BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00005051
         (2390 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  1309   0.0  
ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III s...  1272   0.0  
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...  1271   0.0  
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1270   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1264   0.0  
ref|XP_015056027.1| PREDICTED: DNA-directed RNA polymerase III s...  1263   0.0  
ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III s...  1263   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1248   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1246   0.0  
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...  1241   0.0  
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...  1241   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1240   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1240   0.0  
ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III s...  1239   0.0  
gb|EYU26925.1| hypothetical protein MIMGU_mgv1a000512mg [Erythra...  1239   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1231   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1229   0.0  
ref|XP_015578752.1| PREDICTED: DNA-directed RNA polymerase III s...  1228   0.0  
gb|EEF36800.1| DNA-directed RNA polymerase III subunit, putative...  1228   0.0  
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...  1220   0.0  

>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 654/734 (89%), Positives = 674/734 (91%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSITVGLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG
Sbjct: 419  KDSITVGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 478

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+DEGPLISLC+SLGVEDLELLS
Sbjct: 479  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLS 538

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELHMPNSYLII NGLILGKHRRPQ+FA AMRKLRR+GKIGEFVSIFVNEKQ  VYIAS
Sbjct: 539  GEELHMPNSYLIILNGLILGKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIAS 598

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKELKDGVR FDSFLKEGLIEYLDVNEENNALIALYE
Sbjct: 599  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYE 658

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            ENA E TTHIEIEPFTILG++AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 659  ENANERTTHIEIEPFTILGIIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDT 718

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            LIYLLVYPQRPLLTTRTIELV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 719  LIYLLVYPQRPLLTTRTIELVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 778

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIV+KKM+AVSQKYENGTSDRI+RP R G +AE  QILDDDGLAAPG+IIR  D+YI K
Sbjct: 779  RCIVIKKMTAVSQKYENGTSDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINK 838

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TRGPV     L DSAY  S+QTYKGP+GETPVVDRV L SDRNNNLCIKFMIRHT
Sbjct: 839  ESPIVTRGPVTSPMGLPDSAYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHT 898

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCG IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 899  RRPELGDKFSSRHGQKGVCGNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 958

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHADKVE I                            YIF
Sbjct: 959  GKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIF 1018

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1019 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1078

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLL QEL
Sbjct: 1079 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQEL 1138

Query: 2087 QSMNIIPRLKLTEA 2128
            Q+MNIIPRLKLTEA
Sbjct: 1139 QAMNIIPRLKLTEA 1152


>ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            tomentosiformis]
          Length = 1155

 Score = 1272 bits (3292), Expect = 0.0
 Identities = 635/734 (86%), Positives = 661/734 (90%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSITVG+ER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 422  KDSITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 481

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P+ISLC+ LGVEDLE LS
Sbjct: 482  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEHPIISLCYCLGVEDLEQLS 541

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EELHMP+SYLII NGLILGKHR PQ+FANAMRKLRRAGKIGEF+SIFVNEKQR VYIAS
Sbjct: 542  AEELHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIAS 601

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKE HMKEL+DGVR FDSFLK+GLIEYLDVNEENN+LIALYE
Sbjct: 602  DGGRVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLKDGLIEYLDVNEENNSLIALYE 661

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            + A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 662  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDT 721

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            LIYLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 722  LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 781

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SA   KYEN TSDRII+P R G +AE  QILD+DGLA+PG+IIR  D+YI K
Sbjct: 782  RCIVMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINK 841

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TR PV     L DSAY  S+QTYKGPEGETPVVDRV L SD+NNNLCIKFMIRHT
Sbjct: 842  ESPTVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHT 901

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 902  RRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 961

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHAD V+TI                            YIF
Sbjct: 962  SKAGVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIF 1021

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1022 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1081

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYN+KLKTGICS CKNGENISTMKLPYACKLL QEL
Sbjct: 1082 IYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQEL 1141

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1142 QSMNIVPRLKLAEA 1155


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score = 1271 bits (3290), Expect = 0.0
 Identities = 634/734 (86%), Positives = 662/734 (90%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSITVG+ER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 422  KDSITVGMERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 481

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P+ISLC+ LGVEDLE LS
Sbjct: 482  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEQPIISLCYCLGVEDLEQLS 541

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EELHMP+SYLII NGLILGKHR PQ+FANAMRKLRRAGKIGEF+SIFVNEKQR VYIAS
Sbjct: 542  AEELHMPSSYLIILNGLILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIAS 601

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKE HMKEL+DGVR FDSFL++GLIEYLDVNEENN+LIALYE
Sbjct: 602  DGGRVCRPLVIADKGVSRIKEQHMKELRDGVRNFDSFLRDGLIEYLDVNEENNSLIALYE 661

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            + A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 662  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDT 721

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            LIYLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 722  LIYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 781

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SA   KYEN TSDRII+P R G +AE  QILD+DGLA+PG+IIR  D+YI K
Sbjct: 782  RCIVMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINK 841

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TR PV     L DSAY  S+QTYKGPEGETPVVDRV L SD+NNNLCIKFMIRHT
Sbjct: 842  ESPTVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHT 901

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 902  RRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 961

