BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004615
         (432 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829544.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-32
ref|XP_011101111.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-31
ref|XP_009784787.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-19
ref|XP_009606850.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-19
ref|XP_009606848.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-19
emb|CDP07298.1| unnamed protein product [Coffea canephora]             89   5e-18
ref|XP_015085397.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-16
ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-16
ref|XP_015163893.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-15
ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-15
gb|EPS69249.1| hypothetical protein M569_05516, partial [Genlise...    81   2e-15
ref|XP_006577944.1| PREDICTED: pentatricopeptide repeat-containi...    78   3e-14
ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containi...    78   3e-14
gb|KRH60945.1| hypothetical protein GLYMA_04G018000 [Glycine max]      78   3e-14
gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]    77   6e-14
gb|KOM51718.1| hypothetical protein LR48_Vigan09g037700 [Vigna a...    77   8e-14
ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-13
ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-13
gb|KVI07272.1| Pentatricopeptide repeat-containing protein [Cyna...    76   2e-13
ref|XP_015934054.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-13

>ref|XP_012829544.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Erythranthe guttata]
           gi|604297234|gb|EYU17498.1| hypothetical protein
           MIMGU_mgv1a002335mg [Erythranthe guttata]
          Length = 687

 Score =  129 bits (325), Expect = 2e-32
 Identities = 66/87 (75%), Positives = 74/87 (85%), Gaps = 4/87 (4%)
 Frame = -2

Query: 251 LLSAASQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTHDNS----SQPDPPTT 84
           LLSAASQQLN+ ++N +DE+DPYDVA LPNP YDF PLL FLST + +    SQPDPP+ 
Sbjct: 34  LLSAASQQLNIKTIN-EDEQDPYDVASLPNPNYDFTPLLTFLSTTNYNPSEPSQPDPPSR 92

Query: 83  LDPAELRLAESYGAVPAPLWHSLIKNL 3
           LDPAELRLAESYGAVPAPLWHSLIKNL
Sbjct: 93  LDPAELRLAESYGAVPAPLWHSLIKNL 119


>ref|XP_011101111.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Sesamum indicum]
          Length = 689

 Score =  127 bits (318), Expect = 2e-31
 Identities = 64/86 (74%), Positives = 73/86 (84%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 LLSAASQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTH---DNSSQPDPPTTL 81
           L S +SQ LNLT++NGD E+DPYDVA LPNP YDF+PLL+FLST+    + SQPDPPT L
Sbjct: 37  LSSGSSQHLNLTTINGD-EQDPYDVACLPNPHYDFSPLLNFLSTNYSPSHLSQPDPPTRL 95

Query: 80  DPAELRLAESYGAVPAPLWHSLIKNL 3
           +PAELRLAESY AVPAPLWHSLIKNL
Sbjct: 96  EPAELRLAESYRAVPAPLWHSLIKNL 121


>ref|XP_009784787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Nicotiana sylvestris]
           gi|698474688|ref|XP_009784788.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Nicotiana sylvestris]
          Length = 710

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
 Frame = -2

Query: 236 SQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTH---DNSSQPDPPTTLDPAEL 66
           S+Q N+ ++  ++E + +DV L PN +YDF PLL FLST+   + +S    PT LDPAEL
Sbjct: 63  SKQFNIDNLEVEEEDENHDVVLYPNRRYDFTPLLQFLSTYTPTEPNSDTSSPTQLDPAEL 122

Query: 65  RLAESYGAVPAPLWHSLIKNL 3
           +LAESY AVPAP+WHSL+KNL
Sbjct: 123 KLAESYRAVPAPVWHSLLKNL 143


>ref|XP_009606850.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X2 [Nicotiana tomentosiformis]
          Length = 698

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = -2

Query: 236 SQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTH---DNSSQPDPPTTLDPAEL 66
           S+Q N+ ++  ++E + YDV   PN +YDF PL+ FLST+   + +S    PT LDPAEL
Sbjct: 63  SKQFNIDNLEVEEEEEEYDVVSYPNRRYDFTPLIQFLSTYTPTEPNSDTTSPTQLDPAEL 122

Query: 65  RLAESYGAVPAPLWHSLIKNL 3
           +LAESY AVPAP+WHSL+KNL
Sbjct: 123 KLAESYRAVPAPVWHSLLKNL 143


>ref|XP_009606848.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Nicotiana tomentosiformis]
           gi|697106032|ref|XP_009606849.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Nicotiana tomentosiformis]
          Length = 710

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = -2

Query: 236 SQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTH---DNSSQPDPPTTLDPAEL 66
           S+Q N+ ++  ++E + YDV   PN +YDF PL+ FLST+   + +S    PT LDPAEL
Sbjct: 63  SKQFNIDNLEVEEEEEEYDVVSYPNRRYDFTPLIQFLSTYTPTEPNSDTTSPTQLDPAEL 122

