BLASTX nr result
ID: Rehmannia28_contig00004118
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00004118
(1054 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 515 e-176
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 511 e-167
ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118... 454 e-147
ref|XP_015577292.1| PREDICTED: uncharacterized mitochondrial pro... 413 e-140
emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera] 392 e-123
emb|CAN74499.1| hypothetical protein VITISV_013001 [Vitis vinifera] 388 e-123
gb|ABV72583.1| unknown, partial [Oryza sativa Japonica Group] 367 e-122
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] 384 e-122
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] 387 e-120
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] 387 e-119
gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposo... 374 e-117
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis] 376 e-116
gb|KYP77409.1| Retrovirus-related Pol polyprotein from transposo... 354 e-116
ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [... 367 e-116
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 374 e-114
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group] 367 e-114
emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group] 358 e-114
ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502... 364 e-113
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 358 e-110
gb|ADB85257.1| putative retrotransposon protein, partial [Phyllo... 361 e-109
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 515 bits (1327), Expect = e-176
Identities = 262/355 (73%), Positives = 294/355 (82%), Gaps = 5/355 (1%)
Frame = -2
Query: 1050 TISSSPATVDPAP-RYPSRVRKSTQLPDFVXXXXXXXXXXXXXSIHNLSEPTS*KEEALD 874
T PA VDP P RYPSR RKSTQLPDFV SIH+LSEP+S +E LD
Sbjct: 335 TAQPPPAIVDPPPPRYPSRHRKSTQLPDFVYSTYSASFVSFLSSIHSLSEPSSYEEAILD 394
Query: 873 PLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGF 694
PLWQQAMAEEL AL KT+TWDLVPLP GK AIGSRWVYKIKTKSDGS+ERYKARLVAKGF
Sbjct: 395 PLWQQAMAEELFALRKTDTWDLVPLPPGKRAIGSRWVYKIKTKSDGSVERYKARLVAKGF 454
Query: 693 SQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPG 514
SQQYG+DYEETFAPVAKMTT+RTLIA+AS R+W +SQMDV+NAFLNG L EEVYMVPP G
Sbjct: 455 SQQYGMDYEETFAPVAKMTTIRTLIAVASIRQWDVSQMDVKNAFLNGELHEEVYMVPPQG 514
Query: 513 VIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLS 334
V H +GEVCKLKKALYGLKQAPRAWFEKF I SLGFR SDHDSALFI++T G I+LS
Sbjct: 515 VSHNQGEVCKLKKALYGLKQAPRAWFEKFYTVITSLGFRSSDHDSALFIRSTTHGRIILS 574
Query: 333 LYVDDMIITGNDVDGIALLKS----ELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSK 166
LYVDDMIITG+DV GI LK+ +L+ FEMKDLG+LRYFLGIEV++SPKGYLLSQSK
Sbjct: 575 LYVDDMIITGDDVSGINKLKAQLAKQLAKQFEMKDLGTLRYFLGIEVAYSPKGYLLSQSK 634
Query: 165 YATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
Y IL++ARL+DT+ D+P+E+NV+Y+ SDG PL DPTLYR +VGSLVYLTITR
Sbjct: 635 YIANILEQARLSDTRAADTPLELNVKYAPSDGVPLPDPTLYRTLVGSLVYLTITR 689
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 511 bits (1316), Expect = e-167
Identities = 257/346 (74%), Positives = 287/346 (82%)
Frame = -2
Query: 1041 SSPATVDPAPRYPSRVRKSTQLPDFVXXXXXXXXXXXXXSIHNLSEPTS*KEEALDPLWQ 862
+S VDP PR R+RKST+LPDF IH L EP+S KE LDPL Q
Sbjct: 829 ASSEIVDPPPRQSIRIRKSTKLPDFAYSCYSSSFTSFLAYIHCLFEPSSYKEAILDPLGQ 888
Query: 861 QAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGFSQQY 682
QAM EELSAL KT+TWDLVPLP GK+ +G RWVYKIKT SDGSIERYKARLVAKG+SQQY
