BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004536
         (3968 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme...  1916   0.0  
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme...  1832   0.0  
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]  1687   0.0  
emb|CDP05596.1| unnamed protein product [Coffea canephora]           1628   0.0  
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]  1596   0.0  
ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polyme...  1580   0.0  
ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polyme...  1578   0.0  
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]      1576   0.0  
emb|CDP05599.1| unnamed protein product [Coffea canephora]           1574   0.0  
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...  1571   0.0  
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...  1569   0.0  
ref|XP_015076567.1| PREDICTED: probable RNA-dependent RNA polyme...  1561   0.0  
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...  1555   0.0  
ref|XP_015895367.1| PREDICTED: RNA-dependent RNA polymerase 1 [Z...  1554   0.0  
ref|XP_015160223.1| PREDICTED: probable RNA-dependent RNA polyme...  1553   0.0  
ref|XP_006366109.1| PREDICTED: probable RNA-dependent RNA polyme...  1549   0.0  
ref|XP_015160221.1| PREDICTED: probable RNA-dependent RNA polyme...  1539   0.0  
ref|XP_015160224.1| PREDICTED: probable RNA-dependent RNA polyme...  1535   0.0  
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme...  1521   0.0  
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1521   0.0  

>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
            gi|747058682|ref|XP_011075688.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Sesamum indicum]
            gi|747058684|ref|XP_011075689.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Sesamum indicum]
          Length = 1115

 Score = 1916 bits (4964), Expect = 0.0
 Identities = 924/1115 (82%), Positives = 1013/1115 (90%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ A+ VK FLEQ TGQGT++ALEVKPSK+GPR YA+VQF +   AE+
Sbjct: 1    MGKTIQVYGFPYLIAADVVKNFLEQQTGQGTIVALEVKPSKKGPRAYAKVQFTHSRYAEM 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I  LAS   RLY+G+SYLR W+S  DI+ NPRT+VHEMEQVTLNFGCQTSREKFSVLWK 
Sbjct: 61   IQNLAST--RLYYGTSYLRVWESDSDIVHNPRTYVHEMEQVTLNFGCQTSREKFSVLWKV 118

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
             SVSVKFGTGMKKMHF+LCHNSVEY+LQLSYENIWQIVLY+PHGQTAKLLLIQLFGAPRI
Sbjct: 119  ASVSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQIVLYHPHGQTAKLLLIQLFGAPRI 178

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YKK+++S++SYF ET DDQWIRTTDFTPSCIGQ+SGLCL+LPYGMRLPNFQD FV+Y +S
Sbjct: 179  YKKVSESIYSYFSETQDDQWIRTTDFTPSCIGQASGLCLELPYGMRLPNFQDHFVYYSKS 238

Query: 1047 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 1226
            ++PF LE G PF+ NL LVPI+HPPRG ELPYRILFKVC LVQTGCLPGPKLD  FF+LV
Sbjct: 239  ENPFHLERGAPFSHNLDLVPILHPPRGFELPYRILFKVCSLVQTGCLPGPKLDARFFQLV 298

Query: 1227 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1406
            +P+R + +Y+EHALEKLYY+KECCYDP  WL EQYEKYRT +EQP SP ISL DGLVYVH
Sbjct: 299  NPQRINTKYVEHALEKLYYLKECCYDPTTWLMEQYEKYRTAKEQPTSPVISLGDGLVYVH 358

Query: 1407 RVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDE 1586
            RVQ+TPT+VYFSGPEVNVSNRVLRHY D++DNFLRVSFVDEEWDKMYSTDLSP+VA+ DE
Sbjct: 359  RVQVTPTKVYFSGPEVNVSNRVLRHYSDYIDNFLRVSFVDEEWDKMYSTDLSPRVASADE 418

Query: 1587 NKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGD 1766
            N +TKLYERIL TL+EGI IGNK F+FLAFSSSQLRDNSLWMFAPTN L+A  IR+WMGD
Sbjct: 419  NGKTKLYERILKTLREGIRIGNKNFEFLAFSSSQLRDNSLWMFAPTNNLNAHYIRQWMGD 478

Query: 1767 FRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADF 1946
            FR IRNVAKYAARLGQSF SSTETLSVG+ E+E+I DIEAVR GTKY+FSDGIGKISA+F
Sbjct: 479  FRSIRNVAKYAARLGQSFGSSTETLSVGQHEIERIPDIEAVRGGTKYIFSDGIGKISAEF 538

Query: 1947 ARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSW 2126
            ARRVA++CG K++TPSAFQIRYGGYKGVVAVDP SSVKLSLR SMLKYQSENTKLDVL+W
Sbjct: 539  ARRVAVRCGVKNSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRSSMLKYQSENTKLDVLAW 598

Query: 2127 SKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENS 2306
            SKYQPCFLNRQIITLLSTLGVKD+ F+ KQREAVAQLDDILVDPLRAQEALDLM+PGEN+
Sbjct: 599  SKYQPCFLNRQIITLLSTLGVKDHAFERKQREAVAQLDDILVDPLRAQEALDLMAPGENT 658

Query: 2307 NILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILGY 2486
            NILKEMLKCGYKPDGEPFLSMMLQTFR+SKLLDLR+KARIFVPQ RQMMGCLDETG L Y
Sbjct: 659  NILKEMLKCGYKPDGEPFLSMMLQTFRASKLLDLRLKARIFVPQGRQMMGCLDETGTLEY 718

Query: 2487 GQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAIDVR 2666
            G+VFVQFSGA R  F EES M +++  ++ NY+V+G VVVAKNPCLHPGDVRVLKA+DV 
Sbjct: 719  GEVFVQFSGALRRQFNEESIM-FNDYMSEYNYIVKGKVVVAKNPCLHPGDVRVLKAVDVE 777

Query: 2667 ALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTSRL 2846
            ALHHMVDCVVFP +GMRPHPNECSGSDLDGDIYFVCW+ DLIPPRQVSPMDY PAPT+ L
Sbjct: 778  ALHHMVDCVVFPKKGMRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVSPMDYDPAPTTGL 837

Query: 2847 DHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPK 3026
            DHDVTIEEVEEYFTNYIVNDSLGII+NAHTVFADKE +MALSE CLELARLFSIAVDFPK
Sbjct: 838  DHDVTIEEVEEYFTNYIVNDSLGIISNAHTVFADKEESMALSESCLELARLFSIAVDFPK 897

Query: 3027 TGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVAR 3206
            TGVPAEIP HLRVKEYPDFMDKPDK +YES R+IGKL+REVKDIAPHTTS +SFTKEVAR
Sbjct: 898  TGVPAEIPSHLRVKEYPDFMDKPDKTAYESKRVIGKLYREVKDIAPHTTSSKSFTKEVAR 957

Query: 3207 RSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRR 3386
            RSYDPDMEVDGF DY+DEAF+YKTEYD KLGNLMEYYGIKTEAEILSGGIMK SKTFDRR
Sbjct: 958  RSYDPDMEVDGFKDYIDEAFDYKTEYDYKLGNLMEYYGIKTEAEILSGGIMKTSKTFDRR 1017

Query: 3387 KDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYI 3566
            KD EAI  AVRSLRNE RSWFKKG+ESDDPYAKASAWYHVTYHPDFWGSYN GLKRDHYI
Sbjct: 1018 KDAEAIGVAVRSLRNEARSWFKKGSESDDPYAKASAWYHVTYHPDFWGSYNEGLKRDHYI 1077

Query: 3567 SFPWCVYDKLIKIKKDNSRRASDMASLEREFSRRL 3671
            SFPWCVYDKLIKIK+DNSRRA  ++SLE +   RL
Sbjct: 1078 SFPWCVYDKLIKIKEDNSRRAPGISSLEWQLGNRL 1112


>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
            guttata] gi|848895047|ref|XP_012847563.1| PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Erythranthe
            guttata] gi|604316686|gb|EYU28878.1| hypothetical protein
            MIMGU_mgv1a000505mg [Erythranthe guttata]
          Length = 1110

 Score = 1832 bits (4745), Expect = 0.0
 Identities = 888/1118 (79%), Positives = 998/1118 (89%), Gaps = 1/1118 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MG+TI V GFP LV AE VK+FLE  TG+GTVIALEVK +K G R YARVQF NI CAE 
Sbjct: 1    MGRTIQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGRRAYARVQFTNIRCAET 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LA    RLY+G+SYL+A++S IDI+QNPRTF HEME VTLNFGCQ S  KFSVLWK 
Sbjct: 61   IIDLAKN--RLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKG 118

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            ESV+VKFGTGMKKMHF L HNSVEY++QLSYENIWQIVLYN +GQ++KLL+IQLFGAPRI
Sbjct: 119  ESVTVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRI 178

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YKKL+ SV+SYF  T DDQW+RTTDFT S IGQSS LCLQLPYGMRLPNF+D+F++YKES
Sbjct: 179  YKKLSGSVYSYFMVTQDDQWVRTTDFTQSLIGQSSSLCLQLPYGMRLPNFRDNFLYYKES 238

Query: 1047 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 1226
            + PFRLETGVPF+ N  LVPIV PP  ++LPY +LFKVC LVQTGCLPGPKLD +FF LV
Sbjct: 239  ETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSFFDLV 298

Query: 1227 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1406
            +P + DIRYIEHALEKLYY+KECCY+P AWL EQYE+YRT +E P SPAI LDDGLVYVH
Sbjct: 299  NPAKHDIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDDGLVYVH 358

Query: 1407 RVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDE 1586
            RVQ+TPTRVYFSGPEVNVSNRVLRHYRD++DNFLRVSFVDEEWDKMYSTDLSP+VAAGDE
Sbjct: 359  RVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSPRVAAGDE 418

Query: 1587 NKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGD 1766
            NKRTKLYER++S L++G+ IG++KFDFLAFSSSQLRDNSLWMFAPT+GL+AD IR WMGD
Sbjct: 419  NKRTKLYERVISILRDGVRIGDRKFDFLAFSSSQLRDNSLWMFAPTDGLNADGIREWMGD 478

Query: 1767 FRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADF 1946
            F  IRNVAKYAARLGQSF SSTETLSV +RE+E+I D   V+NGT+Y FSDGIGKIS DF
Sbjct: 479  FSSIRNVAKYAARLGQSFGSSTETLSVSKREIEEIQD---VKNGTEYTFSDGIGKISEDF 535

