BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004849
         (3475 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV a...  1726   0.0  
ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV a...  1692   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1556   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...  1509   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...  1506   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...  1504   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1485   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...  1484   0.0  
ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV a...  1483   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...  1475   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1455   0.0  
ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV a...  1444   0.0  
ref|XP_015084042.1| PREDICTED: DNA-directed RNA polymerases IV a...  1444   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV a...  1442   0.0  
emb|CDP09677.1| unnamed protein product [Coffea canephora]           1437   0.0  
emb|CDP07172.1| unnamed protein product [Coffea canephora]           1437   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...  1426   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1407   0.0  
gb|KVI06885.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca...  1378   0.0  
gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]  1370   0.0  

>ref|XP_011082677.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Sesamum indicum]
          Length = 1207

 Score = 1726 bits (4470), Expect = 0.0
 Identities = 842/1042 (80%), Positives = 936/1042 (89%), Gaps = 1/1042 (0%)
 Frame = -3

Query: 3464 MGAWDFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 3288
            MGA DFLEEAGPSS  EKF+NGS +M+I            DEL S++Q LDEG+LK FC+
Sbjct: 1    MGARDFLEEAGPSSFNEKFSNGSFRMDIDDDMDFDCSDSDDELDSSLQDLDEGFLKSFCK 60

Query: 3287 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 3108
            KA+T+FF++YGLISHQINSYNDFV++GIQ+VFDS+GEI +EP +DPSKKGDGDWR ASLK
Sbjct: 61   KASTAFFDQYGLISHQINSYNDFVRNGIQKVFDSIGEILIEPGYDPSKKGDGDWRRASLK 120

Query: 3107 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 2928
            FGKVTLE P F+ GEKFSSVDG +E+L L PR+ARLQNMTYSSRIKVETHL+V+T+ LSR
Sbjct: 121  FGKVTLEKPKFWTGEKFSSVDGAKEYLNLLPRHARLQNMTYSSRIKVETHLEVFTESLSR 180

Query: 2927 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKG 2748
            SDKFKTGVE F++KT+L++YH+DV FGRLPVMVKSDLCWM+  E+RDCEF+QGGYFVIKG
Sbjct: 181  SDKFKTGVEKFIEKTLLHEYHTDVNFGRLPVMVKSDLCWMSELEERDCEFEQGGYFVIKG 240

Query: 2747 AEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFY 2568
            AEKTFIAQEQ+CL RLWV K+P WT++YRPVSKRKR+++KLVPKVE++ G +KILTVYFY
Sbjct: 241  AEKTFIAQEQICLKRLWVAKSPAWTISYRPVSKRKRIFVKLVPKVEHITGGEKILTVYFY 300

Query: 2567 VTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVK 2388
            VTEIPIW+LFFALGV NDREVV +IDLD+EDSAI+NILIASIYDAD+KYEGFRK GNA K
Sbjct: 301  VTEIPIWLLFFALGVPNDREVVKMIDLDVEDSAISNILIASIYDADRKYEGFRKGGNAQK 360

Query: 2387 HIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRD 2208
             I++LM+  + PP ESVEECI NYLFP+L SP QKAC LAYMVKCLLEAYRGRRKVDNRD
Sbjct: 361  FIKELMQGCRFPPTESVEECITNYLFPHLKSPEQKACFLAYMVKCLLEAYRGRRKVDNRD 420

Query: 2207 DXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLS 2028
            D                LK+HIKHAER MVK+IQRDL  DRE+Q I+HYLDASIITNGLS
Sbjct: 421  DLRNKRLELAGELLERELKVHIKHAERRMVKAIQRDLYNDREVQSIDHYLDASIITNGLS 480

Query: 2027 RAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 1848
            RAFSTGAWSHPYK+MER+SG+VATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH
Sbjct: 481  RAFSTGAWSHPYKRMERISGIVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 540

Query: 1847 WGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSLLDGK 1668
            WGKICFLSTPDGENCGLVKNLASMGLVST IL +ESLLQ+F ECGME L DD S+LL+GK
Sbjct: 541  WGKICFLSTPDGENCGLVKNLASMGLVSTDILNRESLLQKFYECGMEMLVDDASALLNGK 600

Query: 1667 YKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDAGRILRPL 1488
            +KIFLDGDWVGICKDSSSFV+++RRKRR+ EVP+Q+EIK+DKHHGEVRIF DAGRILRPL
Sbjct: 601  HKIFLDGDWVGICKDSSSFVARVRRKRRKTEVPHQIEIKRDKHHGEVRIFADAGRILRPL 660

Query: 1487 LVVQNLKKIKDLKGDFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAELDNPPVRYT 1308
            L+VQNL+KIKDLKGDFSFQSLLDS +IE IGPEEEEDCQTAWG+++LFTAEL+NPP++YT
Sbjct: 661  LIVQNLRKIKDLKGDFSFQSLLDSSIIELIGPEEEEDCQTAWGVRYLFTAELENPPIKYT 720

Query: 1307 HCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRIDTNSHQLYY 1128
            HCELDSSFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+STTN SIR+DTNSHQLYY
Sbjct: 721  HCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNSSIRVDTNSHQLYY 780

Query: 1127 PQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRAS 948
            PQRPLFRT+L+DCLG+SK  DH K MLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRAS
Sbjct: 781  PQRPLFRTMLSDCLGRSKY-DHHKGMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRAS 839

Query: 947  LERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLEDDGFPYVGAN 768
            LERGMFR+EHVRSYKAEVEN EA GKK K DDLVSFGK QSKIGRVDSL+DDGFPY+GAN
Sbjct: 840  LERGMFRSEHVRSYKAEVENSEAAGKKAKTDDLVSFGKMQSKIGRVDSLDDDGFPYIGAN 899

Query: 767  LQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDK 588
            LQTGDIVIGKHAASGVDHSIKLKHTE+GMVQKVVLS+NDEGKNFAVVSLRQVRSPCLGDK
Sbjct: 900  LQTGDIVIGKHAASGVDHSIKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDK 959

Query: 587  FSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXX 408
            FSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQ              
Sbjct: 960  FSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGG 1019

Query: 407  XLKYATPFSTPSVEDITAQLHR 342
             LKYATPF++PSVEDITAQLHR
Sbjct: 1020 GLKYATPFTSPSVEDITAQLHR 1041


>ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
            [Erythranthe guttata] gi|604317141|gb|EYU29217.1|
            hypothetical protein MIMGU_mgv1a000367mg [Erythranthe
            guttata]
          Length = 1211

 Score = 1692 bits (4382), Expect = 0.0
 Identities = 819/1043 (78%), Positives = 933/1043 (89%), Gaps = 2/1043 (0%)
 Frame = -3

Query: 3464 MGAWDFLEEAGPSSK-EKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 3288
            MGAWDFLEEAGPSSK +KF+NG+TQM+I            DEL +AMQ L EG+LK+ CR
Sbjct: 1    MGAWDFLEEAGPSSKNDKFSNGTTQMDIDEDIEFDSSESEDELDTAMQELSEGFLKVSCR 60

Query: 3287 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 3108
            KA+T+FF++YGLISHQINSYNDFV HGIQ+VFDS+GEI VEP +DPSKKG+GDW+ A LK
Sbjct: 61   KASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLK 120

Query: 3107 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 2928
            FGKVTLE PTF+ GEKFSSVDG +++L+L PR+ARLQNMTY+++IKVETHLQVYTKGL+R
Sbjct: 121  FGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNR 180

Query: 2927 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKG 2748
            SDKF TGVEN V+KT+LN+YH++V FGRLPVMVKSDLCWM S +K+DCEFDQGGYFVIKG
Sbjct: 181  SDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGGYFVIKG 240

Query: 2747 AEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFY 2568
            AEKTFIAQEQ+CL RLWVTK P+WTV+YRPV++R RVYIKLVPK+E+V+GADKILTVYFY
Sbjct: 241  AEKTFIAQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLVPKMEHVIGADKILTVYFY 300

Query: 2567 VTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVK 2388
            VTEI +WVLFFALG+ ND+EVV LIDLDIEDS IANILIASIYDADKKYEGFRKEGN+ K
Sbjct: 301  VTEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKKYEGFRKEGNSSK 360

Query: 2387 HIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRD 2208
            HI++LM++ K PP ES+E+ IKNYLFP+L +P QKAC L YMVKCLLEAY+GRRKV+NRD
Sbjct: 361  HIKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRD 420

Query: 2207 DXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLS 2028
            D                L++HIKHAER M K++QRDL RDRE+Q I+ YLDASI+TNGLS
Sbjct: 421  DFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLS 480

Query: 2027 RAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 1848
            RAFSTGAW HP+K+MER SGVVATIRRTNPLQA ADMRKTRQQVSYTGRVGDARYPHPSH
Sbjct: 481  RAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSH 540

Query: 1847 WGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSLLDGK 1668
            WGK+CFLSTPDGENCGLVKNLAS+GLVST +L Q +LL++F++CGMEK+ DD S+LL GK
Sbjct: 541  WGKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGMEKMVDDTSNLLGGK 600

Query: 1667 YKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDAGRILRPL 1488
            +K+FLDGDW+GICKDSSSFVSKLRRKRRRME+P+Q+EIK+D+H+GEVRIF D+GRILRPL
Sbjct: 601  HKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEVRIFNDSGRILRPL 660

Query: 1487 LVVQNLKKIKDLKGDFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAELDNPPVRYT 1308
            LVVQNLKKIKDLKG+FSFQSLLD+G+IE IG EEEEDCQTAWG+++LFTAEL+NPPV+YT
Sbjct: 661  LVVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAWGVRYLFTAELENPPVKYT 720

Query: 1307 HCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRIDTNSHQLYY 1128
            HCELDSSFLLGLSCG++PF NHDHARRVLYQSEKHSQQAIGYSTTN  IR+DTNSH LYY
Sbjct: 721  HCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNSIIRVDTNSHSLYY 780

Query: 1127 PQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRAS 948
            PQRPLFRT+L+D LG+S  SDH K M+PRPEF+NGQCAIVA+NVHLGYNQEDSLVMNR+S
Sbjct: 781  PQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLGYNQEDSLVMNRSS 840

Query: 947  LERGMFRTEHVRSYKAEVENPEA-PGKKQKIDDLVSFGKTQSKIGRVDSLEDDGFPYVGA 771
            LERGMFRTEHVRS+KA+VEN EA  GKK K+D++VSFGK QSKIGRVDSLEDDGFPY+GA
Sbjct: 841  LERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRVDSLEDDGFPYIGA 900

Query: 770  NLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGD 591
            NLQTGDIVIGKHAA+GVDHSIKLKHTE+GMV KVVLS+NDEGKNFAVVSLRQVRSPCLGD
Sbjct: 901  NLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAVVSLRQVRSPCLGD 960

Query: 590  KFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXX 411
            KFSSMHGQKGVLGFLESQENFPF++QGIVPDIVINPHAFPSRQTPGQ             
Sbjct: 961  KFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALG 1020

Query: 410  XXLKYATPFSTPSVEDITAQLHR 342
              LKYATPFS+PSVEDITAQLHR
Sbjct: 1021 GGLKYATPFSSPSVEDITAQLHR 1043


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1556 bits (4030), Expect = 0.0
 Identities = 760/1038 (73%), Positives = 889/1038 (85%), Gaps = 4/1038 (0%)
 Frame = -3

Query: 3443 EEAGPS-SKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCRKAATSFF 3267
            ++ GPS SK+K  NG+T M+I            D++ +AMQ LDEG +K FCRKAATSFF
Sbjct: 2    DDVGPSTSKDKLFNGNTFMDIDEDIDFDLSDSDDDIDNAMQDLDEGVVKSFCRKAATSFF 61

Query: 3266 EKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD-GDWRYASLKFGKVTL 3090
            E++GLISHQ+NSYN+F+ HGI Q+F S+GEI VEP +DPSK+GD G+W+ ASLKFGKV L
Sbjct: 62   EQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSKRGDDGEWQKASLKFGKVNL 121

Query: 3089 EHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV-YTKGLSRSDKFK 2913
            E P+F+ GEKFSS +G +++L+L P++ARLQNMTY++RIKVETHL+V YT+GL RS+KF 
Sbjct: 122  ERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKVETHLEVVYTEGLVRSEKFT 181

Query: 2912 TGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKGAEKTF 2733
            TGV   V +T L     ++ FG+LPVMV SDLCW+ S+ K+DCEFDQGGYF+IKGAEKTF
Sbjct: 182  TGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKKDCEFDQGGYFIIKGAEKTF 241

Query: 2732 IAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFYVTEIP 2553
            IAQEQ+CL RLWV+K PTWT++YRP++KR+R+Y+KLVPKVE+    +KILTVYF   E+P
Sbjct: 242  IAQEQICLKRLWVSKDPTWTISYRPITKRRRIYLKLVPKVESAPVGEKILTVYFSFVEMP 301

Query: 2552 IWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVKHIEDL 2373
            IW+LFFALG  ND+EVV +ID+DIEDSAIANIL+ASI+DAD KYEGFRK G+A+KH++DL
Sbjct: 302  IWILFFALGARNDKEVVKMIDMDIEDSAIANILLASIHDADSKYEGFRKNGSAIKHLKDL 361

Query: 2372 MKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRDDXXXX 2193
            M+  K PP ESVEE  + +LFP+L S  QKAC LAYMVKCLLE Y+GRRKVDNRDD    
Sbjct: 362  MQEGKYPPTESVEEYFQIHLFPHLKSSVQKACFLAYMVKCLLECYKGRRKVDNRDDLRNK 421

Query: 2192 XXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLSRAFST 2013
                        L+I IKHAER M++S+QRDLD+ R+LQ I+HYLDASIITNGLSRAFST
Sbjct: 422  RLELAGELLERELRIQIKHAERRMMRSMQRDLDKGRDLQTIDHYLDASIITNGLSRAFST 481

Query: 2012 GAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSHWGKIC 1833
            GAWSHPYK+MER+SG+VAT+RRTNPLQA ADMRKTRQQVSYTGRVGDARYPHPSHWGKIC
Sbjct: 482  GAWSHPYKRMERISGIVATLRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGKIC 541

Query: 1832 FLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSLLDGKYKIFL 1653
            FLSTPDGENCGLVKNLAS+GLVST +L QE LL++FRECGME+L DD SSLLDGK+KIFL
Sbjct: 542  FLSTPDGENCGLVKNLASLGLVSTEVLDQEGLLKKFRECGMEQLADDTSSLLDGKHKIFL 601

Query: 1652 DGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDAGRILRPLLVVQN 1473
            DGD VG+C+DSSSFVS LRR+R++ EVP+QVEIK D+ +GEVR+F DAGRILRPLLVV+N
Sbjct: 602  DGDLVGVCRDSSSFVSMLRRRRQKNEVPHQVEIKMDQSNGEVRVFADAGRILRPLLVVRN 661

Query: 1472 LKKIKDLKGDFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAELDNPPVRYTHCELD 1293
            L+KI DLK    FQSLLD G++E IGPEEEEDCQTAWG K+LF AEL+NPPV+Y+HCELD
Sbjct: 662  LRKINDLKSHVFFQSLLDVGIVELIGPEEEEDCQTAWGTKYLFMAELENPPVKYSHCELD 721

Query: 1292 SSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRIDTNSHQLYYPQRPL 1113
            SSFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+STT+P+IR+DTNSHQLYYPQ+PL
Sbjct: 722  SSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTSPNIRVDTNSHQLYYPQKPL 781

Query: 1112 FRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM 933
            FRT+L+DCLGK   S  +K ++P P FFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM
Sbjct: 782  FRTVLSDCLGKLTDSCRRKGIIPLPPFFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGM 841

Query: 932  FRTEHVRSYKAEVENPE-APGKKQKIDDLVSFGKTQSKIGRVDSLEDDGFPYVGANLQTG 756
            FR+EHVRSYK++V+N E AP KK K DDL+SFGK QSKIGRVDSL++DGFPYVGANLQTG
Sbjct: 842  FRSEHVRSYKSDVDNSEAAPVKKFKADDLISFGKVQSKIGRVDSLDEDGFPYVGANLQTG 901

Query: 755  DIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSM 576
            DIVIGK  A+GVDHSIKLKHTERGMVQKV+LS++DEG+N+AVVSLRQVRSPCLGDKFSSM
Sbjct: 902  DIVIGKCTATGVDHSIKLKHTERGMVQKVILSADDEGRNYAVVSLRQVRSPCLGDKFSSM 961

Query: 575  HGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXLKY 396
            HGQKGVLGFLESQENFPFT+QGIVPDIVINPHAFPSRQTPGQ               LKY
Sbjct: 962  HGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGGLKY 1021

Query: 395  ATPFSTPSVEDITAQLHR 342
            ATPFS+PSVEDITAQLHR
Sbjct: 1022 ATPFSSPSVEDITAQLHR 1039


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score = 1509 bits (3906), Expect = 0.0
 Identities = 760/1092 (69%), Positives = 880/1092 (80%), Gaps = 23/1092 (2%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-------------AMQGLD 3315
            D ++E G SS K K +NGS  M+              +                 ++ L 
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPIKELG 64

Query: 3314 EGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD 3135
            EG+LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GD
Sbjct: 65   EGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 124

Query: 3134 GDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHL 2955
            GDW++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+
Sbjct: 125  GDWKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHV 183

Query: 2954 QVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFD 2775
            QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD
Sbjct: 184  QVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFD 243

Query: 2774 QGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVM 2601
             GGYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ 
Sbjct: 244  HGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIK 303

Query: 2600 GADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKY 2421
            G +K LTVYF V E+PIW+LFFALGVS+DREVV+LID+DIED+ I NIL+ASI+DADKK 
Sbjct: 304  GVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKC 363

Query: 2420 EGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEA 2241
            E FRK   A+ +++ L+K  + PP+ESVEECIK YLFPNLS  +QKA  L YMVK LL A
Sbjct: 364  EDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHA 423

Query: 2240 YRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHY 2061
            + GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHY
Sbjct: 424  FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHY 483

Query: 2060 LDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGR 1881
            LDASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+
Sbjct: 484  LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGK 543

Query: 1880 VGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKL 1701
            VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVSTTIL+   LL+    CGM+KL
Sbjct: 544  VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP--LLETLYRCGMQKL 601

Query: 1700 DDDMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRI 1521
             DD +  L GK K+ L+GDWVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEVRI
Sbjct: 602  VDDSAISLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRI 661

Query: 1520 FIDAGRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLF 1344
            F DAGRILRPLLVV NLKKIK LKG D+ FQSLLD+G+IE IGPEEEEDC+TAWG+++L 
Sbjct: 662  FSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLL 721

Query: 1343 TAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPS 1164
             A+ +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+
Sbjct: 722  KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 781

Query: 1163 IRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGY 984
            IR+DTN+HQLYYPQRPLFRT+L+D LGK K +  QK MLPRPE++NGQCAIVAVNVHLGY
Sbjct: 782  IRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLGY 841

Query: 983  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDS 804
            NQEDSLVMNRASLERGMFR+EHVRSYKAEV+N EA GKK KI+D V+FGKTQSKIGRVDS
Sbjct: 842  NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDS 901

Query: 803  LEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVS 624
            L+DDGFP++GANLQ+GDI+IGKHA SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVS
Sbjct: 902  LDDDGFPFIGANLQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 961

Query: 623  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXX 444
            LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ  
Sbjct: 962  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL 1021

Query: 443  XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRRSREEQKWRTPHQRKLR*QKLLENHY 264
                          KYATPFST SV+ I  QLH   R   KW        R  ++++N  
Sbjct: 1022 EAALGKGIALGGGQKYATPFSTLSVDAIIEQLH--GRGFSKWGNERVYNGRTGEMVQNLI 1079

Query: 263  FL------RIIH 246
            F+      R+IH
Sbjct: 1080 FMGPTFYQRLIH 1091


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score = 1506 bits (3899), Expect = 0.0
 Identities = 765/1094 (69%), Positives = 883/1094 (80%), Gaps = 19/1094 (1%)
 Frame = -3

Query: 3470 IEMGAWDFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQG 3321
            I M   D ++E G SS K K +NGS  M        E+            D L  A ++ 
Sbjct: 9    IHMTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKE 68

Query: 3320 LDEGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKK 3141
            L EG+LK FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+
Sbjct: 69   LGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKR 128

Query: 3140 GDGDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVET 2961
            GDGDW++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VET
Sbjct: 129  GDGDWKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVET 187

Query: 2960 HLQVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCE 2781
            H+QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCE
Sbjct: 188  HVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCE 247