Sbjct: 889 QAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKTNSDGSIERYKARLVAKGYSQQY 948
Query: 681 GLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPGVIHY 502
G+DYEETFAP+AKMTT+RTLIA+AS R+WHISQ+DV+NAFLNG+LQEEVYM PPPG+ H
Sbjct: 949 GMDYEETFAPIAKMTTIRTLIAVASIRQWHISQLDVKNAFLNGDLQEEVYMAPPPGISHD 1008
Query: 501 RGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLSLYVD 322
G VCKLKKALYGLKQAPRAWFEKFS+ I SLGF S HDSALFIK T AG I+LSLYVD
Sbjct: 1009 SGYVCKLKKALYGLKQAPRAWFEKFSIVISSLGFVSSSHDSALFIKCTDAGRIILSLYVD 1068
Query: 321 DMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSKYATGILDR 142
DMIITG+D+DGI++LK+EL+ FEMKDLG LRYFLGIEV++SP+GYLLSQSKY IL+R
Sbjct: 1069 DMIITGDDIDGISVLKTELARRFEMKDLGYLRYFLGIEVAYSPRGYLLSQSKYVANILER 1128
Query: 141 ARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTIT 4
ARLTD KTVD+PIEVN RYSSSDG PL DPTLYR IVGSLVYLTIT
Sbjct: 1129 ARLTDNKTVDTPIEVNARYSSSDGLPLIDPTLYRTIVGSLVYLTIT 1174
>ref|XP_011014816.1| PREDICTED: uncharacterized protein LOC105118536 [Populus euphratica]
Length = 1202
Score = 454 bits (1168), Expect = e-147
Identities = 228/300 (76%), Positives = 253/300 (84%)
Frame = -2
Query: 900 TS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERY 721
+S KE LDPLWQQAM EELS L KT TWDLVPLP GK+ + RWVYKIKT SDGSIERY
Sbjct: 408 SSYKEAILDPLWQQAMDEELSVLHKTYTWDLVPLPPGKSVVSCRWVYKIKTNSDGSIERY 467
Query: 720 KARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQE 541
KARLVAKG+SQQYG+DYEETFAP+AKMTT+RTLI +AS R+WHISQ+DV+NAFLNG+LQE
Sbjct: 468 KARLVAKGYSQQYGMDYEETFAPIAKMTTIRTLIVVASIRQWHISQLDVKNAFLNGDLQE 527
Query: 540 EVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKN 361
EVYM PPP + H G VCKLKKALYGLKQAPRAWFEKFS+ I S GF S HDSALFIK
Sbjct: 528 EVYMAPPPSISHDSGYVCKLKKALYGLKQAPRAWFEKFSIMISSFGFVPSSHDSALFIKC 587
Query: 360 TAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYL 181
T AG I+LSLYVDDMIITG+ +DGI++ K+EL+ FEMKDLG LRYFLGIEV++SP+GYL
Sbjct: 588 TDAGRIILSLYVDDMIITGDGIDGISVSKTELARRFEMKDLGYLRYFLGIEVAYSPRGYL 647
Query: 180 LSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
LSQSKY IL RARLTD K VD+ IEVN RYSSSDG L D TLYR IVGSLVYLTITR
Sbjct: 648 LSQSKYVVDILQRARLTDNKIVDTLIEVNARYSSSDGLLLIDLTLYRTIVGSLVYLTITR 707
>ref|XP_015577292.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Ricinus communis]
Length = 430
Score = 413 bits (1062), Expect = e-140
Identities = 208/280 (74%), Positives = 238/280 (85%)
Frame = -2
Query: 843 LSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGFSQQYGLDYEE 664
+ AL +T TWDLV LP G+ AIGSRWVYKIKTKSDGSIERYKARLVAKG+SQ+Y +DYEE
Sbjct: 1 MDALHQTHTWDLVSLPAGERAIGSRWVYKIKTKSDGSIERYKARLVAKGYSQEYSMDYEE 60
Query: 663 TFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPGVIHYRGEVCK 484
TFAP AKMTTVRTLIA+AS RRW I+QMD++NAFLNG+L EEVY VPPPG+ H+ GEVC+
Sbjct: 61 TFAPFAKMTTVRTLIAVASIRRWDITQMDIKNAFLNGDLHEEVYTVPPPGLDHHPGEVCR 120
Query: 483 LKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLSLYVDDMIITG 304
L+KALY LKQAPRAWFEKFS I SL F S HDSALFIK T+ G I+LSLYVD MIITG
Sbjct: 121 LRKALYSLKQAPRAWFEKFSAVITSLDFHPSHHDSALFIKCTSTGRILLSLYVDGMIITG 180
Query: 303 NDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSKYATGILDRARLTDT 124
+DV GI+LLKSEL+ F MKDLGSLRYFL IEV+ SPKGYLLSQSKY + I +RA L+D
Sbjct: 181 DDVVGISLLKSELTRCFAMKDLGSLRYFLCIEVASSPKGYLLSQSKYISDIFERACLSDN 240
Query: 123 KTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTIT 4
KTVD+PIE+N RYS+SDG+ L D +LYR +VGSLVYLTIT