Query: 65  RLAESYGAVPAPLWHSLIKNL 3
           +LAESY AVPAP+WHSL+KNL
Sbjct: 123 KLAESYRAVPAPVWHSLLKNL 143


>emb|CDP07298.1| unnamed protein product [Coffea canephora]
          Length = 735

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
 Frame = -2

Query: 245 SAASQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLST----HDNSSQPDPPTTLD 78
           S +S QL+L +   +D+ D  DVA L N +YDF+PLL FLST    H NSS  D PT L 
Sbjct: 85  SLSSHQLSLDNRQEEDD-DQDDVASLNNRRYDFSPLLQFLSTYTPDHSNSSA-DSPTQLH 142

Query: 77  PAELRLAESYGAVPAPLWHSLIKNL 3
           PAELRLAESY AVPAPLWHSL+K+L
Sbjct: 143 PAELRLAESYRAVPAPLWHSLLKSL 167


>ref|XP_015085397.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Solanum pennellii]
          Length = 700

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -2

Query: 236 SQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLA 57
           S Q N++    ++E +  DV    N +YDF  LL FLST + +S    PT LDP ELRLA
Sbjct: 55  SNQFNISIEEEEEEEEEDDVGSYSNHRYDFTRLLQFLSTTEPNSDNSSPTQLDPTELRLA 114

Query: 56  ESYGAVPAPLWHSLIKNL 3
           ESY AVPAPLWHSL+K+L
Sbjct: 115 ESYRAVPAPLWHSLLKDL 132


>ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Solanum lycopersicum]
          Length = 699

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 43/78 (55%), Positives = 53/78 (67%)
 Frame = -2

Query: 236 SQQLNLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLA 57
           S Q N+ S+  ++E +  DV    N +YDF  LL FLST + +S    PT LDP ELRLA
Sbjct: 55  SNQFNI-SIEEEEEEEDDDVGSYSNQRYDFTRLLQFLSTTEPNSDNSSPTQLDPTELRLA 113

Query: 56  ESYGAVPAPLWHSLIKNL 3
           ESY AVPAPLWHSL+K+L
Sbjct: 114 ESYRAVPAPLWHSLLKDL 131


>ref|XP_015163893.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X2 [Solanum tuberosum]
          Length = 590

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = -2

Query: 224 NLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLAESYG 45
           N  ++  ++E + Y +    N +YDF PLL FLST + +S    PT L P ELRLAESY 
Sbjct: 56  NQFNIEEEEEDEEYHIGSYSNQRYDFTPLLQFLSTTEPNSDNSSPTQLHPTELRLAESYR 115

Query: 44  AVPAPLWHSLIKNL 3
           AVPAPLWHSL+K L
Sbjct: 116 AVPAPLWHSLLKGL 129


>ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Solanum tuberosum]
          Length = 697

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = -2

Query: 224 NLTSVNGDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLAESYG 45
           N  ++  ++E + Y +    N +YDF PLL FLST + +S    PT L P ELRLAESY 
Sbjct: 56  NQFNIEEEEEDEEYHIGSYSNQRYDFTPLLQFLSTTEPNSDNSSPTQLHPTELRLAESYR 115

Query: 44  AVPAPLWHSLIKNL 3
           AVPAPLWHSL+K L
Sbjct: 116 AVPAPLWHSLLKGL 129


>gb|EPS69249.1| hypothetical protein M569_05516, partial [Genlisea aurea]
          Length = 642

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 38/54 (70%), Positives = 47/54 (87%), Gaps = 1/54 (1%)
 Frame = -2

Query: 161 PQYDFAPLLDFLSTHDNSSQPDP-PTTLDPAELRLAESYGAVPAPLWHSLIKNL 3
           P+YDFAPLL+FLS +++S + D  PT++D AELRLAESY AVPAPLWHSL+KNL
Sbjct: 9   PRYDFAPLLEFLSGYESSGEADDSPTSIDAAELRLAESYSAVPAPLWHSLLKNL 62


>ref|XP_006577944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X2 [Glycine max]
          Length = 573

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 46/65 (70%)
 Frame = -2

Query: 197 ERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLAESYGAVPAPLWHS 18
           E  P D+  L N +YDF PLL FLST  NSS   PPT+LD  E +LAESY AVPAPLWH+
Sbjct: 48  EEGPDDILSLHNRRYDFTPLLSFLSTTSNSS---PPTSLDSTEFQLAESYRAVPAPLWHA 104

Query: 17  LIKNL 3
            +K+L
Sbjct: 105 FLKSL 109


>ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Glycine max]
           gi|955314798|ref|XP_006577943.2| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Glycine max]
           gi|947112641|gb|KRH60943.1| hypothetical protein
           GLYMA_04G018000 [Glycine max]
           gi|947112642|gb|KRH60944.1| hypothetical protein
           GLYMA_04G018000 [Glycine max]
          Length = 680

