K+  ++ +    R + ++V+
Sbjct: 1400 IGNRGNEEQMSKLQSTEDDISNTKSSKSKTK-TKTTVKQNKKKERRSKKDSDRCVFVDVE 1458

Query: 4720 GLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKP 4899
            GL FEV FRF  EPH+LLAQ+AQKTAKKVYIK SGKI QC+MV+Y+  E TV+WD+ +  
Sbjct: 1459 GLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTK 1518

Query: 4900 NRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATII 5079
             +    +  D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI AMLNTYGVEAARA+I+
Sbjct: 1519 QQ---SQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASIL 1575

Query: 5080 REVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFI 5259
            REVK VF IYGV+IDFRHLSLIAD+MTHTGGY+PMSRHGSISESLSPFLKMSFETASKFI
Sbjct: 1576 REVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFI 1635

Query: 5260 VEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            VEAA HGLTDNLETPSSRICLGLPVKMGTGCF++MQKLD+
Sbjct: 1636 VEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1675


>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            sylvestris]
          Length = 1681

 Score = 2203 bits (5708), Expect = 0.0
 Identities = 1135/1727 (65%), Positives = 1340/1727 (77%), Gaps = 26/1727 (1%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G +E VEAV F F+TDEEVR+HS+VK+T+PNLLD L  P+PGGLYDPAMGPL E S CKS
Sbjct: 4    GASEAVEAVHFSFMTDEEVRKHSVVKVTSPNLLDTLGGPLPGGLYDPAMGPLSERSQCKS 63

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQ   HC GHCGHI+LVSP +NPLLFNML+N+L +TCF C  FR+S+ EV+ CVS+LEL
Sbjct: 64   CGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFYCFHFRASKEEVEKCVSELEL 123

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSH---TSDSTVFSDGENHYEDK 807
            I KG+ +  K + +     D           D E++ GSH   T+D     D   +  +K
Sbjct: 124  IAKGDVIGPKTMDVLSP--DNS--------ADREESEGSHMSCTTDDLKLQDRSEY--NK 171

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            +  WD+ Q  EAM+V++  LK K  KC NCE  NPKINKP+FG FH++ +++ +I  N I
Sbjct: 172  RPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMD-ISSKQIIFNYI 230

Query: 988  RSSRL-DVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
            + S++ ++  +GG E+  S EVVNA++       G AE +  + +SD  +    +     
Sbjct: 231  KKSQMFNLQRTGGSEENLSPEVVNATE-----PLGEAETSLSMASSDRLENSMARG---- 281

Query: 1165 KILNQGLED-----QNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKA 1326
                QG E+     Q + FS   LPSQVR I+  LWENE  LC++  +IQ Q      K 
Sbjct: 282  ---RQGDEEYIVMQQKDLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHLNTPSKV 338

Query: 1327 TGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKI 1506
             G SMFFL++ILVPPI+FRPPAKGGDSVMEHPHT+LLGK+LQSNIALGNAH N A RSKI
Sbjct: 339  AGPSMFFLDSILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNRAGRSKI 398

Query: 1507 ISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVI 1686
            ISRLMDLQQS+N+LFDSKTA    QKD   GICQ LEKKEGIFRQKMMGKRVNFACRSVI
Sbjct: 399  ISRLMDLQQSVNILFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVI 458

Query: 1687 SPDPYLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVK 1866
            SPDPYLSVNEIG+PPYFALRLTYPERVTPWN GK+R ++INGPE HPGA ++ D +STVK
Sbjct: 459  SPDPYLSVNEIGVPPYFALRLTYPERVTPWNAGKMRDSIINGPENHPGALSFADRISTVK 518

Query: 1867 LPAS-----KKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPT 2031
            LP+      KK+R+AISRKLPSSRGA+TQSG NDE EFEGK+VYRHLQDGDIVLVNRQPT
Sbjct: 519  LPSGNGKNIKKIRMAISRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPT 578

Query: 2032 LHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNAN 2211
            LHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN
Sbjct: 579  LHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 638

Query: 2212 EQYIVPTRGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLS 2391
            EQYIVPT+GDTVRGLIQDHIV AVLLTMKNTFLT  EF+QLLYGSGVFA GPGS  GN S
Sbjct: 639  EQYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHS 698

Query: 2392 RKVSLVDSEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFT 2571
             KVS+VDSEG+V+++LP +WKP+PLWTGKQVITALLNH+T+G  PCTV+N+GKIP  YF 
Sbjct: 699  NKVSVVDSEGVVQTILPAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYPYFL 758

Query: 2572 GDS----YKNGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGI 2739
              S    Y++ EE+ED+ AE+  L+WKNELVRGVIDKAQFGKFGLVHT+QELYG+N AGI
Sbjct: 759  SQSRLAEYQSREEEEDRTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGANRAGI 818

Query: 2740 LLSALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQI 2919
            LLSALSRLFTIFLQ+HGFTCG+DDL+ILPHYD +RK++LEG DVGE+ HC+FVKFKPG+I
Sbjct: 819  LLSALSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGGDVGEDAHCDFVKFKPGEI 878

Query: 2920 GPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNC 3099
            GP ELQLEI+K I  ++E+ATA+LDMKMKNKL NK    GSQ  K LL  GLLKPFP+NC
Sbjct: 879  GPLELQLEIEKAISGNKEAATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNC 934

Query: 3100 ISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITD 3279
            I++MT TGAKGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFPPWDF SRAGG+++D
Sbjct: 935  IALMTITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSD 994

Query: 3280 RFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS 3459
            RFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS
Sbjct: 995  RFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS 1054

Query: 3460 IIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRF 3639
            IIQFYYGEDGVDVH+TSFLKNFKAL+DN+ETICQK +  R+ NSYIE+LP+GLEE+ ++F
Sbjct: 1055 IIQFYYGEDGVDVHRTSFLKNFKALKDNQETICQKLRQGRKLNSYIERLPDGLEEKVKQF 1114

Query: 3640 IQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQ 3819
                         G   ++L KK + R  K   +K+   +KE+  F+ELV QKY SSLA 
Sbjct: 1115 ------------WGKKTKKLEKKLEKRVKKEEISKQ--LKKEEVDFLELVGQKYFSSLAD 1160

Query: 3820 SGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTC 3999
            SGEPVGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASD IKTPI+TC
Sbjct: 1161 SGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDAIKTPIMTC 1220

Query: 4000 PFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFV 4170
            PF  W+SK +  SL++ VKK+TVAD++ESM+V    LSI+  QV++ YKL +K+K+ EFV
Sbjct: 1221 PFLGWKSKDDAQSLLAEVKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFV 1280

Query: 4171 PLADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQE 4350
               D   TLK VFLRELEDAIE+H+  LS+++GIKNF SSS S  S+E +E+ S  R +E
Sbjct: 1281 SSEDCDYTLKYVFLRELEDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRYEE 1340

Query: 4351 ---AXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDG 4521
                                  QKRKQQ TDEM                +E  E  KSD 
Sbjct: 1341 HMLDDDDEAEDERTEEDLSSDAQKRKQQTTDEMDYDDGPEDEASEAETTAE-VEDEKSDQ 1399

Query: 4522 DHLEDTENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKK-IRR 4698
             H  +  N  +EE     + +  S      S  K++  K + T ++ +  +  SKK   R
Sbjct: 1400 AH--EIGNRDEEETGDHGNEEQTSKLYSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDR 1457

Query: 4699 GISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVI 4878
             + + V+GL FEV FRF  EPH+LLAQ+AQKTAKKVYIK +GKI QC+MV+YD  E TV+
Sbjct: 1458 SVFIAVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIDQCRMVKYDVSENTVM 1517

Query: 4879 WDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVE 5058
            WD+K+  N+    +  D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI +MLNTYGVE
Sbjct: 1518 WDEKQTKNQ---SQDTDSAYWALKAAGVDFGTFWEMQDDLDVNRIYTNNIRSMLNTYGVE 1574

Query: 5059 AARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSF 5238
            AARA IIREVK VF IYGV+IDFRHLSLIADYMTHTGGY+PMSRHGSISESLSPFLKMSF
Sbjct: 1575 AARAAIIREVKTVFGIYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSF 1634

Query: 5239 ETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            ETASKFIVEAA+HGLTDNLETPSSRICLGLPVKMGTGCF++MQKLD+
Sbjct: 1635 ETASKFIVEAASHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1681


>ref|XP_015055804.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Solanum
            pennellii]
          Length = 1675

 Score = 2201 bits (5702), Expect = 0.0
 Identities = 1129/1718 (65%), Positives = 1349/1718 (78%), Gaps = 15/1718 (0%)
 Frame = +1

Query: 271  NMGTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPC 450
            N G +E VEAV F F+TDEEVRRHS+VK+T+PNLLD L+ P+P GLYDPAMGPLD  S C
Sbjct: 2    NQGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQC 61

Query: 451  KSCGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQL 630
            K C Q   +C+GHCGHI+LVSP YNPLLFNML+N+L +TCF C  FR+SR EV+ CVS+L
Sbjct: 62   KFCSQS--NCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSEL 119

Query: 631  ELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYE-DK 807
            ELI KG+ V AK       ++D    +      D E++ GSH S +    +  +H E +K
Sbjct: 120  ELIAKGDVVGAK-------MIDALSPD---NSTDREESEGSHMSCTMDDLNVRDHCEYNK 169

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            +  WD+ Q  EAM+V++  LK K  KC NC+  NPKI KP+FG FH++ ++N +IR N I
Sbjct: 170  RPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYI 228

Query: 988  RSSRLDVTH-SGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
             S R    H +GG E+ PS EVVNA++       G AE +  +T++D  +  SK   ++ 
Sbjct: 229  NSGRRFNLHDTGGSEENPSPEVVNATE-----PLGEAETSLCVTSTDGVEN-SKGRKRQG 282

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSM 1341
               +  +E Q + FS   LPSQVR I+  LWENE PLC++  D Q Q    SGK  G SM
Sbjct: 283  GDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDFQSQHRNTSGKVAGPSM 342

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFL++ILVPP+KFRPPAKGGDS+MEHPHT+LLGK++Q+NIALGNAH+N A RSKIISRLM
Sbjct: 343  FFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLM 402

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQQS+NVLFDSKTA+   QKD  SGICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 403  DLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPY 462

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            LSVNEIGIPPYFA RLTYPER+TPWN  K+R AVINGPE HPGA ++ D ++TVKLP++K
Sbjct: 463  LSVNEIGIPPYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNK 522

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMRVAISRKLPSSRGA+TQSG N+E EFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHV
Sbjct: 523  KMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHV 582

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 583  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGD 642

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
            TVRGLIQDHIV AV+LTMKNTFLT  EF+QLLYGSGVFA GP    GN S KVS+VD EG
Sbjct: 643  TVRGLIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEG 702

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDS----YKN 2589
            +V+++LP +WKP+PLWTGKQVITALLNH+T G  PCTV+N+GKIP  YF  +S    Y++
Sbjct: 703  VVQTVLPAVWKPKPLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSESRLVEYQS 762

Query: 2590 GEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFT 2769
             EE ED+ AE+  L+WKNELVRGVIDKAQFGKFGLVHT+QELYGSN AGILLSALSRLFT
Sbjct: 763  REEQEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFT 822

Query: 2770 IFLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQ 2949
            IFLQ+HGFTCG+DDL+ILPHYD +RK++LEG+DVGEE HC+FVKFK G+IGP ELQLEI+
Sbjct: 823  IFLQLHGFTCGIDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPSELQLEIE 882

Query: 2950 KVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAK 3129
            K I S++E ATA+LDMKMKNKL NK    GSQ  K LL  GLLKPFP+NCI++MT TGAK
Sbjct: 883  KAISSNKEVATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALMTITGAK 938

Query: 3130 GSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQE 3309
            GSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFP WD  SRAGG+++DRFL+GLRPQE
Sbjct: 939  GSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQE 998

Query: 3310 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 3489
            YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG
Sbjct: 999  YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 1058

Query: 3490 VDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKE 3669
            VDVH+TSFLKNFKAL++N+ETICQK ++ R+ NSYIEKLP+GL E+ + F  E + K  E
Sbjct: 1059 VDVHRTSFLKNFKALKNNQETICQKLRHGRKLNSYIEKLPDGLGEKVKHF-WESKTKKLE 1117

Query: 3670 KQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAA 3849
            K++G  +++                 K  ++E+  F+ELV QKY SSLA SGEPVGV+A 
Sbjct: 1118 KKLGKLVKK-------------EEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAG 1164

Query: 3850 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHE 4029
            QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ IKTPI+TCPF  W+SK++
Sbjct: 1165 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKND 1224

Query: 4030 VVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLK 4200
              SL+++VKK+TVAD++ESM+V+   LSI+  QV++ YKL +K+K  +FV   D   TLK
Sbjct: 1225 AQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLK 1284

Query: 4201 SVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQE--AXXXXXXX 4374
             VFLRELEDAIE+H+  LS+++GI+NF +SS S  S+E +E+ S  R +E          
Sbjct: 1285 FVFLRELEDAIESHLSLLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDDDDEDE 1344

Query: 4375 XXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDG-DHLEDTENGK 4551
                       QKRKQQ TDEM                 ED +  ++D  D+ ++ +NG 
Sbjct: 1345 DERTEDLSSDAQKRKQQTTDEMDYDDDEDEDEAEATAEIEDEKSEQTDEIDNGDEEDNGD 1404

Query: 4552 DEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKK-IRRGISMEVKGLS 4728
                EH+       + +E +S  K+S  K + T ++ +  +  SKK   R + ++V+GL 
Sbjct: 1405 RGNEEHTSK---LQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLH 1461

Query: 4729 FEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRG 4908
            FEV FRF  EPH+LLAQ+AQKTAKKVY+K SGKI QC+MV+Y+  E TV+WD+    N+ 
Sbjct: 1462 FEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDE----NQT 1517

Query: 4909 DAEKQD-DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIRE 5085
              + QD D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI AMLNTYGVEAARA+I+RE
Sbjct: 1518 KQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILRE 1577

Query: 5086 VKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 5265
            VK VF IYGV+IDFRHLSLIAD+MTHTGGY+PMSRHGSISESLSPFLKMSFETASKFIVE
Sbjct: 1578 VKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVE 1637

Query: 5266 AATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            AA HGLTDNLETPSSRICLGLPVKMGTGCF++MQKLD+
Sbjct: 1638 AAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1675


>emb|CDP10074.1| unnamed protein product [Coffea canephora]
          Length = 1680

 Score = 2197 bits (5692), Expect = 0.0
 Identities = 1132/1726 (65%), Positives = 1334/1726 (77%), Gaps = 26/1726 (1%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G +E VE V F F+T EEVR+HS+VKI NP LLD + +P+PGGLYDPAMGP DE SPCKS
Sbjct: 8    GASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFDEQSPCKS 67

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR++HCTGHCGHI+LVSPAYNPLLFNML N+L +TCF C  FRSS  EVD CV QLE 
Sbjct: 68   CGQRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDKCVLQLER 127

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQAF 816
            I KG+ + AK+L    S           ++ + ED+ GSH S   V+   E H   KQ  
Sbjct: 128  IAKGDVIGAKRLDAASSA----------DLDNSEDSEGSHVSCGNVYHGAEEHM--KQPS 175

Query: 817  WDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSS 996
            WDS Q  EAMSVLN FLK K  KC  CE  NPKI KPTFGWFH+  ++N E R+N IR  
Sbjct: 176  WDSFQFTEAMSVLNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMV-VSNAETRANIIRGH 234