Sbjct: 241 KTVDTPIELNARYSASDGSLLPDLSLYRTVVGSLVYLTIT 280
>emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]
Length = 1168
Score = 392 bits (1006), Expect = e-123
Identities = 187/304 (61%), Positives = 241/304 (79%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
L EP + +E + DPLWQ AM EEL AL+K TWDLVPLP G++ +G +W+YKIKT+SDGS
Sbjct: 659 LHEPQTYREASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGS 718
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
+ERYKARLVAKGF+Q+YG+DYEETFAPVA++++VR L+A+A+AR+W + QMDV+NAFLNG
Sbjct: 719 VERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARQWDLFQMDVKNAFLNG 778
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L E VYM PPPG+ +VC L++ALYGLKQAPRAWF KFS +I LG+ S +DSAL
Sbjct: 779 DLSEAVYMQPPPGLFVESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSAL 838
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
F++ T G I+L LYVDDMIITGND+ GI LK LS FEMKDLG L YFLG+E++ S
Sbjct: 839 FLRRTDKGTILLLLYVDDMIITGNDLRGIQELKDFLSQQFEMKDLGHLSYFLGLEITHST 898
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G ++Q+KYA+ +L +A LTD+K VD+P+E+N + S G PL +P+LYR +VGSLVYL
Sbjct: 899 YGLYITQAKYASDLLSQAGLTDSKNVDTPVELNAHLTPSGGKPLSNPSLYRRLVGSLVYL 958
Query: 12 TITR 1
T+TR
Sbjct: 959 TVTR 962
>emb|CAN74499.1| hypothetical protein VITISV_013001 [Vitis vinifera]
Length = 993
Score = 388 bits (996), Expect = e-123
Identities = 185/304 (60%), Positives = 241/304 (79%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
L EP + +E ++D LWQ AM EEL AL+K TWDLV LP G++ +G +W+YKIKT+SDGS
Sbjct: 484 LHEPQTYREASIDHLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGS 543
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
+ERYKARLVAKGF+Q+YG+DYEETFAPVA++++VR L+A+A+AR+W + QMDV+N FLNG
Sbjct: 544 VERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVKNVFLNG 603
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L EEVYM PPPG+ +VC L++ALYGLKQAPRAWF KFS +I LG+ S +D AL
Sbjct: 604 DLSEEVYMQPPPGLSVESNKVCHLRRALYGLKQAPRAWFAKFSSTIFCLGYTASPYDFAL 663
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
F++ TA G I+L LYVDDMIITG+D+ GI LK LS FEMKDLG L YFLG+E++ S
Sbjct: 664 FLRRTAKGTILLLLYVDDMIITGDDLSGIQELKDLLSQQFEMKDLGHLSYFLGLEITHST 723
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G ++Q+KYA+ +L +A LTD+KTVD+P+E+N + S G PL +P+LYR +VGSLVYL
Sbjct: 724 DGLYITQAKYASDLLSQAGLTDSKTVDTPVELNAHLTPSGGKPLSNPSLYRRLVGSLVYL 783
Query: 12 TITR 1
T+TR
Sbjct: 784 TVTR 787
>gb|ABV72583.1| unknown, partial [Oryza sativa Japonica Group]
Length = 392
Score = 367 bits (942), Expect = e-122
Identities = 182/302 (60%), Positives = 233/302 (77%)
Frame = -2
Query: 906 EPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIE 727
EP++ +E + P W+ AM+EEL+AL +T TWD+VPLP I +WVYK+KTKSDG +E
Sbjct: 21 EPSTYQEAIVLPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCKWVYKVKTKSDGQVE 80
Query: 726 RYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNL 547
RYKARLVA+GF Q +G DY+ETFAPVA MTTVRTLIA+A+ R W ISQMDV+NAFL+G+L
Sbjct: 81 RYKARLVARGFQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTISQMDVKNAFLHGDL 140
Query: 546 QEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFI 367
EEVYM PPPGV G V +L++ALYGLKQAPRAWF +FS +L+ GF SDHD ALFI
Sbjct: 141 HEEVYMHPPPGVEAPPGHVFRLRRALYGLKQAPRAWFARFSSVVLAAGFSPSDHDPALFI 200
Query: 366 KNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKG 187
++ G +L LYVDDM+ITG+D++ IA +K +LS F M DLG L YFLGIEV+ + G
