BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00004112
         (306 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP03793.1| unnamed protein product [Coffea canephora]             64   9e-10
ref|XP_010036162.1| PREDICTED: pre-mRNA-processing factor 39 iso...    57   2e-07
ref|XP_010036158.1| PREDICTED: pre-mRNA-processing factor 39 iso...    57   2e-07
ref|XP_010036157.1| PREDICTED: pre-mRNA-processing factor 39 iso...    57   2e-07

>emb|CDP03793.1| unnamed protein product [Coffea canephora]
          Length = 439

 Score = 63.5 bits (153), Expect = 9e-10
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -1

Query: 231 FQCYACRCVLIFLTIYLSGKEGPSLHT*GASLFRQ 127
           FQCYACRCVLIFLTIYLSGK+GP  H  GASLF++
Sbjct: 18  FQCYACRCVLIFLTIYLSGKDGPFFHIRGASLFQR 52


>ref|XP_010036162.1| PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Eucalyptus
           grandis]
          Length = 723

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 QVCSYLPNHLSVRQGGSLPSYLRGLPFP--SAEYSLCIFLCTFCYFFHSHNDEFEFVDL* 41
           +V +YLPNHLSVRQGGSL SYLRGL  P  S  Y+    LC    F        +  ++ 
Sbjct: 433 KVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFLWRSMRRRD--NII 490

Query: 40  LYLCSQVVKLYER 2
           ++   QVVKLYER
Sbjct: 491 MFCGCQVVKLYER 503


>ref|XP_010036158.1| PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Eucalyptus
           grandis] gi|702492195|ref|XP_010036159.1| PREDICTED:
           pre-mRNA-processing factor 39 isoform X2 [Eucalyptus
           grandis]
          Length = 823

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 QVCSYLPNHLSVRQGGSLPSYLRGLPFP--SAEYSLCIFLCTFCYFFHSHNDEFEFVDL* 41
           +V +YLPNHLSVRQGGSL SYLRGL  P  S  Y+    LC    F        +  ++ 
Sbjct: 374 KVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFLWRSMRRRD--NII 431

Query: 40  LYLCSQVVKLYER 2
           ++   QVVKLYER
Sbjct: 432 MFCGCQVVKLYER 444


>ref|XP_010036157.1| PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Eucalyptus
           grandis]
          Length = 882

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 QVCSYLPNHLSVRQGGSLPSYLRGLPFP--SAEYSLCIFLCTFCYFFHSHNDEFEFVDL* 41
           +V +YLPNHLSVRQGGSL SYLRGL  P  S  Y+    LC    F        +  ++ 
Sbjct: 433 KVSTYLPNHLSVRQGGSLLSYLRGLSIPQRSTSYAYLPVLCVIGLFLWRSMRRRD--NII 490

Query: 40  LYLCSQVVKLYER 2
           ++   QVVKLYER
Sbjct: 491 MFCGCQVVKLYER 503