Query: 1947 ARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSW 2126
            AR+VA KCG +S+TPSAFQIRYGGYKGVVAVDP S  KLSLRPSMLKYQS+NTKLDVL+W
Sbjct: 536  ARQVAAKCGVRSSTPSAFQIRYGGYKGVVAVDPSSKKKLSLRPSMLKYQSDNTKLDVLAW 595

Query: 2127 SKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENS 2306
            SKYQPCFLNRQIITLLSTLGVKD+VF+ +QREAVAQLDD+L+DP+RAQEALDLMSPGEN+
Sbjct: 596  SKYQPCFLNRQIITLLSTLGVKDHVFEKRQREAVAQLDDVLIDPMRAQEALDLMSPGENT 655

Query: 2307 NILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILGY 2486
            +ILKEMLKCGY+PDGEPFLSMMLQTFR+SKLLDLRVKAR+F+P+ARQMMGCLDETGIL Y
Sbjct: 656  HILKEMLKCGYEPDGEPFLSMMLQTFRASKLLDLRVKARVFIPKARQMMGCLDETGILKY 715

Query: 2487 GQVFVQFSGAGRGGFYEESNMNYDNVSTDCNY-VVEGNVVVAKNPCLHPGDVRVLKAIDV 2663
            GQVFV++SGA + G +++S   YDN + +  +  V G VVVAKNPCLHPGDVRVL A+DV
Sbjct: 716  GQVFVRYSGAVKRGLFDDS---YDNSTANERFDPVRGKVVVAKNPCLHPGDVRVLTAVDV 772

Query: 2664 RALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTSR 2843
              L HMVDCVVFP  G RPHPNECSGSDLDGDIYFVCW+SDLIP +QV PMDY+PAPT+R
Sbjct: 773  PELRHMVDCVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTR 832

Query: 2844 LDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFP 3023
            LDHDVTIEEVE+YFTNYIVNDSLGIIANAHTVFADKE  MALSEPCLELARLFSIAVDF 
Sbjct: 833  LDHDVTIEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFN 892

Query: 3024 KTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVA 3203
            KTG+PAEIPPHLRVKEYPDFM+KPDK +Y S+R+IGKLFREVKDIAP T+S RSFTKEVA
Sbjct: 893  KTGIPAEIPPHLRVKEYPDFMEKPDKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVA 952

Query: 3204 RRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDR 3383
            RRSYDPDMEVDGF D++DEAF +KTEYD KLGNLMEYYG+KTEAE+LSGGIMKMSKTFDR
Sbjct: 953  RRSYDPDMEVDGFEDHIDEAFLHKTEYDYKLGNLMEYYGVKTEAEVLSGGIMKMSKTFDR 1012

Query: 3384 RKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHY 3563
            RKD EAI AAVRSLRNE RSWFKKG E+DD YAKASAWY+VTYHPD++G YN G+KRDHY
Sbjct: 1013 RKDAEAIGAAVRSLRNEARSWFKKGTEADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHY 1072

Query: 3564 ISFPWCVYDKLIKIKKDNSRRASDMASLEREFSRRLNL 3677
            +SFPWCVYDKL+KIKKDNSRRAS MASL R+F+ R+ +
Sbjct: 1073 LSFPWCVYDKLVKIKKDNSRRASQMASLRRQFNDRVRI 1110


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score = 1687 bits (4369), Expect = 0.0
 Identities = 817/1107 (73%), Positives = 934/1107 (84%), Gaps = 3/1107 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            M KT+HVSGFP L+ AE V++FLE  T +G + ALEVKP KRG R YA+VQF +   A+ 
Sbjct: 1    MRKTLHVSGFPKLIAAEEVRKFLEGHTCEGAIEALEVKPGKRGSRAYAKVQFTSKEDADK 60

Query: 507  IMKLASASARLYFGSS--YLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLW 680
            I+ LA+     Y G+S  YL+A++   + + N R+F+HE++ +TLNFGCQ S+++FSVLW
Sbjct: 61   IIHLANIGLYYYLGNSRSYLKAFEQDTNFV-NHRSFMHELDGLTLNFGCQVSKDRFSVLW 119

Query: 681  KAESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAP 860
            +A  VSVKFG+ + KMH  +C + VEYRLQLSYENIWQIVLYN   QT +LLLIQLFGAP
Sbjct: 120  RAADVSVKFGSSLNKMHLFVCDDLVEYRLQLSYENIWQIVLYNSSVQTERLLLIQLFGAP 179

Query: 861  RIYKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYK 1040
            RIYKKL  SV+S++RETPDDQW+RTTDFTPSCIGQSSGLCLQLP  ++LP+F+++F+ Y 
Sbjct: 180  RIYKKLEYSVYSFYRETPDDQWVRTTDFTPSCIGQSSGLCLQLPRHVKLPDFKNNFMHYT 239

Query: 1041 ESQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
             S++PF+L  G PF  NL LVPIV PPRGLELPY++LFKVC LVQTGCLPG KLDT FF+
Sbjct: 240  VSEEPFQLVNGAPFCGNLPLVPIVQPPRGLELPYKLLFKVCSLVQTGCLPGMKLDTEFFQ 299

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
             ++P+R+ IRYIEHAL+KLYYIKECCYDPVAWL EQY KY+TF E P  P ISLDDGLVY
Sbjct: 300  CLNPRRYAIRYIEHALDKLYYIKECCYDPVAWLREQYRKYQTFEELPKPPTISLDDGLVY 359

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            +HRVQ+TPTRVYF+GPEVN+SNRVLR +  H+DNFLRVSF+DEEWDKMYSTDLSPKVA G
Sbjct: 360  IHRVQVTPTRVYFAGPEVNMSNRVLRQFSAHIDNFLRVSFIDEEWDKMYSTDLSPKVATG 419

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
              N RTKLYER+LSTL+ GI IG K+F FLAFSSSQLR+NSLWMFAP +GL AD IRRWM
Sbjct: 420  VGNGRTKLYERVLSTLRNGITIGEKRFQFLAFSSSQLRENSLWMFAPVDGLTADDIRRWM 479

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  IRNVAKYAARLGQSFSSSTETL V + EVE+I D+E VR+GT Y+FSDGIGKIS+
Sbjct: 480  GDFSSIRNVAKYAARLGQSFSSSTETLKVAQYEVERIPDVEVVRDGTTYIFSDGIGKISS 539

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +   PSAFQIRYGGYKGVVAVDP SS+KLSLR SMLKYQS+NTKLDVL
Sbjct: 540  DFARRVATKCGIRDGVPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMLKYQSDNTKLDVL 599

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
            SWSKYQPCF+NRQIITLLSTLGV+D+VF+ KQREAVAQLDDILVDPL+AQ+ALDLMSPGE
Sbjct: 600  SWSKYQPCFMNRQIITLLSTLGVRDHVFEKKQREAVAQLDDILVDPLKAQDALDLMSPGE 659

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILKEMLKCGYKPD EPFLSMMLQTFR +KLLDLRVKARIF+PQARQMMGC+DETG L
Sbjct: 660  NTNILKEMLKCGYKPDEEPFLSMMLQTFRLAKLLDLRVKARIFIPQARQMMGCMDETGTL 719

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQFSG G  G YE +            Y V G V VAKNPCLHPGDVRVL+A+D
Sbjct: 720  EYGQVFVQFSGTGSSGLYEGT-----------KYTVTGKVAVAKNPCLHPGDVRVLRAVD 768

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V  L HMVDCVVFP +G RPHPNECSGSDLDGD YFVCW+ +LIPP Q SPM Y+PAP +
Sbjct: 769  VPELQHMVDCVVFPRKGRRPHPNECSGSDLDGDRYFVCWDPELIPPNQESPMTYNPAPNT 828

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
             LDH+VTIEEVEEYFTNYIVNDSLGIIANAHT FADKE + ALS PCLELA+LFS+AVDF
Sbjct: 829  LLDHNVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKERDGALSSPCLELAQLFSVAVDF 888

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTG+PAEIPPHLRVKEYPDFMDKPDK +Y S RIIGKL+R+VKDIAPH  S+ SFT EV
Sbjct: 889  PKTGIPAEIPPHLRVKEYPDFMDKPDKTTYTSERIIGKLYRQVKDIAPHAASLGSFTMEV 948

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            A RSYD DMEV+GF +Y+DEAFE+KTEYD KLGN+M+YYGIKTEAEILSG IMK SKTFD
Sbjct: 949  AMRSYDTDMEVEGFREYIDEAFEFKTEYDYKLGNMMDYYGIKTEAEILSGAIMKTSKTFD 1008

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLK-RD 3557
            RRKD +AI A+VR+LRNE RSWFKKG+ES D YA ASAWYHVTY   FWG YNVG+K R 
Sbjct: 1009 RRKDADAIGASVRALRNEARSWFKKGSESGDAYAMASAWYHVTYDSSFWGCYNVGMKRRG 1068

Query: 3558 HYISFPWCVYDKLIKIKKDNSRRASDM 3638
            HYISFPWCVYDKL++IK+  S R S +
Sbjct: 1069 HYISFPWCVYDKLVQIKRAKSARISSL 1095


>emb|CDP05596.1| unnamed protein product [Coffea canephora]
          Length = 1112

 Score = 1628 bits (4215), Expect = 0.0
 Identities = 800/1122 (71%), Positives = 930/1122 (82%), Gaps = 5/1122 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP +VPAE V +FLE  TGQGTV ALE+K SK G R YA+VQF N   AE 
Sbjct: 1    MGKTIQVFGFPSVVPAETVTKFLECFTGQGTVYALEIKQSKGGNRAYAKVQFTNDRSAEY 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            IM LA    RL +GSSYLRAW+  +D++   R+F H MEQ+ L+FGCQ S+ +FSVL   
Sbjct: 61   IMTLAKK--RLNYGSSYLRAWEMDVDLVPRARSFEHNMEQIVLHFGCQVSKNRFSVLRNV 118

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
             +VSV+FG GM+KM+F+L   S +Y+L+LSYENIWQIVL+       K LLIQLFGAPR+
Sbjct: 119  PNVSVRFGIGMRKMYFILRFRSCDYKLELSYENIWQIVLHR-RSLAPKFLLIQLFGAPRV 177