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHAD V+TI                            YIF
Sbjct: 962  SKAGVSCGRFHYGSAFGEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIF 1021

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1022 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1081

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYN+KLKTGICS CKNGENISTMKLPYACKLL QEL
Sbjct: 1082 IYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQEL 1141

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL+EA
Sbjct: 1142 QSMNIVPRLKLSEA 1155


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1270 bits (3286), Expect = 0.0
 Identities = 626/734 (85%), Positives = 668/734 (91%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +DSITVGLER+LSTGNWDVKRFRMHRKGM+QVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 424  RDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSG 483

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLISLC+SLGVEDLELLS
Sbjct: 484  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLS 543

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+LIIFNGLILGKHRRPQ+FANA+RKLRRAGKIGEFVS+FVNEKQ CVYIAS
Sbjct: 544  GEELHTPNSFLIIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIAS 603

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRP+VIADKG SRIKEHHMKEL DGVRTFD FL++GLIEYLDVNEENNALIALYE
Sbjct: 604  DGGRVCRPVVIADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 663

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
             +AK  TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+
Sbjct: 664  ADAKPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDS 723

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 724  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 783

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SAV+Q+YEN  SDRI+RP + G+DAE  QILDDDGLAAPG+II+  D+YI K
Sbjct: 784  RCIVMKKFSAVNQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINK 843

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP IT+GP+     L DSAY  S+QT+KGPEGE  VVDRV L SD+N+NLCIKF+IRHT
Sbjct: 844  ESPIITKGPLISPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHT 903

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 904  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 963

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHADKVETI                            YIF
Sbjct: 964  GKAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIF 1023

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1024 MGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1083

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            I+ERLM+SSDPFEVQVCR CGLLGYYN KLK GICSTCKNG+NISTMKLPYACKLLFQEL
Sbjct: 1084 IFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQEL 1143

Query: 2087 QSMNIIPRLKLTEA 2128
            Q+MN++PRLKLTEA
Sbjct: 1144 QAMNVVPRLKLTEA 1157


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit 2-like [Solanum
            tuberosum] gi|565393087|ref|XP_006362215.1| PREDICTED:
            DNA-directed RNA polymerase III subunit 2-like [Solanum
            tuberosum]
          Length = 1153

 Score = 1264 bits (3270), Expect = 0.0
 Identities = 628/734 (85%), Positives = 659/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT+GLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 420  KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 479

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLC+ LGVEDLE LS
Sbjct: 480  PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 539

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EELHMP SYLI  NGLILGKH+ PQ+FANAMR+LRRAGKIGEFVSIFVNEKQRCVYIAS
Sbjct: 540  PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIAS 599

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHM+EL+DGVR FDSFLK+GLIEYLDVNEENN LIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYE 659

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            + A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD 
Sbjct: 660  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 719

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGN---DAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SA+ QKYENGTSDRII+P R     D  QILDDDG+AAPG+ IRN D+YI K
Sbjct: 780  RCIVMKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINK 839

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TR P+     L DSAY +S+QTYKGPEGET VVDRV L SDRNNNL IKFMIRHT
Sbjct: 840  ESPTVTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHT 899

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 900  RRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 959

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHAD V++I                            YIF
Sbjct: 960  SKAGVSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIF 1019

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1020 MGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1079

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYN+KLKTGICS CKNGENISTMKLPYACKLLFQEL
Sbjct: 1080 IYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQEL 1139

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1140 QSMNIVPRLKLAEA 1153


>ref|XP_015056027.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Solanum
            pennellii] gi|970058641|ref|XP_015056028.1| PREDICTED:
            DNA-directed RNA polymerase III subunit 2 [Solanum
            pennellii]
          Length = 1153

 Score = 1263 bits (3268), Expect = 0.0
 Identities = 629/734 (85%), Positives = 657/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT+GLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 420  KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 479

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLC+ LGVEDLE LS
Sbjct: 480  PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 539

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EELHMP SYLI  NGLILGKH+ PQ+FANAMR+LRRAGK+GEFVSIFVNEKQRCVYIAS
Sbjct: 540  PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIAS 599

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHM EL+DGVR FDSFLK+GLIEYLDVNEENN LIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMSELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYE 659

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            + A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD 
Sbjct: 660  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 719

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGN---DAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SA+ QKYENGTSDRII+P R     D  QILDDDG+AAPG+ IRN D+YI K
Sbjct: 780  RCIVMKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINK 839

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TR PV     L DSAY SSKQTYKGPEGET VVDRV L SDRNNNL IKFMIRHT
Sbjct: 840  ESPTVTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHT 899

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 900  RRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 959

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHAD V+ I                            YIF
Sbjct: 960  SKAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIF 1019

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1020 MGPIYYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1079

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYN+KLKTGICS CKNGENISTMKLPYACKLLFQEL
Sbjct: 1080 IYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQEL 1139

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1140 QSMNIVPRLKLAEA 1153


>ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum] gi|723738099|ref|XP_010312067.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum]
          Length = 1153

 Score = 1263 bits (3267), Expect = 0.0
 Identities = 628/734 (85%), Positives = 658/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT+GLER+LSTGNWDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSG
Sbjct: 420  KDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSG 479