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 46/65 (70%)
 Frame = -2

Query: 197 ERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLAESYGAVPAPLWHS 18
           E  P D+  L N +YDF PLL FLST  NSS   PPT+LD  E +LAESY AVPAPLWH+
Sbjct: 48  EEGPDDILSLHNRRYDFTPLLSFLSTTSNSS---PPTSLDSTEFQLAESYRAVPAPLWHA 104

Query: 17  LIKNL 3
            +K+L
Sbjct: 105 FLKSL 109


>gb|KRH60945.1| hypothetical protein GLYMA_04G018000 [Glycine max]
          Length = 682

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 46/65 (70%)
 Frame = -2

Query: 197 ERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDPPTTLDPAELRLAESYGAVPAPLWHS 18
           E  P D+  L N +YDF PLL FLST  NSS   PPT+LD  E +LAESY AVPAPLWH+
Sbjct: 48  EEGPDDILSLHNRRYDFTPLLSFLSTTSNSS---PPTSLDSTEFQLAESYRAVPAPLWHA 104

Query: 17  LIKNL 3
            +K+L
Sbjct: 105 FLKSL 109


>gb|KHG22213.1| hypothetical protein F383_28108 [Gossypium arboreum]
          Length = 706

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 GDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDP----PTTLDPAELRLAESYGAV 39
           GD+  D  DV  L   +YDF PLL++LS  +++S  D     PT+LDP E +LAESY AV
Sbjct: 62  GDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASDSDSDSASPTSLDPIEFQLAESYRAV 121

Query: 38  PAPLWHSLIKNL 3
           PAPLWHSL+K+L
Sbjct: 122 PAPLWHSLLKSL 133


>gb|KOM51718.1| hypothetical protein LR48_Vigan09g037700 [Vigna angularis]
           gi|965661916|dbj|BAT77625.1| hypothetical protein
           VIGAN_02021300 [Vigna angularis var. angularis]
          Length = 687

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
 Frame = -2

Query: 197 ERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPD--PPTTLDPAELRLAESYGAVPAPLW 24
           E  P DV    N +YDF PLL FLS  D +S  D  PPT+LD  E +LAESY AVPAPLW
Sbjct: 53  EEGPDDVLSFHNRRYDFTPLLHFLSNSDPNSDSDSAPPTSLDSTEFQLAESYRAVPAPLW 112

Query: 23  HSLIKNL 3
           H+L+K+L
Sbjct: 113 HALLKSL 119


>ref|XP_012464758.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X2 [Gossypium raimondii]
           gi|763746834|gb|KJB14273.1| hypothetical protein
           B456_002G117100 [Gossypium raimondii]
          Length = 701

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 GDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDP----PTTLDPAELRLAESYGAV 39
           GD+  D  DV  L   +YDF PLL++LS  +++S  D     PT+LDP E +LAESY AV
Sbjct: 57  GDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASDLDSDSASPTSLDPIEFQLAESYRAV 116

Query: 38  PAPLWHSLIKNL 3
           PAPLWHSL+K+L
Sbjct: 117 PAPLWHSLLKSL 128


>ref|XP_012464747.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Gossypium raimondii]
           gi|823132894|ref|XP_012464753.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial isoform X1 [Gossypium raimondii]
          Length = 709

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 GDDERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPDP----PTTLDPAELRLAESYGAV 39
           GD+  D  DV  L   +YDF PLL++LS  +++S  D     PT+LDP E +LAESY AV
Sbjct: 57  GDENDDENDVLSLHKRRYDFTPLLNYLSRSNSASDLDSDSASPTSLDPIEFQLAESYRAV 116

Query: 38  PAPLWHSLIKNL 3
           PAPLWHSL+K+L
Sbjct: 117 PAPLWHSLLKSL 128


>gb|KVI07272.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 672

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -2

Query: 218 TSVNGDDERDPYDV-ALLPNPQYDFAPLLDFLSTHDN---SSQPDPPTTLDPAELRLAES 51
           +S++ DD     DV +L P+ +YDF+PLL FLST+++   S+  + P +LD AELRLAES
Sbjct: 48  SSLSEDDTITQADVVSLYPHRRYDFSPLLQFLSTYNSDSDSASSNSPASLDQAELRLAES 107

Query: 50  YGAVPAPLWHSLIKNL 3
           Y  VPAPLWH+L+K+L
Sbjct: 108 YRVVPAPLWHALLKSL 123


>ref|XP_015934054.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Arachis duranensis]
          Length = 687

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = -2

Query: 197 ERDPYDVALLPNPQYDFAPLLDFLSTHDNSSQPD---PPTTLDPAELRLAESYGAVPAPL 27
           +  P D+  L N +YDF PLL+FLS++ NS   +    PT LDP E +LAESY AVPAPL
Sbjct: 52  DEGPNDILPLQNRRYDFTPLLNFLSSNSNSEPENNSPSPTQLDPTEFQLAESYRAVPAPL 111

Query: 26  WHSLIKNL 3
           WH L+K+L
Sbjct: 112 WHGLLKSL 119