BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004822
         (806 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   294   3e-93
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   259   1e-79
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   165   2e-44
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   143   7e-36
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   136   5e-33
emb|CDP08205.1| unnamed protein product [Coffea canephora]            125   4e-29
gb|KMT18111.1| hypothetical protein BVRB_2g032990 [Beta vulgaris...   117   1e-26
ref|XP_010668902.1| PREDICTED: RNA polymerase sigma factor sigC ...   117   1e-26
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   116   4e-26
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     114   2e-25
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   114   2e-25
gb|AKC88693.1| sigma factor [Pelargonium australe]                    114   2e-25
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   113   4e-25
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   112   8e-25
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   111   2e-24
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   106   3e-24
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   110   8e-24
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   109   9e-24
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   109   9e-24
ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-...   109   1e-23

>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
           indicum]
          Length = 556

 Score =  294 bits (752), Expect = 3e-93
 Identities = 150/200 (75%), Positives = 165/200 (82%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLNDTS 422
           MGFRLNLKW G                   CRGRD+SY L RLSA+S+LYGE ETLND S
Sbjct: 1   MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPCRGRDTSYILARLSASSVLYGETETLNDAS 60

Query: 421 RAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQAT 242
           R HVCSSSPQLLENYYLGTRE+K+A+GKGSSDGL SLL+  I+TSN++DKLAYLTSLQAT
Sbjct: 61  RVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQAT 120

Query: 241 QASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDL 62
           Q SQF+LLMKNLD+LEDMFSDSN VRLERDILEQLERLGALRLF+SCLSRTLKSS S DL
Sbjct: 121 QLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDL 180

Query: 61  SNAPVEIVEERRVNDSVDNH 2
           SNA  E+VEE +VNDSVDNH
Sbjct: 181 SNATTELVEEPKVNDSVDNH 200


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
          Length = 562

 Score =  259 bits (661), Expect = 1e-79
 Identities = 142/203 (69%), Positives = 157/203 (77%), Gaps = 3/203 (1%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLNDTS 422
           MGFRLNL W G                  SCRGRDSSYFL R SAAS++YG+ ETLNDTS
Sbjct: 1   MGFRLNLNWCGLSVQSPLSTSTSSWPTSSSCRGRDSSYFLARSSAASVIYGDTETLNDTS 60

Query: 421 RA-HVCSSSPQLLENYYLG-TRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 248
           R  HV  SS QLLENYYLG  ++ K+ALGKGSSD LYSLLD+DIQ   N+DKL  LTS+Q
Sbjct: 61  RGIHVYPSSHQLLENYYLGGAKQLKVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQ 120

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
           ATQAS+ +LLMKNLD+LEDMF+DSNAVRLE DILEQLERLGALRLFHSCLSRT+KS  S 
Sbjct: 121 ATQASKLRLLMKNLDVLEDMFADSNAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSF 180

Query: 67  DLSNAPVEIVEE-RRVNDSVDNH 2
           DLS+ P EIVEE  RVNDSVDNH
Sbjct: 181 DLSDGPTEIVEECARVNDSVDNH 203


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  165 bits (417), Expect = 2e-44
 Identities = 85/111 (76%), Positives = 97/111 (87%)
 Frame = -2

Query: 355 KMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDS 176
           ++ALGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DS
Sbjct: 13  QVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADS 72

Query: 175 NAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRV 23
           NAVRLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE +V
Sbjct: 73  NAVRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEECKV 123


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  143 bits (361), Expect = 7e-36
 Identities = 90/202 (44%), Positives = 119/202 (58%), Gaps = 2/202 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETL-NDT 425
           MGFRLNLKW                    S +G+++S+   R S  S+   + E+L  D 
Sbjct: 3   MGFRLNLKWD-FPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDP 61

Query: 424 SRAHVCSSSP-QLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 248
            +   CSS   Q  EN Y      KM +GK S   L+ ++ N  Q    +D  A +  LQ
Sbjct: 62  FKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIV-NASQAPIGEDISASVAGLQ 120

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
           A++ASQF LL++NLDILE+MF+DSN VRLERDI+ QL RLGAL+LF  CLSRTLK+S S 
Sbjct: 121 ASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSF 180