Query: 2780 FDQGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVEN 2607
            FD GGYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E+
Sbjct: 248  FDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEH 307

Query: 2606 VMGADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADK 2427
            + GA+K LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADK
Sbjct: 308  IKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADK 367

Query: 2426 KYEGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLL 2247
            K E FRK   A+ +++ L+K  + PP+ESVEECI+ YLFPNLS  +QKA  L YMVK LL
Sbjct: 368  KCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLL 427

Query: 2246 EAYRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIE 2067
             A+ GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIE
Sbjct: 428  HAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIE 487

Query: 2066 HYLDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYT 1887
            HYLDASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YT
Sbjct: 488  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYT 547

Query: 1886 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGME 1707
            G+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVSTTIL+   LL+    CGM+
Sbjct: 548  GKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP--LLETLYRCGMQ 605

Query: 1706 KLDDDMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEV 1527
            KL DD ++ L GK K+ L+GDWVGIC+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEV
Sbjct: 606  KLVDDSATSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEV 665

Query: 1526 RIFIDAGRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKH 1350
            R+F DAGRILRPLLVV NLKKIK LKG D  FQSLLD+G+IE IGPEEEEDC+TAWG+++
Sbjct: 666  RMFSDAGRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEY 725

Query: 1349 LFTAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTN 1170
            L TA+ +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST N
Sbjct: 726  LLTADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVN 785

Query: 1169 PSIRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHL 990
            P+IR+DTN+HQLYYPQRPLFRT+L+D LGK K +  QK MLPRPE++NGQCAIVAVNVHL
Sbjct: 786  PNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHL 845

Query: 989  GYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRV 810
            GYNQEDSLVMN ASLERGMFR+EHVRSYKAEV+N EA GKK KI+D V+FGKTQSKIGRV
Sbjct: 846  GYNQEDSLVMNCASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRV 905

Query: 809  DSLEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAV 630
            DSL+DDGFP++GANLQ+GDI+IGK+A SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAV
Sbjct: 906  DSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAV 965

Query: 629  VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQ 450
            VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ
Sbjct: 966  VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQ 1025

Query: 449  XXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRRSREEQKWRTPHQRKLR*QKLLEN 270
                            KYATPFST SV+ I  QLH   R   KW        R  ++ +N
Sbjct: 1026 LLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLH--GRGFSKWGNERVYNGRTGEMGQN 1083

Query: 269  HYFL------RIIH 246
              F+      R+IH
Sbjct: 1084 LIFMGPTFYQRLIH 1097


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score = 1504 bits (3895), Expect = 0.0
 Identities = 763/1088 (70%), Positives = 881/1088 (80%), Gaps = 19/1088 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 3303
            D ++E G SS K K +NGS  M        E+            D L  A ++ L EG+L
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFL 64

Query: 3302 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 3123
            K FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+GDGDW+
Sbjct: 65   KNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWK 124

Query: 3122 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 2943
            +AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 125  HASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 2942 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 2763
            K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD GGY
Sbjct: 184  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 243

Query: 2762 FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 2589
            F++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ GA+K
Sbjct: 244  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEK 303

Query: 2588 ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 2409
             LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADKK E FR
Sbjct: 304  ALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFR 363

Query: 2408 KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 2229
            K   A+ +++ L+K  + PP+ESVEECI+ YLFPNLS  +QKA  L YMVK LL A+ GR
Sbjct: 364  KGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGR 423

Query: 2228 RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 2049
            RKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHYLDAS
Sbjct: 424  RKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDAS 483

Query: 2048 IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 1869
            IITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+VGDA
Sbjct: 484  IITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDA 543

Query: 1868 RYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDM 1689
            RYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVSTTIL+   LL+    CGM+KL DD 
Sbjct: 544  RYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKP--LLETLYRCGMQKLVDDS 601

Query: 1688 SSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDA 1509
            ++ L GK K+ L+GDWVGIC+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEVR+F DA
Sbjct: 602  ATSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDA 661

Query: 1508 GRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAEL 1332
            GRILRPLLVV NLKKIK LKG D  FQSLLD+G+IE IGPEEEEDC+TAWG+++L TA+ 
Sbjct: 662  GRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADK 721

Query: 1331 DNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRID 1152
            +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+IR+D
Sbjct: 722  ENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRVD 781

Query: 1151 TNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQED 972
            TN+HQLYYPQRPLFRT+L+D LGK K +  QK MLPRPE++NGQCAIVAVNVHLGYNQED
Sbjct: 782  TNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQED 841

Query: 971  SLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLEDD 792
            SLVMN ASLERGMFR+EHVRSYKAEV+N EA GKK KI+D V+FGKTQSKIGRVDSL+DD
Sbjct: 842  SLVMNCASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSLDDD 901

Query: 791  GFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQV 612
            GFP++GANLQ+GDI+IGK+A SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVSLRQV
Sbjct: 902  GFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQV 961

Query: 611  RSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXX 432
            RSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ      
Sbjct: 962  RSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAAL 1021

Query: 431  XXXXXXXXXLKYATPFSTPSVEDITAQLHRRSREEQKWRTPHQRKLR*QKLLENHYFL-- 258
                      KYATPFST SV+ I  QLH   R   KW        R  ++ +N  F+  
Sbjct: 1022 GKGIALGGGQKYATPFSTLSVDAIIEQLH--GRGFSKWGNERVYNGRTGEMGQNLIFMGP 1079

Query: 257  ----RIIH 246
                R+IH
Sbjct: 1080 TFYQRLIH 1087


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1485 bits (3845), Expect = 0.0
 Identities = 743/1053 (70%), Positives = 859/1053 (81%), Gaps = 15/1053 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 3309
            D +EE G SS KEK +NGS +M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGET 64

Query: 3308 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 3129
            YLK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   YLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 3128 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 2949
            W++AS+KFGKVTLE P F+AGEKFS+ DG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFSA-DGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 2948 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 2769
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 2768 GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 2595
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 2594 DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 2415
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 2414 FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 2235
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 2234 GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 2055
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 2054 ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 1875
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 1874 DARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDD 1695
            DARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST IL+    L+    CGM+KL D
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVD 600

Query: 1694 DMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFI 1515
            D ++ L GK K+ LDG+WVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEVRIF 
Sbjct: 601  DCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS 660

Query: 1514 DAGRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTA 1338
            D+GRILRPLLVV NLKKIK LKG D+ FQSLLD+G+IEFIGPEEEEDC+TAWG++++  A
Sbjct: 661  DSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKA 720

Query: 1337 ELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIR 1158
            + +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+ R
Sbjct: 721  DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR 780

Query: 1157 IDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQ 978
            +DTN+HQLYYPQRPLFRT+LAD LGK K + +QK MLPRPE+FNGQCAIVAVNVHLGYNQ
Sbjct: 781  VDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ 840

Query: 977  EDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLE 798
            EDSLVMNRASLERGMFR+EHVRSYKAEV+N EA  KK KI+D V+FGKTQSKIGRVDSL+
Sbjct: 841  EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD 900

Query: 797  DDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 618
            DDGFP++GANLQ+GDI+IGK A SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVSLR
Sbjct: 901  DDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 960

Query: 617  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXX 438
            QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ    
Sbjct: 961  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1020

Query: 437  XXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                        KYATPFST SV+ I  QL  R
Sbjct: 1021 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGR 1053


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score = 1484 bits (3841), Expect = 0.0
 Identities = 743/1053 (70%), Positives = 858/1053 (81%), Gaps = 15/1053 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 3309
            D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 3308 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 3129
            +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 3128 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 2949
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 2948 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 2769
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 2768 GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 2595
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 2594 DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 2415
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 2414 FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 2235
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 2234 GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 2055
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 2054 ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 1875
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 1874 DARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDD 1695
            DARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST IL+    L+    CGM+KL D
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVD 600

Query: 1694 DMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFI 1515
            D S+ L GK K+ LDG+WVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEVRIF 
Sbjct: 601  DCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS 660

Query: 1514 DAGRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTA 1338
            D GRILRPLLVV NLKKIK LKG D+ FQSLLD+G+IE IGPEEEEDC+TAWG++++  A
Sbjct: 661  DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA 720

Query: 1337 ELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIR 1158
            + +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+ R
Sbjct: 721  DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR 780

Query: 1157 IDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQ 978
            +DTN+HQLYYPQRPLFRT+LAD LGK K + +QK MLPRPE+FNGQCAIVAVNVHLGYNQ
Sbjct: 781  VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ 840

Query: 977  EDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLE 798
            EDSLVMNRASLERGMFR+EHVRSYKAEV+N EA  KK KI+D V+FGKTQSKIGRVDSL+
Sbjct: 841  EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD 900

Query: 797  DDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 618
            DDGFP++GANLQ+GDI+IGK + SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVSLR
Sbjct: 901  DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 960

Query: 617  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXX 438
            QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ    
Sbjct: 961  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1020

Query: 437  XXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                        KYATPFST SV+ I  QL  R
Sbjct: 1021 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGR 1053


>ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum pennellii]
          Length = 1217

 Score = 1483 bits (3840), Expect = 0.0
 Identities = 742/1053 (70%), Positives = 858/1053 (81%), Gaps = 15/1053 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 3309
            D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 3308 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 3129
            +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 3128 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 2949
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 2948 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 2769
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 2768 GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 2595
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 2594 DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 2415
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 2414 FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 2235
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 2234 GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 2055
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 2054 ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 1875
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 1874 DARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDD 1695
            DARYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST IL+    L+    CGM+KL D
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVD 600

Query: 1694 DMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFI 1515
            D S+ L GK K+ LDG+WVG+C+DS+ F+SKLRRKRRR EVP+QVE+K+D+  GEVRIF 
Sbjct: 601  DCSTSLHGKQKVLLDGEWVGVCEDSALFLSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS 660

Query: 1514 DAGRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTA 1338
            D GRILRPLLVV NLKKIK LKG D+ FQSLLD+G+IE IGPEEEEDC+TAWG++++  A
Sbjct: 661  DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA 720

Query: 1337 ELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIR 1158
            + +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+ R
Sbjct: 721  DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR 780

Query: 1157 IDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQ 978
            +DTN+HQLYYPQRPLFRT+LAD LGK K + +QK MLPRPE+FNGQCAIVAVNVHLGYNQ
Sbjct: 781  VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ 840