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLC+ LGVEDLE LS
Sbjct: 480  PRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLS 539

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EELHMP SYLI  NGLILGKH+ PQ+FANAMR+LRRAGK+GEFVSIFVNEKQRCVYIAS
Sbjct: 540  PEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIAS 599

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHM+EL+DG+R FDSFLK+GLIEYLDVNEENN LIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYE 659

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            + A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD 
Sbjct: 660  KEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDG 719

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGN---DAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMKK SA+ QKYENGTSDRII+P R     D  QILDDDG+AAPG+ IRN D+YI K
Sbjct: 780  RCIVMKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINK 839

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP +TR PV     L DSAY SSKQTYKGPEGET VVDRV L SDRNNNL IKFMIRHT
Sbjct: 840  ESPTVTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHT 899

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 900  RRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 959

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHAD V+ I                            YIF
Sbjct: 960  SKAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIF 1019

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMV+DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASML
Sbjct: 1020 MGPIYYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1079

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            IYERLMISSDPFEVQVCRKCGLLGYYN+KLKTGICS CKNGENISTMKLPYACKLLFQEL
Sbjct: 1080 IYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQEL 1139

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1140 QSMNIVPRLKLAEA 1153


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1248 bits (3228), Expect = 0.0
 Identities = 612/734 (83%), Positives = 660/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +DSITVGLER+LSTGN+DVKRF+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSG
Sbjct: 416  RDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSG 475

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+EGPLISLC+ LGVEDLELLS
Sbjct: 476  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLS 535

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+IFNGLILGKHRRP+ FA+ MRKLRRAGKIGEFVS+FVNEKQRCVYIAS
Sbjct: 536  GEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIAS 595

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKG+SRIKEHHMKEL DGVR+FD FL+EGLIEYLDVNEENNALIALYE
Sbjct: 596  DGGRVCRPLVIADKGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYE 655

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
             +A   TTHIEIEPFTILGV+AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+
Sbjct: 656  GDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDS 715

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 716  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 775

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIV+KK +A++QKY N TSDRI+RPDR   G++  QILDDDGLAAPG+II+  DVYI K
Sbjct: 776  RCIVVKKYTAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINK 835

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP  TRG +       DS Y S++QTYKGP+GET VVDRV L SD+N +LCIKF+IRHT
Sbjct: 836  ESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHT 895

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 896  RRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 955

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHAD VE+I                            YIF
Sbjct: 956  GKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIF 1015

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1016 MGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1075

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            I+ERLM+SSDPFEVQVCR CGLLGYYN KLK GICSTCKNG NIS+MKLPYACKLL QEL
Sbjct: 1076 IFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQEL 1135

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1136 QSMNIVPRLKLAEA 1149


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Citrus
            sinensis]
          Length = 1149

 Score = 1246 bits (3225), Expect = 0.0
 Identities = 612/734 (83%), Positives = 660/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +DSITVGLER+LSTGN+DVKRF+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSG
Sbjct: 416  RDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSG 475

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+EGPLISLC+ LGVEDLELLS
Sbjct: 476  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLS 535

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+IFNGLILGKHRRP+ FA+ MRKLRRAGKIGEFVS+FVNEKQRCVYIAS
Sbjct: 536  GEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIAS 595

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKG+SRIKEHHMKEL DGVR+FD FL+EGLIEYLDVNEENNALIALYE
Sbjct: 596  DGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYE 655

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
             +A   TTHIEIEPFTILGV+AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQLCRMD+
Sbjct: 656  GDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDS 715

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 716  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 775

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIV+KK +A++QKY N TSDRI+RPDR   G +  QILDDDGLAAPG+II+  DVYI K
Sbjct: 776  RCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINK 835

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +SP  TRG +       DS Y S++QTYKGP+GET VVDRV L SD+N +LCIKF+IRHT
Sbjct: 836  ESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHT 895

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 896  RRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 955

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHAD VE+I                            YIF
Sbjct: 956  GKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIF 1015

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1016 MGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1075

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            I+ERLM+SSDPFEVQVCR CGLLGYYN KLK GICSTCKNG+NIS+MKLPYACKLL QEL
Sbjct: 1076 IFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQEL 1135

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL EA
Sbjct: 1136 QSMNIVPRLKLAEA 1149


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score = 1241 bits (3211), Expect = 0.0
 Identities = 606/732 (82%), Positives = 660/732 (90%), Gaps = 23/732 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT GLER++STGNWD+KRFRMHRKGMTQV+ARLS+I TLGHMTKISPQFEKSRKVSG
Sbjct: 409  KDSITYGLERAISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSG 468

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++EGPLISLC SLGVEDLELLS
Sbjct: 469  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLS 528

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EE+H PNSYL+IFNGLILGKHR+P++FANA+RKLRR+GKIGEFVS++VNE+QRCVYIAS
Sbjct: 529  AEEIHTPNSYLVIFNGLILGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIAS 588

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKEL DGVR+F+ FL+EGLIEYLDVNEENNALIALYE
Sbjct: 589  DGGRVCRPLVIADKGVSRIKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYE 648