Query: 997  RLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKP-SKKDAKRIKIL 1173
            RLD   SGG E++ SSEVVNA+D  W+DDS T +  S+ T SD    P +KK   +   +
Sbjct: 235  RLDGFRSGGSEERSSSEVVNANDSLWEDDSQTGKTASY-TVSDGIDTPVAKKSPNQPGRV 293

Query: 1174 NQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSMFFL 1350
             + L+ Q   FS  LLPS+VRD+++RLWENE PLCS+I D+Q++Q   +    GYSMFFL
Sbjct: 294  GEELKKQKEAFSEHLLPSEVRDVVKRLWENEAPLCSFICDLQREQHNSAAGIAGYSMFFL 353

Query: 1351 ETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQ 1530
            ++ILVPPIKFRP A+ GD+VMEHPHT LL K+LQSNIALGNA++NNAER KI++R MDLQ
Sbjct: 354  DSILVPPIKFRPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAERYKIVNRWMDLQ 413

Query: 1531 QSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSV 1710
            QSI+VL+DSKT T Q+QK G  GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+V
Sbjct: 414  QSISVLYDSKTTTGQSQKAGPVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 473

Query: 1711 NEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASKKMR 1890
            NEIG+PPYFALRLTYPERVTPWNVGKLRGA++NGPEIHPGA +Y D VSTVKLP+SKKMR
Sbjct: 474  NEIGVPPYFALRLTYPERVTPWNVGKLRGAIVNGPEIHPGALSYTDKVSTVKLPSSKKMR 533

Query: 1891 VAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 2070
            +AISRKLPSSRG +TQ G N E EFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRV
Sbjct: 534  IAISRKLPSSRGVVTQLGKNSEHEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRV 593

Query: 2071 LKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVR 2250
            LKGEKTLRMHYANCSSYNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVR
Sbjct: 594  LKGEKTLRMHYANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVR 653

Query: 2251 GLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEGLVE 2430
            GLIQDHI SAVLLTMK+TFLT  EF+QLLYGSGVF  G      N S K+S+VDSEG+++
Sbjct: 654  GLIQDHIGSAVLLTMKDTFLTYDEFNQLLYGSGVFTTGSSCTFSNYSGKISIVDSEGIIQ 713

Query: 2431 SLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYK------NG 2592
             +LP + KP+PLWTGKQVITALLN +T+G APC++E + KIPK YF  ++Y+      + 
Sbjct: 714  PILPAVLKPKPLWTGKQVITALLNQLTKGCAPCSIEKEMKIPKQYFPTETYEVQQSENDD 773

Query: 2593 EEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFTI 2772
            +E++++ A++ LLVWKNELVRGVIDKAQFG+FGLVH++QELYG+N+AG+LLSALSRLFT+
Sbjct: 774  KENDEKKADNCLLVWKNELVRGVIDKAQFGQFGLVHSIQELYGANTAGLLLSALSRLFTM 833

Query: 2773 FLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQK 2952
            FLQ+HGFTCGV+DLIILPH+D +RK++LEGEDVGE+VHCEFV FK GQIGP ELQLEI+K
Sbjct: 834  FLQMHGFTCGVEDLIILPHFDLRRKEELEGEDVGEDVHCEFVNFKRGQIGPLELQLEIEK 893

Query: 2953 VICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKG 3132
            VIC DRE+ATASLDMKMKNKLT K     SQI K LL  GLLKPFPKNCIS+MT +GAKG
Sbjct: 894  VICRDREAATASLDMKMKNKLTKK----ASQISKELLLKGLLKPFPKNCISLMTISGAKG 949

Query: 3133 STVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQEY 3312
            STVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGG+ITDRFL+GLRPQEY
Sbjct: 950  STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGYITDRFLSGLRPQEY 1009

Query: 3313 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGV 3492
            YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSI+QFYYGEDGV
Sbjct: 1010 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIVQFYYGEDGV 1069

Query: 3493 DVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKEK 3672
            DVH+TSFLKN +AL  N+  + QK++ +R FN+YI +LP+GL+ +A  F++ V   S   
Sbjct: 1070 DVHRTSFLKNLRALALNQVPVRQKYERERDFNAYIVELPDGLKRKAEGFLKGVNTDS--- 1126

Query: 3673 QIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAAQ 3852
                               H+             F+ L+ QKYLSSLA SGEPVGVIAAQ
Sbjct: 1127 -------------------HMD------------FMTLLAQKYLSSLAPSGEPVGVIAAQ 1155

Query: 3853 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHEV 4032
            SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ VIKTP++TCPF Q++S  + 
Sbjct: 1156 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAQVIKTPVMTCPFLQFKSMDDA 1215

Query: 4033 VSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYKLIIKVKDTEFVPLADIHDTLKS 4203
             SLV++VKK+TVAD++ESM+V L   S+    +   YKL++  K  EF    D  +TL+ 
Sbjct: 1216 KSLVAKVKKITVADIIESMEVHLLPLSVLNNGIGIIYKLMMTFKHHEFASSEDCKETLRH 1275

Query: 4204 VFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQEAXXXXXXXXXX 4383
             FLRELEDAI+NH++ LSR+SGIKN MS++ S+  NE DED SGV + E           
Sbjct: 1276 SFLRELEDAIQNHLVLLSRISGIKNIMSNTRSK-GNETDEDASGVTSHEEGDDENDDGDG 1334

Query: 4384 XXXXXXXV-------QKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTE 4542
                           QKRKQQATDEM                 +DG+   +D   + + +
Sbjct: 1335 GKGNDDMAEDLGSDAQKRKQQATDEMDYEDITEDESTADHEQGKDGQS--NDEGEIREGK 1392

Query: 4543 NGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKED--SKKIRRGISMEV 4716
               D + EH+ + +   + +E MS+ KS  + G++T ++ +  ++    K+  R I +EV
Sbjct: 1393 EAMDVDDEHAIEME---HDNEEMSKPKSGNKNGKSTLKKRKKAEKKFVRKETDRNIFVEV 1449

Query: 4717 KGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKK 4896
            +G  FE  F FT EPH+LLAQIAQKTAK VYIK SGKI+QCKMV++D  E TVIWD KK 
Sbjct: 1450 EGQKFEAHFGFTNEPHILLAQIAQKTAKHVYIKSSGKINQCKMVEHDVSENTVIWDAKKV 1509

Query: 4897 PNRGDAEKQ------DDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVE 5058
              +  A+KQ      D   YWA+KA+GVDF  FWEM DDLD +R+YSN+I+AML TYGVE
Sbjct: 1510 DKKIKAKKQMKANVDDLLPYWALKAAGVDFIPFWEMQDDLDTARIYSNSIHAMLETYGVE 1569

Query: 5059 AARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSF 5238
            AARATIIREV  VF IYGV+ID+RHLSLIADYMTH+GGYRPMSRHGSI+ESLSP  KMSF
Sbjct: 1570 AARATIIREVTNVFGIYGVQIDYRHLSLIADYMTHSGGYRPMSRHGSIAESLSPLAKMSF 1629

Query: 5239 ETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLD 5376
            ETA KFIVEAA+HG+TDNLETPSSRICLGLPVKMGTGCF+LMQ+LD
Sbjct: 1630 ETAGKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQQLD 1675


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum
            lycopersicum]
          Length = 1677

 Score = 2196 bits (5689), Expect = 0.0
 Identities = 1122/1717 (65%), Positives = 1348/1717 (78%), Gaps = 14/1717 (0%)
 Frame = +1

Query: 271  NMGTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPC 450
            N G +E VEAV F F+TDEEVRRHS+VK+T+PNLLD L+ P+P GLYDPAMGPLD  S C
Sbjct: 2    NQGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQC 61

Query: 451  KSCGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQL 630
            K C Q   +C+GHCGHI+LVSP YNPLLFNML+N+L +TCF C  FR+SR EV+ CVS+L
Sbjct: 62   KFCSQS--NCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSEL 119

Query: 631  ELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYE-DK 807
            ELI KG+ V AK       ++D    +      D E++ GSH S +    +  +H E +K
Sbjct: 120  ELIAKGDVVGAK-------MIDALSPD---NSTDREESEGSHMSCTMDDLNVRDHCEYNK 169

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            +  WD+ Q  EAM+V++  LK K  KC NC+  NPKI KP+FG FH++ ++N +IR N I
Sbjct: 170  RPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYI 228

Query: 988  RSSRLDVTH-SGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
             S R    H +GG E+ PS EVVNA++       G AE +  +T++D  +  SK   ++ 
Sbjct: 229  NSGRRFNLHDTGGSEENPSPEVVNATE-----PLGEAETSLCVTSTDGVEN-SKGRKRQG 282

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGYSM 1341
               +  +E Q + FS   LPSQVR I+  LWENE PLC++  DIQ Q    SGK  G SM
Sbjct: 283  GDQSDVVEQQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSM 342

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFL++ILVPP+KFRPPAKGGDS+MEHPHT+LLGK++Q+NIALGNAH+N A RSKIISRLM
Sbjct: 343  FFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLM 402

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQQS+NVLFDSKTA+   QKD  SGICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 403  DLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPY 462

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            LSVNEIGIPPYFA RLTYPER+TPWN  K+R AVINGPE HPGA ++ D ++TVKLP++K
Sbjct: 463  LSVNEIGIPPYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNK 522

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMRVAISRKLPSSRGA+TQSG N+E EFEGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHV
Sbjct: 523  KMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHV 582

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYIVPT+GD
Sbjct: 583  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGD 642

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
            TVRGLIQDHIV AV+LTMKNTFL+  EF+QLLYGSGVFA GP    GN S KVS+VD EG
Sbjct: 643  TVRGLIQDHIVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEG 702

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDS----YKN 2589
            +V+++LP +WKP+PLWTGKQVITALLNH+T G  PCTV+N+GKIP  YF  +S    Y++
Sbjct: 703  VVQTVLPAVWKPKPLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSESRLVEYQS 762

Query: 2590 GEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFT 2769
             EE ED+ AE+  L+WKNELVRGVIDKAQFGKFGLVHT+QELYGSN AGILLSALSRLFT
Sbjct: 763  REEQEDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFT 822

Query: 2770 IFLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQ 2949
            IFLQ+HGFTCG+DDL+ILPHYD +RK++LEG+DVGEE HC+FVKFK G+IGP ELQLEI+
Sbjct: 823  IFLQLHGFTCGIDDLVILPHYDIRRKEELEGDDVGEEAHCDFVKFKRGEIGPLELQLEIE 882

Query: 2950 KVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAK 3129
            K I S++E ATA+LDMKMKNKL NK    GSQ  K LL  GLLKPFP+NCI++MT TGAK
Sbjct: 883  KAISSNKEVATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALMTITGAK 938

Query: 3130 GSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQE 3309
            GSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFP WD  SRAGG+++DRFL+GLRPQE
Sbjct: 939  GSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQE 998

Query: 3310 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 3489
            YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG
Sbjct: 999  YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDG 1058

Query: 3490 VDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKE 3669
            VDVH+TSFLKNFKAL++N+ETICQK ++  + NSYIEKLP+GL E+ + F  E + K  E
Sbjct: 1059 VDVHRTSFLKNFKALKNNQETICQKLRHGCKLNSYIEKLPDGLGEKVKHF-WESKTKKLE 1117

Query: 3670 KQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAA 3849
            K++G  +++                 K  ++E+  F+ELV QKY SSLA SGEPVGV+A 
Sbjct: 1118 KKLGMLVKK-------------EEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAG 1164

Query: 3850 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHE 4029
            QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS+ IKTPI+TCPF  W+SK++
Sbjct: 1165 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKND 1224

Query: 4030 VVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLK 4200
              SL+++VKK+TVAD++ESM+V+   LSI+  QV++ YKL +K+K  +FV   D   TLK
Sbjct: 1225 AQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDFVSSEDCEYTLK 1284

Query: 4201 SVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQE--AXXXXXXX 4374
             VFLRELEDAIE+H+  LS+++GI+NF +SS S  S+E +E+ S  R +E          
Sbjct: 1285 FVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDDDDDDE 1344

Query: 4375 XXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKD 4554
                       QKRKQQ TDEM                +E  ++     D +++ +  ++
Sbjct: 1345 DERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEEN 1404

Query: 4555 EEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKK-IRRGISMEVKGLSF 4731
             +  + E      + +E +S  K+S  K + T ++ +  +  SKK   R + ++V+GL F
Sbjct: 1405 GDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHF 1464

Query: 4732 EVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGD 4911
            EV FRF  EPH+LLAQ+AQKTAKKVY+K SGKI QC+MV+Y+  E TV+WD+    N+  
Sbjct: 1465 EVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDE----NQTK 1520

Query: 4912 AEKQD-DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREV 5088
             ++QD D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI AMLNTYGVEAARA+I+REV
Sbjct: 1521 QQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREV 1580

Query: 5089 KQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEA 5268
            K VF IYGV+IDFRHLSLIAD+MTHTGGY+PMSRHGSISESLSPFLKMSFETASKFIVEA
Sbjct: 1581 KTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEA 1640

Query: 5269 ATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            A HGLTDNLETPSSRICLGLPVKMGTGCF++MQ+LD+
Sbjct: 1641 AAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQELDI 1677


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score = 2126 bits (5509), Expect = 0.0
 Identities = 1119/1707 (65%), Positives = 1303/1707 (76%), Gaps = 16/1707 (0%)
 Frame = +1

Query: 292  VEAVRFGFLTDEEVRRHSLVKITNPNLLDI-LEKPIPGGLYDPAMGPLDESSPCKSCGQR 468
            VEAVRFGF++DEEVR+HS+V ITN  L+D   +KP PGGLYDPA+GPL +SS C SCGQR
Sbjct: 4    VEAVRFGFMSDEEVRKHSVVGITNLKLVDDDTDKPFPGGLYDPALGPLGDSSKCLSCGQR 63

Query: 469  AYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLELIVKG 648
            +YHC GH GHIDLV P YNPL F  L NILN  CF C  F+  R EV+ CVSQL LI KG
Sbjct: 64   SYHCPGHFGHIDLVFPVYNPLSFKFLRNILNTACFSCRHFKVGRLEVETCVSQLHLIRKG 123

Query: 649  ETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQA-FWDS 825
            +   A++L                 +  L DN+GSH++ S V S+ E+  +      WDS
Sbjct: 124  DIAGARRLR---------------SLGGLSDNQGSHSTGSVVLSESESGQDLNWCRSWDS 168

Query: 826  SQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRLD 1005
             QL EAM VLNEF ++K +KC+NCE  +PKI  P FGWF+            +I  S   
Sbjct: 169  IQLTEAMGVLNEFFRKKEKKCKNCESRSPKITNPIFGWFYA---------VYAIHRSSSK 219

Query: 1006 VTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKILNQGL 1185
             TH   G+DKPS E               +EA+S + ++DS     KK +   K LN GL
Sbjct: 220  GTHIREGKDKPSPE--------------NSEASSSIISADSPGNSGKKGSSSNK-LNLGL 264

Query: 1186 EDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFLETIL 1362
              Q +     LLPS+VR+++ +LWENE  LCS+I DIQQQQ KLSG    YS+FF ETIL
Sbjct: 265  VGQRH-----LLPSEVREMVMQLWENEESLCSFICDIQQQQGKLSGNRMDYSIFFFETIL 319

Query: 1363 VPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQQSIN 1542
            V PIKFR P +GG+SVMEHPHT+LLGK+L+SNIAL      NA+ SK IS  M+LQQSIN
Sbjct: 320  VNPIKFRAPTRGGNSVMEHPHTVLLGKVLESNIAL-----RNAQPSKFISHWMELQQSIN 374

Query: 1543 VLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIG 1722
            VLFD K++TS+  K G SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIG
Sbjct: 375  VLFDGKSSTSK--KAGVSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIG 432