Query: 977  EDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLE 798
            EDSLVMNRASLERGMFR+EHVRSYKAEV+N EA  KK KI+D V+FGKTQSKIGRVDSL+
Sbjct: 841  EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD 900

Query: 797  DDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 618
            DDGFP++GANLQ+GDI+IGK + SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVSLR
Sbjct: 901  DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 960

Query: 617  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXX 438
            QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ    
Sbjct: 961  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1020

Query: 437  XXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                        KYATPFST SV+ I  QL  R
Sbjct: 1021 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGR 1053


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 740/1051 (70%), Positives = 854/1051 (81%), Gaps = 15/1051 (1%)
 Frame = -3

Query: 3446 LEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEGYL 3303
            +EE G SS KEK +NGST+M+              +               ++ L E +L
Sbjct: 1    MEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGESFL 60

Query: 3302 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 3123
            K FC+KA+T FFEKYG ISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGDW+
Sbjct: 61   KNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWK 120

Query: 3122 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 2943
            +AS+KFGKVTLE P F+AGEKFS V G +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 121  HASVKFGKVTLERPKFWAGEKFS-VGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYT 179

Query: 2942 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 2763
            K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD GGY
Sbjct: 180  KKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGY 239

Query: 2762 FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 2589
            F+ KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G +K
Sbjct: 240  FIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEK 299

Query: 2588 ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 2409
             L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E FR
Sbjct: 300  ALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFR 358

Query: 2408 KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 2229
            K   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ GR
Sbjct: 359  KGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGR 418

Query: 2228 RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 2049
            RKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLDAS
Sbjct: 419  RKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDAS 478

Query: 2048 IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 1869
            IITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VGDA
Sbjct: 479  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDA 538

Query: 1868 RYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDM 1689
            RYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVST IL+    L+    CGM+KL DD 
Sbjct: 539  RYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVDDC 596

Query: 1688 SSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDA 1509
            S+ L GK K+ LDG+WVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+  GEVRIF D 
Sbjct: 597  STSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDP 656

Query: 1508 GRILRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAEL 1332
            GRILRPLLVV NLKKIK LKG D+ FQSLLD+G+IE IGPEEEEDC+TAWG++++  A+ 
Sbjct: 657  GRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADK 716

Query: 1331 DNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRID 1152
            +NPP +YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+ST NP+ R+D
Sbjct: 717  ENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRVD 776

Query: 1151 TNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQED 972
            TN+HQLYYPQRPLFRT+LAD LGK K + +QK MLPRPE+FNGQCAIVAVNVHLGYNQED
Sbjct: 777  TNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQED 836

Query: 971  SLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLEDD 792
            SLVMNRASLERGMFR+EHVRSYKAEV+N EA  KK KI+D V+FGKTQSKIGRVDSL+DD
Sbjct: 837  SLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLDDD 896

Query: 791  GFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQV 612
            GFP++GANLQ+GDI+IGK + SG DHS+KLKHTERGMVQKV+LS+NDEGKNFAVVSLRQV
Sbjct: 897  GFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQV 956

Query: 611  RSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXX 432
            RSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ      
Sbjct: 957  RSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL 1016

Query: 431  XXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                      KYATPFST SV+ I  QL  R
Sbjct: 1017 GKGIALGGGQKYATPFSTLSVDAIMEQLQGR 1047


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum] gi|971581274|ref|XP_015159439.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Solanum tuberosum]
          Length = 1219

 Score = 1455 bits (3766), Expect = 0.0
 Identities = 722/1055 (68%), Positives = 855/1055 (81%), Gaps = 17/1055 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELG---------SAMQGLDEGYL 3303
            D +E+ G SS K K +NGST M+              +           ++++ L  G+L
Sbjct: 5    DIMEDVGCSSGKAKTSNGSTMMDFDIDGLFEVEDYDWDEDEDEDDNLDMTSIKELGGGFL 64

Query: 3302 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 3123
            + FC+KA+  FFEKYG+ISHQI+SYNDF+++GIQ+VFDSVGEI VEP +DPSKKG+G+W+
Sbjct: 65   RNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGEWK 124

Query: 3122 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 2943
            +AS+KFGKVTL+ P F+AGEKFS+ +G +E+L L PR+ARLQNMTYS+RI VETH+QV+T
Sbjct: 125  HASVKFGKVTLDRPKFWAGEKFSAYNG-EEYLDLWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 2942 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 2763
            K L RSDKFKTGVE FVDK  + +   DV  GR+PVMV S+LCWM+ +++ DC+FD GGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHGGY 243

Query: 2762 FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 2589
            F++KGAEK FIAQEQ+CL RLWV+   TW VAYR   KR RVY+KL    K E++ G  K
Sbjct: 244  FIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAK 303

Query: 2588 ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 2409
             L+VYF + E+PIWVLFFALGVS+DRE+V+LID+DI+D+ I NIL+ASI+DADK  E FR
Sbjct: 304  ALSVYF-LAEMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCEDFR 362

Query: 2408 KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 2229
            K   A+ +++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCLL +Y GR
Sbjct: 363  KGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 422

Query: 2228 RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 2049
            RKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QP+EHYLDAS
Sbjct: 423  RKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLDAS 482

Query: 2048 IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 1869
            IITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TAD+RKTRQQV+YTG+VGDA
Sbjct: 483  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 542

Query: 1868 RYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDM 1689
            RYPHPSHWGK+CFLSTPDGENCGLVKNLASMGLVSTT+L+   LL+    CGM+KL DD 
Sbjct: 543  RYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKP--LLETLFRCGMQKLVDDS 600

Query: 1688 SSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDA 1509
            ++ L GK K+ LDGDWVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+   EVRIF DA
Sbjct: 601  ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDA 660

Query: 1508 GRILRPLLVVQNLKKIKDLK-----GDFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLF 1344
            GRI+RPLLVV NLK IK LK     GD+ FQ+LLD G+IE IGPEEEEDC+TAWG+++L 
Sbjct: 661  GRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLL 720

Query: 1343 TAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPS 1164
             A+ +NPPV YTHCELD SFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIG+ST NP+
Sbjct: 721  KADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 780

Query: 1163 IRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGY 984
             R+DTN+HQLYYPQRPLF T+L+D LGK K   HQK ML RPE++NGQCAIVAVNVHLGY
Sbjct: 781  ARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLGY 840

Query: 983  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDS 804
            NQEDS+VMNRASLERGMFR+EHVRSYKAEV+N EA GKK K++D V+FGKTQSKIGRVDS
Sbjct: 841  NQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRVDS 900

Query: 803  LEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVS 624
            L+DDGFP++GANLQ+GDI+IGK+A SG DHS+K+KHTERGMVQKV+LS+ND+GKNFAVVS
Sbjct: 901  LDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAVVS 960

Query: 623  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXX 444
            LRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ  
Sbjct: 961  LRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLL 1020

Query: 443  XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                          KYATPFS  SV+ I  QLH R
Sbjct: 1021 EAALGKGIALGGGEKYATPFSALSVDAILKQLHGR 1055


>ref|XP_010325603.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X1 [Solanum lycopersicum]
          Length = 1225

 Score = 1444 bits (3738), Expect = 0.0
 Identities = 724/1061 (68%), Positives = 852/1061 (80%), Gaps = 17/1061 (1%)
 Frame = -3

Query: 3470 IEMGAWDFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQG 3321
            ++M   D +E+ G SS K K +NGST M        E+            D L  A ++ 
Sbjct: 5    VQMTISDIMEDVGCSSGKGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKE 64

Query: 3320 LDEGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKK 3141
            L  G+L+ FC+KA+  FFEKYGLISHQI+SYNDF+++GIQ+VFDSVGEI VEP +DPSKK
Sbjct: 65   LGGGFLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKK 124

Query: 3140 GDGDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVET 2961
            G+G+W++AS+KFG V L+ P F+AGEK+S+ +G +E+L + PR+ARLQNMTYS+RI VET
Sbjct: 125  GEGEWKHASVKFGNVILDRPKFWAGEKYSAYNG-EEYLNMWPRHARLQNMTYSARIIVET 183

Query: 2960 HLQVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCE 2781
            H+QV+TK L RSDKFKTGVE FVDK  + +   DV  GR+PVMV S+LCWM+ +++ DCE
Sbjct: 184  HVQVFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCE 243

Query: 2780 FDQGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVEN 2607
            FD GGYF++KGAEK FIAQEQMCL RLWV+   TW VAYR   KR RVY+KL    K E 
Sbjct: 244  FDHGGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQ 303

Query: 2606 VMGADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADK 2427
            + G  K L+VYF + E+PIWVLFFALGVS+DREVV+LID+DI+D+ I NIL+ASI+DADK
Sbjct: 304  IKGEAKSLSVYF-LAEMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 362

Query: 2426 KYEGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLL 2247
              E FRK   A+ +++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCLL
Sbjct: 363  NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 422

Query: 2246 EAYRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIE 2067
             +Y GRRKVDNRDD                L++HIKHAER MVK++QRDL  DR++ PIE
Sbjct: 423  LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 482

Query: 2066 HYLDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYT 1887
            HYLDASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TAD+RKTRQQV+YT
Sbjct: 483  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 542

Query: 1886 GRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGME 1707
            G+VGDARYP+PSHWGK+CFLSTPDGENCGLVKNLASMGLVSTT+L    LL+    CGM+
Sbjct: 543  GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMP--LLETLFRCGMQ 600

Query: 1706 KLDDDMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEV 1527
            KL DD ++ L GK K+ LDGDWVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+   EV
Sbjct: 601  KLVDDCATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEV 660

Query: 1526 RIFIDAGRILRPLLVVQNLKKIKDLKG-----DFSFQSLLDSGVIEFIGPEEEEDCQTAW 1362
            RIF DAGRI+RPLLVV NLK IK L G     D+ FQ+LLD G+IE IGPEEEEDC+TAW
Sbjct: 661  RIFSDAGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAW 720

Query: 1361 GIKHLFTAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGY 1182
            G+++L  A+ +NPPV YTHCELD SFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIG+
Sbjct: 721  GVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGF 780

Query: 1181 STTNPSIRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAV 1002
            ST NP+IR+DTN+HQLYYPQRPLF T+L+D LGK K + HQ+ ML RPE++NGQCAIVAV
Sbjct: 781  STVNPNIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAV 840