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            +KKL +S  SYF+ETPDDQW+RTTDFT SCIGQSSG+CL+LP G++LPN  D F ++KES
Sbjct: 178  FKKLEESTFSYFKETPDDQWVRTTDFTSSCIGQSSGICLELPRGIQLPNLGDYFAWFKES 237

Query: 1047 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 1226
               F LETG P++ NL L PI+ PP+GL LPY ILFKVC LVQTGCLPGP LD NFFRLV
Sbjct: 238  DSQFFLETGSPYSYNLVLAPILQPPQGLYLPYGILFKVCCLVQTGCLPGPSLDANFFRLV 297

Query: 1227 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1406
            DP+R  IRYIEHALE LY +KECCY+PV WL EQY+KY   R+ P SP ++LDDGLVYV 
Sbjct: 298  DPQRIKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTLTLDDGLVYVR 357

Query: 1407 RVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDE 1586
            RVQ+TP +VYF GPEVNVSNRVLR++ + +DNFLRVSF+DEEW+KM+STDLSP++AA +E
Sbjct: 358  RVQVTPCKVYFCGPEVNVSNRVLRNFSEDLDNFLRVSFIDEEWNKMFSTDLSPRIAA-NE 416

Query: 1587 NKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGD 1766
            N RT++YERILSTLK G++IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WMGD
Sbjct: 417  NGRTEIYERILSTLKNGMVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAADIRTWMGD 476

Query: 1767 FRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNG----TKYVFSDGIGKI 1934
            F  IRNVAKYAARLGQSFSSSTETL+VG  E+E I DIE VR G    +KYVFSDGIGK+
Sbjct: 477  FSRIRNVAKYAARLGQSFSSSTETLNVGRHEIEMISDIE-VRGGYFGTSKYVFSDGIGKM 535

Query: 1935 SADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLD 2114
            SA FAR+VA KCG  S TPSAFQIRYGG+KGVVAVDP SS KLSLR SM+KY+S+NTKLD
Sbjct: 536  SAQFARQVATKCGL-SFTPSAFQIRYGGFKGVVAVDPTSSKKLSLRQSMMKYESDNTKLD 594

Query: 2115 VLSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSP 2294
            VL+WSKYQPCFLNRQ+ITLLSTLGVKD VF+ KQREAVAQLD IL DPLRA+EAL+LM+P
Sbjct: 595  VLAWSKYQPCFLNRQLITLLSTLGVKDVVFEKKQREAVAQLDTILTDPLRAREALELMAP 654

Query: 2295 GENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETG 2474
            GEN+N+LKEMLKCGYKPD EPFLSMMLQTFR+SKLLDLR K RIF+P  R M+GCLDET 
Sbjct: 655  GENTNVLKEMLKCGYKPDSEPFLSMMLQTFRASKLLDLRTKTRIFIPDGRSMIGCLDETR 714

Query: 2475 ILGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKA 2654
             L YGQVFVQFS AG   FY++S   Y++ +     +++G VVVAKNPCLHPGD+R+LKA
Sbjct: 715  TLEYGQVFVQFSSAGCRQFYDDSISYYEHKT-----ILKGTVVVAKNPCLHPGDIRILKA 769

Query: 2655 IDVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAP 2834
            +D+  LHHMVDCVVFP +G RPH NECSGSDLDGDIYFVCW+ DLIPPRQ  PMDY+PAP
Sbjct: 770  VDLPTLHHMVDCVVFPQKGKRPHTNECSGSDLDGDIYFVCWDPDLIPPRQDEPMDYTPAP 829

Query: 2835 TSRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAV 3014
            T +L+H+VTIEEVEEYFTNYIVNDSLGIIANAHTVFAD+E   A S+PCLELARLFSIAV
Sbjct: 830  TMQLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRELLKARSKPCLELARLFSIAV 889

Query: 3015 DFPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTK 3194
            DFPKTGVPAEI  HLRVKEYPDFM+K DK +Y+S  +IGKLFREVK+IAPHT+SIRSFT+
Sbjct: 890  DFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQHVIGKLFREVKEIAPHTSSIRSFTR 949

Query: 3195 EVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKT 3374
            EVAR+SYD DMEVDGF DYVDEAF+YK+EYD KLGNLM+YYGIKTEAEILSGGIMKMS++
Sbjct: 950  EVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSGGIMKMSRS 1009

Query: 3375 FDRRKDVEAISAAVRSLRNEVRSWF-KKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLK 3551
            FDRRKD EA+  AVRSLR E R+WF + G  SDD +AKASAWY+VTYHP +WG YN GL 
Sbjct: 1010 FDRRKDAEAVGMAVRSLRKEARTWFNRNGGHSDDAFAKASAWYYVTYHPRYWGCYNEGLN 1069

Query: 3552 RDHYISFPWCVYDKLIKIKKDNSRRASDMASLEREFSRRLNL 3677
            R HYISFPWC+YD+LI+IKK  +RRA   +SLE +F+ RL L
Sbjct: 1070 RAHYISFPWCIYDRLIQIKKARTRRAQQPSSLEVQFNHRLRL 1111


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score = 1596 bits (4133), Expect = 0.0
 Identities = 774/1052 (73%), Positives = 897/1052 (85%), Gaps = 7/1052 (0%)
 Frame = +3

Query: 534  RLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGT 713
            RL   + YL+ W+   DI+ NPRT+ + +E VTLN GCQ S ++FSVLWKA  VS+KFGT
Sbjct: 7    RLRCNTYYLKFWEQKTDIVPNPRTYDNVVEGVTLNLGCQISEDEFSVLWKASDVSIKFGT 66

Query: 714  GMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVH 893
            G+K MH  LCH SVEYRLQL Y+NIWQIVLYN  GQ A++LLIQL+GAPRI+KKL DSV+
Sbjct: 67   GLKNMHLFLCHESVEYRLQLYYDNIWQIVLYNSGGQAAQVLLIQLYGAPRIHKKLPDSVY 126

Query: 894  SYFRETPDDQWIRTTDFTPS-CIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLET 1070
            SYF++TPDDQW+RTTDFTPS CIGQSSG+CLQ P G++LP F+  FV+YKES+ PF LE 
Sbjct: 127  SYFQQTPDDQWVRTTDFTPSSCIGQSSGMCLQFPSGIKLPEFERHFVYYKESKKPFFLEN 186

Query: 1071 GVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIR 1250
            GVPF  NL LVPI+ P RGLELPYR+LFKVC LVQTGCLPGPKLD NF+RL++PK FDI 
Sbjct: 187  GVPFCENLDLVPIMQP-RGLELPYRLLFKVCCLVQTGCLPGPKLDDNFYRLLNPKSFDIT 245

Query: 1251 YIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTR 1430
            Y+E  LEKLYY+KECCYDP +WL EQ++ Y TF++ P  PA++  D LV++HRVQ+TPT+
Sbjct: 246  YLEQLLEKLYYLKECCYDPHSWLIEQHQNYCTFKK-PKPPAVN--DDLVHIHRVQVTPTK 302

Query: 1431 VYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYE 1610
            VYF GPE NVSNRVLR++ DH+DNFLRVSFV+E+W KMY++DLSP+ A GDEN RTKLYE
Sbjct: 303  VYFHGPEANVSNRVLRNFHDHIDNFLRVSFVEEDWSKMYASDLSPRGAGGDENTRTKLYE 362

Query: 1611 RILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVA 1790
            R+LSTL+ GI IG+KKF+FLAFSSSQLR+NSLWMFAP +GL+AD IRRWMGDF  IRNVA
Sbjct: 363  RVLSTLRNGITIGSKKFEFLAFSSSQLRENSLWMFAPVDGLNADDIRRWMGDFSSIRNVA 422

Query: 1791 KYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKC 1970
            KYAARLGQSF SSTETLSV + EVEKI D+E V NGT Y+FSDGIGKIS DFARRVAIKC
Sbjct: 423  KYAARLGQSFGSSTETLSVAQNEVEKIPDVEVVTNGTTYIFSDGIGKISVDFARRVAIKC 482

Query: 1971 GFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFL 2150
            G KS  PSAFQIRYGGYKGVVA+DP SSVK+SLRPSMLKYQS++TKL+VL WSKYQPCFL
Sbjct: 483  GLKSNIPSAFQIRYGGYKGVVAIDPTSSVKMSLRPSMLKYQSDDTKLNVLGWSKYQPCFL 542

Query: 2151 NRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLK 2330
            NRQIITLLSTLGV D+VF+ KQREAVAQL+DILVDPL+A EALDLMS GEN+ ILKEMLK
Sbjct: 543  NRQIITLLSTLGVMDHVFEKKQREAVAQLNDILVDPLKALEALDLMSLGENTYILKEMLK 602

Query: 2331 CGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILGYGQVFVQFS 2510
            CGYKPD EPFL+MMLQTFRSS+LLDLR K+RIF+PQAR MMGCLDETG L YGQVFVQFS
Sbjct: 603  CGYKPDEEPFLAMMLQTFRSSQLLDLRTKSRIFIPQARNMMGCLDETGTLEYGQVFVQFS 662

Query: 2511 GAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAIDVRALHHMVDC 2690
            GAG+  FYEES    +  STD NY+V+G V VAKNPCLHPGD+RVL+AIDV ALHHMV+C
Sbjct: 663  GAGQRRFYEESIKFDEYTSTDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDVPALHHMVNC 722

Query: 2691 VVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTSRLDHDVTIEE 2870
            +VFP +G RPHPNECSGSDLDGDIY VCW+ DLIPP+Q  PMDY+PAP +RLDH+VTI+E
Sbjct: 723  IVFPQKGTRPHPNECSGSDLDGDIYIVCWDPDLIPPKQFDPMDYNPAPATRLDHEVTIQE 782

Query: 2871 VEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIP 3050
            V+EYFTNYI+N+SLGIIANAHTVFADKE +MALS PCLELA+L S+AVDFPKTGVPA+IP
Sbjct: 783  VQEYFTNYILNESLGIIANAHTVFADKEPSMALSSPCLELAQLHSVAVDFPKTGVPAQIP 842