Sbjct: 201 HTSSRGRTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGIEVTSTVDG 260
Query: 186 YLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTI 7
Y LSQ +Y +L ++ LTD++T +P+E++VR S+DGTPLDDP+ YR +VGSLVYLT+
Sbjct: 261 YYLSQHRYIEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLVGSLVYLTV 320
Query: 6 TR 1
TR
Sbjct: 321 TR 322
>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
Length = 1013
Score = 384 bits (987), Expect = e-122
Identities = 182/302 (60%), Positives = 238/302 (78%)
Frame = -2
Query: 906 EPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIE 727
+P + +E + DPLWQ AM EEL AL+K TWDLVPLP G++ +G +W+YKIKT+SDGS+E
Sbjct: 506 QPQTYREASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVE 565
Query: 726 RYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNL 547
RYKARLVAKGF+Q+YG+DYEETFAPVA++++VR L+A+A+AR+W + QMDV+NAFLNG+L
Sbjct: 566 RYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVATARQWDLFQMDVKNAFLNGDL 625
Query: 546 QEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFI 367
E VYM PPP + +VC L++ALYGLKQAPRAWF KFS +I LG+ S +DSALF+
Sbjct: 626 NEAVYMQPPPSLSVESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSALFL 685
Query: 366 KNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKG 187
+ T G I+L LYVDDMIITGND+ GI LK LS FEMKDLG L YFLG+E++ S G
Sbjct: 686 RRTDKGTILLLLYVDDMIITGNDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDG 745
Query: 186 YLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTI 7
++Q+KYA+ +L + LTD+K VD+P+E+N + S G PL +P+LYR +VG+LVYLT+
Sbjct: 746 LYITQAKYASDLLSQVGLTDSKNVDTPVELNAHLTPSRGKPLSNPSLYRRLVGNLVYLTV 805
Query: 6 TR 1
TR
Sbjct: 806 TR 807
>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 387 bits (993), Expect = e-120
Identities = 185/304 (60%), Positives = 240/304 (78%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
L EP + +E + DPLWQ AM EEL AL+K TWDLV LP G++ +G +W+YKIKT+SDGS
Sbjct: 872 LHEPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGS 931
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
+ERYKARLVAKGF+Q+YG+DYEETFAPVA++++VR L+A+A+AR+W + QMDV+NAFLNG
Sbjct: 932 VERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARKWDLFQMDVKNAFLNG 991
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L EEVYM PPPG+ +VC L++ALYGLKQAPRAWF KFS +I LG+ S +DSAL
Sbjct: 992 DLSEEVYMQPPPGLSIESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSAL 1051
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
F++ T I+L LYVDDMIITG+D+ GI LK LS FEMKDLG L YFLG+E++ S
Sbjct: 1052 FLRRTDKXTILLLLYVDDMIITGDDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHST 1111
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G ++Q+KYA+ +L +A LTD+KTVD+P+E+N + G PL +P+LYR +VGSLVYL
Sbjct: 1112 DGLYITQAKYASDLLSQAGLTDSKTVDTPVELNAHLTPLGGKPLSNPSLYRRLVGSLVYL 1171
Query: 12 TITR 1
T+TR
Sbjct: 1172 TVTR 1175
>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 387 bits (994), Expect = e-119
Identities = 185/304 (60%), Positives = 239/304 (78%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
L EP + +E + DPLWQ AM EEL AL+K TWDLVPLP G++ +G +W+YKIKT+SDGS
Sbjct: 1119 LHEPQTYREASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGS 1178
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
+ERYKARLVAKGF+Q+YG+DYEETFAPVA++++VR L+A+A+AR+W + QMDV+NAFLNG
Sbjct: 1179 VERYKARLVAKGFTQEYGIDYEETFAPVARISSVRALLAVAAARQWDLFQMDVKNAFLNG 1238
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L E VYM PPPG+ +VC L++ALYGLKQAPRAWF KFS +I LG+ S +DSAL