Query: 67  DLSNAPVEIVEERRVNDSVDNH 2
           DL +AP E + E + N +VD+H
Sbjct: 181 DLFSAPTEHIRECQTNGTVDDH 202


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  136 bits (342), Expect = 5e-33
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAETL-NDTSRAHVCSSSP-QLLENYYLGTRESKMALGKG 335
           +G+++S+   R S  S+   + E+L  D  +   CSS   Q  EN Y      KM +GK 
Sbjct: 83  QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 334 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 155
           S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN VRLER
Sbjct: 143 SHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 154 DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNH 2
           DI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H
Sbjct: 202 DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDH 252


>emb|CDP08205.1| unnamed protein product [Coffea canephora]
          Length = 599

 Score =  125 bits (313), Expect = 4e-29
 Identities = 71/169 (42%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAET-LNDTSRAHVCSSSPQLLENYYLGTRESKMALGKGS 332
           +G ++ Y   ++S+ S+ YG+  T L+D  R  +CSS+ Q  EN    T + + A+ + S
Sbjct: 72  KGWEAVYESAKMSSFSVAYGDTTTWLSDPMRVKMCSSATQARENDNSETEDMEDAVSRWS 131

Query: 331 SDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERD 152
             G  ++  NDI +S   +   YL SL+ T+A  F LLMKNLD+LE+  +DS  +RLE D
Sbjct: 132 YHGSCNMAHNDISSSRENNNSIYLASLRNTKALHFGLLMKNLDVLEETIADSGVLRLEED 191

Query: 151 ILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDN 5
           IL QLERLGAL LF +CL R LK S   DLS+   + VE  ++N  V++
Sbjct: 192 ILVQLERLGALELFQTCLCRMLKPSTLYDLSDKATKPVEASQINCPVED 240


>gb|KMT18111.1| hypothetical protein BVRB_2g032990 [Beta vulgaris subsp. vulgaris]
          Length = 544

 Score =  117 bits (294), Expect = 1e-26
 Identities = 73/166 (43%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAETLN-DTSRAHVCS-SSPQLLENYYLGTRESKMALGKG 335
           RG++  +   RLS  +I + E+E L+ DT R +  S S+PQ+LEN Y      +M + K 
Sbjct: 27  RGKELDFGSARLSLLTIGFDESEMLHKDTLRPNASSPSAPQILENDYSNL---EMTISKS 83

Query: 334 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 155
           S   L++++ ND Q   ++D   Y+ S+QA  AS F LLM N+++LED  SDS  ++LER
Sbjct: 84  SCKSLHNMI-NDTQVIFDRDTSVYVRSVQACNASHFHLLMDNINVLEDKVSDSELMKLER 142

Query: 154 DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVND 17
           DIL QL RLGAL+LFH+CLSRT+      D+SN   ++ E  RV D
Sbjct: 143 DILVQLGRLGALQLFHACLSRTM------DMSNLQDQVTEHSRVAD 182


>ref|XP_010668902.1| PREDICTED: RNA polymerase sigma factor sigC [Beta vulgaris subsp.
           vulgaris]
          Length = 552

 Score =  117 bits (294), Expect = 1e-26
 Identities = 73/166 (43%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAETLN-DTSRAHVCS-SSPQLLENYYLGTRESKMALGKG 335
           RG++  +   RLS  +I + E+E L+ DT R +  S S+PQ+LEN Y      +M + K 
Sbjct: 35  RGKELDFGSARLSLLTIGFDESEMLHKDTLRPNASSPSAPQILENDYSNL---EMTISKS 91

Query: 334 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 155
           S   L++++ ND Q   ++D   Y+ S+QA  AS F LLM N+++LED  SDS  ++LER
Sbjct: 92  SCKSLHNMI-NDTQVIFDRDTSVYVRSVQACNASHFHLLMDNINVLEDKVSDSELMKLER 150

Query: 154 DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVND 17
           DIL QL RLGAL+LFH+CLSRT+      D+SN   ++ E  RV D
Sbjct: 151 DILVQLGRLGALQLFHACLSRTM------DMSNLQDQVTEHSRVAD 190


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
           tomentosiformis]
          Length = 572

 Score =  116 bits (291), Expect = 4e-26
 Identities = 81/217 (37%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
 Frame = -2