Query: 1723 IPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASKKMRVAIS 1902
            IPPYFALRLTYPERVTPWN  KLR AV+NGP+IHPGATTY+DSV+T+KLP +KK RVA+S
Sbjct: 433  IPPYFALRLTYPERVTPWNATKLRNAVVNGPDIHPGATTYIDSVATMKLPLNKKARVALS 492

Query: 1903 RKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 2082
            RKLPSSRGA  + G + +L+FEGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE
Sbjct: 493  RKLPSSRGATAEVGES-QLDFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE 551

Query: 2083 KTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQ 2262
            +TLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQ
Sbjct: 552  RTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQ 611

Query: 2263 DHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEGLVESLLP 2442
            DHIV+AVLLT+K TFLT SEF+QLLYGSGVFA G  S   N S+KVS    +GL+  +LP
Sbjct: 612  DHIVAAVLLTLKRTFLTCSEFNQLLYGSGVFALGRHSYVSNSSQKVSGHAPDGLINPILP 671

Query: 2443 TIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKNGEEDEDQNAEH 2622
             IWKPEPLWTGKQVI+ALLNHITRG APC V+NQ K+P  YFT D+    +EDEDQNAE+
Sbjct: 672  AIWKPEPLWTGKQVISALLNHITRGFAPCIVKNQTKLPSTYFT-DNPAMEDEDEDQNAEN 730

Query: 2623 NLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFTIFLQIHGFTCG 2802
            N LVWKNELVRGVIDKAQFGKFGLVHTVQELYGS SAG LL+A SRLFT+FLQIHGFTCG
Sbjct: 731  NFLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSESAGNLLTAFSRLFTMFLQIHGFTCG 790

Query: 2803 VDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEELQLEIQKVICSDRESAT 2982
            VDDL+ILP YD +RK+KLE EDVGEEVHC+F+ FKPGQIG EELQLEI+K IC DRESAT
Sbjct: 791  VDDLMILPDYDVKRKEKLEQEDVGEEVHCDFINFKPGQIGREELQLEIEKAICRDRESAT 850

Query: 2983 ASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTVNFQQISA 3162
            A LDMKMKNKLT KLT EGSQ+LKHLLT GLLKPFP+NCISVMTTTGAKGSTVNFQQISA
Sbjct: 851  ALLDMKMKNKLTMKLTTEGSQVLKHLLTDGLLKPFPQNCISVMTTTGAKGSTVNFQQISA 910

Query: 3163 YLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREG 3342
            YLGQQELEGKRVPRMVSGKTLP FPPWDF SRAGGFITDRFL+GLRPQEYYFHCMAGREG
Sbjct: 911  YLGQQELEGKRVPRMVSGKTLPSFPPWDFASRAGGFITDRFLSGLRPQEYYFHCMAGREG 970

Query: 3343 LVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHQTSFLKN 3522
            LVDTAVKTSRSGYLQRCL+KNLESLKV YDYTVRDADGSIIQF YGEDGVD H+TSFLKN
Sbjct: 971  LVDTAVKTSRSGYLQRCLVKNLESLKVGYDYTVRDADGSIIQFCYGEDGVDAHKTSFLKN 1030

Query: 3523 FKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEVQDKSKEKQIGSAIEQLH 3702
            FKAL +N+ETI QKFQN+ QFN YI+KLPEGLEEEA  FIQ+ Q  S  KQ+        
Sbjct: 1031 FKALSNNQETIQQKFQNKHQFNFYIKKLPEGLEEEAMHFIQKAQTLSSVKQV-------- 1082

Query: 3703 KKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGVIAAQSVGEPSTQMT 3882
                                + +KF+ +V+QK+LSSL  +GEPVGVIAAQS+GEPSTQMT
Sbjct: 1083 -------------------VDHHKFMRVVEQKFLSSLVPAGEPVGVIAAQSIGEPSTQMT 1123

Query: 3883 LNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRSKHEVVSLVSRVKKV 4062
            LNTFHLAGRGEMNVTLGIPRLQEILMTAS+VI+TP+LTCPF Q +SK   +S++S +KK+
Sbjct: 1124 LNTFHLAGRGEMNVTLGIPRLQEILMTASEVIRTPMLTCPFLQRQSKPNALSVISNLKKI 1183

Query: 4063 TVADLVESMDVQLSIHPRQVARTYKLIIKVKDTEFVPLADIHDTLKSVFLRELEDAIENH 4242
            T+ADL+ESMDV +S HP+ V R YKL +++KDTEFV L D + TLK+ FL+ELEDA+ENH
Sbjct: 1184 TIADLIESMDVSISFHPK-VGRIYKLRMRLKDTEFVSLEDTYKTLKTSFLKELEDALENH 1242

Query: 4243 VIFLSRVSGIKNFMSSSISEVSNEADED---DSGVRTQEAXXXXXXXXXXXXXXXXXVQK 4413
            V+FL +V+ I +F S S  E  +E +ED   D     +E                  VQK
Sbjct: 1243 VVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQEAEEEGDDDGGDSDAGEDLDSDVQK 1302

Query: 4414 RKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEEAEHSEDNDGAS 4593
            R+QQA D+M                 ED +K  ++ D  +D     ++  +  +D D  S
Sbjct: 1303 RRQQARDDMDYEDASDSEQREE---EEDLDKANAEEDDDDDENEWNEKCDDDHDDYDQRS 1359

Query: 4594 NADEVMSEAKSSGRK---GRATSERIEMPKEDS--KKIRRGISMEVKGLSFEVDFRFTTE 4758
            +   ++ +    GRK      TSE+I++    S  K+  R I ME++GLS EV F+FT+E
Sbjct: 1360 SEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEIEGLSLEVHFKFTSE 1419

Query: 4759 PHLLLAQIAQKTAKKVYIKRS-GKISQCKMVQYDPDEKTVIWDD---KKKPNRGDAEKQD 4926
            PH+LLAQ+ QKTAKKVY+K++ GK++QCK+VQYDPDEKTVIWDD   K+K  +   +  D
Sbjct: 1420 PHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPDEKTVIWDDDKKKEKATKNGRKADD 1479

Query: 4927 DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDI 5106
            D +YWAVKASG D +SFWEM D LDL+RLY NNI++ML TYGVEAA ATIIRE+K VFDI
Sbjct: 1480 DAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHSMLKTYGVEAASATIIREMKNVFDI 1539

Query: 5107 YGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLT 5286
            YGVKID+RHLSLI D+M H GGYRPMSRHGSI +S+SPFLKMSFETASKFIVEAA +GL 
Sbjct: 1540 YGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSVSPFLKMSFETASKFIVEAAIYGLR 1599

Query: 5287 DNLETPSSRICLGLPVKMGT-GCFELM 5364
            D+LE+PSSRICLGLPV++GT G F+LM
Sbjct: 1600 DDLESPSSRICLGLPVRVGTGGPFDLM 1626


>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            tomentosiformis]
          Length = 1938

 Score = 2117 bits (5485), Expect = 0.0
 Identities = 1096/1663 (65%), Positives = 1296/1663 (77%), Gaps = 19/1663 (1%)
 Frame = +1

Query: 448  CKSCGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQ 627
            CKSCGQ   HC GHCGHI+LVSP +NPLLFNML+N+L +TCF C  FR+S+ EV+ CVS+
Sbjct: 318  CKSCGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFYCFHFRASKEEVEKCVSE 377

Query: 628  LELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYE-D 804
            LELI KG+ + AK + +     D           D E++ GSH S +T   + ++  E +
Sbjct: 378  LELIAKGDVIGAKTMDVLSP--DNS--------ADREESEGSHMSCTTDDLNLQDRSEYN 427

Query: 805  KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNS 984
            K+  WD+ Q  EAM+V++  LK K  KC NCE  NPKINKP+FG FH++ +++ +I  N 
Sbjct: 428  KRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMD-ISSKQIIFNY 486

Query: 985  IRSSR-LDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKR 1161
            I+ S+  ++  +GG E+  S EVVNA++   + ++  + A+S     +S  +  + D + 
Sbjct: 487  IKKSQTFNLQCTGGSEENLSPEVVNATEPLGEAETSLSMASSG-RLENSMARGRQGDEES 545

Query: 1162 IKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYS 1338
            I +       Q + FS   LPSQVR I+  LWENE  LC++  +IQ Q      K  G S
Sbjct: 546  IVM------QQKDLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHLNTPIKVAGPS 599

Query: 1339 MFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL 1518
            MFFLE+ILVPPI+FRPPAKGGDSVMEHPHT+LLGK+LQSNIALGNAH N A RSKIISRL
Sbjct: 600  MFFLESILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNQAGRSKIISRL 659

Query: 1519 MDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDP 1698
            MDLQQS+NVLFDSKTA    QKD   GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDP
Sbjct: 660  MDLQQSVNVLFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDP 719

Query: 1699 YLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPAS 1878
            YLSVNEIG+PPYFALRLTYPERVTPWN GK+R A+INGPE HPGA ++ D +STVKLP+ 
Sbjct: 720  YLSVNEIGVPPYFALRLTYPERVTPWNAGKMRDAIINGPENHPGALSFADRISTVKLPSG 779

Query: 1879 -----KKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKP 2043
                 KK+R+AISRKLPSSRGA+TQSG NDE EFEGK+VYRHLQDGDIVLVNRQPTLHKP
Sbjct: 780  NGTNIKKIRMAISRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTLHKP 839

Query: 2044 SIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 2223
            SIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNANEQYI
Sbjct: 840  SIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYI 899

Query: 2224 VPTRGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVS 2403
            VPT+GDTVRGLIQDHIV AVLLTMKNTFLT  EF+QLLYGSGVFA GPGS  GN S KVS
Sbjct: 900  VPTKGDTVRGLIQDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSNKVS 959

Query: 2404 LVDSEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDS- 2580
            +VDSEG+V+++LP +WKP+PLWTGKQVITALLNH+T+G  PCTV+N+GKIP  YF   S 
Sbjct: 960  VVDSEGVVQTILPAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYPYFLSLSR 1019

Query: 2581 ---YKNGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSA 2751
               Y++ EE+ED+ AE+  L+WKNELVRGVIDKAQFGKFGLVHT+QELYG+N AGILLSA
Sbjct: 1020 LAEYQSREEEEDRTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGANKAGILLSA 1079

Query: 2752 LSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEGEDVGEEVHCEFVKFKPGQIGPEE 2931
            LSRLFTIFLQ+HGFTCG+DDL+ILPHYD +RK++LEG DVGEE HC+FVKFKPG+IGP E
Sbjct: 1080 LSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGGDVGEEAHCDFVKFKPGEIGPLE 1139

Query: 2932 LQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVM 3111
            LQLEI+K I S++E+ATA+LDMKMKNKL NK    GSQ  K LL  GLLKPFP+NCI++M
Sbjct: 1140 LQLEIEKAISSNKEAATAALDMKMKNKLANK----GSQFNKELLLKGLLKPFPRNCIALM 1195

Query: 3112 TTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLT 3291
            T TGAKGSTVNFQQIS+YLGQQELEGKRVPRMVSGKTLPCFPPWDF SRAGG+++DRFL+
Sbjct: 1196 TITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSDRFLS 1255

Query: 3292 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQF 3471
            GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQF
Sbjct: 1256 GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQF 1315

Query: 3472 YYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARRFIQEV 3651
            YYGEDGVDVH+TSFLKNFKAL+DN+ETICQK +  R+ NSYIE+LP+GLEE+ ++F    
Sbjct: 1316 YYGEDGVDVHRTSFLKNFKALKDNQETICQKLRQGRKLNSYIERLPDGLEEKVKQF---- 1371

Query: 3652 QDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEP 3831
                     G   ++L KK + +  K   +K+   +KE+  F+ELV QKY SSLA SGEP
Sbjct: 1372 --------WGKKAKKLEKKLEKQVKKEEISKQ--LKKEEVDFLELVGQKYFSSLADSGEP 1421

Query: 3832 VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQ 4011
            VGV+A QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASD IKTPI+TCPF  
Sbjct: 1422 VGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDAIKTPIMTCPFLG 1481

Query: 4012 WRSKHEVVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVPLAD 4182
            W+SK +  SL++ VKK+TVAD++ESM+V    LSI+  QV++ YKL +K+K+ EFV   D
Sbjct: 1482 WKSKDDAQSLLAEVKKITVADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFVSSED 1541

Query: 4183 IHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSGVRTQEA--- 4353
               TLK VFLRELEDAIE+H+  LS+++GIKNF SSS S  S+E +E+ S  R +E    
Sbjct: 1542 CDYTLKYVFLRELEDAIESHLALLSKINGIKNFKSSSDSVASHETEENASSTRHEEEMLD 1601

Query: 4354 XXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE 4533
                              QKRKQQ TDEM                +E  E  KSD  H  
Sbjct: 1602 DDDEAEDERTEEDLSSDAQKRKQQTTDEMDYDDGPEDEASEAETTAE-VEDEKSDQTH-- 1658

Query: 4534 DTENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKK-IRRGISM 4710
            +  N  +EE     + +  S      S  K++  K + T ++ +  +  SKK   R + +
Sbjct: 1659 EIGNRDEEETGDHGNEEQTSKLHSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDRSVFI 1718

Query: 4711 EVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDK 4890
             V+GL FEV FRF  EPH+LLAQ+AQKTAKKVYIK +GKI QC+MV+YD  E TV+WD K
Sbjct: 1719 AVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIEQCRMVKYDVSENTVMWDVK 1778

Query: 4891 KKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARA 5070
            +  N+    +  D++YWA+KA+GVDF +FWEM DD+D++R+Y+NNI +MLNTYGVEAARA
Sbjct: 1779 QIKNQ---SQDTDSAYWALKAAGVDFGTFWEMQDDIDVNRIYTNNIRSMLNTYGVEAARA 1835

Query: 5071 TIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETAS 5250
             IIREVK VF IYGV+IDFRHLSLIADYMTHTGGY+PMSRHGSISESLSPFLKMSFETAS
Sbjct: 1836 AIIREVKTVFGIYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSFETAS 1895

Query: 5251 KFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            KFIVEAA+HGLTDNLETPSSRICLGLPVKMGTGCF++MQKLD+
Sbjct: 1896 KFIVEAASHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1938


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score = 1979 bits (5128), Expect = 0.0
 Identities = 1046/1753 (59%), Positives = 1285/1753 (73%), Gaps = 52/1753 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            GTTE VEAV+F F TDEEVR++S  KIT+P +LD +++P+PGGLYDPA+G +DE++PC+S
Sbjct: 7    GTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR+++C GHCGHIDLVS  YNPLLFN+L+N+L KTCF C  F++S   V   VSQLEL
Sbjct: 67   CGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLEL 126

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTS-DSTVFSDGENHYED--K 807
            I KG+ V AK L      +   +  +       ED+ GSH S  STV S   ++     K
Sbjct: 127  ISKGDVVGAKNL----DSISPSESSYP------EDSDGSHVSCSSTVNSSARDNCSVHLK 176

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            Q  W S Q  EAMSV++ FLK K R C+NC+  +P++ KPTFGWFH+  L++ + R+N I
Sbjct: 177  QQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVI 236

Query: 988  RSSRLDVTHSGGGEDKPSSEVVNASD-YSWKDDSGTAEANSFLTASDS-----TKKPSKK 1149
            R S+L+   S   E+K SSEV N +D + W D   T E +S +  +D      TK+  +K
Sbjct: 237  RGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERK 296

Query: 1150 DAKR-IKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGK 1323
             A+  I+ + Q      ++FSGPLLPS+VRDI+ RLWENE  LCS+I DI Q++   SG 
Sbjct: 297  GAQAPIEFIKQ-----KSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGN 351