Query: 1001 NVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSK 822
            NVHLGYNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N EA GKK K +D V+FGKTQSK
Sbjct: 841  NVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSK 900

Query: 821  IGRVDSLEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGK 642
            IGRVD L+DDG PY+GANLQ+GDI+IGK A SG DHS+K+KHTE+GMVQKV+LS+NDEGK
Sbjct: 901  IGRVDCLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGK 960

Query: 641  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQ 462
            NFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQ
Sbjct: 961  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQ 1020

Query: 461  TPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
            TPGQ                KYATPFS  SV+ I  QLH R
Sbjct: 1021 TPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGR 1061


>ref|XP_015084042.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum pennellii]
          Length = 1219

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 724/1055 (68%), Positives = 849/1055 (80%), Gaps = 17/1055 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 3303
            D +E+ G SS K K +NGST M        E+            D L  A ++ L  G+L
Sbjct: 5    DIMEDVGCSSGKGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKELGGGFL 64

Query: 3302 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 3123
            + FC+KA+  FFEKYGLISHQI+SYNDF+++GIQ+VFDSVGEI VEP +DPSKKG+G+W+
Sbjct: 65   RNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGEWK 124

Query: 3122 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 2943
            +AS+KFG V L+ P F+AGEK+S+ +G +E+L + PR+ARLQNMTYS+RI VETH+QV+T
Sbjct: 125  HASVKFGNVILDRPKFWAGEKYSAYNG-EEYLNMWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 2942 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 2763
            K L RSDKFKTGVE FVDK  + +   DV  GR+PVMV S+LCWM+  ++ DCEFD GGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGVDRLDCEFDHGGY 243

Query: 2762 FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 2589
            F++KGAEK FIAQEQMCL RLWV+   TW VAYR   KR RVY+KL    K E + G  K
Sbjct: 244  FIVKGAEKIFIAQEQMCLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEQIKGEAK 303

Query: 2588 ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 2409
             L+VYF + E+PIWVLFFALGVS+DREVV+LID+DI+D+ I NIL+ASI+DADK  E FR
Sbjct: 304  SLSVYF-LAEMPIWVLFFALGVSSDREVVDLIDVDIKDTKIINILVASIHDADKNCEDFR 362

Query: 2408 KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 2229
            K   A+ +++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCLL +Y GR
Sbjct: 363  KGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 422

Query: 2228 RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 2049
            RKVDNRDD                L++HIKHAER MVK++QRDL  DR++ PIEHYLDAS
Sbjct: 423  RKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDAS 482

Query: 2048 IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 1869
            IITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TAD+RKTRQQV+YTG+VGDA
Sbjct: 483  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 542

Query: 1868 RYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDM 1689
            RYP+PSHWGK+CFLSTPDGENCGLVKNLASMGLVSTT+L    LL+    CGM+KL DD 
Sbjct: 543  RYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMP--LLETLFRCGMQKLVDDS 600

Query: 1688 SSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDA 1509
            ++ L GK K+ LDGDWVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+   EVRIF DA
Sbjct: 601  ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDA 660

Query: 1508 GRILRPLLVVQNLKKIKDLKG-----DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLF 1344
            GRI+RPLLVV NLK IK L G     D+ FQ+LLD G+IE IGPEEEEDC+TAWG+++L 
Sbjct: 661  GRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLL 720

Query: 1343 TAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPS 1164
             A+ +NPPV YTHCELD SFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIG+ST NP+
Sbjct: 721  KADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 780

Query: 1163 IRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGY 984
            IR+DTN+HQLYYPQRPLF T+L+D LGK K + HQ+ ML RPE++NGQCAIVAVNVHLGY
Sbjct: 781  IRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGY 840

Query: 983  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDS 804
            NQEDS+VMNRASLERGMFR+EHVRSYKAEV+N EA GKK K +D V+FGKTQSKIGRVD 
Sbjct: 841  NQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEAIGKKSKAEDSVNFGKTQSKIGRVDC 900

Query: 803  LEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVS 624
            L+DDGFPY+GANLQ+GDI+IGK A SG DHS+K+KHTE+GMVQKV+LS+NDEGKNFAVVS
Sbjct: 901  LDDDGFPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVS 960

Query: 623  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXX 444
            LRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ  
Sbjct: 961  LRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLL 1020

Query: 443  XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                          KYATPFS  SV+ I  QLH R
Sbjct: 1021 EAALGKGIALGGGEKYATPFSALSVDAILKQLHGR 1055


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            isoform X2 [Solanum lycopersicum]
          Length = 1219

 Score = 1442 bits (3734), Expect = 0.0
 Identities = 723/1055 (68%), Positives = 849/1055 (80%), Gaps = 17/1055 (1%)
 Frame = -3

Query: 3452 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 3303
            D +E+ G SS K K +NGST M        E+            D L  A ++ L  G+L
Sbjct: 5    DIMEDVGCSSGKGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKELGGGFL 64

Query: 3302 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 3123
            + FC+KA+  FFEKYGLISHQI+SYNDF+++GIQ+VFDSVGEI VEP +DPSKKG+G+W+
Sbjct: 65   RNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGEWK 124

Query: 3122 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 2943
            +AS+KFG V L+ P F+AGEK+S+ +G +E+L + PR+ARLQNMTYS+RI VETH+QV+T
Sbjct: 125  HASVKFGNVILDRPKFWAGEKYSAYNG-EEYLNMWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 2942 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 2763
            K L RSDKFKTGVE FVDK  + +   DV  GR+PVMV S+LCWM+ +++ DCEFD GGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHGGY 243

Query: 2762 FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 2589
            F++KGAEK FIAQEQMCL RLWV+   TW VAYR   KR RVY+KL    K E + G  K
Sbjct: 244  FIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQIKGEAK 303

Query: 2588 ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 2409
             L+VYF + E+PIWVLFFALGVS+DREVV+LID+DI+D+ I NIL+ASI+DADK  E FR
Sbjct: 304  SLSVYF-LAEMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADKNCEDFR 362

Query: 2408 KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 2229
            K   A+ +++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCLL +Y GR
Sbjct: 363  KGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 422

Query: 2228 RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 2049
            RKVDNRDD                L++HIKHAER MVK++QRDL  DR++ PIEHYLDAS
Sbjct: 423  RKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDAS 482

Query: 2048 IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 1869
            IITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TAD+RKTRQQV+YTG+VGDA
Sbjct: 483  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 542

Query: 1868 RYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDM 1689
            RYP+PSHWGK+CFLSTPDGENCGLVKNLASMGLVSTT+L    LL+    CGM+KL DD 
Sbjct: 543  RYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMP--LLETLFRCGMQKLVDDC 600

Query: 1688 SSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDA 1509
            ++ L GK K+ LDGDWVG+C+DS+ FVSKLRRKRRR EVP+QVE+K+D+   EVRIF DA
Sbjct: 601  ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDA 660

Query: 1508 GRILRPLLVVQNLKKIKDLKG-----DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLF 1344
            GRI+RPLLVV NLK IK L G     D+ FQ+LLD G+IE IGPEEEEDC+TAWG+++L 
Sbjct: 661  GRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLL 720

Query: 1343 TAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPS 1164
             A+ +NPPV YTHCELD SFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIG+ST NP+
Sbjct: 721  KADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 780

Query: 1163 IRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGY 984
            IR+DTN+HQLYYPQRPLF T+L+D LGK K + HQ+ ML RPE++NGQCAIVAVNVHLGY
Sbjct: 781  IRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGY 840

Query: 983  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDS 804
            NQEDS+VMNRASLERGMFR+EHVRSYKAEV+N EA GKK K +D V+FGKTQSKIGRVD 
Sbjct: 841  NQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVDC 900

Query: 803  LEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVS 624
            L+DDG PY+GANLQ+GDI+IGK A SG DHS+K+KHTE+GMVQKV+LS+NDEGKNFAVVS
Sbjct: 901  LDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVS 960

Query: 623  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXX 444
            LRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPSRQTPGQ  
Sbjct: 961  LRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLL 1020

Query: 443  XXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHRR 339
                          KYATPFS  SV+ I  QLH R
Sbjct: 1021 EAALGKGIALGGGEKYATPFSALSVDAILKQLHGR 1055


>emb|CDP09677.1| unnamed protein product [Coffea canephora]
          Length = 1213

 Score = 1437 bits (3721), Expect = 0.0
 Identities = 711/1040 (68%), Positives = 842/1040 (80%), Gaps = 11/1040 (1%)
 Frame = -3

Query: 3428 SSKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCRKAATSFFEKYGLI 3249
            SSK+K ++ +  M+I            + +   +Q L E +LK FC+KAAT+FFE+YGLI
Sbjct: 14   SSKDKLSDETLLMDIDDIDFDDFDDMLNSV--TLQELGEDFLKKFCKKAATAFFEQYGLI 71

Query: 3248 SHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLKFGKVTLEHPTFFA 3069
            SHQINSYN+FVK+GIQ++FDSVGEI VEP FDPSK+GDG+W+YAS+KFGKV L+ P F+ 
Sbjct: 72   SHQINSYNNFVKYGIQEMFDSVGEIVVEPGFDPSKRGDGEWKYASIKFGKVILDKPDFWT 131

Query: 3068 GEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSRSDKFKTGVENFVD 2889
            G+KF   DG +E+LK  PR+ARLQ+MTYS+RIKVETH+QVYTK L  SDK KTG    ++
Sbjct: 132  GDKFFG-DGGKEYLKFLPRHARLQSMTYSARIKVETHVQVYTKKLLASDKAKTGRAVHIE 190

Query: 2888 KTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKGAEKTFIAQEQMCL 2709
                 +   +VI GRLPVMV+SDLCWMN  EK DCEFD GGYF+IKGAEKTF+AQEQ+CL
Sbjct: 191  NECEKEEKREVIIGRLPVMVRSDLCWMNGVEKDDCEFDHGGYFIIKGAEKTFVAQEQICL 250

Query: 2708 SRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADKILTVYFYVTEIPIWVLFF 2535
            +RLW++  P WTV+YRPV++RKRVY+KLV   K  N++G  ++L+VYF + E+P+W+LFF
Sbjct: 251  TRLWLSSVPCWTVSYRPVARRKRVYLKLVDESKFANLIGGQRVLSVYFVIAEMPVWILFF 310