Query: 3051 PHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDME 3230
            P LRVKEYPDFM+K DK ++EST +IGKLFREVK +   TTS+R FTKEVAR SYD DME
Sbjct: 843  PKLRVKEYPDFMEKLDKPTFESTGVIGKLFREVKHVTTDTTSLR-FTKEVARSSYDADME 901

Query: 3231 VDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISA 3410
            VDGF DY+ EAFE KT YD KLGNLM+YYGIKTE EILS  IMK+SKTFDRRK  EAI A
Sbjct: 902  VDGFRDYIKEAFECKTNYDRKLGNLMDYYGIKTEGEILSRAIMKVSKTFDRRKSAEAIGA 961

Query: 3411 AVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGL-KRDHYISFPWCVY 3587
            AV+SLRNE RSWFKKG++S +PYA ASAWYHVTYH DFWG YN  + KR+HYISFPWCVY
Sbjct: 962  AVKSLRNEARSWFKKGSKSGNPYAMASAWYHVTYHHDFWGHYNKDMKKRNHYISFPWCVY 1021

Query: 3588 DKLIKIKKDNSRR-----ASDMASLEREFSRR 3668
            DKL++IK +N+R+     +SD   + +E +R+
Sbjct: 1022 DKLVQIKNENARKYHPTSSSDQVGIRKENARK 1053


>ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
            tomentosiformis] gi|697138603|ref|XP_009623378.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1
            [Nicotiana tomentosiformis]
            gi|697138605|ref|XP_009623379.1| PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nicotiana
            tomentosiformis] gi|697138607|ref|XP_009623380.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1
            [Nicotiana tomentosiformis]
          Length = 1116

 Score = 1580 bits (4091), Expect = 0.0
 Identities = 778/1119 (69%), Positives = 920/1119 (82%), Gaps = 4/1119 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK+FLE  TG GTV ALEVK SK G R +A+VQF N   AE 
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS    LY+G SYL+AW+   DI+Q PRT+V  M+ VTLNFGCQ S +KF+VL  +
Sbjct: 61   IIDLASKG--LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            + VS+KFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117  KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+   G++LPNF +SF +YKES
Sbjct: 177  YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKES 236

Query: 1047 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
             + F L+TG  F+ +  LALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF+
Sbjct: 237  MNQFILQTGFTFSFSQKLALVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFFQ 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R +I  IEHALEKLYY+KECCYDPV WL EQY++Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + ++NFLRVSFVDEEW+K++STDL P+ + G
Sbjct: 357  VRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL+ G IIG+K+F+FLAFSSSQLRDNS+WMFA   GL A+ IR WM
Sbjct: 417  N-GTRTDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDFR IRNVAKYAARLGQSF SS ETLSVG  EVE I D+    +GT Y+FSDGIGKISA
Sbjct: 476  GDFRQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISA 535

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFA RVAIKCG +  TPS+FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDVL
Sbjct: 536  DFAHRVAIKCGLQY-TPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVL 594

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGV D V + KQ EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 595  GWSKYQPCYLNRQLVTLLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSPGE 654

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILKEML CGY PD EPFLSMMLQTFR+SKLLDLR + RIF+P  R MMGCLDE+  L
Sbjct: 655  NTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTL 714

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQFS AGR  FYEES+   D+ S +C+++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 715  EYGQVFVQFSRAGRRQFYEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVD 774

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ DLIPPRQV PMDY+PAPT+
Sbjct: 775  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPTT 834

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVDF
Sbjct: 835  QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDF 894

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTGVPAEIP  LR KEYPDFM+KPDK +Y S ++IGKLF++VK+  P  +SI +FT++V
Sbjct: 895  PKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDV 954

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            AR+SYD DM VDGF DY+DEAF YK+EYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFD
Sbjct: 955  ARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1014

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDH 3560
            RRKD EAI  AVR LR E R+WFK+ ++ DD  AKASAWYHVTYH  +WG YN GLKRDH
Sbjct: 1015 RRKDAEAIGVAVRCLRKEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDH 1074

Query: 3561 YISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRL 3671
            +ISFPWCVYD+LI+IKK  +R+     ++SL  + SR+L
Sbjct: 1075 FISFPWCVYDQLIQIKKAKARKRPVPHLSSLGSQLSRKL 1113


>ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
            sylvestris] gi|698458664|ref|XP_009781108.1| PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Nicotiana
            sylvestris] gi|698458668|ref|XP_009781109.1| PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Nicotiana
            sylvestris]
          Length = 1116

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 780/1121 (69%), Positives = 920/1121 (82%), Gaps = 4/1121 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK+FLE  TG GTV A+EVK SK G R +A VQF N   AE 
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYAVEVKQSKGGRRAFAIVQFANNKSAEF 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLY+G+SYL+AW+   DI+Q PRT+V  M+ VTLNFGC  S +KF+VL  +
Sbjct: 61   IIDLASK--RLYYGTSYLKAWEMKTDIVQ-PRTYVQHMDGVTLNFGCLISDKKFAVLG-S 116

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            + VSVKFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117  KGVSVKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L  S +S+F+ETPDDQW+RTTDFT S IG SS LCL+   G RLPNF +SF +YKES
Sbjct: 177  YKRLEGSCYSFFKETPDDQWVRTTDFTTSWIGLSSSLCLEFRNGGRLPNFSESFFYYKES 236

Query: 1047 QDPFRLETGVPFA--ANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
                 L+TG  F+   NLALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF+
Sbjct: 237  VSQVILQTGFTFSFSQNLALVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFFQ 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R +I  IEHALEKLYY+KECCYDPV WL EQY++Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLNRRQLPKSPSITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K++STDL  + ++G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLTRASSG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL+ G IIG+K+F+FLAFSSSQLRDNS+WMFA   GL A+ IR WM
Sbjct: 417  N-GIRTDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF+ IRNVAKYAARLGQSF SS ETLSVG  E E I D+    +GT Y+FSDGIGKISA
Sbjct: 476  GDFQQIRNVAKYAARLGQSFGSSRETLSVGRHEAEVIPDVVCSLHGTNYIFSDGIGKISA 535

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVAIKCG +  TPS+FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDVL
Sbjct: 536  DFARRVAIKCGLQY-TPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVL 594

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGVKD VF+ KQ EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 595  GWSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVEQLDAILHDSLKAQEALELMSPGE 654

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILKEML CGY PD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 655  NTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTL 714

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+G GR  FYEES+   D+ ST+CN+++EGNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 715  EYGQVFVQFTGTGRRQFYEESHPFNDSGSTNCNFILEGNVVVAKNPCLHPGDIRVLRAVD 774

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ DLIPPRQV PMDY+PAP++
Sbjct: 775  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPST 834

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEV+EYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVDF
Sbjct: 835  QLDHDVTIEEVQEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDF 894

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTGVPAEIP  LR KEYPDFM+KPDK +Y S ++IGKLF++VKD  P  +SI +FT +V
Sbjct: 895  PKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIATFTMDV 954

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            AR+SYD DM V+GF DY+DEAF YK+EYDNKLGNLM+YYG+KTEAEILSGGIMK SKTFD
Sbjct: 955  ARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGVKTEAEILSGGIMKASKTFD 1014

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDH 3560
            RRKD EAI  AVRSLR E R+WFKK ++ DD  AKASAWYHVTYH  +WG YN GLKRDH
Sbjct: 1015 RRKDAEAIGIAVRSLRKEARTWFKKRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDH 1074

Query: 3561 YISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNL 3677
            +ISFPWCVYD+LI+IKK  +R+     ++SL  + SR+L L
Sbjct: 1075 FISFPWCVYDQLIQIKKAKARKKPVLHLSSLGNQLSRKLVL 1115


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 1576 bits (4082), Expect = 0.0
 Identities = 775/1119 (69%), Positives = 918/1119 (82%), Gaps = 4/1119 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK+FLE  TG GTV ALEVK SK G R +A+VQF N   AE 
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS    LY+G SYL+AW+   DI+Q PRT+V  M+ VTLNFGCQ S +KF+VL  +
Sbjct: 61   IIDLASKG--LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            + VS+KFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117  KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+   G++LPNF +SF +YKES
Sbjct: 177  YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKES 236

Query: 1047 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
             + F L+TG  F+ +  LALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF+
Sbjct: 237  MNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQ 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R +I  IEHALEKLYY+KECCYDPV WL EQY++Y   R+ P SP I+LDDGLVY
Sbjct: 297  LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + ++NFLRVSFVDEEW+K++STDL P+ + G
Sbjct: 357  VRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL+ G IIG+K+F+FLAFSSSQLRDNS+WMFA   GL A+ IR WM
Sbjct: 417  N-GTRTDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDFR IRNVAKYAARLGQSF SS ETLSVG  EVE I D+    +GT Y+FSDGIGKISA
Sbjct: 476  GDFRQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKISA 535

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFA RV IKCG +  TPS+FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDVL
Sbjct: 536  DFAHRVTIKCGLQY-TPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVL 594

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGV D V + KQ EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 595  GWSKYQPCYLNRQLVTLLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSPGE 654

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILKEML CGY PD EPFLSMMLQTFR+SKLLDLR + RIF+P  R MMGCLDE+  L
Sbjct: 655  NTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTL 714

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQFSGAGR  F+EES+   D+ S +C+++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 715  EYGQVFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVD 774

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ DLIPPRQV  MDY+PAPT+
Sbjct: 775  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTT 834

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEVEEYFTNYI+NDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVDF
Sbjct: 835  QLDHDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDF 894

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTGVPAEIP  LR KEYPDFM+KPDK +Y S ++IGKLF++VK+  P  +SI +FT++V
Sbjct: 895  PKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDV 954

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            AR+SYD DM VDGF DY+DEAF YK+EYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFD
Sbjct: 955  ARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1014

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDH 3560
            RRKD EAI  AVR LR E R+WFK+ ++ DD  AKASAWYHVTYH  +WG YN GLKRDH
Sbjct: 1015 RRKDAEAIGVAVRCLRKEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDH 1074

Query: 3561 YISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRL 3671
            +ISFPWCVYD+LI+IKK  +R+     ++SL  + SR+L
Sbjct: 1075 FISFPWCVYDQLIQIKKAKARKRPVPHLSSLGSQLSRKL 1113


>emb|CDP05599.1| unnamed protein product [Coffea canephora]
          Length = 1113

