BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00003448
         (1892 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron sp...   845   0.0  
emb|CDO99162.1| unnamed protein product [Coffea canephora]            653   0.0  
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   630   0.0  
ref|XP_015887836.1| PREDICTED: CRM-domain containing factor CFM3...   625   0.0  
ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron sp...   624   0.0  
ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron sp...   624   0.0  
ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron sp...   624   0.0  
ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron sp...   624   0.0  
ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron sp...   620   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   620   0.0  
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...   614   0.0  
ref|XP_015088262.1| PREDICTED: chloroplastic group IIA intron sp...   618   0.0  
ref|XP_009767572.1| PREDICTED: chloroplastic group IIA intron sp...   614   0.0  
ref|XP_009767563.1| PREDICTED: chloroplastic group IIA intron sp...   614   0.0  
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp...   615   0.0  
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   614   0.0  
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...   599   0.0  
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp...   608   0.0  
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...   599   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   605   0.0  

>ref|XP_011091130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 886

 Score =  845 bits (2183), Expect = 0.0
 Identities = 432/583 (74%), Positives = 473/583 (81%), Gaps = 4/583 (0%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MAVMP+YQF+P+N+FLMD+FQSSVSK HVRT LQ FRYSSS     +F C I  +S+ + 
Sbjct: 1    MAVMPSYQFYPKNSFLMDTFQSSVSKFHVRTTLQFFRYSSSLPVKNRFFCVIDETSSRNS 60

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P +NPHKRFNLLP+NK    +++ E P SQ SN   ILS +SWL NW +T+KPN G++P
Sbjct: 61   VPQENPHKRFNLLPRNKKGGSSFSGEEPISQSSNSRVILSRSSWLANWDVTSKPNGGRRP 120

Query: 1377 QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMSRGIEKG 1198
            QAVVNYRN GDV                  +RIVEKLKKFGYIDD S+KNENM   IEKG
Sbjct: 121  QAVVNYRNRGDVSSSDSEEGTSTSSGGSTMQRIVEKLKKFGYIDDDSNKNENMGGVIEKG 180

Query: 1197 SIEDIFYVEEGLLPNTRGGFSEEFPFGDE----RSNGEVRFPWEKKAPTEQXXXXXXXXX 1030
            SIEDIFYVEEGLLPNTRGGFSEEFPFGDE    R NGEVRFPWEK A  EQ         
Sbjct: 181  SIEDIFYVEEGLLPNTRGGFSEEFPFGDENGVARGNGEVRFPWEKDALGEQKRSLDSRRS 240

Query: 1029 XXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEGAP 850
              LAELTLPE ELRRL N ALRIKNKT+IGGAGVTQQVV+ I EKWKT EVVRLK+EG P
Sbjct: 241  RSLAELTLPEPELRRLTNLALRIKNKTRIGGAGVTQQVVETIREKWKTSEVVRLKIEGPP 300

Query: 849  ALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKSPSAT 670
            ALNMRRMHEILERKTGGLVIWRSGTS++LYRGVTYED A KLKKRI R+NE+ HKS SAT
Sbjct: 301  ALNMRRMHEILERKTGGLVIWRSGTSLALYRGVTYEDSATKLKKRIFRRNELPHKSHSAT 360

Query: 669  NKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYADWP 490
            +KT QDSSE G L   + P  E VS +PD++ PETSSEVRYEDE++KLLDSLGPRY DWP
Sbjct: 361  DKTGQDSSESGVLPDREVPSPESVSLNPDDRDPETSSEVRYEDEVDKLLDSLGPRYTDWP 420

Query: 489  GEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGRSRQ 310
            G+ PLPVDADLLPG V GY+PPFRLLPYGVRSTLGMKEATALRRLAR LPPHFALGRSRQ
Sbjct: 421  GDDPLPVDADLLPGTVPGYRPPFRLLPYGVRSTLGMKEATALRRLARVLPPHFALGRSRQ 480

Query: 309  HQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYYRGK 130
            HQGLAAAMIKLWERSSI KIALKRGVQLTTSERMAEDLKRLTGG+LLSRNKDFLVYYRGK
Sbjct: 481  HQGLAAAMIKLWERSSIAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVYYRGK 540

