BLASTX nr result
ID: Rehmannia28_contig00004802
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00004802
(788 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015163957.1| PREDICTED: probable receptor-like protein ki... 87 4e-16
ref|XP_010108259.1| Retrovirus-related Pol polyprotein from tran... 86 1e-15
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 85 5e-15
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 82 4e-14
ref|XP_009602612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 81 6e-14
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 80 1e-13
emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera] 76 4e-13
gb|KYP42262.1| Retrovirus-related Pol polyprotein from transposo... 77 2e-12
gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposo... 77 2e-12
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 77 2e-12
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 77 3e-12
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 76 3e-12
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 76 3e-12
gb|AIC77183.1| polyprotein [Gossypium barbadense] 76 4e-12
ref|XP_007038256.1| Uncharacterized protein TCM_014834 [Theobrom... 76 4e-12
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 76 5e-12
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi... 76 5e-12
gb|KRY06569.1| Retrovirus-related Pol polyprotein from transposo... 75 5e-12
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 75 5e-12
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 75 6e-12
>ref|XP_015163957.1| PREDICTED: probable receptor-like protein kinase At3g17420 [Solanum
tuberosum]
Length = 380
Score = 86.7 bits (213), Expect = 4e-16
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = -1
Query: 380 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 201
KS+ F+KF+EFK E EK+ H++ LRSDRGGEYLS+EF YL++ GI SQ SA GTPQQ
Sbjct: 31 KSECFEKFKEFKIETEKRHDKHIQTLRSDRGGEYLSAEFIKYLSESGITSQYSAPGTPQQ 90
Query: 200 NGV 192
NGV
Sbjct: 91 NGV 93
>ref|XP_010108259.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587931412|gb|EXC18499.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 414
Score = 85.9 bits (211), Expect = 1e-15
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -1
Query: 380 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 201
KS+ F KF+EF+AE EKQLG +K RSDR GEY+ EF+ +L +EG+VSQL+A GTPQQ
Sbjct: 58 KSETFGKFREFRAEVEKQLGKPIKTPRSDREGEYMDQEFRDFLIEEGVVSQLTAPGTPQQ 117
Query: 200 NGV 192
NGV
Sbjct: 118 NGV 120
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 84.7 bits (208), Expect = 5e-15
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS++F+KF+E+KAE E ++G +K LRSDRGGEY+ S+F+ YL + GI SQLSA TPQ
Sbjct: 541 HKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQ 600
Query: 203 QNGV 192
QNGV
Sbjct: 601 QNGV 604
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 82.0 bits (201), Expect = 4e-14
Identities = 38/63 (60%), Positives = 51/63 (80%)
Frame = -1
Query: 380 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 201
KS+ F+KF+ FKAE E++ G ++K LRSD GGEY+S EF ++L+++GI SQLSA G PQQ
Sbjct: 861 KSECFEKFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLSEQGITSQLSAPGMPQQ 920
Query: 200 NGV 192
NGV
Sbjct: 921 NGV 923
>ref|XP_009602612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104097704 [Nicotiana tomentosiformis]
Length = 445
Score = 80.9 bits (198), Expect = 6e-14
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -1
Query: 398 LMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 219
+ + KS+ F++F+EFK E EK+ ++K LRSDRGGEYLS++F YL+ GI SQLSA
Sbjct: 237 IYLLHRKSECFEQFKEFKTETEKRHDKYIKTLRSDRGGEYLSAKFIKYLSDCGITSQLSA 296
Query: 218 SGTPQQNGV 192
TPQQNGV
Sbjct: 297 PATPQQNGV 305
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 80.5 bits (197), Expect = 1e-13
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS F+KF+EFK E E QLG +K LRSDRGGEYLS EF YL + GIVSQL+ TPQ
Sbjct: 511 HKSDTFEKFKEFKNEVENQLGRKIKMLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQ 570
Query: 203 QNGV 192
NGV
Sbjct: 571 LNGV 574
>emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera]
Length = 225
Score = 76.3 bits (186), Expect = 4e-13
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = -1
Query: 380 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 201
KS DKF E KAE+ QLG +K LRS+R GEY+S++F S+L + I+SQLSA GTPQQ
Sbjct: 58 KSDTLDKFIELKAESRNQLGKRIKALRSNRVGEYMSTQFDSFLKEHEIISQLSAPGTPQQ 117
Query: 200 NG 195
NG
Sbjct: 118 NG 119
>gb|KYP42262.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 656