 Score = 1574 bits (4076), Expect = 0.0
 Identities = 780/1120 (69%), Positives = 908/1120 (81%), Gaps = 5/1120 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP ++ AE V  FLE+ TGQGTV ALEVK SK GPR YARVQF+N   AE 
Sbjct: 1    MGKTIQVFGFPYVLAAEIVTEFLERFTGQGTVYALEVKQSKGGPRAYARVQFINDRSAEY 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LA     L +GSSYLRAW+   D++  PRT+ H MEQ+ LNFGCQ S  +FSVL   
Sbjct: 61   IIALAEQC--LNYGSSYLRAWEMDSDLVPRPRTYEHHMEQIVLNFGCQVSENRFSVLCNV 118

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
             +VSV+FG GM+KM+F+L   S +Y+L+LS EN+WQIVL+   GQ AK LLIQL GAPR+
Sbjct: 119  PNVSVRFGIGMRKMYFILHFRSCDYKLELSDENLWQIVLHR-RGQAAKFLLIQLLGAPRV 177

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            ++KL +S  SYF+ETPDD+W+RTTDFT SCIGQSSG+CL+LP G++LPN +D F +YKES
Sbjct: 178  FQKLEESTFSYFQETPDDRWLRTTDFTSSCIGQSSGICLKLPRGIKLPNLRDYFPWYKES 237

Query: 1047 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 1226
               F LETG P++ NL L PI+HPPRGL LPY ILFKVC LVQ GCLPGP LD NFFRLV
Sbjct: 238  DSQFTLETGSPYSYNLVLAPILHPPRGLYLPYGILFKVCCLVQNGCLPGPSLDANFFRLV 297

Query: 1227 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1406
            DP+R DIRYIEHALE LY + +CCY+PV WL EQY+KY    + P SP ++L+ GLVYV 
Sbjct: 298  DPQRRDIRYIEHALENLYILNDCCYEPVQWLKEQYDKYDKLLQLPISPTLTLEGGLVYVR 357

Query: 1407 RVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDE 1586
            RVQ+TP +VYF GPEVNVSNRVLRH+ + + NFLRVSF+DEE +KM++TDLSP++AA + 
Sbjct: 358  RVQVTPCKVYFCGPEVNVSNRVLRHFSEDIGNFLRVSFIDEEGNKMFATDLSPRIAA-NV 416

Query: 1587 NKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGD 1766
            N+RTK+YERILSTLK GI+IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WMGD
Sbjct: 417  NQRTKIYERILSTLKNGIVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAADIRTWMGD 476

Query: 1767 FRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNG----TKYVFSDGIGKI 1934
            F  IRNVAKYAARLGQSFSSSTETL+VG  E+E I DIE VR G    +KYVFSDGIGKI
Sbjct: 477  FSRIRNVAKYAARLGQSFSSSTETLNVGTHEIEMIPDIE-VRGGYFGASKYVFSDGIGKI 535

Query: 1935 SADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLD 2114
            SA FAR+VA KCGF ++TPSAFQIRYGG+KGVVAVDP SS KLSLR SM KY+S NTKLD
Sbjct: 536  SAQFARQVARKCGFITSTPSAFQIRYGGFKGVVAVDPTSSKKLSLRQSMKKYESNNTKLD 595

Query: 2115 VLSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSP 2294
            VL+WSKYQPCFLNR IITLLSTLGVKD VF+ KQ EAV++LD IL DPLRA EALDLM+ 
Sbjct: 596  VLAWSKYQPCFLNRHIITLLSTLGVKDIVFEKKQCEAVSRLDTILTDPLRAHEALDLMAS 655

Query: 2295 GENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETG 2474
            GEN N+LKEMLKCGYKP+ EPFLSMMLQTFR+SKLL+LR K RIF+P  R M+GCLDET 
Sbjct: 656  GENMNVLKEMLKCGYKPNSEPFLSMMLQTFRTSKLLELRTKTRIFIPNGRSMIGCLDETR 715

Query: 2475 ILGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKA 2654
             L YGQVFVQ S AG G FY++SN   +      N ++E  VVVAKNPCLHPGDVR+LKA
Sbjct: 716  TLEYGQVFVQLSSAGHGQFYDDSNQYSEQ-----NVILEEKVVVAKNPCLHPGDVRILKA 770

Query: 2655 IDVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAP 2834
            +++ ALHHM+DCVVFP +G RPHPNECSGSDLDGD YFVCW+ DLIPPRQ  PMDY+PAP
Sbjct: 771  VNLPALHHMMDCVVFPQKGKRPHPNECSGSDLDGDTYFVCWDPDLIPPRQDRPMDYTPAP 830

Query: 2835 TSRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAV 3014
            T +LDH VTIEEVEEYFT+YIVN+SLGIIANAHTVFAD+E   A SEPCLELA L SIAV
Sbjct: 831  TMQLDHKVTIEEVEEYFTDYIVNNSLGIIANAHTVFADREPLKARSEPCLELAELHSIAV 890

Query: 3015 DFPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTK 3194
            DFPKTGVPAEIP HLRVKE+PDFM+K DK  Y+S R+IGKLFREVK  AP T+SI+SFTK
Sbjct: 891  DFPKTGVPAEIPSHLRVKEFPDFMEKSDKPMYDSQRVIGKLFREVKGKAPLTSSIKSFTK 950

Query: 3195 EVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKT 3374
            +VAR+SYD DMEVDGF DY+ EAF+YK+EYD KLGNLM+YYGI+TEAEILSGGIMKMS++
Sbjct: 951  QVARKSYDSDMEVDGFEDYIAEAFDYKSEYDYKLGNLMDYYGIETEAEILSGGIMKMSRS 1010

Query: 3375 FDRRKDVEAISAAVRSLRNEVRSWFK-KGNESDDPYAKASAWYHVTYHPDFWGSYNVGLK 3551
            FDRR D EA+  A+ SLR E ++WF   G+   D  AKASAWYHVTYHP +WG YN GL 
Sbjct: 1011 FDRRNDAEAVGRAMTSLRKEAKTWFNTNGDHFGDACAKASAWYHVTYHPKYWGCYNKGLN 1070

Query: 3552 RDHYISFPWCVYDKLIKIKKDNSRRASDMASLEREFSRRL 3671
            R HYISFPWCVYDKLI+IKK + RR+  ++ LE +FS  L
Sbjct: 1071 RAHYISFPWCVYDKLIQIKKASIRRSQQISLLELQFSHGL 1110


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score = 1571 bits (4067), Expect = 0.0
 Identities = 774/1122 (68%), Positives = 919/1122 (81%), Gaps = 5/1122 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK FLE  TG GTV ALEVK SK G R +A+VQF N   AEI
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS    LY+G SYL+AW+    I+Q PRT+V  M+ VTLNFGCQ S +KF+VL  +
Sbjct: 61   IIDLASKG--LYYGPSYLKAWEMKTYIVQ-PRTYVQHMDGVTLNFGCQISDKKFAVLG-S 116

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            + VS+KFG G+KK++F L + S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QL GAPRI
Sbjct: 117  KVVSIKFGIGLKKIYFFLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+   G+RLPNF +SF +YKES
Sbjct: 177  YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGVRLPNFSESFFYYKES 236

Query: 1047 QDPFRLETGVPFAAN---LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFF 1217
             +   L+TG  F+ +   LALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF
Sbjct: 237  ANQVILQTGFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFF 296

Query: 1218 RLVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLV 1397
            +LVDP+R +I  IEHALEKLYY+KECCYDPV WL EQY++Y   R+ P SP+I+LDDGLV
Sbjct: 297  QLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLV 356

Query: 1398 YVHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAA 1577
            YV RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K++STDL P+ + 
Sbjct: 357  YVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRAST 416

Query: 1578 GDENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRW 1757
            G+   RT +Y RILSTL+ G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR W
Sbjct: 417  GN-GVRTDIYLRILSTLRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTW 475

Query: 1758 MGDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKIS 1937
            MG F+ IRNVAKYAARLGQSF SS ETLSVG  EVE I D+    +GT Y+FSDGIGKIS
Sbjct: 476  MGGFQQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKIS 535

Query: 1938 ADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDV 2117
            ADFARRVA+KCG +  TPS FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDV
Sbjct: 536  ADFARRVAVKCGLQY-TPSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDV 594

Query: 2118 LSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPG 2297
            L WSKYQPC+LNRQ++TLLSTLGVKD VF+ KQ EAV QLD IL D L+AQEAL+LMSPG
Sbjct: 595  LGWSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMSPG 654

Query: 2298 ENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGI 2477
            EN+NILKEML CGY PD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  
Sbjct: 655  ENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRT 714

Query: 2478 LGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAI 2657
            L YGQVFVQF+G GR  FYEES+   D+ ST+C++++EGNVVVAKNPCLHPGD+RVL+A+
Sbjct: 715  LEYGQVFVQFTGTGRRQFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAV 774

Query: 2658 DVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPT 2837
            DV ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ DL+PPRQ  PMDY+PAP+
Sbjct: 775  DVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPS 834

Query: 2838 SRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVD 3017
            ++LDHDVTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVD
Sbjct: 835  TQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVD 894

Query: 3018 FPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKE 3197
            FPKTGVPAEIP  LR KEYPDFM+KPDK +Y S ++IGKLF++VKD  P  +SI +FT +
Sbjct: 895  FPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMD 954

Query: 3198 VARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTF 3377
            VAR+SYD DM V+GF DY+DEAF YK+EYDNKLGNLM+YYGIKTEAEILSGGIMK SKTF
Sbjct: 955  VARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1014

Query: 3378 DRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRD 3557
            DRRKD +AI  AVRSLR E R+WFK+ ++ DD  AKASAWYHVTYH  +WG YN GLKRD
Sbjct: 1015 DRRKDADAIGVAVRSLRKEARTWFKRRSDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRD 1074

Query: 3558 HYISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNL 3677
            H+ISFPWC+YD+LI+IKK  +R+     ++SL  + SR+L L
Sbjct: 1075 HFISFPWCIYDQLIQIKKAKARKKPVLHLSSLGNQLSRKLVL 1116