Query: 649 HFAFPLFLAFKKQFLLMGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLS 470
           H  F +FL   +  L MGFRL LKWG                   S +G+++ Y   R  
Sbjct: 2   HIKFQVFLLHSQNLLAMGFRLYLKWG-FSVQPPFSSNSSSWPSSHSFKGKEALYDPARSL 60

Query: 469 AASILYGEAETLNDTSRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQT 290
              I      + +D  R   C S PQL  +    T E K  +G+GS   +Y     DI +
Sbjct: 61  KPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYG----DIGS 116

Query: 289 SNNKDKL--AYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALR 116
             N   L     T L  T+A  F LLMKNLD+LE+MF+DS   RLERDI+ QL++LGAL 
Sbjct: 117 PKNVISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALE 176

Query: 115 LFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDN 5
            FH+CLSRT   S   ++ + P E++EE   +  V N
Sbjct: 177 FFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGN 213


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  114 bits (285), Expect = 2e-25
 Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLNDTS 422
           MGFRLNLKWG                   S RGR++S    RLS  SI+  E ETL    
Sbjct: 1   MGFRLNLKWG-FPIQSHSLPNSPSRLCSSSVRGREASINSARLSFLSIISEEGETLRRVL 59

Query: 421 -RAHVCS-SSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 248
            +A+ CS ++ Q+LE                  + L+S++D++      + K     S++
Sbjct: 60  VKAYACSFAARQMLEK-----------------ENLHSMIDDN---PTEEGKSTSQMSVE 99

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
           A +AS F+LL++NLD+LE  F+DS+ +RLE DIL QLERLGA  LF +CLS+TL+  DS 
Sbjct: 100 ARKASHFRLLVQNLDVLEKTFADSSVLRLESDILLQLERLGARNLFDTCLSKTLE--DSN 157

Query: 67  DLSNAPVEIVEERRVNDSVDN 5
           DLSN P+E +EE++   ++D+
Sbjct: 158 DLSNVPIEHMEEQKTVIAMDD 178


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
           sylvestris]
          Length = 554

 Score =  114 bits (285), Expect = 2e-25
 Identities = 81/201 (40%), Positives = 113/201 (56%), Gaps = 2/201 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 425
           MGFRL+LKWG                   S +G+++ Y   R S    + G+ E + +D 
Sbjct: 1   MGFRLHLKWG-FSVQPPFSSNSSAWPSSHSFKGKEALYDPAR-SLKPFINGDCEPSHSDP 58

Query: 424 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQ 248
            R   C S PQL  +    T E K  +G+GS   +Y  + +D    S + +K +YL++  
Sbjct: 59  FRVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKTGISPDGEKPSYLST-- 116

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
            T+A  F LLMKN+D+LE+MF+DS   RLE DIL QLE+LGAL  FHS LSRTL S+ S 
Sbjct: 117 -TRAPHFSLLMKNIDLLENMFADSEMSRLENDILVQLEKLGALEFFHSRLSRTLHST-SP 174

Query: 67  DLSNAPVEIVEERRVNDSVDN 5
           ++ + P E+VEE   +D V N
Sbjct: 175 EVLDVPRELVEEIEKDDLVGN 195


>gb|AKC88693.1| sigma factor [Pelargonium australe]
          Length = 566

 Score =  114 bits (285), Expect = 2e-25
 Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 9/199 (4%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLNDTS 422
           MG RLNLKW                    S RG+++S+   RL   S +  E E  +  S
Sbjct: 1   MGLRLNLKWDIPIHSRSFPTSPSRLPSSSSVRGKEASFNGTRLLFLSFIPDEGENSHSHS 60

Query: 421 RAH--------VCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLA 266
            +H          S++PQ L+N ++  R+  M + K S  GL+S ++ D +    +   +
Sbjct: 61  HSHRETLKVYASSSAAPQTLDNDFIELRD--MQINKRSYSGLHSTIE-DSRRHTEEGISS 117

Query: 265 YLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCL-SRT 89
              SL+A + + F +LM+NLD+LE+ F+DSNA+RLERDIL+Q+ERLGAL+LF+ CL SRT
Sbjct: 118 SRASLRACRPAHFGMLMENLDVLEETFADSNALRLERDILQQVERLGALKLFNICLSSRT 177