Sbjct: 1239 DLSEAVYMQPPPGLSVESNKVCHLRRALYGLKQAPRAWFAKFSSTIFRLGYTASPYDSAL 1298
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
F++ T I+L LYVDDMIIT ND+ GI LK LS FEMKDLG L YFLG+E++ S
Sbjct: 1299 FLRRTDKDTILLLLYVDDMIITSNDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHST 1358
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G ++Q+KYA+ +L +A LTD+K VD+P+E+N + S G PL +P+LYR +VGSLVYL
Sbjct: 1359 DGLYITQAKYASDLLSQAGLTDSKNVDTPVELNAHLTPSGGKPLSNPSLYRRLVGSLVYL 1418
Query: 12 TITR 1
T+TR
Sbjct: 1419 TVTR 1422
Score = 87.0 bits (214), Expect = 5e-15
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = -2
Query: 906 EPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIE 727
E T + AL P WQ AM +L AL TW L LP K+ IG WVYKIK K++GSIE
Sbjct: 84 ESTLYSKVALTPEWQDAMLTKLQALKVNSTWSLTSLPPRKHLIGCEWVYKIKYKANGSIE 143
Query: 726 RYKARLVAKGFSQQYGLDYEETFAPVA 646
YKA LVAKGF+ Q +D+ + F P++
Sbjct: 144 TYKAYLVAKGFTHQEWVDFIDLFLPLS 170
>gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1103
Score = 374 bits (959), Expect = e-117
Identities = 193/355 (54%), Positives = 251/355 (70%), Gaps = 5/355 (1%)
Frame = -2
Query: 1050 TISSSPATVDPA----PRYPSRVRKS-TQLPDFVXXXXXXXXXXXXXSIHNLSEPTS*KE 886
T + PA DPA P P RVRK + L D+ +I + EP + +E
Sbjct: 622 TPAVDPAVQDPALPPPPGLPPRVRKPPSYLHDY----------HYFSTIMSHYEPQTYRE 671
Query: 885 EALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLV 706
+ DP W+++M EL AL T TWDLV P KN + +WV+K+KT SDGSIERYKARLV
Sbjct: 672 ASADPKWRESMQAELQALENTNTWDLVDHPPDKNLMSCKWVFKVKTYSDGSIERYKARLV 731
Query: 705 AKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMV 526
A+GF+Q+YG+DYEETFAPVA++T++RTL+AIA++++W I QMDV+NAFLNG+L EVYM
Sbjct: 732 ARGFTQEYGIDYEETFAPVARLTSLRTLLAIAASKKWFIDQMDVKNAFLNGDLDAEVYMQ 791
Query: 525 PPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGI 346
PPPG +VC+L+KALYGLKQAPR+WF KF +I LGF S +D+ALFI+ G
Sbjct: 792 PPPGYSCPPHKVCRLRKALYGLKQAPRSWFAKFHDTIAQLGFTSSTYDNALFIRRNDHGT 851
Query: 345 IVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSK 166
++L LYVDDMIITG+D +GI+ LK L+ FEMKDLGSL YFLGI++ G LSQ+K
Sbjct: 852 VILLLYVDDMIITGDDSNGISELKQFLNLHFEMKDLGSLSYFLGIQILSCDDGLFLSQAK 911
Query: 165 YATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
YA+ ++ RA LTD KT +P+E ++ DGTPL+DPTLYR +VGSL+YLT+TR
Sbjct: 912 YASDLISRAGLTDCKTESTPLETRAHFTPLDGTPLEDPTLYRQLVGSLIYLTVTR 966
>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
Length = 1385
Score = 376 bits (966), Expect = e-116
Identities = 182/302 (60%), Positives = 228/302 (75%)
Frame = -2
Query: 906 EPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIE 727
EP S ++ P WQ AMAEE++AL +T TWDLVP P I +WVYKIKT+SDGS+E
Sbjct: 879 EPVSYRDAVTHPEWQHAMAEEIAALERTGTWDLVPFPSHSRPIMCKWVYKIKTRSDGSLE 938
Query: 726 RYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNL 547
RYKARLVA+GF Q++G DY+ETFAPVA MTTVRTL+++AS R W +SQ+DV+NAFLNG L
Sbjct: 939 RYKARLVARGFQQEHGRDYDETFAPVAHMTTVRTLLSVASVRHWSVSQLDVKNAFLNGEL 998
Query: 546 QEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFI 367
+EEVYM PPPG G VC+L+++LY LKQAPRAWFE+FS + + GF SDHD ALF+
Sbjct: 999 REEVYMHPPPGYSVPEGMVCRLRRSLYDLKQAPRAWFERFSSVVTAAGFSASDHDPALFV 1058
Query: 366 KNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKG 187
++ G +L LYVDDMIITG+D + IA +K+ LS F M DLG LRYFLGIEV+ +P G
Sbjct: 1059 HTSSRGRTLLLLYVDDMIITGDDSEYIAFVKAHLSEQFLMSDLGPLRYFLGIEVTSTPDG 1118
Query: 186 YLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTI 7