Query: 1324 ATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSK 1503
              GYSMFFLETILVPPIKFRPP+KG  SVMEHP T+LLGK+LQ+NIALGNAH NN+ERSK
Sbjct: 352  KAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSK 411

Query: 1504 IISRLMDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSV 1683
            IISR MDLQQSINVLFD KTA  Q Q+D  SGICQ LEKKEG+FRQKMMGKRVNFACRSV
Sbjct: 412  IISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSV 471

Query: 1684 ISPDPYLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTV 1863
            ISPDPYL+VNEIGIPPYFALRLTYPE+VTPWNV KLR A+INGPEIHPGAT YVD +STV
Sbjct: 472  ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTV 531

Query: 1864 KLPASKKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKP 2043
            KL  +KKMR++ISRKLPSSRG + Q G + + EFEGKIVYRHLQDGDIVLVNRQPTLHKP
Sbjct: 532  KLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKP 591

Query: 2044 SIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYI 2223
            SIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QYI
Sbjct: 592  SIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYI 651

Query: 2224 VPTRGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVS 2403
            VP+RGD +RGLIQDHIVSAVLLT K+TFLTR +++QLLY SG+ + G GS  G   +KVS
Sbjct: 652  VPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVS 710

Query: 2404 LVDSEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTG--D 2577
            ++DSE  ++ LLP IWKPEPLW+GKQVITA+LNHITRGR P T E  GKIP+ YF    D
Sbjct: 711  VLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEID 770

Query: 2578 SYKNGEED------------EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYG 2721
              K+G+              E ++ E+ LL+ KNELVRGVIDKAQF K+GLVH VQELYG
Sbjct: 771  EKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYG 830

Query: 2722 SNSAGILLSALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLE-GEDVGEEVHCEFV 2898
            SN+AGILLS LSRLFT+FLQ+HGFTCGVDDL+I P+YD  RK +L+  E++GE VHC+F+
Sbjct: 831  SNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFI 890

Query: 2899 KFKPGQIGPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLL 3078
                G+I P +LQ+E++K+I S+ E+A   LD  MKN+L N+LT   S++ K LL  GL+
Sbjct: 891  GSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKGLV 946

Query: 3079 KPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSR 3258
            KPFPKNC+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLPCFPPWD  +R
Sbjct: 947  KPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAAR 1006

Query: 3259 AGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYT 3438
            AGGFI+DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYT
Sbjct: 1007 AGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYT 1066

Query: 3439 VRDADGSIIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGL 3618
            VRD+DGSI+QF YG+DGVDVHQTSF+  F+AL  N E +C+KF    +FN YI+KLP+ L
Sbjct: 1067 VRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKEL 1126

Query: 3619 EEEARRFIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQK 3798
             ++ ++FI+   ++ ++                              K+Q  F+ LVKQK
Sbjct: 1127 RKKTKKFIEGFMEERQDFD--------------------------NMKKQKDFVNLVKQK 1160

Query: 3799 YLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVI 3978
            Y+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++ I
Sbjct: 1161 YISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDI 1220

Query: 3979 KTPILTCPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYKLIIK 4149
            KTPI+TCP    RSK +   L +++KKVTVAD+ ESM+V +   ++   Q    YKL +K
Sbjct: 1221 KTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMK 1280

Query: 4150 VKDTEFVP------LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSN 4311
            + +    P      L D  +TL++VF+RELEDAI+NH++ LS++SGIKNF+  S S  S 
Sbjct: 1281 LYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASK 1340

Query: 4312 EADEDDSG---VRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXX 4482
            E DED SG                           QKRKQQA+DEM              
Sbjct: 1341 ETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEM-------------- 1386

Query: 4483 XLSEDGEKGKSDGDHLE-DTENGKDEEAEHSEDNDGASNADEV------------MSEAK 4623
                  + G S+G+  E +   G  EE +  ED    SN +EV             S++K
Sbjct: 1387 ------DYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSK 1440

Query: 4624 SS-GRKGRATSERIEMPKEDSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAK 4800
            SS  +K +  ++R +  +   K   R I ++ KG  FEV FRFT EPH+LLAQIAQK A 
Sbjct: 1441 SSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAAN 1500

Query: 4801 KVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFW 4980
            KVYI+ SGKI  C+++  + D+      D KK  R +   ++     A++ +GVDF +FW
Sbjct: 1501 KVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKK--RENIPGEEKKKLPALQTAGVDFTAFW 1558

Query: 4981 EMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMT 5160
            +M D+LD+  +YSNN++AMLNT+GVEAARATII+EV  VF+ YGVK++ RHLSLIAD+MT
Sbjct: 1559 KMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMT 1618

Query: 5161 HTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKM 5340
            H+GGYRPM+RHG I+ES+SPF KM+FETASKFIVEAA+HG+TDNLE+ S+RICLGLPVKM
Sbjct: 1619 HSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKM 1678

Query: 5341 GTGCFELMQKLDV 5379
            GTGCF+LMQK+++
Sbjct: 1679 GTGCFDLMQKIEI 1691


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1956 bits (5066), Expect = 0.0
 Identities = 1034/1747 (59%), Positives = 1270/1747 (72%), Gaps = 46/1747 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            GTTE VEAV+F F TDEEVR++S  KIT+P +LD +++P+PGGLYDPA+G +DE++PC+S
Sbjct: 7    GTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR+++C GHCGHIDLVS  YNPLLFN+L+N+L KTCF C  F++S   V   VSQLEL
Sbjct: 67   CGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLEL 126

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTS-DSTVFSDGENHYED--K 807
            I KG+ V AK L      +   +  +       ED+ GSH S  STV S   ++     K
Sbjct: 127  ISKGDVVGAKNL----DSISPSESSYP------EDSDGSHVSCSSTVNSSARDNCSVHLK 176

Query: 808  QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSI 987
            Q  W S Q  EAMSV++ FLK K R C+NC+  +P++ KPTFGWFH+  L++ + R+N I
Sbjct: 177  QQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVI 236

Query: 988  RSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKR-I 1164
            R S+L+   +G   D+  S +                          TK+  +K A+  I
Sbjct: 237  RGSKLERPLNGVDTDETHSSIAPTDGIQ----------------DTVTKRLERKGAQAPI 280

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSM 1341
            + + Q      ++FSGPLLPS+VRDI+ RLWENE  LCS+I DI Q++   SG   GYSM
Sbjct: 281  EFIKQ-----KSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 335

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFLETILVPPIKFRPP+KG  SVMEHP T+LLGK+LQ+NIALGNAH NN+ERSKIISR M
Sbjct: 336  FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 395

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQQSINVLFD KTA  Q Q+D  SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPY
Sbjct: 396  DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 455

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            L+VNEIGIPPYFALRLTYPE+VTPWNV KLR A+INGPEIHPGAT YVD +STVKL  +K
Sbjct: 456  LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 515

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            KMR++ISRKLPSSRG + Q G + + EFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 516  KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 575

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEAYNIVNAN QYIVP+RGD
Sbjct: 576  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 635

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
             +RGLIQDHIVSAVLLT K+TFLTR +++QLLY SG+ + G GS  G   +KVS++DSE 
Sbjct: 636  PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGL-SSGSGSFIGKPGKKVSVLDSED 694

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTG--DSYKNGE 2595
             ++ LLP IWKPEPLW+GKQVITA+LNHITRGR P T E  GKIP+ YF    D  K+G+
Sbjct: 695  EMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGK 754

Query: 2596 ED------------EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGI 2739
                          E ++ E+ LL+ KNELVRGVIDKAQF K+GLVH VQELYGSN+AGI
Sbjct: 755  GKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGI 814

Query: 2740 LLSALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLE-GEDVGEEVHCEFVKFKPGQ 2916
            LLS LSRLFT+FLQ+HGFTCGVDDL+I P+YD  RK +L+  E++GE VHC+F+    G+
Sbjct: 815  LLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGK 874

Query: 2917 IGPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKN 3096
            I P +LQ+E++K+I S+ E+A   LD  MKN+L N+LT   S++ K LL  GL+KPFPKN
Sbjct: 875  IDPVKLQVEVEKIILSNGEAAITRLDRMMKNEL-NELT---SKVNKDLLLKGLVKPFPKN 930

Query: 3097 CISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFIT 3276
            C+S+MTTTGAKGSTVNF QIS++LGQQ+LEGKRVPRMVSGKTLPCFPPWD  +RAGGFI+
Sbjct: 931  CLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFIS 990

Query: 3277 DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADG 3456
            DRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LKVCYDYTVRD+DG
Sbjct: 991  DRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDG 1050

Query: 3457 SIIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEKLPEGLEEEARR 3636
            SI+QF YG+DGVDVHQTSF+  F+AL  N E +C+KF    +FN YI+KLP+ L ++ ++
Sbjct: 1051 SIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKLPKELRKKTKK 1110

Query: 3637 FIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLA 3816
            FI+   ++ ++                              K+Q  F+ LVKQKY+SSLA
Sbjct: 1111 FIEGFMEERQDFD--------------------------NMKKQKDFVNLVKQKYISSLA 1144

Query: 3817 QSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILT 3996
            Q GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA++ IKTPI+T
Sbjct: 1145 QPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMT 1204

Query: 3997 CPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYKLIIKVKDTEF 4167
            CP    RSK +   L +++KKVTVAD+ ESM+V +   ++   Q    YKL +K+ +   
Sbjct: 1205 CPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPAL 1264

Query: 4168 VP------LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDD 4329
             P      L D  +TL++VF+RELEDAI+NH++ LS++SGIKNF+  S S  S E DED 
Sbjct: 1265 YPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDA 1324

Query: 4330 SG---VRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDG 4500
            SG                           QKRKQQA+DEM                    
Sbjct: 1325 SGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEM-------------------- 1364

Query: 4501 EKGKSDGDHLE-DTENGKDEEAEHSEDNDGASNADEV------------MSEAKSS-GRK 4638
            + G S+G+  E +   G  EE +  ED    SN +EV             S++KSS  +K
Sbjct: 1365 DYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKK 1424

Query: 4639 GRATSERIEMPKEDSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKR 4818
             +  ++R +  +   K   R I ++ KG  FEV FRFT EPH+LLAQIAQK A KVYI+ 
Sbjct: 1425 AKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRS 1484

Query: 4819 SGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDL 4998
            SGKI  C+++  + D+      D KK  R +   ++     A++ +GVDF +FW+M D+L
Sbjct: 1485 SGKIDLCQVIDCNKDQVIYYGRDPKK--RENIPGEEKKKLPALQTAGVDFTAFWKMQDEL 1542

Query: 4999 DLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYR 5178
            D+  +YSNN++AMLNT+GVEAARATII+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYR
Sbjct: 1543 DVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYR 1602

Query: 5179 PMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFE 5358
            PM+RHG I+ES+SPF KM+FETASKFIVEAA+HG+TDNLE+ S+RICLGLPVKMGTGCF+
Sbjct: 1603 PMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFD 1662

Query: 5359 LMQKLDV 5379
            LMQK+++
Sbjct: 1663 LMQKIEI 1669


>ref|XP_015579396.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
            [Ricinus communis]
          Length = 1681

 Score = 1838 bits (4761), Expect = 0.0
 Identities = 998/1743 (57%), Positives = 1217/1743 (69%), Gaps = 42/1743 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G TE ++++ F FLTDEEVR+HS VKITNP LLD++E+P+PGGLYDPA+GPL E + CK+
Sbjct: 6    GATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKT 65

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR+ +C GHCGHIDLVSP YNPLLFN L+ +L +TCF C  FR  R +V+ C+ QLEL
Sbjct: 66   CGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLEL 125

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFS-----DGENHYE 801
            IVKG+ V AK+L   +S+          E +  E++  SH S  T+ S     DGE+   
Sbjct: 126  IVKGDIVGAKRL---ESVSPS-------EALYPEESDLSHESCPTIHSGVQCNDGEH--- 172

Query: 802  DKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSN 981
             +Q  W S Q  EAMSVLN FLK K +KC+NCE  NP I KPTFGWFH + +++  IR+N
Sbjct: 173  TRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRAN 232

Query: 982  SIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKR 1161
             I   +L      GG     SE+   +D     + G   +         TKK  KK+ K 
Sbjct: 233  VITGHQL------GG--LLGSEIEGTTDVEDAAEPGDQHSG--------TKKHKKKERKE 276

Query: 1162 IKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYS 1338
            +    +    Q + FS  LLPS+V++ L  LW+NE  +CS+I D+QQQ+     +  G +
Sbjct: 277  VLEFTR----QKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQE--FGKRKAGPA 330

Query: 1339 MFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL 1518
            MFFLETILVPPIKFRPP KGGDSVMEHP T+LL K+LQSNI+LG+AH+N  E SKI+ R 
Sbjct: 331  MFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRW 389

Query: 1519 MDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDP 1698
            +DLQQSIN LFDSKTA    Q++G  GICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP
Sbjct: 390  LDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDP 449

Query: 1699 YLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPAS 1878
            Y+ VNEIGIPP FA++LTYPERVTPWN+ KLR AVING E HPGAT YVD +S  KLP +
Sbjct: 450  YIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPA 509

Query: 1879 KKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAH 2058
            +K R++ISRKLPSSRGA+TQ+G   E EFEGKIVYRHLQDGD+VLVNRQPTLHKPSIMAH
Sbjct: 510  RKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAH 569

Query: 2059 VVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRG 2238
            VVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDE+SRAEAYNIVNAN Q++ P+ G
Sbjct: 570  VVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNG 629

Query: 2239 DTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSE 2418
            + +RGLIQDHIVSAVLLT K+TFL++ EF+QLLY SGV   GP S  G   +KV    SE
Sbjct: 630  EPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSE 689

Query: 2419 GLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKN--- 2589
              +++L P IWKP+PLWTGKQVITA+LNHIT    P TVE   KIP N+F   + ++   
Sbjct: 690  DEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPC 749

Query: 2590 GEEDEDQNA-------EHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLS 2748
             EE  D++A       E  +LV+KNELVRGVIDK QFG++GLVHTV EL GS++AGILLS
Sbjct: 750  QEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLS 809

Query: 2749 ALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFKPG--QI 2919
             LSRLFT +LQ+HGFTCGVDDL+IL + D +RK +LE  E  GE VH  F+  K    +I
Sbjct: 810  VLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKI 869

Query: 2920 GPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNC 3099
             P  +QL I+K I SD +SA A LD +M N+L    T+  S ++ +LL+ GLLKP  KNC
Sbjct: 870  DPVAMQLNIEKTIRSDGDSALAYLDRQMSNELN---TKTSSGVISNLLSDGLLKPSGKNC 926

Query: 3100 ISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITD 3279
            IS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD+ +R+GG+ITD
Sbjct: 927  ISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITD 986

Query: 3280 RFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS 3459
            RFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TVRDADGS
Sbjct: 987  RFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGS 1046

Query: 3460 IIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQ-RQFNSYIEKLPEGLEEEARR 3636
            ++QFYYGEDGVDVHQTSF+  FK L  N++ I ++   Q   FNSYI +LPE L+E+A R
Sbjct: 1047 VVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEALKEKADR 1106

Query: 3637 FIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLA 3816
            F+ +                      GR   +L  +E            L+KQK+L SLA
Sbjct: 1107 FLDDF------------------SIMGRIASNLVKRE--------DLYNLMKQKFLLSLA 1140

Query: 3817 QSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILT 3996
            Q GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS  IKTPI+T
Sbjct: 1141 QPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMT 1200

Query: 3997 CPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYKLIIKVKDTEF 4167
            CP  + R+  +   L  +++KVTVAD+VESM+V +   +I    V R YKL +K+     
Sbjct: 1201 CPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAH 1260