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A+  TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQLCRMDT
Sbjct: 649  GEAEPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDT 708

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 709  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 768

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAEQILDDDGLAAPGQIIRNMDVYIKKQS 1258
            RCIVMKK+SA++Q+Y N TSDRIIRP +  ++AE+ILD DG+AAPG+IIR  D+YI K++
Sbjct: 769  RCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNAEKILDADGIAAPGEIIRPHDIYINKET 828

Query: 1259 PKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHTRR 1438
            P  TR        L DSAY S++QTYKGP+GET VVDRV L SD++NNLCIKF+IRHTRR
Sbjct: 829  PVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRR 888

Query: 1439 PEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSK 1618
            PEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG K
Sbjct: 889  PEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGK 948

Query: 1619 AGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIFMG 1732
            AGVSCGRFHYGSAFGEPSGHADKVE I                            YIFMG
Sbjct: 949  AGVSCGRFHYGSAFGEPSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMG 1008

Query: 1733 PIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIY 1912
            PIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+
Sbjct: 1009 PIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIF 1068

Query: 1913 ERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQS 2092
            ERLM+SSDPFEVQVCR CGLLGYYN KLKTGICSTCK+G++IS MKLPYACKLLFQELQS
Sbjct: 1069 ERLMLSSDPFEVQVCRVCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQS 1128

Query: 2093 MNIIPRLKLTEA 2128
            MN++PRLKLTEA
Sbjct: 1129 MNVVPRLKLTEA 1140


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score = 1241 bits (3211), Expect = 0.0
 Identities = 606/732 (82%), Positives = 660/732 (90%), Gaps = 23/732 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT GLER++STGNWD+KRFRMHRKGMTQV+ARLS+I TLGHMTKISPQFEKSRKVSG
Sbjct: 411  KDSITYGLERAISTGNWDLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSG 470

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++EGPLISLC SLGVEDLELLS
Sbjct: 471  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLS 530

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
             EE+H PNSYL+IFNGLILGKHR+P++FANA+RKLRR+GKIGEFVS++VNE+QRCVYIAS
Sbjct: 531  AEEIHTPNSYLVIFNGLILGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIAS 590

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKEL DGVR+F+ FL+EGLIEYLDVNEENNALIALYE
Sbjct: 591  DGGRVCRPLVIADKGVSRIKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYE 650

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A+  TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQLCRMDT
Sbjct: 651  GEAEPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDT 710

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 711  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 770

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAEQILDDDGLAAPGQIIRNMDVYIKKQS 1258
            RCIVMKK+SA++Q+Y N TSDRIIRP +  ++AE+ILD DG+AAPG+IIR  D+YI K++
Sbjct: 771  RCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNAEKILDADGIAAPGEIIRPHDIYINKET 830

Query: 1259 PKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHTRR 1438
            P  TR        L DSAY S++QTYKGP+GET VVDRV L SD++NNLCIKF+IRHTRR
Sbjct: 831  PVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRR 890

Query: 1439 PEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSK 1618
            PEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG K
Sbjct: 891  PEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGK 950

Query: 1619 AGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIFMG 1732
            AGVSCGRFHYGSAFGEPSGHADKVE I                            YIFMG
Sbjct: 951  AGVSCGRFHYGSAFGEPSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMG 1010

Query: 1733 PIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIY 1912
            PIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+
Sbjct: 1011 PIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIF 1070

Query: 1913 ERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQS 2092
            ERLM+SSDPFEVQVCR CGLLGYYN KLKTGICSTCK+G++IS MKLPYACKLLFQELQS
Sbjct: 1071 ERLMLSSDPFEVQVCRVCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQS 1130

Query: 2093 MNIIPRLKLTEA 2128
            MN++PRLKLTEA
Sbjct: 1131 MNVVPRLKLTEA 1142


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 611/734 (83%), Positives = 657/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +++IT GLER+LSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSG
Sbjct: 420  RETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSG 479

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLC+ LGVEDLELLS
Sbjct: 480  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLS 539

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+I NGLILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQRCVYIAS
Sbjct: 540  GEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIAS 599

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKEL DGVRTFD FL++GLIEYLDVNEENNALIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 659

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT
Sbjct: 660  GEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 719

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 720  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMK+ SAV+QKYE G SDRI+RP R   G++  QILDDDG+A PG+IIR  D+YI K
Sbjct: 780  RCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINK 839

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +S   TRG       L DSAY  ++QTYKGPEGE+ VVDRV L +DRN+NL IKF+IRHT
Sbjct: 840  ESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHT 899

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 900  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 959

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHAD+VE I                            YIF
Sbjct: 960  GKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIF 1019

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1020 MGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1079

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            I+ERLMISSDPFEVQVCRKCGLLGYY+ KLKTGICS+CKNG+N+STMKLPYACKLL QEL
Sbjct: 1080 IFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQEL 1139

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL+EA
Sbjct: 1140 QSMNIVPRLKLSEA 1153


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 611/734 (83%), Positives = 657/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +++IT GLER+LSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSG
Sbjct: 425  RETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSG 484