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score = 1569 bits (4063), Expect = 0.0
 Identities = 776/1122 (69%), Positives = 913/1122 (81%), Gaps = 4/1122 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQF +   A+ 
Sbjct: 1    MGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LA+   RLYFGSSYL+AW+   DI+Q  R +V +M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IITLANN--RLYFGSSYLKAWEMKTDIVQL-RAYVDQMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS++FG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+RLPNF++SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVRLPNFEESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IEHALEKLYYIKECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPRRRNVACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
                RT +YERILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WM
Sbjct: 417  S-GVRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKIS 
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISG 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFA RVA KCG +  TPSAFQIRYGGYKGVV VDPDSS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFAHRVASKCGLQY-TPSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ+ITLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  GWSKYQPCYLNRQLITLLSTLGVKDEVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGYKPD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+GAG G F ++ +   ++ ST+ N++++GNVVVAKNPCLHPGD+RVLKA++
Sbjct: 713  EYGQVFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVN 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            VRALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV PM+Y PAP+ 
Sbjct: 773  VRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSI 832

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDF
Sbjct: 833  QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTGVPAEIP  LR KEYPDFMDKPDK SY S R+IGKLFR+VKD AP  +SI +FT++V
Sbjct: 893  PKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDV 952

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            ARRSYD DMEVDGF DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFD
Sbjct: 953  ARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1012

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDH 3560
            RRKD EAIS AVR+LR E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKR H
Sbjct: 1013 RRKDAEAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAH 1072

Query: 3561 YISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNLR 3680
            +ISFPWCVYD+LI+IKKD +R     +++SL  + S RL L+
Sbjct: 1073 FISFPWCVYDQLIQIKKDKARNRPVLNLSSLRAQLSHRLVLK 1114


>ref|XP_015076567.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Solanum
            pennellii]
          Length = 1114

 Score = 1561 bits (4041), Expect = 0.0
 Identities = 773/1122 (68%), Positives = 912/1122 (81%), Gaps = 4/1122 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP L+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQF +   A+ 
Sbjct: 1    MGKTIQVYGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LA+   RLYFGSSYL+A +   DI+Q  R +V +M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IITLANN--RLYFGSSYLKAREMKTDIVQL-RAYVDQMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS++FG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+RLPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVRLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++ F L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFR
Sbjct: 237  ENNFTLQTGFTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IEHALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPRRRNVACIEHALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WM
Sbjct: 417  N-GIRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKIS 
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISG 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFA RVA KCG +  TPSAFQIRYGGYKGVV VDPDSS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFAHRVASKCGLQY-TPSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  GWSKYQPCYLNRQLVTLLSTLGVKDEVLELKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGYKPD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+GAG   F ++ +   ++ ST+ N++++GNVVVAKNPCLHPGD+RVL+A++
Sbjct: 713  EYGQVFVQFTGAGHREFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLRAVN 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            VRALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV PM+Y PAP+ 
Sbjct: 773  VRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSI 832

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDH+VTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDF
Sbjct: 833  QLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEV 3200
            PKTGVPAEIP  LR KEYPDFMDKPDK SY S R+IGKLFR+VKD AP  +SI +FT+EV
Sbjct: 893  PKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTREV 952

Query: 3201 ARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFD 3380
            ARRSYD DMEVDGF DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFD
Sbjct: 953  ARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1012

Query: 3381 RRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDH 3560
            RRKD EAIS AVR+LR E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKR H
Sbjct: 1013 RRKDAEAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAH 1072

Query: 3561 YISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNLR 3680
            +ISFPWCVYD+LI+IKKD +R      ++SL  + S RL L+
Sbjct: 1073 FISFPWCVYDQLIQIKKDKARNRPVLSLSSLRAQLSHRLVLK 1114


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 1555 bits (4026), Expect = 0.0
 Identities = 770/1123 (68%), Positives = 912/1123 (81%), Gaps = 5/1123 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFP+L+ AE VK FLE+ TG GT+ ALEVK SK G R +A+VQFV+   A+ 
Sbjct: 1    MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLYFGSSYL+AW+   DI+Q  R +V  M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IINLASK--RLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISEDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS+KFG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDFTPS IG SS LCLQ   G+ LPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IE ALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YST+L PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL  + IR WM
Sbjct: 417  N-GIRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTNDIRSWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISA
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISA 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +  TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFARRVASKCGLQY-TPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  GWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGY PD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+GAG   F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 713  EYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVD 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV  M+Y PAP+ 
Sbjct: 773  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDH+VTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDF
Sbjct: 833  QLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKE 3197
            PKTGVPAEIP  LR KEYPDFMDK PDK +Y S R+IGKLFR+VKD AP  +SI  FT++
Sbjct: 893  PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRD 952

Query: 3198 VARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTF 3377
            VARRSYD D+EVDGF DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTF
Sbjct: 953  VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1012

Query: 3378 DRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRD 3557
            DRRKD EAIS AVR+LR E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRD
Sbjct: 1013 DRRKDAEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072

Query: 3558 HYISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNLR 3680
            H+ISFPWCVYD+LI+IKK+ +R     +++SL  + S +L L+
Sbjct: 1073 HFISFPWCVYDQLIQIKKEKARNRPVLNLSSLRAQLSHKLVLK 1115


>ref|XP_015895367.1| PREDICTED: RNA-dependent RNA polymerase 1 [Ziziphus jujuba]
          Length = 1126

 Score = 1554 bits (4024), Expect = 0.0
 Identities = 767/1133 (67%), Positives = 907/1133 (80%), Gaps = 16/1133 (1%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MG+TI VSGFP  V AE VK+FLE +TG+GTV A++++  K G R YA VQF +   AE 
Sbjct: 1    MGRTIQVSGFPSSVSAELVKKFLENLTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAEF 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LA A  RL++G+SYL A     DI+  PRT++H +E +TL+FGCQ S+EKFSVLWK 
Sbjct: 61   IISLAGA--RLWYGTSYLTARSMDTDIVAKPRTYLHSLENITLHFGCQISKEKFSVLWKR 118

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E+VSV FG G++++HF   +  VEY+LQLSYENIWQI L+ P GQT K LLIQL+GAPRI
Sbjct: 119  ENVSVDFGIGLRRLHFHFMYQYVEYKLQLSYENIWQIELHRPLGQTVKYLLIQLYGAPRI 178

Query: 867  YKK--------LNDSVHSYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQ 1019
            Y+K          D + ++F++TPDDQW+R TDFTPSC IGQSS LCL+LP G RLPNF+
Sbjct: 179  YEKDVPSSGDVYEDPIFNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFK 238

Query: 1020 DSFVFYKESQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPK 1199
            ++F +YKES+  F LETG PF+ NL LVPIV PP  + LPY I+FK+  L+Q GCL GP 
Sbjct: 239  ENFAYYKESEGRFSLETGFPFSCNLYLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPS 298

Query: 1200 LDTNFFRLVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAIS 1379
            LD  F+RLVDP+R ++  IEHAL+KLY +KECCY+P  WLNEQY KY   +  P SP IS
Sbjct: 299  LDAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLNEQYRKYFKSKRPPKSPMIS 358

Query: 1380 LDDGLVYVHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDL 1559
            LD GLVYV RVQITP +VYF GPE+NVSNRVLRHY +H+DNFLRVSFVDEE DKMYSTDL
Sbjct: 359  LDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRVSFVDEELDKMYSTDL 418

Query: 1560 SPKVAAGDENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDA 1739
            SP+ +A     +T LY+R+LS L++GIIIGNKKF+FLAFSSSQLRDNS WMFAP++G+ A
Sbjct: 419  SPRNSA----TKTGLYKRVLSVLRDGIIIGNKKFEFLAFSSSQLRDNSTWMFAPSDGITA 474

Query: 1740 DSIRRWMGDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSD 1919
              IR WMGDFR IRNVAKYAARLGQSF SSTETLSV   EVEKI DIE V  G KY FSD
Sbjct: 475  ADIREWMGDFRQIRNVAKYAARLGQSFGSSTETLSVSRHEVEKIPDIEVVYGGVKYAFSD 534

Query: 1920 GIGKISADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSE 2099
            GIGKIS++FAR+VA KCG    TPSAFQIRYGGYKGVVAVDP SS KLSLR SM KY+S+
Sbjct: 535  GIGKISSEFARKVASKCGCNGVTPSAFQIRYGGYKGVVAVDPTSSFKLSLRKSMCKYESD 594

Query: 2100 NTKLDVLSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEAL 2279
            N KLDVL++SK+QPCFLNRQ+I+LLSTLGV+D VF  KQ +AV QLD IL DPLRAQEAL
Sbjct: 595  NIKLDVLAYSKFQPCFLNRQLISLLSTLGVEDQVFLKKQSKAVQQLDAILTDPLRAQEAL 654

Query: 2280 DLMSPGENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGC 2459
            DLMSPGEN+N+LKE+L CGYKPD EP+LSMMLQTFR+SKLL+LR K+RIF+P  R MMGC
Sbjct: 655  DLMSPGENTNVLKELLMCGYKPDTEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAMMGC 714

Query: 2460 LDETGILGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDV 2639
            LDET  L YGQVFVQFSG+ R   + +S M   N  T   ++V G+VVVAKNPCLHPGDV
Sbjct: 715  LDETRTLEYGQVFVQFSGS-RYRQFGDSPMLGGN-GTKQRFIVTGSVVVAKNPCLHPGDV 772

Query: 2640 RVLKAIDVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMD 2819
            RVL+A++V  LHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ +LIP  Q+ PMD
Sbjct: 773  RVLRAVNVSELHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPCHQIEPMD 832

Query: 2820 YSPAPTSRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARL 2999
            Y+PAP+   D DVTIEEV+EYF NYIVNDSLGIIANAHTVFADKE   A+S PC+ELARL
Sbjct: 833  YTPAPSMLKDDDVTIEEVQEYFANYIVNDSLGIIANAHTVFADKEYGKAMSSPCVELARL 892

Query: 3000 FSIAVDFPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSI 3179
            FSIAVDFPKTG+PA IPPHL VKEYPDFM+KPDK +YES  +IGKLFREVKDIAP+T+SI
Sbjct: 893  FSIAVDFPKTGIPAVIPPHLHVKEYPDFMEKPDKQTYESQNVIGKLFREVKDIAPNTSSI 952