Query: 88  LKSSDSIDLSNAPVEIVEE 32
           +++S+ +DL +  +E +++
Sbjct: 178 IETSNVVDLFDVSIEGIKD 196


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
           tuberosum]
          Length = 555

 Score =  113 bits (283), Expect = 4e-25
 Identities = 80/201 (39%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 425
           MGFRL+LKWG                   S +GR++ Y   R S    + G+ E + +D 
Sbjct: 1   MGFRLHLKWG-FSVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDP 58

Query: 424 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQ 248
            R   C S PQL  +    T E K   G+GS   +Y  +  + I  S + +K  YL +  
Sbjct: 59  FRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNT-- 116

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
            T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 117 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP 175

Query: 67  DLSNAPVEIVEERRVNDSVDN 5
            + + P E+++E   +D V N
Sbjct: 176 KVLDVPRELIKEVEKDDLVGN 196


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  112 bits (281), Expect = 8e-25
 Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 4/204 (1%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAETLN-DT 425
           +GFRLNLK G                   S RGR+ S+   RLS  S++  E E  + D 
Sbjct: 3   LGFRLNLKCGFPVHSSYWQTTSPSKLSSTSVRGREGSFNSARLSFLSVISEEGEASSKDP 62

Query: 424 SRAHVC-SSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTS-- 254
            + + C S+SPQ+LE+   G  E + A  +       S+ DN +  +  K    +++S  
Sbjct: 63  LKVYTCPSASPQILED---GVSEMEEAAFRRVPK---SISDNRMPVAEGK----FISSKG 112

Query: 253 LQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSD 74
           L+A  AS F LL++NL++LE+ F+ SN ++LE++IL QL RLGAL+LF  CLSRTLK+S 
Sbjct: 113 LEACTASHFSLLLQNLNVLEETFATSNVLKLEKEILLQLARLGALKLFDICLSRTLKTSS 172

Query: 73  SIDLSNAPVEIVEERRVNDSVDNH 2
            +DLS+ P   VEE ++    DN+
Sbjct: 173 FLDLSDIPTVPVEEGKMERKEDNN 196


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
          Length = 551

 Score =  111 bits (278), Expect = 2e-24
 Identities = 80/201 (39%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 425
           MGFRL+LKWG                   S +GR++ Y   R S    + G+ E + +D 
Sbjct: 1   MGFRLHLKWG-FSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDP 58

Query: 424 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSN-NKDKLAYLTSLQ 248
            R   C S PQL  +    T E+K   G+GS   +Y     DI +   + +K  YL +  
Sbjct: 59  FRVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYG----DIGSYKIDGEKPTYLNT-- 112

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
            T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 113 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFP 171

Query: 67  DLSNAPVEIVEERRVNDSVDN 5
            + + P E+++E   +D V N
Sbjct: 172 KVLDVPRELIKEVEKDDLVGN 192


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
           sylvestris]
          Length = 584

 Score =  106 bits (265), Expect(2) = 3e-24
 Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAE-TLNDTSRAHVCSSSPQLLENYYLGTRESKMALGKGS 332
           +G+++ Y   R S    + G+ E + +D  R   C S PQL  +    T E K  +G+GS
Sbjct: 61  KGKEALYDPAR-SLKPFINGDCEPSHSDPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGS 119

Query: 331 SDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 155
              +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS   RLE 
Sbjct: 120 PSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEMSRLEN 176

Query: 154 DILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDN 5
           DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N
Sbjct: 177 DILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGN 225



 Score = 33.5 bits (75), Expect(2) = 3e-24
 Identities = 19/30 (63%), Positives = 20/30 (66%)
 Frame = -3

Query: 600 WVLG*TSNGVVFQSSPLSPQVLHLGLPHIL 511
           WVLG TSNGV   S+PLSP     GL HIL
Sbjct: 19  WVLGCTSNGVSL-SNPLSPPTHQHGLLHIL 47


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  110 bits (274), Expect = 8e-24
 Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 5/223 (2%)
 Frame = -2