Query: 4168 VP------LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADED- 4326
             P      + D  +TL+ VFLRELEDAI+NH+  LSR+SGIK+F+  S S  S EADED 
Sbjct: 1261 YPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDV 1320

Query: 4327 --DSGVRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDG 4500
              D   R +                    QKRK QATDEM                + + 
Sbjct: 1321 AGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEE 1380

Query: 4501 EKG----KSDGDHLEDTENGKDEEAEHSED----NDGASNADEVMSEAKSSGRKGRATSE 4656
            E G       GD+  +  N    + E SE           + +  +E+ S G K +   +
Sbjct: 1381 ESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKK 1440

Query: 4657 RIEMPKED--SKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKI 4830
            + +  ++   SK   R I +E + + FEV F+FT EPH+LLA+IAQKTAKKVYI+  GKI
Sbjct: 1441 KPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKI 1500

Query: 4831 SQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSR 5010
             QC++   D  E  VI+  K    R D +        A+ A+GVDF +FW+M D LD+  
Sbjct: 1501 EQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRY 1558

Query: 5011 LYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSR 5190
            +YSNNI+AML TYGVEAAR TIIRE+  VF  YG+ +  RHLSLIAD+MTHTGGYRPMSR
Sbjct: 1559 IYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSR 1618

Query: 5191 HGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQK 5370
             G I+ES+SPF KMSFETASKFIVEAA HG  DNLETPS+RICLGLPVKMGTG F+LMQK
Sbjct: 1619 MGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQK 1678

Query: 5371 LDV 5379
            L++
Sbjct: 1679 LEI 1681


>gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis]
          Length = 1686

 Score = 1833 bits (4749), Expect = 0.0
 Identities = 998/1744 (57%), Positives = 1217/1744 (69%), Gaps = 43/1744 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G TE ++++ F FLTDEEVR+HS VKITNP LLD++E+P+PGGLYDPA+GPL E + CK+
Sbjct: 10   GATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKT 69

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR+ +C GHCGHIDLVSP YNPLLFN L+ +L +TCF C  FR  R +V+ C+ QLEL
Sbjct: 70   CGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLEL 129

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFS-----DGENHYE 801
            IVKG+ V AK+L   +S+          E +  E++  SH S  T+ S     DGE+   
Sbjct: 130  IVKGDIVGAKRL---ESVSPS-------EALYPEESDLSHESCPTIHSGVQCNDGEH--- 176

Query: 802  DKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSN 981
             +Q  W S Q  EAMSVLN FLK K +KC+NCE  NP I KPTFGWFH + +++  IR+N
Sbjct: 177  TRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRAN 236

Query: 982  SIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKR 1161
             I   +L      GG     SE+   +D     + G   +         TKK  KK+ K 
Sbjct: 237  VITGHQL------GG--LLGSEIEGTTDVEDAAEPGDQHSG--------TKKHKKKERKE 280

Query: 1162 IKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYS 1338
            +    +    Q + FS  LLPS+V++ L  LW+NE  +CS+I D+QQQ+     +  G +
Sbjct: 281  VLEFTR----QKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQE--FGKRKAGPA 334

Query: 1339 MFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRL 1518
            MFFLETILVPPIKFRPP KGGDSVMEHP T+LL K+LQSNI+LG+AH+N  E SKI+ R 
Sbjct: 335  MFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRW 393

Query: 1519 MDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDP 1698
            +DLQQSIN LFDSKTA    Q++G  GICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP
Sbjct: 394  LDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDP 453

Query: 1699 YLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPAS 1878
            Y+ VNEIGIPP FA++LTYPERVTPWN+ KLR AVING E HPGAT YVD +S  KLP +
Sbjct: 454  YIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPA 513

Query: 1879 KKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAH 2058
            +K R++ISRKLPSSRGA+TQ+G   E EFEGKIVYRHLQDGD+VLVNRQPTLHKPSIMAH
Sbjct: 514  RKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAH 573

Query: 2059 VVRVLKGEKTLRMHYANCS-SYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTR 2235
            VVRVLKGEKTLRMHYANCS +YNADFDGDE+NVHFPQDE+SRAEAYNIVNAN Q++ P+ 
Sbjct: 574  VVRVLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSN 633

Query: 2236 GDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDS 2415
            G+ +RGLIQDHIVSAVLLT K+TFL++ EF+QLLY SGV   GP S  G   +KV    S
Sbjct: 634  GEPLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRS 693

Query: 2416 EGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKN-- 2589
            E  +++L P IWKP+PLWTGKQVITA+LNHIT    P TVE   KIP N+F   + ++  
Sbjct: 694  EDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKP 753

Query: 2590 -GEEDEDQNA-------EHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILL 2745
              EE  D++A       E  +LV+KNELVRGVIDK QFG++GLVHTV EL GS++AGILL
Sbjct: 754  CQEEKSDKDAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILL 813

Query: 2746 SALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFKPG--Q 2916
            S LSRLFT +LQ+HGFTCGVDDL+IL + D +RK +LE  E  GE VH  F+  K    +
Sbjct: 814  SVLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIK 873

Query: 2917 IGPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKN 3096
            I P  +QL I+K I SD +SA A LD +M N+L    T+  S ++ +LL+ GLLKP  KN
Sbjct: 874  IDPVAMQLNIEKTIRSDGDSALAYLDRQMSNELN---TKTSSGVISNLLSDGLLKPSGKN 930

Query: 3097 CISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFIT 3276
            CIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD+ +R+GG+IT
Sbjct: 931  CISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYIT 990

Query: 3277 DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADG 3456
            DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ YD+TVRDADG
Sbjct: 991  DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADG 1050

Query: 3457 SIIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQ-RQFNSYIEKLPEGLEEEAR 3633
            S++QFYYGEDGVDVHQTSF+  FK L  N++ I ++   Q   FNSYI +LPE L+E+A 
Sbjct: 1051 SVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISELPEALKEKAD 1110

Query: 3634 RFIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSL 3813
            RF+ +                      GR   +L  +E            L+KQK+L SL
Sbjct: 1111 RFLDDF------------------SIMGRIASNLVKRE--------DLYNLMKQKFLLSL 1144

Query: 3814 AQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPIL 3993
            AQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS  IKTPI+
Sbjct: 1145 AQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIM 1204

Query: 3994 TCPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYKLIIKVKDTE 4164
            TCP  + R+  +   L  +++KVTVAD+VESM+V +   +I    V R YKL +K+    
Sbjct: 1205 TCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPA 1264

Query: 4165 FVP------LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADED 4326
              P      + D  +TL+ VFLRELEDAI+NH+  LSR+SGIK+F+  S S  S EADED
Sbjct: 1265 HYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADED 1324

Query: 4327 ---DSGVRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSED 4497
               D   R +                    QKRK QATDEM                + +
Sbjct: 1325 VAGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASE 1384

Query: 4498 GEKG----KSDGDHLEDTENGKDEEAEHSED----NDGASNADEVMSEAKSSGRKGRATS 4653
             E G       GD+  +  N    + E SE           + +  +E+ S G K +   
Sbjct: 1385 EESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKK 1444

Query: 4654 ERIEMPKED--SKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGK 4827
            ++ +  ++   SK   R I +E + + FEV F+FT EPH+LLA+IAQKTAKKVYI+  GK
Sbjct: 1445 KKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGK 1504

Query: 4828 ISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLS 5007
            I QC++   D  E  VI+  K    R D +        A+ A+GVDF +FW+M D LD+ 
Sbjct: 1505 IEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVR 1562

Query: 5008 RLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMS 5187
             +YSNNI+AML TYGVEAAR TIIRE+  VF  YG+ +  RHLSLIAD+MTHTGGYRPMS
Sbjct: 1563 YIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMS 1622

Query: 5188 RHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQ 5367
            R G I+ES+SPF KMSFETASKFIVEAA HG  DNLETPS+RICLGLPVKMGTG F+LMQ
Sbjct: 1623 RMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQ 1682

Query: 5368 KLDV 5379
            KL++
Sbjct: 1683 KLEI 1686


>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score = 1829 bits (4738), Expect = 0.0
 Identities = 982/1739 (56%), Positives = 1212/1739 (69%), Gaps = 38/1739 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G TE VEAVRF FLTDEEVR  S  KITNP + D +E+P+PGGLYDPA+GPLD+ +PC+S
Sbjct: 7    GATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLDDRTPCQS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR++HC GHCGHIDLV P YNPLLF +L  +L + CF C +F++   +V    SQLEL
Sbjct: 67   CGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQKYASQLEL 126

Query: 637  IVKGETVEAKKL----GLRQSLLDKKKMEWAL-EIVDLEDNRGSHTSDSTVFSDGEN--- 792
            I+KG+   AK L        S  DK ++     E   LE+N  +H +D+ + S  +N   
Sbjct: 127  IIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIHSVDQNCNP 186

Query: 793  -HYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTE 969
             H ++    W S Q  EAMSVL +F+K K  +C+NC   +P I  PTFGWFH+N ++N +
Sbjct: 187  MHLQEHH--WTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMN-MSNAD 243

Query: 970  IRSNSIRSSRLDVTH-SGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSK 1146
            IR+N +R  +L  T   G  +   ++E  N  D   + D      +S   +  + +  ++
Sbjct: 244  IRANVLRGCKLSDTFVHGAAQRSHTAEAENVDDVLARGDDADILESSGAVSDGTLEFVTE 303

Query: 1147 KDAKRIKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGK 1323
             D K  + +      Q  + SGPLLP +V++ +R LW+NE  LCS I DIQ ++  +SG 
Sbjct: 304  TDKKIGEHIPPDFFSQRKFLSGPLLPPEVKETMRLLWKNEARLCSLICDIQHERLHVSGM 363

Query: 1324 ATGYSMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSK 1503
               +SMFF E +LVPPIKFRPPAK GDSVMEHP T+LLGK+LQSNIALGNAH N+++RSK
Sbjct: 364  NARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNAHANSSDRSK 423

Query: 1504 IISRLMDLQQSINVLFDSKTATSQAQKDGTS-GICQYLEKKEGIFRQKMMGKRVNFACRS 1680
            II R MDLQQ++N+L+DSKT+    Q+D T+ GICQ LEKKEGIFRQKMMGKRVN+ACRS
Sbjct: 424  IIPRWMDLQQTVNILYDSKTS---GQRDNTATGICQLLEKKEGIFRQKMMGKRVNYACRS 480

Query: 1681 VISPDPYLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVST 1860
            VISPDPYL+VNEIGIPPYFALRLTYPERVTPWNV KLR A+ING E HPGAT YVD ++T
Sbjct: 481  VISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATHYVDKLAT 540

Query: 1861 VKLPASKKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHK 2040
            VKLP S+KMR++ISRKLPSSRGA+TQ G N E EFEGK+VYRHLQDGDIVLVNRQPTLHK
Sbjct: 541  VKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVNRQPTLHK 600

Query: 2041 PSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQY 2220
            PSIMAHVVRVLKGEKT+RMHYANCS+YNADFDGDE+NVHFPQDEISRAEA+NIVNAN+QY
Sbjct: 601  PSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANKQY 660

Query: 2221 IVPTRGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKV 2400
            +VPT G  +RGLIQDHI+SAVLLT ++TFLTR EFSQLLY SGV A   G   G   +K+
Sbjct: 661  VVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFVGKPGQKI 720

Query: 2401 SLVDSEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDS 2580
            S ++SE  +E +LP IWKPEPLWTGKQVITA+LNHITRGR P +V   GK P+ YF   S
Sbjct: 721  STINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAGKTPEEYFGKTS 780

Query: 2581 YKNGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSR 2760
                        E+ LL+ KNELV GVIDKAQFG +GLVHTVQELYGSN+AG+LLS LSR
Sbjct: 781  -----------GEYELLIHKNELVHGVIDKAQFGGYGLVHTVQELYGSNAAGVLLSVLSR 829

Query: 2761 LFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLE-GEDVGEEVHCEFVKFKPGQIGPEELQ 2937
            LFTIFLQ+HGFTCG+DDL+I+  YD +R  KL+  E +GE  H +FV    G   P +LQ
Sbjct: 830  LFTIFLQMHGFTCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFVGCADGDKDPIKLQ 889

Query: 2938 LEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTT 3117
            +EI+K I  + +SA   LD +M   + NKLT   S++ K+L   GL KPFPKNC+S+MT 
Sbjct: 890  VEIEKAIRRNGDSAVTRLDRRMSGAM-NKLT---SEVNKNLFPEGLCKPFPKNCLSLMTA 945

Query: 3118 TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGL 3297
            TGAKG  VN  QI + LGQQELEGKRVPRMVSGKTLPCFPPWD  SRAGGFI+DRFLTGL
Sbjct: 946  TGAKGGMVNSTQICSLLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGFISDRFLTGL 1005

Query: 3298 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYY 3477
            RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYDYTVRDADGS++QF Y
Sbjct: 1006 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDADGSVVQFIY 1065

Query: 3478 GEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFN-----SYIEKLPEGLEEEARRFI 3642
            GEDG+DVH+TSFL+ F+AL  N   + ++F NQ          YI+KLP  LE +A+ +I
Sbjct: 1066 GEDGIDVHKTSFLEEFEALAANHRIVQERFNNQLDSEVLFKYDYIKKLPVALEGKAKDYI 1125

Query: 3643 QEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQS 3822
             +   K K K +        +KRK                    F++L++ KY+SSLAQ 
Sbjct: 1126 -DTLSKKKLKSLNL------RKRK-------------------DFMKLMRSKYISSLAQP 1159

Query: 3823 GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCP 4002
            GEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILM AS+ I+TP++TCP
Sbjct: 1160 GEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMRASEKIQTPVMTCP 1219

Query: 4003 FSQWRSKHEVVSLVSRVKKVTVADLVESMD---VQLSIHPRQVARTYKLIIKVKDTEFVP 4173
              + +++ +   L ++++KVTVAD++ESM+   V  S+   QV+  YKL +K+   E  P
Sbjct: 1220 LRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLKLYPPELYP 1279

Query: 4174 ------LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEADEDDSG 4335
                  L D   TLK VF+ E+EDAI++H++ LS++ GI N + S+ S   + ADED   
Sbjct: 1280 PYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGITNVVHSTQSNSGDGADEDGPT 1339

Query: 4336 VRTQEAXXXXXXXXXXXXXXXXXV----QKRKQQATDEMXXXXXXXXXXXXXXXLSEDGE 4503
             ++Q A                 +    QKRK+QATDEM                  D E
Sbjct: 1340 SKSQAAEENDDAGDDDDYEAPDDLGADAQKRKRQATDEMDYEDDMENEIVNTENGRSDIE 1399

Query: 4504 KGKSDGDHLEDTE----NGKDEEAEHSEDNDGASNADE---VMSEAKSSGRKGRATSERI 4662
                    ++  E    N  D E +  +  D AS        +S++KSSG K  A +   
Sbjct: 1400 ASAGFESEIDQAEVEAGNIMDGEIQVFDAEDEASQTPSQHGTVSKSKSSGGKDEADAR-- 1457

Query: 4663 EMPKEDSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCK 4842
             M +   K   R   M  +GL FEV FRFT EPH+LLAQIAQKTAK VY+KRSG I  C 
Sbjct: 1458 GMTRRTKKDSDRAFFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCS 1517

Query: 4843 MVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSN 5022
            +V                P + D E +       ++ SGVDF +FW M DDLD+ RL SN
Sbjct: 1518 VV---------------VPKKADGEPEIP----ELQTSGVDFPTFWNMQDDLDIRRLKSN 1558