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS++F+ F+ F++E EKQ G ++K LRSDRGGEYLS++F +L + GI+SQ GTPQ
Sbjct: 462 HKSESFEMFKRFRSEVEKQTGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWKPPGTPQ 521
Query: 203 QNGV 192
NGV
Sbjct: 522 HNGV 525
>gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 830
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS++F+ F+ F++E EKQ G ++K LRSDRGGEYLS++F +L + GI+SQ GTPQ
Sbjct: 309 HKSESFEMFKRFRSEVEKQTGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWKPPGTPQ 368
Query: 203 QNGV 192
NGV
Sbjct: 369 HNGV 372
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KSK+F+ F+EF+ E + Q G +K LRSDRGGEYLS F +L + GIVSQL+ GTPQ
Sbjct: 180 HKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQ 239
Query: 203 QNGV 192
NGV
Sbjct: 240 WNGV 243
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS++F+KF+EF+ E + QLG +K LRSDRGGE+LS EF ++L Q GIV QL+ TPQ
Sbjct: 624 HKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQ 683
Query: 203 QNGV 192
NGV
Sbjct: 684 WNGV 687
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 76.3 bits (186), Expect = 3e-12
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
NKS+ F+ F+ +KAE E QLG ++K LRSDRGGEY SSEF S+ + GI+ + +A TPQ
Sbjct: 427 NKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQ 486
Query: 203 QNGV 192
NG+
Sbjct: 487 HNGI 490
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 76.3 bits (186), Expect = 3e-12
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
NKS+ F+ F+ +KAE E QLG ++K LRSDRGGEY SSEF S+ + GI+ + +A TPQ
Sbjct: 489 NKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQ 548
Query: 203 QNGV 192
NG+
Sbjct: 549 HNGI 552
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -1
Query: 392 IYFNKSK--AFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 219
+YF K+K A +KF+EFKA EKQ G +LK LRSDRGGEY + ++S+ GI+ QL+A
Sbjct: 579 VYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTA 638
Query: 218 SGTPQQNGV 192
TPQQNGV
Sbjct: 639 RRTPQQNGV 647
>ref|XP_007038256.1| Uncharacterized protein TCM_014834 [Theobroma cacao]
gi|508775501|gb|EOY22757.1| Uncharacterized protein
TCM_014834 [Theobroma cacao]
Length = 996
Score = 75.9 bits (185), Expect = 4e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Frame = -1
Query: 392 IYF--NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSA 219
IYF +KS+ F FQ+FKA+ E + G +K+LR+D GGEY SSEF SYL EGI QL+A
Sbjct: 347 IYFIQHKSEVFSIFQKFKAKVENESGCRIKKLRTDNGGEYTSSEFTSYLENEGIHHQLTA 406
Query: 218 SGTPQQNGV 192
P+QNGV
Sbjct: 407 PYCPEQNGV 415
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/91 (46%), Positives = 59/91 (64%)
Frame = -1
Query: 464 SSHGAFESHFKFSRKFV*FL*CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGG 285
++ G F F F+ F + + + +KS++F+KF+EF E + LG +K LRSDRGG
Sbjct: 486 TARGGFGYFFTFTDDFSRYG-YVYLMRHKSESFEKFKEFHNEVQNHLGKTIKYLRSDRGG 544
Query: 284 EYLSSEFKSYLTQEGIVSQLSASGTPQQNGV 192
EYLS EF ++L + GIV QL+ GTPQ NGV
Sbjct: 545 EYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 575
>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -1
Query: 380 KSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQQ 201
KS+AF KF+ FKA E++ G +K LR+DRGGE+LS EF+++ +EGI+ L+A TPQQ
Sbjct: 490 KSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQ 549
Query: 200 NGV 192
NGV
Sbjct: 550 NGV 552
>gb|KRY06569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trichinella patagoniensis]
Length = 618
Score = 75.5 bits (184), Expect = 5e-12
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = -1
Query: 383 NKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLSASGTPQ 204
+KS+ F+KF+EF++E E Q +K LRSDRGGE+LS EF ++L + GIVSQL+ GTPQ
Sbjct: 3 HKSETFEKFKEFQSEVENQRDRKIKFLRSDRGGEHLSHEFGAHLRKCGIVSQLTPPGTPQ 62
Query: 203 QNGV 192
+NGV
Sbjct: 63 RNGV 66
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 75.5 bits (184), Expect = 5e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -1
Query: 401 CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLS 222
C+ + +KS++F+KF+EF+ E + LG +K LRSDRGGEYLS EF ++L + GI+ QL+
Sbjct: 285 CVYLMRHKSESFEKFKEFQNEVQNNLGKTIKYLRSDRGGEYLSLEFGNHLKECGIIPQLT 344
Query: 221 ASGTPQQNGV 192
GTPQ N V
Sbjct: 345 PPGTPQWNWV 354
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 75.5 bits (184), Expect = 6e-12
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = -1
Query: 401 CLMIYFNKSKAFDKFQEFKAEAEKQLGVHLKQLRSDRGGEYLSSEFKSYLTQEGIVSQLS 222
C+ + +KS++F+KF+EF+ E + LG +K LRSDRGGEYLS EF ++L + GI+ QL+
Sbjct: 395 CVYLMRHKSESFEKFKEFQNEVQNNLGKTIKYLRSDRGGEYLSLEFGNHLKECGIIPQLT 454
Query: 221 ASGTPQQNGV 192
GTPQ N V
Sbjct: 455 PPGTPQWNWV 464