BLASTX nr result

ID: Rehmannia28_contig00004959 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004959
         (354 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090737.1| PREDICTED: protein TIME FOR COFFEE [Sesamum ...    84   1e-16
gb|KHG03071.1| Protein TIME FOR COFFEE -like protein [Gossypium ...    55   2e-06

>ref|XP_011090737.1| PREDICTED: protein TIME FOR COFFEE [Sesamum indicum]
          Length = 1635

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 56/125 (44%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
 Frame = +1

Query: 1    PAQAMPLFNGSFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            PAQ MPLFNGSFY                                               
Sbjct: 924  PAQPMPLFNGSFYSSPMIHPSQLQQSQPPSNQPQQLLQAHQHGSASSGSSSSQKHLQSQQ 983

Query: 181  -RPQSSG---GSGNASLQNFASQKAQPSQQ---SHNQYMNHPSRPRHPEGEAGGEDSPST 339
             RPQSSG   GSG+A+LQNF +QK QP QQ   SHNQY+   +RPRH EGE GGEDSPST
Sbjct: 984  QRPQSSGVTSGSGSANLQNFPTQKTQPPQQLQQSHNQYVQS-ARPRHLEGEPGGEDSPST 1042

Query: 340  TDNRG 354
            TD+RG
Sbjct: 1043 TDSRG 1047


>gb|KHG03071.1| Protein TIME FOR COFFEE -like protein [Gossypium arboreum]
          Length = 1615

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
 Frame = +1

Query: 181  RPQSSGGSGNASLQNFASQKAQ-----PSQQSHNQYMNHPS-RPRHPEGEAGGEDSPSTT 342
            RP  SGGSG+ +LQ F + K Q     P QQ   Q   H S + RH EGE  G+DSPST+
Sbjct: 975  RPHGSGGSGSGTLQGFPAPKNQSSHPLPLQQRQQQPSQHASYQARHLEGELSGKDSPSTS 1034

Query: 343  DNR 351
            D+R
Sbjct: 1035 DSR 1037


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