Query: 2534 ALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYE--------GFRKEGNAVKHIE 2379
            ALG S+DREVV+LIDL+IED+ IANIL  SIY AD K+E        GFRK  NA+ +++
Sbjct: 311  ALGASSDREVVDLIDLNIEDTKIANILTGSIYYADTKFEDADLKCKGGFRKGRNALDYVQ 370

Query: 2378 DLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRDDXX 2199
             L+ + K PP ESVEECI N LFPNL+  +QKAC L YMVKCLLEAY GRRKVDNRDD  
Sbjct: 371  MLLNNCKYPPAESVEECISNLLFPNLTGFKQKACFLGYMVKCLLEAYTGRRKVDNRDDFR 430

Query: 2198 XXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLSRAF 2019
                          LK+H+KH ER MVK++QRDL  DR LQ IEHYLDASII+NGLSRAF
Sbjct: 431  NKRLELASELLERELKVHLKHVERRMVKAMQRDLYGDRSLQSIEHYLDASIISNGLSRAF 490

Query: 2018 STGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSHWGK 1839
            STG WSHPYKK ERVSGVVA++RRTNPLQ TADMRKTRQQVSY G+VGDARYPH SHWGK
Sbjct: 491  STGGWSHPYKKTERVSGVVASLRRTNPLQMTADMRKTRQQVSYIGKVGDARYPHCSHWGK 550

Query: 1838 ICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSLLDGKYKI 1659
            ICFLSTPDGENCGLVKNLAS+GLVST +L  E L++R  +CG+++L D  SSL+ G++KI
Sbjct: 551  ICFLSTPDGENCGLVKNLASLGLVSTKVL--EPLIERLLDCGLKQLVDHTSSLVHGEHKI 608

Query: 1658 FLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDAGRILRPLLVV 1479
            FLDGDW+G CKDS+ FV++LR KRR  E+P QVEIK+D+HHGE+RIF DAGR+LRPLLVV
Sbjct: 609  FLDGDWIGTCKDSAFFVAELRSKRRNKEIPPQVEIKRDEHHGEIRIFSDAGRVLRPLLVV 668

Query: 1478 QNLKKIKDLKGD-FSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAELDNPPVRYTHC 1302
            +NLKKIKDLKG+ +SFQSLLD G+IE IGPEEEEDC TAW I +L+T   +NP ++YTHC
Sbjct: 669  ENLKKIKDLKGENYSFQSLLDKGIIELIGPEEEEDCPTAWAIDYLYTGNRENPSMKYTHC 728

Query: 1301 ELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRIDTNSHQLYYPQ 1122
            ELD SFLLGLSCG+IP+ANHDHARRVLYQSEKHSQQAIG+STTNPSIR+DTN HQLYYPQ
Sbjct: 729  ELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNIHQLYYPQ 788

Query: 1121 RPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQEDSLVMNRASLE 942
            RPLF T+L+DCL K     H + MLPRPE++NGQCAIVAVNVHLGYNQEDSLVMNRASLE
Sbjct: 789  RPLFCTMLSDCLWKPAYPRH-RGMLPRPEYYNGQCAIVAVNVHLGYNQEDSLVMNRASLE 847

Query: 941  RGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLEDDGFPYVGANLQ 762
            RGMFR+EH+RSYK++++     GKK K +D V FGK  SKIGRVDSL+DDGFP++GA+LQ
Sbjct: 848  RGMFRSEHIRSYKSDIDEKHNLGKKHKSEDEVKFGKMPSKIGRVDSLDDDGFPFIGASLQ 907

Query: 761  TGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFS 582
            TGDIVIGK++ SG DHS+KLKHTERGMVQKVVLS++D+GKNFAVVSLRQVRSP LGDKFS
Sbjct: 908  TGDIVIGKYSESGADHSVKLKHTERGMVQKVVLSADDDGKNFAVVSLRQVRSPSLGDKFS 967

Query: 581  SMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXXXXXXXXXXXL 402
            SMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ                
Sbjct: 968  SMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKGIALGGVQ 1027

Query: 401  KYATPFSTPSVEDITAQLHR 342
            KYATPFS  SV+ +T QLHR
Sbjct: 1028 KYATPFSALSVDAVTDQLHR 1047


>emb|CDP07172.1| unnamed protein product [Coffea canephora]
          Length = 1230

 Score = 1437 bits (3719), Expect = 0.0
 Identities = 717/1047 (68%), Positives = 845/1047 (80%), Gaps = 4/1047 (0%)
 Frame = -3

Query: 3470 IEMGAWDFLEEAG-PSSKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMF 3294
            I M A D ++++G  SSK+   + S  M+I            + +   ++ L E +LK F
Sbjct: 24   ILMDASDAIKDSGIGSSKDNLFDQSLSMDIDDIDFDDFDDMLNSI--TLRELGEDFLKKF 81

Query: 3293 CRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYAS 3114
            C+KAAT+FFE+YG ISHQINSYN+FVK+ IQ+VFDSVGEI VEP FDPSK+GDGDW+YAS
Sbjct: 82   CKKAATAFFEQYGFISHQINSYNNFVKYRIQEVFDSVGEIVVEPGFDPSKRGDGDWKYAS 141

Query: 3113 LKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGL 2934
            +KFGKV LE P  + GEK    +G  E+LK+ PR+ARLQNMTYS+RIKVETH+QVYTK L
Sbjct: 142  IKFGKVILEKPDIWIGEKLFG-EGKNEYLKVLPRHARLQNMTYSARIKVETHVQVYTKKL 200

Query: 2933 SRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVI 2754
             RSDK KTG+  +V+     +   ++I GRLPVMV+S+LCWMN +EK DCEFD GGYF+I
Sbjct: 201  LRSDKAKTGMAEYVENHCEKEEKKEIIIGRLPVMVRSELCWMNEAEKDDCEFDHGGYFII 260

Query: 2753 KGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADKILT 2580
            KGAEKTFIAQEQ+C+ RLW+++ P W V+YRP++KRKRVY+KLV   K E+++G +K+L+
Sbjct: 261  KGAEKTFIAQEQICMIRLWLSRVPNWMVSYRPIAKRKRVYLKLVSNSKFESIIGGEKVLS 320

Query: 2579 VYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEG 2400
            VYF V E+P+W+LFFALG S+DREVV+LI+LDIED+ IANIL  SIYDAD     FR+  
Sbjct: 321  VYFAVAEMPVWILFFALGASSDREVVDLINLDIEDTKIANILTESIYDADDNCTDFRRGK 380

Query: 2399 NAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKV 2220
            NA+ H+  L+K+ K PP E VEECI+N LFPNL+  +QKA  L YMVKCLLEAY GRRKV
Sbjct: 381  NALDHVHKLLKNCKFPPAEPVEECIRNLLFPNLTGFKQKARFLGYMVKCLLEAYTGRRKV 440

Query: 2219 DNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIIT 2040
            DNRDD                LK+H+KHAER MVK+IQ+D+  D EL+ IE Y+DASII+
Sbjct: 441  DNRDDFRNKRLELASELLERELKVHLKHAERRMVKAIQKDIYGDHELRGIETYVDASIIS 500

Query: 2039 NGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYP 1860
            NGLSRAFSTGAWSHPYKKMERVSGVVAT+RRTNPLQ TADMRKTRQQVSYTGRVGDARYP
Sbjct: 501  NGLSRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARYP 560

Query: 1859 HPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSL 1680
            HPSHWGKICFLSTPDGENCGLVKNLAS+GLVSTT+L  ESLL +  +CG++ L DD SS 
Sbjct: 561  HPSHWGKICFLSTPDGENCGLVKNLASLGLVSTTVL--ESLLDKLLDCGLKLLLDDTSSS 618

Query: 1679 LDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFIDAGRI 1500
               ++KIFLDGDW+G CKDS+ FV++L+ KRR  E+P QVEIK+D+ H E+R+F DAGR+
Sbjct: 619  THEEHKIFLDGDWIGTCKDSALFVAELKNKRRSKEIPQQVEIKRDEKHREIRVFSDAGRV 678

Query: 1499 LRPLLVVQNLKKIKDLKG-DFSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAELDNP 1323
            LRPLLVV+NLK+IKDLKG D SFQSLLD G+IE IGPEEEEDC TAW I  L+T   + P
Sbjct: 679  LRPLLVVENLKRIKDLKGEDCSFQSLLDRGIIELIGPEEEEDCVTAWEIGLLYTGSKEKP 738

Query: 1322 PVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRIDTNS 1143
            P++YTHCELD SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIG+STTNPSIR+DTN 
Sbjct: 739  PMKYTHCELDQSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPSIRVDTNI 798

Query: 1142 HQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQEDSLV 963
            HQLYYPQ+PLFRT+L+D LGK     H + MLPRPE+FNGQCAIVAVNVHLGYNQEDSLV
Sbjct: 799  HQLYYPQKPLFRTMLSDSLGKPSYPRH-RGMLPRPEYFNGQCAIVAVNVHLGYNQEDSLV 857

Query: 962  MNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLEDDGFP 783
            MNRASLERGMFR+EH+RSYK++V+  E  GK+ K +D V FGK  SKIGRVDSL+DDGFP
Sbjct: 858  MNRASLERGMFRSEHIRSYKSDVDETENLGKRHKPEDFVKFGKMPSKIGRVDSLDDDGFP 917

Query: 782  YVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSP 603
            ++GA+LQTGDIVIGK++ SG DHS+KLKHTE+GMVQKVVLS+NDEGKNFAVVSLRQVRSP
Sbjct: 918  FIGASLQTGDIVIGKYSESGTDHSVKLKHTEKGMVQKVVLSANDEGKNFAVVSLRQVRSP 977

Query: 602  CLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXXXXXX 423
             LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ         
Sbjct: 978  GLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALAKG 1037

Query: 422  XXXXXXLKYATPFSTPSVEDITAQLHR 342
                   KYATPFST SV+ I  QL R
Sbjct: 1038 IALGGAQKYATPFSTLSVDAIGDQLQR 1064


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score = 1426 bits (3692), Expect = 0.0
 Identities = 723/1087 (66%), Positives = 861/1087 (79%), Gaps = 14/1087 (1%)
 Frame = -3

Query: 3464 MGAWDFLEEAGPSSK--EKFANGSTQMEIXXXXXXXXXXXXDELGSA-MQGLDEGYLKMF 3294
            MGA D   + G SS   EK +NG  QMEI              +GS  +  L++ YLK F
Sbjct: 1    MGASDAKGDLGMSSSMGEKLSNG-VQMEIDDDL----------MGSIEIDDLNKEYLKTF 49