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLC+ LGVEDLELLS
Sbjct: 485  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLS 544

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+I NGLILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQRCVYIAS
Sbjct: 545  GEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIAS 604

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKEL DGVRTFD FL++GLIEYLDVNEENNALIALYE
Sbjct: 605  DGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 664

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT
Sbjct: 665  GEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 724

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 725  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 784

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMK+ SAV+QKYE G SDRI+RP R   G++  QILDDDG+A PG+IIR  D+YI K
Sbjct: 785  RCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINK 844

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            +S   TRG       L DSAY  ++QTYKGPEGE+ VVDRV L +DRN+NL IKF+IRHT
Sbjct: 845  ESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHT 904

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 905  RRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 964

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
             KAGVSCGRFHYGSAFGEPSGHAD+VE I                            YIF
Sbjct: 965  GKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIF 1024

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASML
Sbjct: 1025 MGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASML 1084

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            I+ERLMISSDPFEVQVCRKCGLLGYY+ KLKTGICS+CKNG+N+STMKLPYACKLL QEL
Sbjct: 1085 IFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQEL 1144

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKL+EA
Sbjct: 1145 QSMNIVPRLKLSEA 1158


>ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Erythranthe
            guttata]
          Length = 1153

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 619/734 (84%), Positives = 654/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT GLER+LSTGN+D+KRF ++RKGM Q VARLSYI T+GHMTKI PQFEKSRKVSG
Sbjct: 420  KDSITFGLERTLSTGNFDLKRFGVNRKGMAQAVARLSYIATVGHMTKIIPQFEKSRKVSG 479

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLC++LGVE  E LS
Sbjct: 480  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYTLGVESFEYLS 539

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEE+HMPNSYLIIFNGLI+GKHRRPQ+F+NAMR LRRAGKIGEF+SIFVNEKQRCVYIAS
Sbjct: 540  GEEVHMPNSYLIIFNGLIIGKHRRPQRFSNAMRTLRRAGKIGEFISIFVNEKQRCVYIAS 599

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLK+GLIEYLDVNEENNALIALYE
Sbjct: 600  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKDGLIEYLDVNEENNALIALYE 659

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            +NAKE TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ CR DT
Sbjct: 660  DNAKEKTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQYCRTDT 719

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+ LLVYPQRPLLTTRTIELVS+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 720  LMCLLVYPQRPLLTTRTIELVSFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 779

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMK+M +V  KYEN TSDRII+P R G D E  QILDDDGLAAPGQ IR  D+YI K
Sbjct: 780  RCIVMKRMVSVCLKYENSTSDRIIKPQREGQDCEKMQILDDDGLAAPGQTIRADDIYINK 839

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            QSP +TR PV+    L DS+Y SS++ YKG  GE+ V+DRV L SDR+NN+ IKFM R T
Sbjct: 840  QSPIVTRVPVKSPMALPDSSYRSSREHYKGSVGESAVIDRVALFSDRDNNMKIKFMTRQT 899

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 900  RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 959

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHADKVETI                            YIF
Sbjct: 960  SKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIF 1019

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARG GP+VM+TRQPTEGRS NGGLRVGEMERDCLIAYG SML
Sbjct: 1020 MGPIYYQKLKHMVLDKMHARGHGPKVMMTRQPTEGRSNNGGLRVGEMERDCLIAYGTSML 1079

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            +YERLMISSD F VQVCRKCGLLGYYNFKLKTGICSTCKNG+NISTMKLPYACKLL QEL
Sbjct: 1080 LYERLMISSDEFVVQVCRKCGLLGYYNFKLKTGICSTCKNGDNISTMKLPYACKLLIQEL 1139

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKLTEA
Sbjct: 1140 QSMNIVPRLKLTEA 1153


>gb|EYU26925.1| hypothetical protein MIMGU_mgv1a000512mg [Erythranthe guttata]
          Length = 1103

 Score = 1239 bits (3206), Expect = 0.0
 Identities = 619/734 (84%), Positives = 654/734 (89%), Gaps = 25/734 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KDSIT GLER+LSTGN+D+KRF ++RKGM Q VARLSYI T+GHMTKI PQFEKSRKVSG
Sbjct: 370  KDSITFGLERTLSTGNFDLKRFGVNRKGMAQAVARLSYIATVGHMTKIIPQFEKSRKVSG 429

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLC++LGVE  E LS
Sbjct: 430  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYTLGVESFEYLS 489

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEE+HMPNSYLIIFNGLI+GKHRRPQ+F+NAMR LRRAGKIGEF+SIFVNEKQRCVYIAS
Sbjct: 490  GEEVHMPNSYLIIFNGLIIGKHRRPQRFSNAMRTLRRAGKIGEFISIFVNEKQRCVYIAS 549

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLK+GLIEYLDVNEENNALIALYE
Sbjct: 550  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKDGLIEYLDVNEENNALIALYE 609

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            +NAKE TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ CR DT
Sbjct: 610  DNAKEKTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQYCRTDT 669

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+ LLVYPQRPLLTTRTIELVS+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 670  LMCLLVYPQRPLLTTRTIELVSFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 729