Query: 5023 NINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSI 5202
            +I+A+LNTYGVEAARATII +V QVF  YG+ ++ RHLSLIAD+MT TGGYRPMSR G I
Sbjct: 1559 DIHAVLNTYGVEAARATIIEQVNQVFKSYGIAVNIRHLSLIADFMTQTGGYRPMSRFG-I 1617

Query: 5203 SESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            +E++SPF KMS+ETAS+F++EAA HG  DNLE+PS+RICLGLPVKMGTGCF+LMQK+++
Sbjct: 1618 AETISPFSKMSYETASRFVIEAAYHGEMDNLESPSARICLGLPVKMGTGCFDLMQKINI 1676


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1779 bits (4609), Expect = 0.0
 Identities = 972/1756 (55%), Positives = 1208/1756 (68%), Gaps = 55/1756 (3%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G T+ VEAVRF F+T EEVR+HS +K+TN NLLD++++P+PGGLYD  +GPL++ +PCKS
Sbjct: 7    GATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLEDRTPCKS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CG    HC GHCGHIDLVSP YNPLLFN L+ +L + CF C  FR+ + EV+ CVSQL+L
Sbjct: 67   CGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERCVSQLKL 126

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQAF 816
            I  G+ V AK+L    +                + N GS  S S V     N    K   
Sbjct: 127  IGNGDIVGAKRLDSDSADASSYS----------DYNEGSQESGSIV----HNSEAVKPKE 172

Query: 817  WDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSS 996
            W S QL EAMSVLN FLK K  KC+NC+  NP I KP FGW H+N +   ++R N IR  
Sbjct: 173  WTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGC 232

Query: 997  RLDVTHSGGGEDKPSSEVVNASDYSWKDDS------GTAEANSFLTASDSTKKPSKKDAK 1158
            ++  T S    D+  S + +A D S   +        T+E     +  +  K   KK   
Sbjct: 233  KMVDTFS----DEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQV 288

Query: 1159 RIKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENE-PLCSYIYDIQQQQCKLSGKATGY 1335
             ++ + Q      N FSGPLLPS+V+ I + LWENE  LCS I DIQQQ     GK  GY
Sbjct: 289  PLEFMKQ-----KNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGY 340

Query: 1336 SMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISR 1515
            SMFFLETILVPPIKFR P KGGDSVMEHP T+LL K+LQ+NI+LGNA+ NN + SK + R
Sbjct: 341  SMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVR 400

Query: 1516 L-MDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISP 1692
            L MDLQQS+N+LFDSKTA SQ  +D +SGICQ LEKKEG+FRQKMMGKRVNFACRSVISP
Sbjct: 401  LWMDLQQSVNLLFDSKTAMSQG-RDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISP 459

Query: 1693 DPYLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLP 1872
            DPYL+VNEIGIPPYFALRLTYPERVTPWNV KLR A+ING E HPGAT YVD +ST +LP
Sbjct: 460  DPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLP 519

Query: 1873 ASKKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIM 2052
             S+K R++ISRKLPSSRGA+ Q G N + EFEGKIV RHLQDGD+VLVNRQPTLHKPSIM
Sbjct: 520  PSQKARISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIM 579

Query: 2053 AHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPT 2232
            AHVVRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ P+
Sbjct: 580  AHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPS 639

Query: 2233 RGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVD 2412
             G+ +R LIQDHIVSAVLLT ++TFL+R EF+QLLY SGV +    S  G   +KV +  
Sbjct: 640  NGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVST 699

Query: 2413 SEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKNG 2592
            SE  +  ++P I KP+PLWTGKQVI+++L+HITRGR P TV    KIP+++F     KN 
Sbjct: 700  SEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNK 759

Query: 2593 EEDEDQNA--------------------EHNLLVWKNELVRGVIDKAQFGKFGLVHTVQE 2712
            +   ++N                     E  +L+++N+LVRGVIDKAQF  +GLVHTVQE
Sbjct: 760  QSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQE 819

Query: 2713 LYGSNSAGILLSALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHC 2889
            LYGSN+AGILLS  SRLFT+FLQ+HGFTCGVDDL+I+   D +RK +LE  E    E H 
Sbjct: 820  LYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHY 879

Query: 2890 EFVKFKPGQIGPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTA 3069
            E    K       ELQLEI++ I  D E+A  +LD KM + L N+ + +G  +L  LL+ 
Sbjct: 880  ELFGVKVN--SETELQLEIERTIRRDGETALTALDRKMISVL-NENSSKG--VLTELLSE 934

Query: 3070 GLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDF 3249
            GL+K   +NCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD+
Sbjct: 935  GLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDW 994

Query: 3250 TSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCY 3429
             +RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ Y
Sbjct: 995  AARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISY 1054

Query: 3430 DYTVRDADGSIIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSYIEK-L 3606
            D+TVRDADGSI+QF YGEDG+DVHQTSF+  F+AL  N++ + +K  +Q       +K L
Sbjct: 1055 DHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEPDDSDKIL 1114

Query: 3607 PEGLEEEARRFIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIEL 3786
            P+GL  +A +FI+E   K + ++I                            +   F+ L
Sbjct: 1115 PDGLRSKAEQFIREEIKKYQHQKI----------------------------KPKDFLNL 1146

Query: 3787 VKQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA 3966
            +K K+LSSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA
Sbjct: 1147 LKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA 1206

Query: 3967 SDVIKTPILTCPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVARTYK 4137
            S  I+TP++TCP  + ++K + + L +++KK+TVAD++ESM+V +   ++    +   YK
Sbjct: 1207 SIDIRTPVMTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYK 1266

Query: 4138 LII------KVKDTEFVPLADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSIS 4299
            L +      K  +   + + D    LK VFLRELEDAI+NH++ LS++SGIK FM  S  
Sbjct: 1267 LKMMLGKPDKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQR 1326

Query: 4300 EVSNEADEDDSGVRTQEA------XXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXX 4461
              SNE DED S  R++E                         QK+KQQ TDEM       
Sbjct: 1327 NASNEMDEDVSEGRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSE 1386

Query: 4462 XXXXXXXXLSE-DGEKGKSDGD------HLEDTENGKDEEAEHSEDNDGASNADEVMSEA 4620
                    L+  + E   S+ +      ++  ++NGKDE ++ S + +  SN     S  
Sbjct: 1387 VEQNEGASLAALESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNP---KSRE 1443

Query: 4621 KSSGRKGRATSERIEMPKEDSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAK 4800
            + +G + +    + +  +++S    R I   ++GL FEV F+   EPH+LLAQIA+KTAK
Sbjct: 1444 EKTGSEPKRKKMKAKFVRKESD---RAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAK 1500

Query: 4801 KVYIKRSGKISQCKMVQYDPDEKTVIW---DDKKKPNRGDAEKQDDTSYWAVKASGVDFK 4971
            KVYI+  GKI QC++   D  E  V +   D KK+ +  D EK       A+  +GVDF 
Sbjct: 1501 KVYIQSFGKIDQCRVT--DCSENQVFYYGEDPKKRKSPSDKEK-----IQALHTTGVDFG 1553

Query: 4972 SFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIAD 5151
            +FW+M D +D+  LYSN+I+AMLNTYGVEAAR TIIRE+  VF  YG+ ++ RHL+LIAD
Sbjct: 1554 AFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIAD 1613

Query: 5152 YMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLP 5331
            +MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA HGL DNLETPSSRICLGLP
Sbjct: 1614 FMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLP 1673

Query: 5332 VKMGTGCFELMQKLDV 5379
            VKMGTG F+LMQK+++
Sbjct: 1674 VKMGTGSFDLMQKVEI 1689


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Glycine max]
            gi|947084325|gb|KRH33046.1| hypothetical protein
            GLYMA_10G095200 [Glycine max]
          Length = 1651

 Score = 1765 bits (4571), Expect = 0.0
 Identities = 967/1750 (55%), Positives = 1196/1750 (68%), Gaps = 49/1750 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G T  VEAV F FLTD+E+RR S VKIT+P L+D L  P+P GLYD A+GP D+ S CKS
Sbjct: 7    GATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCKS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQ + HC GH GHI+LVSP YNPL+FN+L+NIL +TCF C  FR+  +EVD   SQLEL
Sbjct: 67   CGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLEL 126

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQAF 816
            I+KG+ + AK+L   +S++  K ++       +    G  +   +    GEN        
Sbjct: 127  IMKGDIIRAKRL---ESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-------- 175

Query: 817  WDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSS 996
            W S Q +EAMSVL + L +K +KC+ C   NPKI+KPTFGWFH+N L+  E R+++IRS 
Sbjct: 176  WTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSV 235

Query: 997  RLDVTHS----GGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRI 1164
              + T+     GGG+     ++ +A         GTA                K+D ++ 
Sbjct: 236  ESETTNDDISLGGGDTTDVEDITSA---------GTA----------------KRDKRKK 270

Query: 1165 KILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSM 1341
            + L+  L +QN   SG LLPSQV+ IL  LWENE  LCSYI DIQ Q     GK  G+SM
Sbjct: 271  EKLSYKLAEQNK-LSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSM 326

Query: 1342 FFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLM 1521
            FFLE I VPPIKFRPP KGGD+VMEHP T+LL K+LQ NI+LG+AH+N ++ SK++SR M
Sbjct: 327  FFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWM 386

Query: 1522 DLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPY 1701
            DLQQS+N+LFD+KTA+ +  +D  +GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPY
Sbjct: 387  DLQQSVNMLFDNKTASGK--RDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY 444

Query: 1702 LSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASK 1881
            L+VNEIGIPPYFALRL+YPERVTPWNV KLR A++NGPE HPGAT Y D VS VKLP   
Sbjct: 445  LAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKG 504

Query: 1882 KMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 2061
            K+    SRKLP+SRG +   G   + EFEGK+VYRHL+DGD+VLVNRQPTLHKPSIMAH+
Sbjct: 505  KLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHI 564

Query: 2062 VRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGD 2241
            VRVLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD
Sbjct: 565  VRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGD 624

Query: 2242 TVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEG 2421
             +R LIQDHIVSA LLT K+TFL+  EF+QLLY SGV   G GS  G   +KV + +SE 
Sbjct: 625  PIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSES 684

Query: 2422 LVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYF-----TGDSY- 2583
             +    P IWKPEPLWTGKQVI+ALL +ITRG  P T E   KIP N+F      G  Y 
Sbjct: 685  EMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYT 744

Query: 2584 KNGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRL 2763
            ++  + +D+  E  LL++KN+LVRGV+DKAQFG +G++HTVQELYGSN AG LLSALSRL
Sbjct: 745  EDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRL 804

Query: 2764 FTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFK-PGQIGPEELQ 2937
            FT FLQ+HGFTCGVDDL++    D +R ++L+  E +G+ VH EF+  K    I P  LQ
Sbjct: 805  FTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQ 864

Query: 2938 LEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTT 3117
            L I+K I S+ E+A  +LD KM + L    +R  S ILK LL+ G+LKP  KNCIS+MTT
Sbjct: 865  LNIEKKIRSNGEAA-LTLDRKMTSNLN---SRTSSGILKKLLSEGILKPSGKNCISLMTT 920

Query: 3118 TGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGL 3297
            +GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLT L
Sbjct: 921  SGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTAL 980

Query: 3298 RPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYY 3477
             PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRDADGSIIQF+Y
Sbjct: 981  HPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHY 1040

Query: 3478 GEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNS-YIEKLPEGLEEEARRFIQEVQ 3654
            GEDGVDVHQTSF+  F AL  N+E +   +  Q   +S YI KLPE LE +A +F     
Sbjct: 1041 GEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPYINKLPEALEGKAEKF----- 1095

Query: 3655 DKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPV 3834
              SK++ +GS                          EQ  F+ L++ KY+S LAQ GEPV
Sbjct: 1096 --SKQRNLGS-------------------------MEQADFLRLMEHKYVSCLAQPGEPV 1128

Query: 3835 GVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQW 4014
            GV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A+  IKTP +TCP    
Sbjct: 1129 GVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHD 1188

Query: 4015 RSKHEVVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVP---- 4173
            +S  + + L  ++KK+TVAD+++SM V    +++   QV   YKL++K+  ++  P    
Sbjct: 1189 KSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTD 1248

Query: 4174 --LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEA---------- 4317
              L D  +TL+  F+RELEDAI+NH+  LS++SGIK F +   S  SN +          
Sbjct: 1249 ITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSES 1308

Query: 4318 ----------DEDDSGVRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXX 4467
                      DED  GV   E                   QKRK Q TDE+         
Sbjct: 1309 EKKGQNNDDDDEDGGGVEDTEG----------YEDLGSDAQKRKLQGTDEVDY------- 1351

Query: 4468 XXXXXXLSEDG-EKGKSDG---DHLEDTENGKDEEAEHSEDN-DGASNADEVMSEAKSSG 4632
                    EDG E+   DG   + +E  E+G D +A  + +N   A+N++ +   +KS  
Sbjct: 1352 --------EDGPEEETHDGELSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPSKSKT 1403

Query: 4633 RKGRATSERIEMPKE-DSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVY 4809
               +   +R +   E  +KK  R I +E KG  FE+ FRFT EPH+LL QIAQ+TAKKV 
Sbjct: 1404 IDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVC 1463

Query: 4810 IKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMH 4989
            I+  GK+ +CK +     E  VI+  K    R +    +     A++ SGV FK+FWE+ 
Sbjct: 1464 IQNFGKVGECKAITC--KESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTFWELE 1521

Query: 4990 DDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTG 5169
            DDLD+  +YSNN++AMLN YGVEAAR TIIREV+ VF  YG+ ++ RHL+LIAD+MTHTG
Sbjct: 1522 DDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTG 1581

Query: 5170 GYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTG 5349
             YRPM+R GSI++S SPF+KM FETA  FIVEAA HG  DNLETPS+RICLGLPVKMGTG
Sbjct: 1582 SYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTG 1641

Query: 5350 CFELMQKLDV 5379
            C +L+QKL++
Sbjct: 1642 CHDLIQKLEI 1651


>dbj|BAT96398.1| hypothetical protein VIGAN_08333300 [Vigna angularis var. angularis]
          Length = 1646

 Score = 1763 bits (4566), Expect = 0.0
 Identities = 952/1747 (54%), Positives = 1188/1747 (68%), Gaps = 48/1747 (2%)
 Frame = +1

Query: 283  TEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKSCG 462
            T  V+AV F FLT ++++R SLVKITNP LL+ L  P+PGGLYDPAMGPLD+ S CKSCG
Sbjct: 9    TNSVKAVAFSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDDKSLCKSCG 68

Query: 463  QRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLELIV 642
            Q +  C GH GHI+LVSP YNPL+FN+L++I+ +TCF C  F++SR+EVD   +QLELI+
Sbjct: 69   QASKLCPGHFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRKEVDMRTTQLELIM 128

Query: 643  KGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQAFWD 822
            KG+ + AK                +L+ ++L++   S   D +     E   E+    W 
Sbjct: 129  KGDIIRAK----------------SLDSINLDEFTHSGDGDESHHCSAEQQGEN----WT 168

Query: 823  SSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRL 1002
            S Q +EAMS+L +FLKR+ +KC+NC  +NPKI+KPTFGWFH+N L+    R+N+IR    
Sbjct: 169  SLQFSEAMSILKKFLKRQYKKCQNCGVVNPKISKPTFGWFHMNVLSADAARANTIRVVES 228

Query: 1003 DVTHS----GGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKI 1170
            ++ +     GGGE     ++                         S+    K+D ++   
Sbjct: 229  EINNDDMSLGGGETTDEEDI-------------------------SSVGAVKRDKRKKGN 263

Query: 1171 LNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFF 1347
            L+  L  QN   SG LLPSQV+ IL  LWENE  LCSYI DIQ Q     GK  G+SMFF
Sbjct: 264  LSHKLAAQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFF 319