Query: 3180 RSFTKEVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIM 3359
            RSFT EVAR+SYDPDMEVDGF DY+D+A+ YK  YD KLGNL++YYGIKTEAEILSG I+
Sbjct: 953  RSFTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSIL 1012

Query: 3360 KMSKTFDRRKDVEAISAAVRSLRNEVRSWFKKGN-----ESDDPYAKASAWYHVTYHPDF 3524
            +MSK+F +R+D E+I+ AVR+LR E R+WF +       ESDD YAKASAWYHVTYHP +
Sbjct: 1013 RMSKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSY 1072

Query: 3525 WGSYNVGLKRDHYISFPWCVYDKLIKIKKDNS--RRASDMASLEREFSRRLNL 3677
            WGSYN G+ RDHY+SF WCVYD+L++IK+D +  RR   ++SLE  F   L L
Sbjct: 1073 WGSYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRL 1125


>ref|XP_015160223.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
            [Solanum tuberosum]
          Length = 1115

 Score = 1553 bits (4021), Expect = 0.0
 Identities = 772/1123 (68%), Positives = 910/1123 (81%), Gaps = 5/1123 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFPDL+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQFV+   A+ 
Sbjct: 1    MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLYFGSSYL+AW+   DI+Q  R +V  M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IINLASK--RLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS+KFG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+ NFFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVNFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IE ALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +Y RILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WM
Sbjct: 417  N-GIRTNIYVRILSTLQKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISA
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEIIPDVKV--HGTSYVFSDGIGKISA 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +  TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFARRVASKCGLQY-TPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPCFLNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  EWSKYQPCFLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGY PD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+G+G   F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 713  EYGQVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVD 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV  M+Y PAP+ 
Sbjct: 773  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDF
Sbjct: 833  QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKE 3197
            PKTGVPAEIP  LR KEYPDFMDK PDK +Y S R+IGKL+R+VKD AP  +S   FT++
Sbjct: 893  PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRD 952

Query: 3198 VARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTF 3377
            VARRSYD D+EVDGF DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTF
Sbjct: 953  VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1012

Query: 3378 DRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRD 3557
            DRRKD EAIS AVR+LR E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRD
Sbjct: 1013 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072

Query: 3558 HYISFPWCVYDKLIKIKKDN--SRRASDMASLEREFSRRLNLR 3680
            H+ISFPWCVYD+LI+IKK+   +R   +++SL  + S +L L+
Sbjct: 1073 HFISFPWCVYDQLIQIKKEKALNRPVLNLSSLRAQLSHKLVLK 1115


>ref|XP_006366109.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
            [Solanum tuberosum]
          Length = 1115

 Score = 1549 bits (4010), Expect = 0.0
 Identities = 771/1123 (68%), Positives = 910/1123 (81%), Gaps = 5/1123 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFPDL+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQFV+   A+ 
Sbjct: 1    MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLYFGSSYL+A +   D++Q    +V  M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IINLASK--RLYFGSSYLKAREMETDLVQLWE-YVDHMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS+KFG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IE ALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WM
Sbjct: 417  N-GIRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SSTETLSV   E+E I D++   +GT YVFSDGIGKISA
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISA 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +  TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFARRVASKCGLQH-TPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  GWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGY PD EPFLSMMLQTFR+SKLLDLR K+RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRLMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+G+G   F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 713  EYGQVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVD 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV  M+Y PAP+ 
Sbjct: 773  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832

Query: 2841 RLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDF 3020
            +LDHDVTIEEVEEYFTNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA L SIAVDF
Sbjct: 833  QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDF 892

Query: 3021 PKTGVPAEIPPHLRVKEYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKE 3197
            PKTGVPAEIPP LR KEYPDFMDK PDK +Y S R+IGKL+R+VKD AP  +S   FT++
Sbjct: 893  PKTGVPAEIPPQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRD 952

Query: 3198 VARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTF 3377
            VARRSYD D+EVDGF DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTF
Sbjct: 953  VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1012

Query: 3378 DRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRD 3557
            DRRKD EAIS AVR+LR E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRD
Sbjct: 1013 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072

Query: 3558 HYISFPWCVYDKLIKIKKDNSRR--ASDMASLEREFSRRLNLR 3680
            H+ISFPWCVYD+LI+IKK+ +R     +++SL  + SR+L L+
Sbjct: 1073 HFISFPWCVYDQLIQIKKEKARNRPVLNLSSLRAQLSRKLVLK 1115


>ref|XP_015160221.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
            [Solanum tuberosum] gi|971584258|ref|XP_015160222.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1
            isoform X1 [Solanum tuberosum]
          Length = 1140

 Score = 1539 bits (3985), Expect = 0.0
 Identities = 772/1148 (67%), Positives = 910/1148 (79%), Gaps = 30/1148 (2%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFPDL+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQFV+   A+ 
Sbjct: 1    MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLYFGSSYL+AW+   DI+Q  R +V  M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IINLASK--RLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS+KFG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+ NFFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVNFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IE ALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +Y RILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WM
Sbjct: 417  N-GIRTNIYVRILSTLQKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISA
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEIIPDVKV--HGTSYVFSDGIGKISA 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +  TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFARRVASKCGLQY-TPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPCFLNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  EWSKYQPCFLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGY PD EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+G+G   F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 713  EYGQVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVD 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV  M+Y PAP+ 
Sbjct: 773  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832

Query: 2841 RLDHDVTIE-------------------------EVEEYFTNYIVNDSLGIIANAHTVFA 2945
            +LDHDVTIE                         EVEEYFTNYIVNDSLGIIANAH VFA
Sbjct: 833  QLDHDVTIERGDWPVCATTVQVLRNSFSPVCLLQEVEEYFTNYIVNDSLGIIANAHVVFA 892

Query: 2946 DKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMDK-PDKNSYESTR 3122
            D+E +MA+S+PC +LA LFSIAVDFPKTGVPAEIP  LR KEYPDFMDK PDK +Y S R
Sbjct: 893  DREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISER 952

Query: 3123 IIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGN 3302
            +IGKL+R+VKD AP  +S   FT++VARRSYD D+EVDGF DY+DEAF+YKTEYDNKLGN
Sbjct: 953  VIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGN 1012

Query: 3303 LMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYA 3482
            LM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+LR E R+WFK+ N+ DD   
Sbjct: 1013 LMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLP 1072

Query: 3483 KASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKIKKDN--SRRASDMASLERE 3656
            KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+IKK+   +R   +++SL  +
Sbjct: 1073 KASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPVLNLSSLRAQ 1132

Query: 3657 FSRRLNLR 3680
             S +L L+
Sbjct: 1133 LSHKLVLK 1140


>ref|XP_015160224.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
            [Solanum tuberosum] gi|971584264|ref|XP_015160225.1|
            PREDICTED: probable RNA-dependent RNA polymerase 1
            isoform X1 [Solanum tuberosum]
          Length = 1140

 Score = 1535 bits (3974), Expect = 0.0
 Identities = 771/1148 (67%), Positives = 910/1148 (79%), Gaps = 30/1148 (2%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFVNISCAEI 506
            MGKTI V GFPDL+ AE VK FLE+ TG GTV ALEVK SK G R +A+VQFV+   A+ 
Sbjct: 1    MGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 507  IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 686
            I+ LAS   RLYFGSSYL+A +   D++Q    +V  M+ +TLNFGCQ S +KF+VL   
Sbjct: 61   IINLASK--RLYFGSSYLKAREMETDLVQLWE-YVDHMDGITLNFGCQISDDKFAVLGST 117

Query: 687  ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 866
            E VS+KFG G+KK  F L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118  E-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRI 176

Query: 867  YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 1046
            YK+L +S +S+F+ETPDDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E 
Sbjct: 177  YKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAER 236

Query: 1047 QDPFRLETGVPF--AANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            ++   L+TG  F  +   ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFR
Sbjct: 237  ENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFR 296

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1400
            LVDP+R ++  IE ALEKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVY
Sbjct: 297  LVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVY 356

Query: 1401 VHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAG 1580
            V RV +TP +VYF GPEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G
Sbjct: 357  VRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416

Query: 1581 DENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWM 1760
            +   RT +YERILSTL++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WM
Sbjct: 417  N-GIRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWM 475

Query: 1761 GDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISA 1940
            GDF  I+NVAKYAARLGQSF SSTETLSV   E+E I D++   +GT YVFSDGIGKISA
Sbjct: 476  GDFSQIKNVAKYAARLGQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISA 533

Query: 1941 DFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVL 2120
            DFARRVA KCG +  TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL
Sbjct: 534  DFARRVASKCGLQH-TPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVL 592

Query: 2121 SWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGE 2300
             WSKYQPC+LNRQ++TLLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGE
Sbjct: 593  GWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGE 652

Query: 2301 NSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGIL 2480
            N+NILK ML CGY PD EPFLSMMLQTFR+SKLLDLR K+RIF+P  R MMGCLDE+  L
Sbjct: 653  NTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRLMMGCLDESRTL 712

Query: 2481 GYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAID 2660
             YGQVFVQF+G+G   F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A+D
Sbjct: 713  EYGQVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVD 772

Query: 2661 VRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAPTS 2840
            V ALHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ D+IPPRQV  M+Y PAP+ 
Sbjct: 773  VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832

Query: 2841 RLDHDVTIE-------------------------EVEEYFTNYIVNDSLGIIANAHTVFA 2945
            +LDHDVTIE                         EVEEYFTNYIVNDSLGIIANAH VFA
Sbjct: 833  QLDHDVTIERGDWPVCATTVQVLRNSFSPVCLLQEVEEYFTNYIVNDSLGIIANAHVVFA 892

Query: 2946 DKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVKEYPDFMDK-PDKNSYESTR 3122
            D+E +MA+S+PC +LA L SIAVDFPKTGVPAEIPP LR KEYPDFMDK PDK +Y S R
Sbjct: 893  DREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPPQLRPKEYPDFMDKPPDKTTYISER 952

Query: 3123 IIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGN 3302
            +IGKL+R+VKD AP  +S   FT++VARRSYD D+EVDGF DY+DEAF+YKTEYDNKLGN
Sbjct: 953  VIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGN 1012

Query: 3303 LMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLRNEVRSWFKKGNESDDPYA 3482
            LM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+LR E R+WFK+ N+ DD   
Sbjct: 1013 LMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLP 1072