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDR-GNDAE--QILDDDGLAAPGQIIRNMDVYIKK 1252
            RCIVMK+M +V  KYEN TSDRII+P R G D E  QILDDDGLAAPGQ IR  D+YI K
Sbjct: 730  RCIVMKRMVSVCLKYENSTSDRIIKPQREGQDCEKMQILDDDGLAAPGQTIRADDIYINK 789

Query: 1253 QSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHT 1432
            QSP +TR PV+    L DS+Y SS++ YKG  GE+ V+DRV L SDR+NN+ IKFM R T
Sbjct: 790  QSPIVTRVPVKSPMALPDSSYRSSREHYKGSVGESAVIDRVALFSDRDNNMKIKFMTRQT 849

Query: 1433 RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 1612
            RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG
Sbjct: 850  RRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG 909

Query: 1613 SKAGVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIF 1726
            SKAGVSCGRFHYGSAFGEPSGHADKVETI                            YIF
Sbjct: 910  SKAGVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIF 969

Query: 1727 MGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASML 1906
            MGPIYYQKLKHMVLDKMHARG GP+VM+TRQPTEGRS NGGLRVGEMERDCLIAYG SML
Sbjct: 970  MGPIYYQKLKHMVLDKMHARGHGPKVMMTRQPTEGRSNNGGLRVGEMERDCLIAYGTSML 1029

Query: 1907 IYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQEL 2086
            +YERLMISSD F VQVCRKCGLLGYYNFKLKTGICSTCKNG+NISTMKLPYACKLL QEL
Sbjct: 1030 LYERLMISSDEFVVQVCRKCGLLGYYNFKLKTGICSTCKNGDNISTMKLPYACKLLIQEL 1089

Query: 2087 QSMNIIPRLKLTEA 2128
            QSMNI+PRLKLTEA
Sbjct: 1090 QSMNIVPRLKLTEA 1103


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1231 bits (3185), Expect = 0.0
 Identities = 612/743 (82%), Positives = 656/743 (88%), Gaps = 34/743 (4%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            KD IT GLER+LSTGNWDVKRFRMHRKGMTQV+ARLS+IGTLGH+T+ISPQFEKSRKVSG
Sbjct: 412  KDIITQGLERALSTGNWDVKRFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSG 471

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++EGPLI+LC+ LGVEDLELLS
Sbjct: 472  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLS 531

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+LIIFNGLILGKHRRPQ+FAN MRKLRR G+IGEFVS+FVNEKQ CVYIAS
Sbjct: 532  GEELHTPNSFLIIFNGLILGKHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIAS 591

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKG+SRIKEHHMK L DG RTFD FL+EGL+EYLDVNEENNALIALYE
Sbjct: 592  DGGRVCRPLVIADKGISRIKEHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYE 651

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
            ++A   TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 652  QDATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDT 711

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIEL  YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
Sbjct: 712  LLYLLVYPQRPLLTTRTIELTGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 771

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGNDAE-----------QILDDDGLAAPGQIIR 1228
            RCIVMKK SAV+QKYENGTSDRI+RP R +D             QILD+DG+AAPG+IIR
Sbjct: 772  RCIVMKKYSAVNQKYENGTSDRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIR 831

Query: 1229 NMDVYIKKQSPKITRGPVQPR-ADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNL 1405
              DVYI K+SP IT+G   P+   L DS Y  S+QT+KG EGE+ VVDRV LSSD+N NL
Sbjct: 832  PNDVYINKESPIITKG--NPKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNL 889

Query: 1406 CIKFMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT 1585
             IKFMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSE GICPDLIMNPHGFPSRMT
Sbjct: 890  SIKFMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMT 949

Query: 1586 VGKMIELLGSKAGVSCGRFHYGSAFGEPSGHADKVETI---------------------- 1699
            VGKMIELLG KAGVSCGRFHYGSAFGEPSGHAD+VE I                      
Sbjct: 950  VGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGIT 1009

Query: 1700 XXXXXXYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDC 1879
                  YIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDC
Sbjct: 1010 GCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDC 1069

Query: 1880 LIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPY 2059
            LIAYGASMLIYERLM+SSDPFEVQVCR CGLLGYYN+KLKTGICS+CKNG+NISTMKLPY
Sbjct: 1070 LIAYGASMLIYERLMLSSDPFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPY 1129

Query: 2060 ACKLLFQELQSMNIIPRLKLTEA 2128
            ACKLL QELQSMNI+PRL+L ++
Sbjct: 1130 ACKLLIQELQSMNIVPRLRLADS 1152


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 612/757 (80%), Positives = 658/757 (86%), Gaps = 48/757 (6%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +++IT GLER+LSTGN+D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSG
Sbjct: 326  RETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSG 385

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLC+ LGVEDLELLS
Sbjct: 386  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLS 445

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+I NGLILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQRCVYIAS
Sbjct: 446  GEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIAS 505

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIADKGVSRIKEHHMKEL DGVRTFD FL++GLIEYLDVNEENNALIALYE
Sbjct: 506  DGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 565

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A   TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT
Sbjct: 566  GEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 625