Query: 1348 LETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDL 1527
            LE I VPPIKFRPPAK GD VMEHP T+LL K+LQ NI+LG AH+N  + SK++SR MDL
Sbjct: 320  LENIFVPPIKFRPPAKAGDDVMEHPQTVLLTKVLQGNISLGEAHINKLDPSKVLSRWMDL 379

Query: 1528 QQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLS 1707
            QQSIN+LFDSKTA+ Q  +D  +GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+
Sbjct: 380  QQSINLLFDSKTASGQ--RDVAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLA 437

Query: 1708 VNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASKKM 1887
            VNEIGIPPYFA+RL+YPERVTPWN  KLR A++NGP+ HPGAT Y D  +TVKL  S K+
Sbjct: 438  VNEIGIPPYFAIRLSYPERVTPWNAMKLRNAILNGPDSHPGATHYSDKQATVKLQRSPKL 497

Query: 1888 RVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR 2067
               ISRKLPSSRG +   G   + EFEGK+VYRHL+DGD+VLVNRQPTLHKPSIMAH+VR
Sbjct: 498  LAMISRKLPSSRGVILDQGKISDQEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVR 557

Query: 2068 VLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTV 2247
            VLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +
Sbjct: 558  VLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPI 617

Query: 2248 RGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEGLV 2427
            R LIQDHIVSA LLT K+TF+T  EF+QLLY SGV   G GS  G   +KV + +SE  +
Sbjct: 618  RALIQDHIVSASLLTKKDTFITYEEFNQLLYSSGVSMAGVGSFSGKHGQKVFMTNSECEM 677

Query: 2428 ESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYF-----TGDSY-KN 2589
                P IWKPEPLWTGKQVI+ALL +ITRG  P TVE   KIP N+F      G+ Y ++
Sbjct: 678  FLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTVEKNAKIPSNFFKTQVREGERYTRD 737

Query: 2590 GEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFT 2769
               D+D   E  LL++KN LVRGV+DKAQFG +G++HTVQE YGSN AG LLSALSRLFT
Sbjct: 738  KSRDKDLPDEDKLLIYKNNLVRGVVDKAQFGDYGIIHTVQEFYGSNVAGNLLSALSRLFT 797

Query: 2770 IFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFKPG-QIGPEELQLE 2943
             FLQ+HGFTCGVDDL+I+   D +R ++L   E++G+ VH EF+    G  I    +QL 
Sbjct: 798  SFLQMHGFTCGVDDLMIIEEKDVERMNQLSSCEEIGDIVHREFIGVMNGDNIDTTTMQLN 857

Query: 2944 IQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTG 3123
            I+K + S+ E+A   LD KM   ++N  +R  S ILK LL+ G+LKP  KNCIS+MTT+G
Sbjct: 858  IEKKVRSNGEAALTYLDRKM---ISNLNSRTSSGILKELLSEGILKPSGKNCISLMTTSG 914

Query: 3124 AKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRP 3303
            AKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL P
Sbjct: 915  AKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHP 974

Query: 3304 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGE 3483
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRDADGSIIQF+YGE
Sbjct: 975  QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGE 1034

Query: 3484 DGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNS-YIEKLPEGLEEEARRFIQEVQDK 3660
            DGVDVHQTSF+  F+AL  N+E +      Q   +S YI KLP+ L+ +A  F    +D 
Sbjct: 1035 DGVDVHQTSFINKFEALSTNKELVYSNCCRQLDRSSPYINKLPDALKGKAENFF---RDS 1091

Query: 3661 SKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGV 3840
             K++ +G                           ++   ++L++ KY+S LAQ GE VGV
Sbjct: 1092 LKQRNLG--------------------------LKRRDLLKLMEHKYVSCLAQPGESVGV 1125

Query: 3841 IAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRS 4020
            +A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+M AS  IKTP +TCP    +S
Sbjct: 1126 LASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMTCPLRPNKS 1185

Query: 4021 KHEVVSLVSRVKKVTVADLVESMD---VQLSIHPRQVARTYKLIIKVKDTEFVP------ 4173
              + + L  ++KK+TVAD+++SM    VQ+++H  QV   YKL++K+   +  P      
Sbjct: 1186 MEDAICLADKLKKITVADIIKSMKVSVVQVTVHAGQVCSIYKLVMKLYKPKQYPKYTDIT 1245

Query: 4174 LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMSSSISEVSNEA------------ 4317
            L D  DTL+  F+RELEDAIE+H+  LS++SGIK F +   S  SN +            
Sbjct: 1246 LEDWEDTLRVFFVRELEDAIESHMALLSKISGIKKFKTDPQSNYSNSSEDGHGNESESET 1305

Query: 4318 ------DEDDSGVRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXX 4479
                  D+DD GV                       QKRK+Q TDE+             
Sbjct: 1306 KGKNKDDDDDDGV---------VEDTEGYEDLGSDAQKRKRQGTDEVDY----------- 1345

Query: 4480 XXLSEDG-EKGKSDGDHLEDTENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSE 4656
                EDG E+   DG+  E+TEN +D       +ND     D   S+      K +   E
Sbjct: 1346 ----EDGPEEEMHDGEQSEETENDEDGSDVDVNENDNDMTLDANNSQGLEKSSKFKPIVE 1401

Query: 4657 RIEMPKED------SKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKR 4818
            +  + +E       +KK  R + ++ KG+ FE+ F+FT EPH+LLAQIAQ+TAKKV I+ 
Sbjct: 1402 KNSLKREKKKSKAITKKYDRAVFVKAKGMHFEIHFKFTGEPHILLAQIAQRTAKKVCIQN 1461

Query: 4819 SGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDL 4998
             G++ +CK +     E  VI+  +   NR D          A++ SG+ FK+FWE+ DDL
Sbjct: 1462 FGRVGECKAITC--KESGVIYYGEDGRNRDDIPASMKEKIPALQTSGIHFKTFWELQDDL 1519

Query: 4999 DLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYR 5178
            D+  +YSN+++AML+ YGVEAAR TIIREV+ VF  YG+ ++ RHL+LIAD+MTH+GGY 
Sbjct: 1520 DVRYIYSNSVHAMLSAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYS 1579

Query: 5179 PMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFE 5358
            PM+R GSI++  SPF+KM FETASKFIVEAA HG  DNLETPSSRICLGLPVK+GTGC +
Sbjct: 1580 PMNRTGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKVGTGCHD 1639

Query: 5359 LMQKLDV 5379
            L+QKL++
Sbjct: 1640 LIQKLEI 1646


>ref|XP_014513718.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2 [Vigna
            radiata var. radiata]
          Length = 1647

 Score = 1761 bits (4561), Expect = 0.0
 Identities = 952/1739 (54%), Positives = 1188/1739 (68%), Gaps = 40/1739 (2%)
 Frame = +1

Query: 283  TEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKSCG 462
            T  V+AV F FLT ++++R SLVKITNP LL+ L  P+PGGLYDPAMGPLD+ SPCKSCG
Sbjct: 9    TNSVKAVAFSFLTSDDLQRSSLVKITNPILLNALLHPVPGGLYDPAMGPLDDKSPCKSCG 68

Query: 463  QRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLELIV 642
            Q +  C GH GHI+LVSP YNPL+FN+L++I+ +TCF C  F++SRREVD   +QLELI+
Sbjct: 69   QASKLCPGHFGHIELVSPVYNPLMFNILSSIIQRTCFSCYHFQASRREVDMRTTQLELIM 128

Query: 643  KGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGENHYEDKQAFWD 822
            KG+ + AK L       D   ++      D ++N G      +V   GEN        W 
Sbjct: 129  KGDIIRAKSL-------DSTNLDEFTHSGDGDENHGC-----SVEQQGEN--------WT 168

Query: 823  SSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRSSRL 1002
            S Q +E MSVL +FLKR+ +KC+NC  +NPKI+KPTFGWFHVN L+    R+N IR    
Sbjct: 169  SVQFSETMSVLKKFLKRQYKKCQNCGVVNPKISKPTFGWFHVNDLSADASRANIIRVLES 228

Query: 1003 DVTHS----GGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKI 1170
            ++ +     GGGE     ++                         S+ +  K+D ++   
Sbjct: 229  EINNDDMSLGGGETTDEGDI-------------------------SSVEAVKRDKRKKGN 263

Query: 1171 LNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFF 1347
            L+  L  QN    G LLPSQV+ IL+ LWENE  LCSYI DIQ Q     GK  G+SMFF
Sbjct: 264  LSHKLAAQNK-LPGSLLPSQVKYILKCLWENEARLCSYISDIQDQGF---GKKAGHSMFF 319

Query: 1348 LETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDL 1527
            LE I VPPIKFRPPAK GD VMEHP T+LL K+LQ NI+LG+AH+N  + SK++SR MDL
Sbjct: 320  LENIFVPPIKFRPPAKAGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDSSKVLSRWMDL 379

Query: 1528 QQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLS 1707
            QQS+N+LFDSKTA+ Q  +D  +GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+
Sbjct: 380  QQSVNLLFDSKTASGQ--RDVGAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLA 437

Query: 1708 VNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASKKM 1887
            VNEIGIPPYFALRL+YPERVTPWN  KLR A++NGP+ HPGAT Y D  +TVKL  + K+
Sbjct: 438  VNEIGIPPYFALRLSYPERVTPWNAMKLRNAILNGPDSHPGATHYSDKQATVKLQRNPKL 497

Query: 1888 RVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVR 2067
               ISRKLPSSRG +   G   + EFEGK+VYRHL+DGD+VLVNRQPTLHKPSIMAH+VR
Sbjct: 498  LSMISRKLPSSRGVILDQGKISDQEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVR 557

Query: 2068 VLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTV 2247
            VLKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +
Sbjct: 558  VLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPI 617

Query: 2248 RGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEGLV 2427
            R LIQDHIVSA LLT K+TF+T  EF+QLLY SGV   G GS  G   +KV + +SE  +
Sbjct: 618  RALIQDHIVSASLLTKKDTFITYEEFNQLLYSSGVSMAGVGSFSGKHGQKVFMTNSECEM 677

Query: 2428 ESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYF-----TGDSY-KN 2589
                P IWKPEPLWTGKQVI+ALL +ITRG  P TVE   KIP N+F      G+ Y ++
Sbjct: 678  ILFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTVEKNAKIPSNFFKTQVREGERYTRD 737

Query: 2590 GEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSRLFT 2769
               D+D   E  LL++ N LVRGV+DKAQFG +G++HTVQE YGSN AG LLSALSRLFT
Sbjct: 738  KSRDKDLPDEDKLLIYNNNLVRGVVDKAQFGDYGIIHTVQEFYGSNVAGNLLSALSRLFT 797

Query: 2770 IFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFKPG-QIGPEELQLE 2943
             FLQ+HGFTCGVDDL+I+   D +R ++L   E++G+ VH EF+    G  I    +QL 
Sbjct: 798  SFLQMHGFTCGVDDLMIIEEKDVERMNQLSSCEEIGDIVHREFIGVMNGDNIDTTTMQLN 857

Query: 2944 IQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTG 3123
            I+K + S+ E+A   LD KM   ++N  +R  S ILK LL+ G+LKP  KNCIS+MTT+G
Sbjct: 858  IEKKVRSNGEAALTYLDRKM---ISNLNSRTSSGILKELLSEGILKPSGKNCISLMTTSG 914

Query: 3124 AKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTGLRP 3303
            AKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL P
Sbjct: 915  AKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHP 974

Query: 3304 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGE 3483
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRDADGSIIQF YGE
Sbjct: 975  QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFLYGE 1034

Query: 3484 DGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNS-YIEKLPEGLEEEARRFIQEVQDK 3660
            DGVDVHQTSF+  F+AL  N+E +      Q   +S YI KLP+ L+ +A  F    +D 
Sbjct: 1035 DGVDVHQTSFINKFEALSTNKELVYSNCCRQLDRSSPYINKLPDTLKGKAENFF---RDS 1091

Query: 3661 SKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEPVGV 3840
             K++ +G                           ++  F++L++ KY+S LAQ GE VGV
Sbjct: 1092 LKQRNLG--------------------------LKRRDFLKLMEHKYVSCLAQPGESVGV 1125

Query: 3841 IAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQWRS 4020
            +A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+M AS  IKTP +TCP    +S
Sbjct: 1126 LASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAASRDIKTPFMTCPLRPNKS 1185

Query: 4021 KHEVVSLVSRVKKVTVADLVESMD---VQLSIHPRQVARTYKLIIKVKDTEFVP------ 4173
              + + L  ++KK+TVAD+++SM    VQ+++H  Q+   YKL++K+   +  P      
Sbjct: 1186 MEDAICLADKLKKITVADIIKSMKVSVVQVTVHAGQICSIYKLVMKLYKPKQYPKYTDIT 1245

Query: 4174 LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIK--------NFMSSSISEVSNEADEDD 4329
            L D  DTL+  F+RELEDAIE+H+  LS++SGIK        N+  SS ++ SNE++ + 
Sbjct: 1246 LEDWEDTLRVSFVRELEDAIESHMALLSKISGIKKFKTDPQSNYSHSSKNDHSNESESET 1305

Query: 4330 SGVR--TQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDG- 4500
             G      +                   QKRK+Q  DE+                 EDG 
Sbjct: 1306 KGKNKDDDDDEDGVVEDTEGYEDLGSDAQKRKRQGIDEVDY---------------EDGP 1350

Query: 4501 EKGKSDGDHLEDTENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKED 4680
            E+   DG+  E+TEN +D       +ND     D   SE      K +   E+  + +E 
Sbjct: 1351 EEEIHDGEQSEETENDEDGSDVDVNENDNDMTLDANNSEGLEKSSKFKPIVEKNSLKREK 1410

Query: 4681 ------SKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCK 4842
                  +KK  R + ++ KG+ FE+ F+FT EPH+LLAQIAQ+ AKKV I+  G++ +CK
Sbjct: 1411 KKSKAITKKYDRAVFVKAKGMHFEIHFKFTGEPHILLAQIAQRAAKKVCIQNFGRVGECK 1470

Query: 4843 MVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSN 5022
             +     E  VI+  +   NR D          A++ SG+ FK+FWE+ DDLD+  +YSN
Sbjct: 1471 AITC--KESGVIYYGEDGRNRDDIPASVKEKIQALQTSGIHFKTFWELQDDLDVRYIYSN 1528

Query: 5023 NINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSI 5202
            +++AML+ YGVEAAR TIIREV+ VF  YG+ ++ RHL+LIAD+MTH+GGY PM+R GSI
Sbjct: 1529 SVHAMLSVYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYSPMNRTGSI 1588

Query: 5203 SESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            ++  SPF+KM FETASKFIVEAA HG  DNLETPSSRICLGLPVK+GTGC +L+QKL++
Sbjct: 1589 ADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKVGTGCHDLIQKLEI 1647


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score = 1752 bits (4537), Expect = 0.0
 Identities = 970/1778 (54%), Positives = 1198/1778 (67%), Gaps = 77/1778 (4%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G T  V++V F FLTDEEV +HS VKIT+  LLD L+KP+PGGLYDPAMGPL +  PCK+
Sbjct: 6    GATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE-PCKT 64

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQR+ +CTGHCGHIDL+SP YNPLLFN L+ +L +TCF C  FR+   +V+  VSQLEL
Sbjct: 65   CGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLEL 124

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDSTVFSDGE--NHYEDKQ 810
            I+KG+ V AK+L           +E +L     ED+ GS  S ST+ S     N+ + KQ
Sbjct: 125  IIKGDVVGAKRLD------SFSPIEASLP----EDSDGSSESCSTIHSGAPHPNNEQSKQ 174