+ +SQ KY +LD A LTD +TV++P+E+NV SDG PL DPT YR +VGSLVYL +
Sbjct: 1119 FFMSQEKYIQDLLDHASLTDQRTVETPMELNVHLRPSDGEPLSDPTRYRHLVGSLVYLAV 1178
Query: 6 TR 1
TR
Sbjct: 1179 TR 1180
>gb|KYP77409.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 492
Score = 354 bits (908), Expect = e-116
Identities = 172/285 (60%), Positives = 219/285 (76%)
Frame = -2
Query: 855 MAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGFSQQYGL 676
M EL AL T TWDLV P KN + +WV+K+KT SDGSIERYKARLVA+GF+Q+YG+
Sbjct: 1 MQAELQALENTNTWDLVDHPPDKNLMSCKWVFKVKTYSDGSIERYKARLVARGFTQEYGI 60
Query: 675 DYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPGVIHYRG 496
DYEETFAPVA++T++RTL+AIA++++W I QMDV+NAFLNG+L EVYM PPPG
Sbjct: 61 DYEETFAPVARLTSLRTLLAIAASKKWFIDQMDVKNAFLNGDLDAEVYMQPPPGYSCPPH 120
Query: 495 EVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLSLYVDDM 316
+VC+L+KALYGLKQAPR+WF KF +I LGF S +D+ALFI+ G ++L LYVDDM
Sbjct: 121 KVCRLRKALYGLKQAPRSWFAKFHDTIAQLGFTSSTYDNALFIRRNDHGTVILLLYVDDM 180
Query: 315 IITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSKYATGILDRAR 136
IITG+D +GI+ LK L+ FEMKDLGSL YFLGI++ G LSQ+KYA+ ++ RA
Sbjct: 181 IITGDDSNGISELKQFLNLHFEMKDLGSLSYFLGIQILSCDDGLFLSQAKYASDLISRAG 240
Query: 135 LTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
LTD KT +P+E ++ DGTPL+DPTLYR +VGSL+YLT+TR
Sbjct: 241 LTDCKTESTPLETRAHFTPLDGTPLEDPTLYRQLVGSLIYLTVTR 285
>ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
Length = 989
Score = 367 bits (942), Expect = e-116
Identities = 181/304 (59%), Positives = 237/304 (77%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
++EP+S KE ++ P WQ+AM +EL+AL +T TWD+VPLP G I +WV+K+KTKSDGS
Sbjct: 478 IAEPSSYKEASVIPEWQRAMTDELNALHRTCTWDVVPLPAGVVPITCKWVFKVKTKSDGS 537
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
IERYKARLVA+GF Q G+DY+ETFAPVA +TTVR L+A+A++ W ISQMDV+NAFL+G
Sbjct: 538 IERYKARLVARGFQQTQGIDYDETFAPVAHLTTVRALLAVAASSSWSISQMDVKNAFLHG 597
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L EEVYM PPPG+ G VC+L++ALYGLKQAPRAWFE+F I + GF SDHD AL
Sbjct: 598 DLHEEVYMHPPPGIEVPSGHVCRLRRALYGLKQAPRAWFERFVSVIKACGFYSSDHDPAL 657
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
FI ++ G +L LYVDDM+ITG+D D IA +K+ LS F+M DLG+L YFLGIEV +
Sbjct: 658 FIHVSSRGRTLLLLYVDDMLITGDDPDHIAHVKTYLSKEFQMSDLGALSYFLGIEVLQTQ 717
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G LSQ+KY +LDR+ L+DT+TV +P+++++ +DGTPL+DP+ YR +VGSLVYL
Sbjct: 718 NGIYLSQAKYIQDLLDRSGLSDTRTVATPMDLHLSLCPTDGTPLEDPSRYRHLVGSLVYL 777
Query: 12 TITR 1
T+TR
Sbjct: 778 TVTR 781
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 374 bits (960), Expect = e-114
Identities = 196/356 (55%), Positives = 253/356 (71%), Gaps = 6/356 (1%)
Frame = -2
Query: 1050 TISSSPATVD---PAPRYPSRVRKSTQLP---DFVXXXXXXXXXXXXXSIHNLSEPTS*K 889
T+ +VD PAPRY R R + + P DFV + + EP++ +
Sbjct: 718 TLEDPTCSVDDSSPAPRYNLRARDALRAPNRDDFV--------------VGVVFEPSTYQ 763
Query: 888 EEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARL 709
E + P W+ AM+EEL+AL +T TWD+VPLP I +WVYK+KTKSDG +ERYKARL
Sbjct: 764 EAIVLPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCKWVYKVKTKSDGQVERYKARL 823
Query: 708 VAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYM 529
VA+GF Q +G DY+ETFAPVA MTTVRTLIA+A+ R W ISQMDV+NAFL+G+L EEVYM
Sbjct: 824 VARGFQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTISQMDVKNAFLHGDLHEEVYM 883
Query: 528 VPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAG 349