Query: 902  LIYLLVYPQRPLLTTRTIELVS-----------------------YDKLGAGQNATVAVM 1012
            L+YLLVYPQRPLLTTRTIELVS                       YDKLGAGQNATVAVM
Sbjct: 626  LLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFCPVNCLLCFQVGYDKLGAGQNATVAVM 685

Query: 1013 SYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQ 1183
            SYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SAV+QKYE G SDRI+RP R   G++  Q
Sbjct: 686  SYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQ 745

Query: 1184 ILDDDGLAAPGQIIRNMDVYIKKQSPKITRGPVQPRADLADSAYTSSKQTYKGPEGETPV 1363
            ILDDDG+A PG+IIR  D+YI K+S   TRG       L DSAY  ++QTYKGPEGE+ V
Sbjct: 746  ILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCV 805

Query: 1364 VDRVVLSSDRNNNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICP 1543
            VDRV L +DRN+NL IKF+IRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICP
Sbjct: 806  VDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICP 865

Query: 1544 DLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEPSGHADKVETI-------- 1699
            DLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEPSGHAD+VE I        
Sbjct: 866  DLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHG 925

Query: 1700 --------------XXXXXXYIFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRS 1837
                                YIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+
Sbjct: 926  FSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRA 985

Query: 1838 RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICST 2017
            RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVCRKCGLLGYY+ KLKTGICS+
Sbjct: 986  RNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSS 1045

Query: 2018 CKNGENISTMKLPYACKLLFQELQSMNIIPRLKLTEA 2128
            CKNG+N+STMKLPYACKLL QELQSMNI+PRLKL+EA
Sbjct: 1046 CKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1082


>ref|XP_015578752.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Ricinus
            communis]
          Length = 1152

 Score = 1228 bits (3178), Expect = 0.0
 Identities = 602/731 (82%), Positives = 651/731 (89%), Gaps = 22/731 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +D+IT GLER+LSTGN+DVKRF+MHRKGMTQV+ RLSYI +LG MT++SPQFEKSRKVSG
Sbjct: 422  RDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSG 481

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++EGPLISLC+ LGVEDLELLS
Sbjct: 482  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLS 541

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+IFNGLILGKHRRPQ F N+MRKLRRAGKIGEFVS+FVNEKQR VY+AS
Sbjct: 542  GEELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLAS 601

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIAD+GVSRIKEHHMKEL+DGVRTFD FL++GLIEYLDVNEENNALIALYE
Sbjct: 602  DGGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALIALYE 661

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A   TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+
Sbjct: 662  GEATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDS 721

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 722  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 781

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGNDAEQILDDDGLAAPGQIIRNMDVYIKKQSP 1261
            RCIVMKK  A+ QKYENG SDRI+RPDR  + E++LD DGLAAPG+II+  D+Y+KK+ P
Sbjct: 782  RCIVMKKYPAIRQKYENGASDRILRPDRTVERERVLDYDGLAAPGEIIKPSDIYVKKECP 841

Query: 1262 KITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHTRRP 1441
              T GPV+  A L +  Y  S  +YKGPEGE+PV+DRV LSSDRNNNLCIK MIRHTRRP
Sbjct: 842  IDTMGPVKSSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRP 901

Query: 1442 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 1621
            EVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KA
Sbjct: 902  EVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 961

Query: 1622 GVSCGRFHYGSAFGEPSGHADKVETIXXXXXX----------------------YIFMGP 1735
            GVSCGRFHYGSAFGEPSGHAD VE I                            YIFMGP
Sbjct: 962  GVSCGRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGP 1021

Query: 1736 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1915
            IYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+E
Sbjct: 1022 IYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFE 1081

Query: 1916 RLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQSM 2095
            RLMISSDPFEVQVCR CGLLGY+N KL+ GICSTCKNG+NISTMKLPYACKLL QELQSM
Sbjct: 1082 RLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSM 1141

Query: 2096 NIIPRLKLTEA 2128
            NI+PRLKL EA
Sbjct: 1142 NIVPRLKLAEA 1152


>gb|EEF36800.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1228 bits (3177), Expect = 0.0
 Identities = 601/731 (82%), Positives = 651/731 (89%), Gaps = 22/731 (3%)
 Frame = +2

Query: 2    KDSITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSG 181
            +D+IT GLER+LSTGN+DVKRF+MHRKGMTQV+ RLSYI +LG MT++SPQFEKSRKVSG
Sbjct: 409  RDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSG 468

Query: 182  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLS 361
            PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++EGPLISLC+ LGVEDLELLS
Sbjct: 469  PRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLS 528

Query: 362  GEELHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIAS 541
            GEELH PNS+L+IFNGLILGKHRRPQ F N+MRKLRRAGKIGEFVS+FVNEKQR VY+AS
Sbjct: 529  GEELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLAS 588

Query: 542  DGGRVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYE 721
            DGGRVCRPLVIAD+GVSRIKEHHMKEL+DGVRTFD FL++GLIEYLDVNEENNAL+ALYE
Sbjct: 589  DGGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYE 648

Query: 722  ENAKEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDT 901
              A   TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+
Sbjct: 649  GEATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDS 708