Query: 3293 CRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYAS 3114
            C+K A SFF +YGLI HQINS+NDF+K+GIQ+VFDS GEI VEP +DPSK+G+GDWRYAS
Sbjct: 50   CKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYAS 109

Query: 3113 LKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGL 2934
            ++FGKVTLE P  +AGE     DG +E L   PR+ARLQNMTYSSR+K + H QVYT+ L
Sbjct: 110  VRFGKVTLERPRVWAGES----DG-KESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKL 164

Query: 2933 SRSDKFKTGVEN-FVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFV 2757
             RSDK+KTG +N +V+K V+ + + D++ GR+PVMVKS+LCWMN  E+ DCE+D GGYF+
Sbjct: 165  VRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFL 224

Query: 2756 IKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP-KVENVMGADKILT 2580
            IKGAEKTFIAQEQ+CL RLWV+  PTW VAYRP+ KRKRVY+KL P K EN  G +K+LT
Sbjct: 225  IKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLT 284

Query: 2579 VYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG----F 2412
            VYF  TEIPIW+LFFALG S+D+EVV+LID +I+D+ I+NIL+ASI++AD++ E     F
Sbjct: 285  VYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYF 344

Query: 2411 RKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRG 2232
            R++GNA+  ++ L+KS K PP ES++ECI  YLFPN S  +QKA  L YMVKCLL+AY G
Sbjct: 345  RRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTG 404

Query: 2231 RRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDA 2052
            RRK DNRDD                L++HI+HAER MVK++QR+L  DR+L+PIE+YLDA
Sbjct: 405  RRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDA 464

Query: 2051 SIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGD 1872
            SIITNGLSRAFSTG WSHP+K+MER+SGVVAT+RRTNPLQ TADMRKTRQQV YTG+VGD
Sbjct: 465  SIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGD 524

Query: 1871 ARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDD 1692
            ARYPHPSHWGK+CFLSTPDGENCGLVKNLA  GLVST +L  + L+ +  +CGMEKL DD
Sbjct: 525  ARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVL--DPLVDKLFDCGMEKLVDD 582

Query: 1691 MSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFID 1512
             S+ L GK K+FLDGDWVG+C+D  SFV +LR KRR  E+P QVEIK+D+  GEVRIF D
Sbjct: 583  TSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSD 642

Query: 1511 AGRILRPLLVVQNLKKIKDLKGD-FSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAE 1335
            AGRILRPLLVV+NLKK+K  KGD F+FQSLLD G++E IG EEEEDC TAWGIK+L    
Sbjct: 643  AGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH 702

Query: 1334 LDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRI 1155
             D+PPV+YTHCELD SFLLGLSCG+IP+ANHDHARRVLYQSEKHSQQAIG+STTNP+IR+
Sbjct: 703  -DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRV 761

Query: 1154 DTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQE 975
            DT SHQLYYPQRPLFRT+++DCLGK   S+  K ++PRPE+FNGQ AIVAVNVHLGYNQE
Sbjct: 762  DTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQE 821

Query: 974  DSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLED 795
            DSLVMNRASLERGMFR+EH+RSYK+EV+N E+  KK+K +D V FGK QSKIGRVDSL+D
Sbjct: 822  DSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDD 881

Query: 794  DGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQ 615
            DGFP++GANLQ GDIVIG+ A SGVDHSIKLKHTERGMVQKVV+S+ND+GKNFAVVSLRQ
Sbjct: 882  DGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQ 941

Query: 614  VRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXX 435
            VR+PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ     
Sbjct: 942  VRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA 1001

Query: 434  XXXXXXXXXXLKYATPFSTPSVEDITAQLHR----RSREEQKWRTPHQRKLR*QKLLENH 267
                      L++ATPFST SV+ I  QLHR    R   E+ +       LR    +   
Sbjct: 1002 LGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPT 1061

Query: 266  YFLRIIH 246
            ++ R+IH
Sbjct: 1062 FYQRLIH 1068


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1407 bits (3642), Expect = 0.0
 Identities = 718/1087 (66%), Positives = 853/1087 (78%), Gaps = 14/1087 (1%)
 Frame = -3

Query: 3464 MGAWDFLEEAGPSSK--EKFANGSTQMEIXXXXXXXXXXXXDELGSA-MQGLDEGYLKMF 3294
            MGA D   + G SS   EK +NG  QMEI              +GS  +  L++ YLK F
Sbjct: 37   MGASDAKGDLGMSSSMGEKLSNG-VQMEIDDDL----------MGSIEIDDLNKEYLKTF 85

Query: 3293 CRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYAS 3114
            C+K A SFF +YGLI HQINS+NDF+K+GIQ+VFDS GEI VEP +DPSK+G+GDWRYAS
Sbjct: 86   CKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYAS 145

Query: 3113 LKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGL 2934
            ++FGKVTLE P  +AGE     DG +E L   PR+ARLQNMTYSSR+K + H QVYT+ L
Sbjct: 146  VRFGKVTLERPRVWAGES----DG-KESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKL 200

Query: 2933 SRSDKFKTGVEN-FVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFV 2757
             RSDK+KTG +N +V+K V+ + + D++ GR+PVMVKS+LCWMN  E+ DCE+D GGYF+
Sbjct: 201  VRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFL 260

Query: 2756 IKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP-KVENVMGADKILT 2580
            IKGAEKTFIAQEQ+CL RLWV+  PTW VAYRP+ KRKRVY+KL P K EN  G +K+LT
Sbjct: 261  IKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLT 320

Query: 2579 VYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG----F 2412
            VYF  TEIPIW+LFFALG S+D+EVV+LID +I+D+ I+NIL+ASI++AD++ E     F
Sbjct: 321  VYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYF 380

Query: 2411 RKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRG 2232
            R++GNA+  ++ L+KS K PP ES++ECI  YLFPN S  +QKA  L YMVKCLL+AY G
Sbjct: 381  RRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTG 440

Query: 2231 RRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDA 2052
            RRK DNRDD                L++HI+HAER MVK++QR+L  DR+L+PIE+YLDA
Sbjct: 441  RRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDA 500

Query: 2051 SIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGD 1872
            SIITNGLSRAFSTG WSHP+K+MER+SGVVAT+RRTNPLQ TADMRKTRQQV YTG+VGD
Sbjct: 501  SIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGD 560

Query: 1871 ARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDD 1692
            ARYPHPSHWGK+CFLSTPDGENCGLVKNLA  GLVST +L  + L+ +  +CGMEKL DD
Sbjct: 561  ARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVL--DPLVDKLFDCGMEKLVDD 618

Query: 1691 MSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDKHHGEVRIFID 1512
             S+ L GK K+FLDGDWVG+C+D  SFV +LR KRR  E+P QVEIK+D+  GEVRIF D
Sbjct: 619  TSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSD 678

Query: 1511 AGRILRPLLVVQNLKKIKDLKGD-FSFQSLLDSGVIEFIGPEEEEDCQTAWGIKHLFTAE 1335
            AGRILRPLLVV+NLKK+K  KGD F+FQSLLD G++E IG EEEEDC TAWGIK+L    
Sbjct: 679  AGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH 738

Query: 1334 LDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGYSTTNPSIRI 1155
             D+PPV+YTHCELD SFLLGLSCG+IP+ANHDHARRVLYQSEKHSQQAIG+STTNP+IR+
Sbjct: 739  -DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRV 797

Query: 1154 DTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVAVNVHLGYNQE 975
            DT SHQLYYPQRPLFRT+++D              LPRPE+FNGQ AIVAVNVHLGYNQE
Sbjct: 798  DTLSHQLYYPQRPLFRTMISD--------------LPRPEYFNGQIAIVAVNVHLGYNQE 843

Query: 974  DSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQSKIGRVDSLED 795
            DSLVMNRASLERGMFR+EH+RSYK+EV+N E+  KK+K +D V FGK QSKIGRVDSL+D
Sbjct: 844  DSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDD 903

Query: 794  DGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQ 615
            DGFP++GANLQ GDIVIG+ A SGVDHSIKLKHTERGMVQKVV+S+ND+GKNFAVVSLRQ
Sbjct: 904  DGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQ 963

Query: 614  VRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQXXXXX 435
            VR+PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ     
Sbjct: 964  VRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA 1023

Query: 434  XXXXXXXXXXLKYATPFSTPSVEDITAQLHR----RSREEQKWRTPHQRKLR*QKLLENH 267
                      L++ATPFST SV+ I  QLHR    R   E+ +       LR    +   
Sbjct: 1024 LGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPT 1083

Query: 266  YFLRIIH 246
            ++ R+IH
Sbjct: 1084 FYQRLIH 1090


>gb|KVI06885.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var.
            scolymus]
          Length = 1226

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 694/1067 (65%), Positives = 823/1067 (77%), Gaps = 32/1067 (2%)
 Frame = -3

Query: 3446 LEEAGPSSKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCRKAATSFF 3267
            +EEAGPS KEK +NG+  +++                 +++  DE +LK FCRKA+TSFF
Sbjct: 1    MEEAGPSYKEKPSNGAVHVDLDEEYDDDDDMMD---APSIRDFDEVFLKNFCRKASTSFF 57

Query: 3266 EKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLKFGKVTLE 3087
            + YGLISHQ NSYNDF+K GIQ VFDS+GEI VEP +DPSKKGD +WRYAS+KFGKVTLE
Sbjct: 58   KHYGLISHQTNSYNDFIKVGIQNVFDSIGEIIVEPGYDPSKKGDNEWRYASIKFGKVTLE 117

Query: 3086 HPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSRSDKFKTG 2907
             P F+ GEKFS+ +G +E+L+  PR+ARLQNMTYSSR++V+   QVYT+ L RSDKFKTG
Sbjct: 118  RPRFWTGEKFSTDNG-KEYLEFLPRHARLQNMTYSSRMRVQFTKQVYTQELVRSDKFKTG 176

Query: 2906 VENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKGAEKTFIA 2727
             E ++DK ++     +V  GR+PVMV SD CWM+ +EK DC++DQGGYF+IKGAEKTFIA
Sbjct: 177  KEKYLDKKIVETEEREVFIGRIPVMVNSDTCWMSLAEKDDCDYDQGGYFIIKGAEKTFIA 236