PPPGV G V +L++ALYGLKQAPRAWF +FS +L+ GF SDHD ALFI ++ G
Sbjct: 884 HPPPGVEAPPGHVFRLRRALYGLKQAPRAWFARFSSVVLAAGFSPSDHDPALFIHTSSRG 943
Query: 348 IIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQS 169
+L LYVDDM+ITG+D++ IA +K +LS F M DLG L YFLGIEV+ + GY LSQ
Sbjct: 944 RTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGPLSYFLGIEVTSTVDGYYLSQH 1003
Query: 168 KYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
+Y +L ++ LTD++T +P+E++VR S+DGTPLDDP+ YR +VGSLVYLT+TR
Sbjct: 1004 RYIEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDDPSRYRHLVGSLVYLTVTR 1059
>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1204
Score = 367 bits (943), Expect = e-114
Identities = 180/304 (59%), Positives = 231/304 (75%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
L+EP S ++ + WQ AMAEEL+AL +T TWDLVPLP I +W+YK+KT+SDG+
Sbjct: 731 LAEPCSYRDAVVHQEWQHAMAEELAALERTGTWDLVPLPSHARPITCKWIYKVKTRSDGT 790
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
+ERYKARLVA+GF Q++G DY+ETFAPVA MTTVRTL+AIASAR +ISQ+DV+NAFLNG
Sbjct: 791 LERYKARLVARGFQQEHGRDYDETFAPVAHMTTVRTLLAIASARHCNISQLDVKNAFLNG 850
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
L EEVYM PP G + G VC+L+++LYGLKQAPRAWF++FS +L GF S HD AL
Sbjct: 851 ELHEEVYMRPPQGYLVPEGMVCRLRRSLYGLKQAPRAWFQRFSSVVLDAGFSASAHDPAL 910
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
F+ + +L LYVDDM+ITG+D + I +K+ LS F M DLG L YFLGIE+S +P
Sbjct: 911 FVHTSPRSRTILLLYVDDMLITGDDAEFITFVKARLSEQFLMTDLGPLCYFLGIEISSTP 970
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
+G+ SQ+KY +LDRA LTD +TV++P+E+N+ S++DG PL DPT YR IVGSLVYL
Sbjct: 971 EGFHFSQAKYIQDLLDRASLTDQRTVETPMELNLHLSATDGEPLADPTRYRHIVGSLVYL 1030
Query: 12 TITR 1
+TR
Sbjct: 1031 GVTR 1034
>emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group]
Length = 786
Score = 358 bits (918), Expect = e-114
Identities = 179/289 (61%), Positives = 219/289 (75%)
Frame = -2
Query: 867 WQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGFSQ 688
WQ AMAEEL+AL +T TWDLVPLP I +W+YKIKT+SDG++ERYKARLVA GF Q
Sbjct: 146 WQLAMAEELAALERTCTWDLVPLPSHARPITCKWIYKIKTRSDGTLERYKARLVACGFQQ 205
Query: 687 QYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPGVI 508
++G DY+ETFAPVA MTTVRTL+AIASAR W+ISQ+DV+NAFLNG L EEVYM P G
Sbjct: 206 EHGRDYDETFAPVAHMTTVRTLLAIASARHWNISQLDVKNAFLNGELHEEVYMRSPQGYS 265
Query: 507 HYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLSLY 328
G VC L+ +LYGLKQAPRAWF++FS +L GF S HD ALF+ + G VL LY
Sbjct: 266 VPEGMVCCLRCSLYGLKQAPRAWFQRFSSVVLEAGFSTSAHDPALFVHTSPRGCTVLLLY 325
Query: 327 VDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSKYATGIL 148
VDDM+ITG D + I +K+ L F M DLG LRYFL IE+S +P+G+ LSQ+KY +L
Sbjct: 326 VDDMLITGEDAEFITFVKARLGEQFLMTDLGPLRYFLCIEISSTPEGFHLSQAKYIQDLL 385
Query: 147 DRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
DRA LTD +TV++P+E+N+ S++DG PL DPT YR IVGSLVYL +TR
Sbjct: 386 DRASLTDQRTVETPMELNLHLSATDGEPLADPTRYRHIVGSLVYLGVTR 434
>ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502300 isoform X2 [Zea mays]
Length = 1180
Score = 364 bits (935), Expect = e-113
Identities = 181/304 (59%), Positives = 235/304 (77%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
++EP+S KE + P WQ AM +EL+AL +T TWD+VPLP G I +WV+K+KTKSDGS
Sbjct: 669 IAEPSSYKEASGIPEWQLAMTDELNALHRTCTWDVVPLPAGVVPITCKWVFKVKTKSDGS 728
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
IERYKARLVA+GF Q G+DY+ETFAPVA +TTVR L+A+A++ W ISQMDV+NAFL+G