Query: 685 FLLFTISILFDGHFAFPLFLAFKKQFLLMGFRLNLKWGGXXXXXXXXXXXXXXXXXXSC- 509
           FLL     L D +F+F  F +  K  + +GFRL+LK G                   S  
Sbjct: 18  FLLSIFKDLMD-YFSFHSFFSSLKTKMGLGFRLSLKLGFPFHSQFHVNSPSRLSSSPSAV 76

Query: 508 RGRDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSSSP-QLLENYYLGTRESKMALGKG 335
           +GR+ S  + RLS  S++  E + L+ D  + +  SSS  Q LEN +    E+K+++GK 
Sbjct: 77  KGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVGKR 136

Query: 334 SSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVRLER 155
           S  GL   +D D Q    +D     +S +  + S F LL++NL+ILE+ F+DS+ ++LER
Sbjct: 137 SLSGLNDTID-DAQVFIKEDDFVPPSSSK-DRTSNFSLLLENLNILEESFADSDVLKLER 194

Query: 154 DILEQLERLGALRLFHSCLSRTL--KSSDSIDLSNAPVEIVEE 32
           DIL QL +LGAL+LF++CL+RTL  ++++ +D S+ P E ++E
Sbjct: 195 DILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQE 237


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  109 bits (273), Expect = 9e-24
 Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILYGEAE-TLNDT 425
           MGFRL+LKWG                   S +GR++ Y   R S    + G+ E + +D 
Sbjct: 1   MGFRLHLKWG-FSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDP 58

Query: 424 SRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSN-NKDKLAYLTSLQ 248
            R   C S PQL  +    T E+K   G+GS   +Y     DI +   + +K  Y+ +  
Sbjct: 59  FRVQTCLSDPQLWTSDASVTIETKTRNGRGSPSNVYG----DIGSYKIDGEKPTYINT-- 112

Query: 247 ATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSI 68
            T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  SS   
Sbjct: 113 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP 171

Query: 67  DLSNAPVEIVEERRVNDSVDN 5
            + + P E+++E   +D V N
Sbjct: 172 KVLDVPRELIKEVEKDDLVGN 192


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  109 bits (273), Expect = 9e-24
 Identities = 77/204 (37%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = -2

Query: 601 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXSCRGRDSSYFLVRLSAASILY--GEAETLND 428
           +GFRLNLK G                   S RGR+ S+   RLS  S++   GEA + + 
Sbjct: 3   LGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSKDP 62

Query: 427 TSRAHVCSSSPQLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTS-- 254
                  S+SPQ+LE+      E K A  +       S  DN +  +  K    +++S  
Sbjct: 63  LKVYTFPSASPQILEDGVSELEEVKTAFRRVPK----SFSDNQMPVAEGK----FISSKG 114

Query: 253 LQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKSSD 74
           L+A  AS F LL++NL++LE+ F+ S+ ++LE++IL QL RLGAL+LF  CLSRTLK+S 
Sbjct: 115 LEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSS 174

Query: 73  SIDLSNAPVEIVEERRVNDSVDNH 2
            +DLS+ P   VEE ++    DN+
Sbjct: 175 FLDLSDIPTVPVEEGKMERKEDNN 198


>ref|XP_008365120.1| PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica]
          Length = 559

 Score =  109 bits (273), Expect = 1e-23
 Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
 Frame = -2

Query: 508 RGRDSSYFLVRLSAASILYGEAETLN-DTSRAHVCSS-SPQLLENYYLGTRESKMA-LGK 338
           RGR+ S+   RLS  SI+  E ET   DT + + CSS SPQ+LE+ +    E +   + K
Sbjct: 36  RGREGSFNSARLSFLSIISEEGETSGKDTLKIYSCSSASPQILEDGFSNLEEIRFRRVPK 95

Query: 337 GSSD---GLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 167
            SS    G   + D D ++S           L+A  A+ F LL+KNLD LE+ F++S+ +
Sbjct: 96  SSSSNTTGNNQMPDGDFRSSKG---------LEACSAAHFSLLLKNLDALEETFANSDVL 146

Query: 166 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDN 5
           +LE +IL QL RLGAL+LF++ LSRTL SS   DLS+ P   +EE +++  VDN
Sbjct: 147 KLENEILSQLGRLGALQLFNAYLSRTLTSSSFXDLSDIPTVPIEEYKMDKKVDN 200