Query: 2726 QEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLV--PKVENVMGADKILTVYFY-VTEI 2556
            QEQ+ L+R+WV  +P W V YR V KRKRVY+KLV  PKV+++ G  +++TVY   + +I
Sbjct: 237  QEQLGLNRVWVAGSPNWRVQYRSVHKRKRVYVKLVDTPKVDDIGGGAQVITVYILSLMDI 296

Query: 2555 PIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVKHIED 2376
            PIW+LFFALGV++D+EVV+LID DI+D  I NILIASI+DAD+  + FRK  N++  ++ 
Sbjct: 297  PIWILFFALGVASDKEVVDLIDADIKDGNIVNILIASIHDADQTCDEFRKGWNSLNFVDQ 356

Query: 2375 LMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRDDXXX 2196
            L+K  K PPKESV+ECI+NYLFPN+    +KA  L YMVKCLLE Y GRRKVDN+DD   
Sbjct: 357  LLKKSKFPPKESVKECIENYLFPNIIGFGRKARYLGYMVKCLLEGYTGRRKVDNKDDFRN 416

Query: 2195 XXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLSRAFS 2016
                         LK+H++HAE  MVKS+QRDL  DR LQ +EHYLDA+IITNGLSRAFS
Sbjct: 417  KRLELAGELLERELKVHLRHAEMRMVKSMQRDLYPDRNLQAMEHYLDAAIITNGLSRAFS 476

Query: 2015 TGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSHWGKI 1836
            TG+WSH YK ME+ SGVVA +RR NPLQ  ADMR+TRQQV Y G+ GDARYPHPSHWGKI
Sbjct: 477  TGSWSHSYKNMEKTSGVVAMLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKI 536

Query: 1835 CFLSTPDGENCGLVKNLASMGLVSTTILQQESLLQRFRECGMEKLDDDMSSLLDGKYKIF 1656
            CFLSTPDGENCGL+KNLA   LVSTT+  +E L      CGMEKL DD S+LL G  K+F
Sbjct: 537  CFLSTPDGENCGLIKNLAGTALVSTTV--RERLSDILLSCGMEKLVDDTSTLLSGLDKVF 594

Query: 1655 LDGDWVGICKDSSSFVSKLRRKRRRMEVPYQV--------------------------EI 1554
            +DGDWVGICK+S+SFV++ RR+RRR EVP+QV                          EI
Sbjct: 595  VDGDWVGICKNSASFVAEFRRRRRRKEVPHQVSFLQLLETVSLACDMQYHACFYPSQVEI 654

Query: 1553 KKDKHHGEVRIFIDAGRILRPLLVVQNLKKIKDLKGD-FSFQSLLDSGVIEFIGPEEEED 1377
            K+D  H EVRIF DAGR++RPLLVVQN  KIK LKG   SFQ LLD+GV+E IGPEEEED
Sbjct: 655  KRDTKHKEVRIFCDAGRVMRPLLVVQNFHKIKTLKGGGCSFQDLLDNGVVELIGPEEEED 714

Query: 1376 CQTAWGIKHLFTAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQ 1197
            C TAW IK+LF     + P +YTHCELD SF+LGLSCG+IPFANHDHA+RVL+QS+KHSQ
Sbjct: 715  CVTAWDIKYLFLENDGHDPSKYTHCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQ 774

Query: 1196 QAIGYSTTNPSIRIDTNSHQLYYPQRPLFRTILADCLGK--SKLSDHQKWMLPRPEFFNG 1023
            QA+GYS TNP IR+DT SHQL+YPQRPLF+T+L+DCL K         K  +PRPEFFNG
Sbjct: 775  QAVGYSCTNPDIRLDTLSHQLFYPQRPLFKTVLSDCLEKPGQPFGQSVKGTIPRPEFFNG 834

Query: 1022 QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVS 843
            QCAIVAVNVHLGYNQEDSLVMN ASL+RGMFR+EH+RSYKAEV+N EA GKK   DD V+
Sbjct: 835  QCAIVAVNVHLGYNQEDSLVMNSASLDRGMFRSEHIRSYKAEVDNKEASGKKNS-DDAVN 893

Query: 842  FGKTQSKIGRVDSLEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 663
            FGK QSKIGRVDSL+DDGFP++GANLQ+GDIVIGKH  SG DHSIKLKHTERGMVQKVVL
Sbjct: 894  FGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGKHTESGSDHSIKLKHTERGMVQKVVL 953

Query: 662  SSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 483
            S+NDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINP
Sbjct: 954  SANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINP 1013

Query: 482  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHR 342
            HAFPSRQTPGQ                +YATPFS+ S++ IT QLHR
Sbjct: 1014 HAFPSRQTPGQMLESALGKGIALGGSQRYATPFSSLSIDAITDQLHR 1060


>gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]
          Length = 1213

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 663/1001 (66%), Positives = 820/1001 (81%), Gaps = 5/1001 (0%)
 Frame = -3

Query: 3329 MQGLDEGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDP 3150
            +  L E  +  FC+KA+ +FF+++GLISHQINSYN+FV +GIQ+VFD++ EI+V P +DP
Sbjct: 49   LHDLGEASVMSFCKKASAAFFKQHGLISHQINSYNNFVTNGIQRVFDAIEEISVNPGYDP 108

Query: 3149 SKKGDGDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIK 2970
            SKKG+G WRYAS+KFGKV LE+P F+ GEKF + +G ++++KL PR+ARLQNMTYS+R+K
Sbjct: 109  SKKGEGGWRYASVKFGKVELEYPMFWTGEKFHA-EGGKDYMKLLPRHARLQNMTYSARLK 167

Query: 2969 VETHLQVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKR 2790
            VET LQ+YT+   +SDKFKTG   ++D+TVL D  ++VI GR+PVMV SD+CWM+  EK 
Sbjct: 168  VETRLQIYTQEKVKSDKFKTGKSEYIDRTVLKDETTEVIVGRVPVMVNSDICWMSKVEKG 227

Query: 2789 DCEFDQGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLV--PK 2616
            DCEFD GGYF++KGAEKTFIAQEQ+CL RLW++  P W VAYR   KR+RV++KLV  PK
Sbjct: 228  DCEFDHGGYFIVKGAEKTFIAQEQICLKRLWISNEPYWKVAYRSEFKRRRVHVKLVENPK 287

Query: 2615 VENVMGADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYD 2436
             EN+ G +K+++VYF + E+PIW+LFFALGVS+D+EVV LID   +D  I+NIL ASI+D
Sbjct: 288  AENIQGGEKVISVYFSIIEVPIWILFFALGVSSDKEVVELIDCSTDDGRISNILFASIHD 347

Query: 2435 ADKKYEGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVK 2256
            AD+K +GFR+   A+++I+ +++  K PP E+  E +  YLFP+LS  +QKA  LAYMVK
Sbjct: 348  ADEKCDGFRRGAKAMEYIDQMIRESKFPPDETTAEYLGKYLFPSLSGNKQKARFLAYMVK 407

Query: 2255 CLLEAYRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQ 2076
            CLL+A+ GRRK DNRDD                L++H++HAE+ MVK++QRDL  +R+LQ
Sbjct: 408  CLLQAFSGRRKCDNRDDFRNKRLECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLQ 467

Query: 2075 PIEHYLDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQV 1896
             IEHYLDASI+TNGL+R+FSTGAW+HP+K+ ERVSGVVA +RRTNPLQ   DMRKTRQQV
Sbjct: 468  SIEHYLDASIVTNGLTRSFSTGAWAHPFKRAERVSGVVANLRRTNPLQTICDMRKTRQQV 527

Query: 1895 SYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASMGLVSTTILQQE--SLLQRFR 1722
            SYTG+VGDARYPHPSHWGKICFLSTPDGENCGLVKN+A+ GLVS++I ++E  SLL+   
Sbjct: 528  SYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNIAATGLVSSSISKEERVSLLETLL 587

Query: 1721 ECGMEKLDDDMSSLLDGKYKIFLDGDWVGICKDSSSFVSKLRRKRRRMEVPYQVEIKKDK 1542
             CGM++L  D S+ L GK K+ +DG+WVG+C DS   V +LRRKRRR  +P QVEIK+D 
Sbjct: 588  RCGMDRLVHDSSTSLSGKDKVLVDGEWVGVCSDSLKVVEELRRKRRRKRLPCQVEIKRDV 647

Query: 1541 HHGEVRIFIDAGRILRPLLVVQNLKKIKDLKGD-FSFQSLLDSGVIEFIGPEEEEDCQTA 1365
             + EVRIF DAGRILRPLLVV+NLK+IK LKGD +SF++LLD G+I+ IG EEEEDC+TA
Sbjct: 648  QNAEVRIFCDAGRILRPLLVVENLKRIKLLKGDEYSFETLLDKGIIDLIGTEEEEDCRTA 707

Query: 1364 WGIKHLFTAELDNPPVRYTHCELDSSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIG 1185
            WGI+ L+  +    PV+Y+HCELD SFLLG+SCG+IPFANHDHARRVLYQSEKHS QAIG
Sbjct: 708  WGIRLLYE-DKGKGPVKYSHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIG 766

Query: 1184 YSTTNPSIRIDTNSHQLYYPQRPLFRTILADCLGKSKLSDHQKWMLPRPEFFNGQCAIVA 1005
            YS+TNP+IR+DT SHQ+YYPQRPLFR++++DCLGK++ S  +  +LP  EFFNGQ  IVA
Sbjct: 767  YSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFFNGQNGIVA 826

Query: 1004 VNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENPEAPGKKQKIDDLVSFGKTQS 825
            VNVHLGYNQEDSLVMNRASLERGMFRT+H+RSYKAEV+N E+  K++K +D VSFGK QS
Sbjct: 827  VNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKESSEKRRKFEDTVSFGKMQS 886

Query: 824  KIGRVDSLEDDGFPYVGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDEG 645
            K+GRVD+L+DDGFPY+GANLQ+GDI+IG+ A SG DHS+KLKHTERGMVQKVVLS+ND+G
Sbjct: 887  KLGRVDNLDDDGFPYIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDG 946

Query: 644  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSR 465
            KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG+LESQENFPFTKQGIVPDIVINPHAFPSR
Sbjct: 947  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSR 1006

Query: 464  QTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITAQLHR 342
            QTPGQ               L+YATPFST SVE IT QLHR
Sbjct: 1007 QTPGQLLEAALGKGIACGGSLRYATPFSTLSVEAITEQLHR 1047