Sbjct: 729 IERYKARLVARGFQQTQGIDYDETFAPVAHLTTVRALLAVAASSSWTISQMDVKNAFLHG 788
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+L EEVYM PPPG+ G VC+L++ALYGLKQAPRAWFE+F I + GF SDHD AL
Sbjct: 789 DLHEEVYMHPPPGIEVPSGHVCRLRRALYGLKQAPRAWFERFVSVIKACGFYSSDHDPAL 848
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
FI ++ G +L LYVDDM+ITG+D D IA +K+ LS F+M DLG+L YFLGIEV +
Sbjct: 849 FIHVSSRGRTLLLLYVDDMLITGDDPDHIAHVKASLSKEFQMSDLGALSYFLGIEVLQTQ 908
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G LSQ+KY +LDR+ L+DT+TV +P+++++ +DGTPL+DP+ YR +VGSLVYL
Sbjct: 909 NGIYLSQAKYIQDLLDRSGLSDTRTVATPMDLHLSLRPTDGTPLEDPSRYRHLVGSLVYL 968
Query: 12 TITR 1
T+TR
Sbjct: 969 TVTR 972
>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 358 bits (920), Expect = e-110
Identities = 177/304 (58%), Positives = 228/304 (75%)
Frame = -2
Query: 912 LSEPTS*KEEALDPLWQQAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGS 733
+ EP + +E W+ AM EELSAL T TWD+VPLP I +WV+K+KT+S+GS
Sbjct: 909 VQEPRTYQEAVTINEWKLAMNEELSALEHTGTWDVVPLPHHAVPITCKWVFKVKTRSNGS 968
Query: 732 IERYKARLVAKGFSQQYGLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNG 553
IERYKARLVA+GF Q+YG DY+ETFAPVA +TTVRTLIA+A+ R+W ISQMDV+NAFL+G
Sbjct: 969 IERYKARLVARGFQQEYGRDYDETFAPVAHITTVRTLIAVAATRQWEISQMDVKNAFLHG 1028
Query: 552 NLQEEVYMVPPPGVIHYRGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSAL 373
+LQEEVYM PPPG+ G V +L++ALYGLKQ+PRAWFE+FS +L GF S+HDSAL
Sbjct: 1029 DLQEEVYMQPPPGLTCPSGHVLRLRRALYGLKQSPRAWFERFSSVVLKAGFVASEHDSAL 1088
Query: 372 FIKNTAAGIIVLSLYVDDMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSP 193
FI ++ G +L LYVDDMIITG+D +A +K LS F M DLG L+YFLGIEV+ +P
Sbjct: 1089 FIHTSSRGRTILLLYVDDMIITGDDASHVAFVKQRLSEQFMMTDLGPLKYFLGIEVASTP 1148
Query: 192 KGYLLSQSKYATGILDRARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYL 13
G+ LSQ +Y +L R+ L+D KT +P+E++++ +DG PL DP+ YR IVGSLVYL
Sbjct: 1149 NGFHLSQHRYTLDLLSRSGLSDDKTAATPMELHLKIRPTDGNPLSDPSRYRHIVGSLVYL 1208
Query: 12 TITR 1
+TR
Sbjct: 1209 AVTR 1212
>gb|ADB85257.1| putative retrotransposon protein, partial [Phyllostachys edulis]
Length = 2039
Score = 361 bits (926), Expect = e-109
Identities = 190/347 (54%), Positives = 240/347 (69%)
Frame = -2
Query: 1041 SSPATVDPAPRYPSRVRKSTQLPDFVXXXXXXXXXXXXXSIHNLSEPTS*KEEALDPLWQ 862
SSPA +PRY R R+S +L + H EP S ++ P Q
Sbjct: 1080 SSPAG-SSSPRYALRNRQSIRL--------LACFGFAGAATH---EPVSYRDAVTHPECQ 1127
Query: 861 QAMAEELSALSKTETWDLVPLPQGKNAIGSRWVYKIKTKSDGSIERYKARLVAKGFSQQY 682
AMAEE++AL T TWDLVP P I +WVYKIKT+SDGS+ERYKARLVA+GF Q++
Sbjct: 1128 HAMAEEIAALEHTGTWDLVPFPSHSRPITCKWVYKIKTRSDGSLERYKARLVARGFQQEH 1187
Query: 681 GLDYEETFAPVAKMTTVRTLIAIASARRWHISQMDVRNAFLNGNLQEEVYMVPPPGVIHY 502
GLDY++TFAPVA MTTVRTL+++AS R W +SQ+DV+N+FLNG L+EEVYM PPPG
Sbjct: 1188 GLDYDKTFAPVAHMTTVRTLLSVASVRHWSVSQLDVKNSFLNGELREEVYMHPPPGYSVP 1247
Query: 501 RGEVCKLKKALYGLKQAPRAWFEKFSVSILSLGFRRSDHDSALFIKNTAAGIIVLSLYVD 322
G VC+L+ +LYGLKQAPRAWFE+FS + + GF SDHD LF+ ++ G +L LYVD
Sbjct: 1248 EGMVCRLRHSLYGLKQAPRAWFERFSFVVTAAGFSASDHDPTLFVHTSSRGRTLL-LYVD 1306
Query: 321 DMIITGNDVDGIALLKSELSSLFEMKDLGSLRYFLGIEVSWSPKGYLLSQSKYATGILDR 142
DMIITG+D I +K+ LS F M DLG LR FLGIEV+ +P G+ +SQ KY +LDR
Sbjct: 1307 DMIITGDDSKYIVFVKACLSEQFLMSDLGPLRCFLGIEVTSTPDGFFMSQEKYIQDLLDR 1366
Query: 141 ARLTDTKTVDSPIEVNVRYSSSDGTPLDDPTLYRAIVGSLVYLTITR 1
A LTD +TV++P+E+NV SDG PL DPT YR ++GSLVYL +TR
Sbjct: 1367 ASLTDQRTVETPMELNVHLRPSDGEPLSDPTRYRHLIGSLVYLAVTR 1413