Query: 902  LIYLLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1081
            L+YLLVYPQRPLLTTRTIELV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFG
Sbjct: 709  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFG 768

Query: 1082 RCIVMKKMSAVSQKYENGTSDRIIRPDRGNDAEQILDDDGLAAPGQIIRNMDVYIKKQSP 1261
            RCIVMKK  A+ QKYENG SDRI+RPDR  + E++LD DGLAAPG+II+  D+Y+KK+ P
Sbjct: 769  RCIVMKKYPAIRQKYENGASDRILRPDRTVERERVLDYDGLAAPGEIIKPSDIYVKKECP 828

Query: 1262 KITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHTRRP 1441
              T GPV+  A L +  Y  S  +YKGPEGE+PV+DRV LSSDRNNNLCIK MIRHTRRP
Sbjct: 829  IDTMGPVKSSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRP 888

Query: 1442 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 1621
            EVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KA
Sbjct: 889  EVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 948

Query: 1622 GVSCGRFHYGSAFGEPSGHADKVETIXXXXXX----------------------YIFMGP 1735
            GVSCGRFHYGSAFGEPSGHAD VE I                            YIFMGP
Sbjct: 949  GVSCGRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGP 1008

Query: 1736 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1915
            IYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+E
Sbjct: 1009 IYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFE 1068

Query: 1916 RLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQSM 2095
            RLMISSDPFEVQVCR CGLLGY+N KL+ GICSTCKNG+NISTMKLPYACKLL QELQSM
Sbjct: 1069 RLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSM 1128

Query: 2096 NIIPRLKLTEA 2128
            NI+PRLKL EA
Sbjct: 1129 NIVPRLKLAEA 1139


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score = 1220 bits (3156), Expect = 0.0
 Identities = 599/731 (81%), Positives = 649/731 (88%), Gaps = 25/731 (3%)
 Frame = +2

Query: 11   ITVGLERSLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRA 190
            IT GLER+LSTGN+D++RFRMHRKGMTQV+ARLS+IGTLG MTK+SPQFEKSRKVSGPRA
Sbjct: 427  ITTGLERTLSTGNFDIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRA 486

Query: 191  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCFSLGVEDLELLSGEE 370
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPL+SLC+ LGVEDLELLSGEE
Sbjct: 487  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEE 546

Query: 371  LHMPNSYLIIFNGLILGKHRRPQKFANAMRKLRRAGKIGEFVSIFVNEKQRCVYIASDGG 550
            LH PNS+L++ NGLILGKHRRPQ FANA+RKLRRAGK+GEFVS+FVNEKQRCVYIASDGG
Sbjct: 547  LHTPNSFLVMLNGLILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVYIASDGG 606

Query: 551  RVCRPLVIADKGVSRIKEHHMKELKDGVRTFDSFLKEGLIEYLDVNEENNALIALYEENA 730
            RVCRPLVIADKG+SRIKEHHMKEL DGVRTFD FL +GLIEYLDVNEENNALIALYE  A
Sbjct: 607  RVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIALYEGEA 666

Query: 731  KEGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIY 910
               TTHIEIEPFTILGV+AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTL+Y
Sbjct: 667  TPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLY 726

Query: 911  LLVYPQRPLLTTRTIELVSYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1090
            LLVYPQRPLLTTRTIELV YDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 727  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDRGFGRCI 786

Query: 1091 VMKKMSAVSQKYENGTSDRIIRPDR---GNDAEQILDDDGLAAPGQIIRNMDVYIKKQSP 1261
            VMKK S V QKYENG +DRI+RP R   G++   ILDDDG+A+PG+IIR  D+ + K+ P
Sbjct: 787  VMKKSSNVIQKYENGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDILLNKEVP 846

Query: 1262 KITRGPVQPRADLADSAYTSSKQTYKGPEGETPVVDRVVLSSDRNNNLCIKFMIRHTRRP 1441
              TRG       L DSAY   +Q+YKGPEGE+ V+DRV LS+DRN NL IKF+IRHTRRP
Sbjct: 847  IHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLIRHTRRP 906

Query: 1442 EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 1621
            E+GDKFSSRHGQKGVCG I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KA
Sbjct: 907  ELGDKFSSRHGQKGVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 966

Query: 1622 GVSCGRFHYGSAFGEPSGHADKVETI----------------------XXXXXXYIFMGP 1735
            GVSCGRFHYGSAFGEPSGHADKVETI                            YIFMGP
Sbjct: 967  GVSCGRFHYGSAFGEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQAYIFMGP 1026

Query: 1736 IYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYE 1915
            IYYQKLKHMVLDKMHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYGASMLI+E
Sbjct: 1027 IYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGASMLIFE 1086

Query: 1916 RLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQSM 2095
            RLM+SSDPFEVQVCRKCGLLGYY+ KLKTGICS+CKNG+++STM+LPYACKLL QELQSM
Sbjct: 1087 RLMVSSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLIQELQSM 1146

Query: 2096 NIIPRLKLTEA 2128
            NI+PRLKL EA
Sbjct: 1147 NIVPRLKLAEA 1157