Query: 3483 KASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKIKKDNSRR--ASDMASLERE 3656
            KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+IKK+ +R     +++SL  +
Sbjct: 1073 KASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKARNRPVLNLSSLRAQ 1132

Query: 3657 FSRRLNLR 3680
             SR+L L+
Sbjct: 1133 LSRKLVLK 1140


>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 1521 bits (3938), Expect = 0.0
 Identities = 757/1127 (67%), Positives = 900/1127 (79%), Gaps = 10/1127 (0%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPR-PYARVQFVNISCAE 503
            M KTI V GFP +V A+ +K FLE+ TG+GT+ ALE+K  + G    +A+VQF +   AE
Sbjct: 1    MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60

Query: 504  IIMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWK 683
             I+ L     ++++G +YL+A +  +DII  PR F+H M+++TL+FGCQ S E+F VLWK
Sbjct: 61   FIITLCKK--KVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWK 118

Query: 684  AESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPR 863
            A +VSVKFG+G++K +F L H S EY+L+LSYENIWQI L +P GQ  K LLIQL GAP+
Sbjct: 119  AINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQ 178

Query: 864  IYKKLNDSVHSYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYK 1040
            IY+K    +  YF+E PDDQW+R  DFTPSC IGQS  LCL+LPYG +LPNF+++F +YK
Sbjct: 179  IYEKDVPVLSYYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRENFAYYK 238

Query: 1041 ESQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 1220
            E+   F LE+G  ++ NL LVPI+ PP+G  LP++ILFK+  LVQ GCL GP LDT+FFR
Sbjct: 239  ENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFR 298

Query: 1221 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQP--NSPAISLDDGL 1394
            LVDP+RF I +IEHALEKLY++KECCY+PV WL+EQY   RT+ ++P   SPAISLD GL
Sbjct: 299  LVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQY---RTYVKKPVAGSPAISLDTGL 355

Query: 1395 VYVHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVA 1574
            VYV RVQITP +VYF GPEVNVSNRVLR+Y + +DNFLRVSF+DE  +K++ST +SP+++
Sbjct: 356  VYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPRMS 415

Query: 1575 AGDENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRR 1754
               E +RT +Y RILS L+ GI+IG+KKFDFLAFSSSQLRDNS WMFA   GL A  IR 
Sbjct: 416  K--EGRRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRS 473

Query: 1755 WMGDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKI 1934
            WMGDF  IRNVAKYAARLGQSFSSS ETL V + E+E I DIE  +  T YVFSDGIGKI
Sbjct: 474  WMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKI 533

Query: 1935 SADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLD 2114
            S   A RVAIKCG KS+TPSAFQIRYGGYKGVVAVDP SS KLSLR SM KY+S+NT LD
Sbjct: 534  SPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLD 593

Query: 2115 VLSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSP 2294
            VL+WSKYQP FLNRQ+ITLLSTLGVKD+VF+ KQR AV QLD IL DP+ AQEAL+LMSP
Sbjct: 594  VLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSP 653

Query: 2295 GENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETG 2474
            GEN+N+LKEML CGYKPD EPFLSMMLQTFR++KLL+LR K RIFVP  R MMGCLDET 
Sbjct: 654  GENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETR 713

Query: 2475 ILGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKA 2654
             L YG+VFVQ SG G    + +S M   + S   N+++EG +VVAKNPCLHPGDVRVL A
Sbjct: 714  TLEYGEVFVQISGTGGRQSFGDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWA 773

Query: 2655 IDVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPMDYSPAP 2834
            ++V  LHHMVDCVVFP +G RPHPNECSGSDLDGDIYFVCW+ DLIPP+Q++PMDY+PAP
Sbjct: 774  VNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAP 833

Query: 2835 TSRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAV 3014
            T  LDHDV IEEVEEYFTNYIVNDSLGIIANAHTVFADKE + A  +PC ELA+LFSIAV
Sbjct: 834  TKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAV 893

Query: 3015 DFPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTK 3194
            DFPKTGVPAEIP +LRVKEYPDFM+K DK +YES  +IGKLFREVKDIAPH  +IRSFT+
Sbjct: 894  DFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTR 953

Query: 3195 EVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKT 3374
            +VAR+SYDPDMEV GF DYV +AF YK+EYD KLGNLM+YYGIKTE+EILSG IM+MSK+
Sbjct: 954  DVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKS 1013

Query: 3375 FDRRKDVEAISAAVRSLRNEVRSWFKK-----GNESDDPYAKASAWYHVTYHPDFWGSYN 3539
            FDRRKD EAI  AV+SLR E R+WF K      +E+DD YAKASAWYHVTYHPD+WG YN
Sbjct: 1014 FDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYN 1073

Query: 3540 VGLKRDHYISFPWCVYDKLIKIK-KDNSRRASDMASLEREFSRRLNL 3677
             G+ RDH++SFPWCVYDKLI  K K  S R+  ++SLER  S+ L L
Sbjct: 1074 EGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 1120


>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score = 1521 bits (3937), Expect = 0.0
 Identities = 759/1134 (66%), Positives = 901/1134 (79%), Gaps = 17/1134 (1%)
 Frame = +3

Query: 327  MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSK-RGPRPYARVQFVNISCAE 503
            M KT+ VSGFP    A  V+ FLE  TG GTV AL+++ ++ RG R YA VQF      E
Sbjct: 1    MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGARKYAIVQFTTTRATE 60

Query: 504  IIMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWK 683
             I+ LA+   RL++G SYL A     DII  PR+ +H ME VTL+FG QTS+EKFS +W 
Sbjct: 61   QIISLANQ--RLWYGRSYLNARPMDRDIIPQPRSSLHTMESVTLHFGYQTSKEKFSAVWS 118

Query: 684  AESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPR 863
              +VSV FG GM+K+HF L HN  EY+L L +ENIWQI L+ P GQT K LLIQL+GAPR
Sbjct: 119  GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178

Query: 864  IYKK--------LNDSVHSYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNF 1016
            IY++          D + +YFR+ PD+QW+RTTDFTPSC IG SS LCL+LP  ++LPNF
Sbjct: 179  IYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNF 238

Query: 1017 QDSFVFYKESQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGP 1196
             ++F +YKE++  F LE+G  F+ N  LVPIV P  G+ LPY ILF+V  LVQ GCL G 
Sbjct: 239  NENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298

Query: 1197 KLDTNFFRLVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAI 1376
             LD  F+RLVDP R  +R IEHALEKLY++KECCY+P  W NEQY KY T    P SP +
Sbjct: 299  MLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPVL 358

Query: 1377 SLDDGLVYVHRVQITPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTD 1556
            SLD GLVYV++VQITP +V+F GPEVN+SNRVLR Y + +DNFLRVSFVDEE +K++STD
Sbjct: 359  SLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHSTD 418

Query: 1557 LSPKVAAGDENKRTKLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLD 1736
            +SP+ ++ +E +RT +Y RILSTL+ GI+IG+KKF+FLAFSSSQLR+NS WMFA   GL 
Sbjct: 419  VSPRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLT 478

Query: 1737 ADSIRRWMGDFRDIRNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFS 1916
            A  IRRWMG F  IRNVA+YAARLGQSFSSSTETLSV   E+E I DIE  R GT+Y+FS
Sbjct: 479  AADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVSRHEIEIISDIEVSRGGTRYLFS 538

Query: 1917 DGIGKISADFARRVAIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQS 2096
            DGIGKISA+FAR+VAIKCG K  TPSAFQIRY GYKGVVAVDP S+ KLSLR SM KY+S
Sbjct: 539  DGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSTKKLSLRMSMFKYES 598

Query: 2097 ENTKLDVLSWSKYQPCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEA 2276
            ENTKLDVL+ SKYQPCFLNRQ+ITLLSTLGV D+ F+ KQREAV QLD IL DPLRAQEA
Sbjct: 599  ENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAILTDPLRAQEA 658

Query: 2277 LDLMSPGENSNILKEMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMG 2456
            L LMSPGEN+NILKEML CGY+PD EPFLSMMLQTFR+SKLL+LR K RIF+P  R MMG
Sbjct: 659  LVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRLMMG 718

Query: 2457 CLDETGILGYGQVFVQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGD 2636
            CLDET  L +GQVFVQFSG+     Y+ S++  +     C Y++EG+VVVAKNPCLHPGD
Sbjct: 719  CLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQC-YLIEGSVVVAKNPCLHPGD 777

Query: 2637 VRVLKAIDVRALHHMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWESDLIPPRQVSPM 2816
            VR+LKA+DV ALHHMVDCVVFP +G RPHPN+CSGSDLDGDIYFVCW+ +LIP +Q+SPM
Sbjct: 778  VRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGDIYFVCWDPELIPSQQISPM 837

Query: 2817 DYSPAPTSRLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELAR 2996
            DY+P PT +LDHDVTIEEVEEYFTNYIVNDSLGIIANAHT FADKE+  A+SEPCLELAR
Sbjct: 838  DYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKESLKAMSEPCLELAR 897

Query: 2997 LFSIAVDFPKTGVPAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTS 3176
             FSIAVDFPKTGVPAEIP +LRV+EYPDFM+KPDK SYES  +IGKLFREVKDIAP T+S
Sbjct: 898  KFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSS 957

Query: 3177 IRSFTKEVARRSYDPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGI 3356
            IRSFT +VAR+ YDPDMEVDGF DY+D+AF YK+ YD KLGNLMEYYGIKTEAE+LSG  
Sbjct: 958  IRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSF 1017

Query: 3357 MKMSKTFDRRKDVEAISAAVRSLRNEVRSWF-KKG----NESDDPYAKASAWYHVTYHPD 3521
            MKMSK+F +++D EAI  AVRSLR E RSWF +KG    +++DD  AKASAWYHVTYH +
Sbjct: 1018 MKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHN 1077

Query: 3522 FWGSYNVGLKRDHYISFPWCVYDKLIKIKKDNS--RRASDMASLEREFSRRLNL 3677
            +WG YN G+ RDH++SFPWC+YDKLI+IKK+++  RR+  + S+ER+FSR L+L
Sbjct: 1078 YWGCYNEGMNRDHFLSFPWCLYDKLIQIKKNSARIRRSRILHSVERQFSRGLHL 1131