Query: 811  AFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIR 990
            + W S QL+EAMS+LN FLK + +KC+NC   NP I KPTFGWFH   L+N  IRSN I+
Sbjct: 175  SEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIK 234

Query: 991  SSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDA----- 1155
               ++    G  E+                          + A D+TK P+ K++     
Sbjct: 235  QQTIEGPFGGAFEE-------------------------LIDAEDATKSPNNKESATNRN 269

Query: 1156 -KRIKILNQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKAT 1329
             K  + L      Q +  S  LLPS+  DIL+ LW+NE  LCS + DIQQQ   +  K  
Sbjct: 270  LKEHQKLQHQFTSQKDALSSQLLPSEAMDILKLLWKNEAGLCSLMSDIQQQG--VGKKKA 327

Query: 1330 GYSMFFLETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKII 1509
            G+SMFFL T+LVPPIKFRPP KGGDSVMEHP ++LL K+L+ N +L +AH +N +   I 
Sbjct: 328  GHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSLADAHRSN-DFPLIA 386

Query: 1510 SRLMDLQQSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVIS 1689
             R ++LQQSINVLFDS TA  + QKD  SGICQ LEKKEG+FRQKMMGKRVN+ACRSVIS
Sbjct: 387  RRWLELQQSINVLFDSNTA--KGQKDVISGICQILEKKEGMFRQKMMGKRVNYACRSVIS 444

Query: 1690 PDPYLSVNEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKL 1869
            PDPYL VNEIG+PP FA++LTYPERVTPWNV KLR AVINGPE HPGAT YVD +ST KL
Sbjct: 445  PDPYLDVNEIGVPPCFAVKLTYPERVTPWNVAKLRNAVINGPESHPGATHYVDKLSTTKL 504

Query: 1870 PASKKMRVAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSI 2049
            P ++KMRV+++RKL         SG + + E+EGKIVYRHLQDGDIVLVNRQPTLHKPSI
Sbjct: 505  PPNRKMRVSVARKL---------SGRSFDYEYEGKIVYRHLQDGDIVLVNRQPTLHKPSI 555

Query: 2050 MAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVP 2229
            MAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVHFPQDE+SRAE YNIVNAN QY+ P
Sbjct: 556  MAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEGYNIVNANNQYVRP 615

Query: 2230 TRGDTVRGLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLV 2409
            + G+ +R LIQDHI+SAVLLT K+TFLT  E  QLLY SGV    P S  G   RKV  +
Sbjct: 616  SNGEPIRSLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNARPTSFSGRAGRKVIFL 675

Query: 2410 DSEGLVESLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYFTGDSYKN 2589
              E  +E+L P I KP  LW+GKQ+ITA+LNHITRG  P TVE  GK+  ++F     KN
Sbjct: 676  SYEDEIETLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKGGKLSYDFFKS-KIKN 734

Query: 2590 GEED----------------------EDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHT 2703
            G+                        E Q  +  +++++N LV+GVIDKAQFG++GLVHT
Sbjct: 735  GKSSNGEKVGVSKPMKEKESGKVNPKEKQLEDDKMIIFRNVLVQGVIDKAQFGEYGLVHT 794

Query: 2704 VQELYGSNSAGILLSALSRLFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEE 2880
            VQEL+G+ +AG LLS  SRLFT +LQ+HGFTCGVDDL+I    D +RK +LE  E  GE+
Sbjct: 795  VQELFGAKAAGTLLSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDERKKQLENCEKCGEQ 854

Query: 2881 VHCEFVKFKPG--QIGPEELQLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILK 3054
            +H +F+  K    +I P ELQ  I+K I SD ESA   LD +M N+L +K +   S ++ 
Sbjct: 855  IHRKFIGIKDENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNELNSKTS---SGVIN 911

Query: 3055 HLLTAGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCF 3234
             LL+ GLLKP  KNCIS+MTT+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF
Sbjct: 912  ELLSEGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCF 971

Query: 3235 PPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLES 3414
             PWD+ +RAGG+I DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 
Sbjct: 972  HPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLEC 1031

Query: 3415 LKVCYDYTVRDADGSIIQFYYGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNSY 3594
            L++ YD+TVRDADGSI+QFYYGEDGVDVHQT F+  F+AL  NRE I +K      FN+Y
Sbjct: 1032 LRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAKFEALAANREIIYEKSDELGTFNAY 1091

Query: 3595 IEKLPEGLEEEARRFIQEVQDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNK 3774
            I +LPE L+E+A  F++ +                    K + + H   K++++   ++ 
Sbjct: 1092 ISELPEALKEKAEIFLRNI-------------------AKEQSSLHDYTKDRSSNLVEHD 1132

Query: 3775 FIELVKQKYLSSLAQSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 3954
            F +L+KQK+  SLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI
Sbjct: 1133 FYKLLKQKFFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEI 1192

Query: 3955 LMTASDVIKTPILTCPFSQWRSKHEVVSLVSRVKKVTVADLVESMDVQL---SIHPRQVA 4125
            LMTAS  IKTPI+TCP  + R+K +   L  ++KKVTVAD++ESM+V +   ++    + 
Sbjct: 1193 LMTASADIKTPIMTCPLQEGRTKEDAERLSDKLKKVTVADIIESMEVSVMPFAVQNDGIC 1252

Query: 4126 RTYKLIIKVKDTEFVPL-ADI-----HDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMS 4287
            R YKL +K+      P  ADI      +TL+ +F+RELEDAI+NH++ LS++SGIKNF+ 
Sbjct: 1253 RIYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLK 1312

Query: 4288 SSISEVSNEADEDDSGVRTQEA--XXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXX 4461
             S S    EA+ED SG  + E                    VQKRKQQ TDEM       
Sbjct: 1313 ESHSGTPIEAEEDVSGNISHEGENDDDSDDEGEEADDLGLDVQKRKQQVTDEM------D 1366

Query: 4462 XXXXXXXXLSED-----GEKGKSDGDHLEDTENGKDEEAEHSE----DNDG--------- 4587
                    L+ED     G +  S  +   DTE   D+E+E S     DND          
Sbjct: 1367 YDDGSEGLLNEDEGDLSGSQAPSGSE--SDTEPA-DKESEISNTGMVDNDSEYFEKPSHL 1423

Query: 4588 --------------ASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEVKGL 4725
                          +S+  E+ S+ KS+ +K +    +    K   K   R I +E KGL
Sbjct: 1424 GNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGL 1483

Query: 4726 SFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNR 4905
             FE+  +FT EPH+LLA+IAQKTAKKV I+  GK+ +C++   D  E  VI+  K    R
Sbjct: 1484 HFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRR 1541

Query: 4906 GDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIRE 5085
             D E  +     A+   GVDF +FW+M D LD+  +YSN+I+ ML  YGVEAAR TIIRE
Sbjct: 1542 IDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIRE 1601

Query: 5086 VKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 5265
            +K VF+ YG+ ++ RHLSLIADYMTHTG YRPMSR G ISES+SP  KMSFETASKFIVE
Sbjct: 1602 IKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVE 1661

Query: 5266 AATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 5379
            A  H   DNLE PS+R+CLGLPVKMGTG F+LMQKL++
Sbjct: 1662 ATLHREVDNLEAPSARVCLGLPVKMGTGSFDLMQKLEI 1699


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1746 bits (4522), Expect = 0.0
 Identities = 960/1744 (55%), Positives = 1183/1744 (67%), Gaps = 43/1744 (2%)
 Frame = +1

Query: 277  GTTEVVEAVRFGFLTDEEVRRHSLVKITNPNLLDILEKPIPGGLYDPAMGPLDESSPCKS 456
            G T  V+AV F FLT +E+ R S VKITNP LL+ L  P+ GGLYDPA+GPLD+ S CKS
Sbjct: 7    GVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDDKSLCKS 66

Query: 457  CGQRAYHCTGHCGHIDLVSPAYNPLLFNMLNNILNKTCFQCLQFRSSRREVDNCVSQLEL 636
            CGQ + HC GH GHI+LVSP YNPL+FN+L++IL +TCF C  F +SR+EV+   SQ EL
Sbjct: 67   CGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMRTSQFEL 126

Query: 637  IVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSDST-VFSDGENHYEDKQA 813
            I+KG+ + AK L                 I+  E N      +S  V   GEN       
Sbjct: 127  IMKGDIIRAKSLD---------------SIISDESNHSGDGDESQGVEQLGEN------- 164

Query: 814  FWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNRLANTEIRSNSIRS 993
             W S Q +EAMSVL +FL RK +KC+NC  +NP+I+KPTFGWFH+N L++ E R+N++R+
Sbjct: 165  -WSSLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRA 223

Query: 994  SRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTASDSTKKPSKKDAKRIKIL 1173
                            SE +N  D S      T E +  +T++ + K+  +K  K    L
Sbjct: 224  LE--------------SETIN-DDMSLGGGETTEEED--ITSTGTAKRDKRKKGK----L 262

Query: 1174 NQGLEDQNNYFSGPLLPSQVRDILRRLWENEP-LCSYIYDIQQQQCKLSGKATGYSMFFL 1350
            +  L  QN   SG LLPSQV+ IL  LWENE  LCSYI DIQ Q     GK  G+SMFFL
Sbjct: 263  SSKLAAQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFL 318

Query: 1351 ETILVPPIKFRPPAKGGDSVMEHPHTLLLGKLLQSNIALGNAHVNNAERSKIISRLMDLQ 1530
            E I VPPIKFRPP KGGD VMEHP T+LL K+LQ NI+LG+AH+N  + SK++SR MDLQ
Sbjct: 319  ENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQ 378

Query: 1531 QSINVLFDSKTATSQAQKDGTSGICQYLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSV 1710
            QS+N+LFD+KT+    Q +  +GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+V
Sbjct: 379  QSVNLLFDNKTS---GQGEVAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 435

Query: 1711 NEIGIPPYFALRLTYPERVTPWNVGKLRGAVINGPEIHPGATTYVDSVSTVKLPASKKMR 1890
            NEIGIPPYFALRL+YPERVTPWNV  LR A++NGP+ HPGAT Y D  +TVKLP + K+ 
Sbjct: 436  NEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLL 495

Query: 1891 VAISRKLPSSRGALTQSGNNDELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 2070
              ISRKLPSSRG +   G   + EFEGKIVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRV
Sbjct: 496  SFISRKLPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRV 555

Query: 2071 LKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVR 2250
            LKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R
Sbjct: 556  LKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIR 615

Query: 2251 GLIQDHIVSAVLLTMKNTFLTRSEFSQLLYGSGVFARGPGSLPGNLSRKVSLVDSEGLVE 2430
             LIQDHIVSA LLT K+TF+T   F QLLY SGV   G GS  G   +KV + +SE  + 
Sbjct: 616  ALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMF 675

Query: 2431 SLLPTIWKPEPLWTGKQVITALLNHITRGRAPCTVENQGKIPKNYF----------TGDS 2580
               P IWKPEPLWTGKQVI+ALL +ITR   P TVE   KIP N+F          T D 
Sbjct: 676  LFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDK 735

Query: 2581 YKNGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGSNSAGILLSALSR 2760
             +N  E +D   E  LL++KN+LVRGV+DKAQFG +G++HTVQELYGS  AG LLSALSR
Sbjct: 736  SRNKVEPDD---EDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSR 792

Query: 2761 LFTIFLQIHGFTCGVDDLIILPHYDAQRKDKLEG-EDVGEEVHCEFVKFKPGQ-IGPEEL 2934
            LFT FLQ+HGFTCGVDDL+I    D +R D+L   E++G+ VH EF+       I P  L
Sbjct: 793  LFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITL 852

Query: 2935 QLEIQKVICSDRESATASLDMKMKNKLTNKLTREGSQILKHLLTAGLLKPFPKNCISVMT 3114
            QL I+K I S+ E+A   LD KM + L    +R  S ILK LL+ G+LKP  KNCIS+MT
Sbjct: 853  QLNIEKKIRSNGEAALTYLDRKMTSNLN---SRTSSGILKDLLSDGILKPSGKNCISLMT 909

Query: 3115 TTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGFITDRFLTG 3294
            T+GAKGS VNFQQIS++LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTG
Sbjct: 910  TSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTG 969

Query: 3295 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFY 3474
            L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKVCYD+TVRDADGSIIQF+
Sbjct: 970  LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFH 1029

Query: 3475 YGEDGVDVHQTSFLKNFKALEDNRETICQKFQNQRQFNS-YIEKLPEGLEEEARRFIQEV 3651
            YGEDGVDVH TSF+  F+AL  N+E +      Q   +S YI KLP+ L+E+A  F    
Sbjct: 1030 YGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRSSPYINKLPDALKEKAENFF--- 1086

Query: 3652 QDKSKEKQIGSAIEQLHKKRKGRKNKHLSNKEKATEKEQNKFIELVKQKYLSSLAQSGEP 3831
            +D  K++ +GS                          ++ +F++L++ KY+S LAQ GE 
Sbjct: 1087 RDSLKQRNLGSL-------------------------KRAEFLKLMEHKYVSCLAQPGES 1121

Query: 3832 VGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFSQ 4011
            VGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+M A+  IKTP +TCP   
Sbjct: 1122 VGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAAARDIKTPFMTCPLRS 1181

Query: 4012 WRSKHEVVSLVSRVKKVTVADLVESMDVQ---LSIHPRQVARTYKLIIKVKDTEFVP--- 4173
             +S  E + L  ++KK+TVAD+++SM V    +S+   QV   YKL++K+   +  P   
Sbjct: 1182 NKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGGQVCSIYKLVMKLYKPKQYPKYS 1241

Query: 4174 ---LADIHDTLKSVFLRELEDAIENHVIFLSRVSGIKNFMS------------------S 4290
               L D  DTL+  F+RELEDAIENH+  LS++SGIK F +                  S
Sbjct: 1242 DITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHGNGSES 1301

Query: 4291 SISEVSNEADEDDSGVRTQEAXXXXXXXXXXXXXXXXXVQKRKQQATDEMXXXXXXXXXX 4470
                 SN+ D+DD  V   E                   QKRK+Q TDE+          
Sbjct: 1302 ETKGKSNDDDDDDDVVEDTEG----------YEDLGSDAQKRKRQGTDEVDY-------- 1343

Query: 4471 XXXXXLSEDG-EKGKSDGDHLEDTENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRA 4647
                   EDG E+   DG   E+ EN +D   ++   +   S   + +SE+KS   K   
Sbjct: 1344 -------EDGPEEETHDGVLSEEIENDEDNVDDNMTLDASDSEGLDELSESKSIFEKDSL 1396

Query: 4648 TSERIEMPKEDSKKIRRGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGK 4827
              E+ +  +  ++K  R + ++ KG+ F++ F+FT EP +LLA+IA ++AKKV I+ SG+
Sbjct: 1397 KREK-KKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEIALRSAKKVCIQNSGR 1455

Query: 4828 ISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLS 5007
            + +CK V           +D +K  R D          A++ SGV FK+FWE+ DDLD+ 
Sbjct: 1456 VGECKAVTCKESGVMYYGEDSRK--RDDIPASVKEKIPALQTSGVHFKTFWELQDDLDVR 1513

Query: 5008 RLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMS 5187
             +YSNN++AMLN YGVEAAR TIIREV+ VF  YG+ ++ RHL+LIAD+MTH+GGYRPM+
Sbjct: 1514 YIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMN 1573

Query: 5188 RHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQ 5367
            R+GSI++  SPF+KM FETASKFIVEAA HG  DNLETPSSRICLGLPVKMGTGC +L+Q
Sbjct: 1574 RNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKMGTGCHDLIQ 1633

Query: 5368 KLDV 5379
            KL++
Sbjct: 1634 KLEI 1637