Query: 129  DFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEET 1
            DFLSPDVAE LLEKERLAKALQDEEE+AR R   L+ P+ EET
Sbjct: 541  DFLSPDVAEALLEKERLAKALQDEEEQARLRALALIAPAVEET 583


>emb|CDO99162.1| unnamed protein product [Coffea canephora]
          Length = 871

 Score =  653 bits (1684), Expect = 0.0
 Identities = 362/583 (62%), Positives = 416/583 (71%), Gaps = 8/583 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P  QF+P+ T  MDSFQSS                      + F  A   + NSD 
Sbjct: 1    MALVPIQQFYPRATTFMDSFQSS---------------------KQTFFIANKSTMNSDS 39

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCG-KK 1381
               +NP K F+   + KN   ++A +  N+ + +    LS NSWLD W  T K +   K+
Sbjct: 40   IQRQNPQKSFDFDGRTKNKEWDFARKGSNASEVS----LSRNSWLDKWNETHKQDKKLKR 95

Query: 1380 PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMSRGIEK 1201
            PQ V+NYRN G+V                   RIVEKLKKFGY+D+V+DK     R IE+
Sbjct: 96   PQVVLNYRNNGEVSSSDCEENGGGTGTTME--RIVEKLKKFGYVDNVTDK-VGEDRVIER 152

Query: 1200 GSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEK-KAPTEQXXXXXXXX 1033
            GSIEDIFY+EEG+LPNTRGGFSE+ PFGDE    S+GEVRFPWEK +   ++        
Sbjct: 153  GSIEDIFYIEEGILPNTRGGFSEKSPFGDESVVGSDGEVRFPWEKDEVKDKERYSVRQKS 212

Query: 1032 XXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEGA 853
                AELTLPESELRRLRN ALRIKNKT+IGGAGVTQ+VV+ IH+KWK  EVVRLKVEGA
Sbjct: 213  KTSFAELTLPESELRRLRNMALRIKNKTRIGGAGVTQEVVEKIHQKWKGSEVVRLKVEGA 272

Query: 852  PALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKSPSA 673
            PALNMRRMHEILERKTGGLVIWRSGTSV+LYRGV YE P+++LKKRI ++NEI H    A
Sbjct: 273  PALNMRRMHEILERKTGGLVIWRSGTSVALYRGVGYEAPSERLKKRIYKENEIPHDQSLA 332

Query: 672  TNKTRQ-DSSEFGPLAGTDTPQ-VEPVSTDP-DNKYPETSSEVRYEDEIEKLLDSLGPRY 502
            T  +   D  E  P +   TP+ V   S D  +N+   +  EV+YEDE++KLL  LGPRY
Sbjct: 333  TTVSNSNDHLECNPCSNVHTPESVTSFSKDAGENRSIGSFPEVKYEDEVDKLLHGLGPRY 392

Query: 501  ADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALG 322
             DWPG GPLPVDADLLP V+ GYQ PFRLLPYGVRSTLGMKE TALRRLAR LPPHFALG
Sbjct: 393  TDWPGAGPLPVDADLLPSVIPGYQRPFRLLPYGVRSTLGMKEGTALRRLARSLPPHFALG 452

Query: 321  RSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVY 142
            RSRQHQGLA AMIKLWERSSI KIALKRGVQLTTSERMAED+K LTGGVLLSRNKDFLV+
Sbjct: 453  RSRQHQGLAVAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKNLTGGVLLSRNKDFLVF 512

Query: 141  YRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPS 13
            YRGK+FLSPDVAE LLEKERLAK LQDEEERAR + S LVTPS
Sbjct: 513  YRGKNFLSPDVAEALLEKERLAKTLQDEEERARLKASALVTPS 555


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  630 bits (1625), Expect = 0.0
 Identities = 342/586 (58%), Positives = 407/586 (69%), Gaps = 13/586 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNT---FLMDSFQSSVSKLHVRTALQLFRYSSSFSTN----KQFLCAIH 1579
            MA++P++QF+P+ T   FL  S      K +      +      F  N      F+   H
Sbjct: 1    MALVPSHQFYPRTTRLSFLRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPPKRSNFMITPH 60

Query: 1578 HSSNSDFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAK 1399
               N D    + P KR N + KN +   N  +  PN +  +  T +  +SWL  W  T  
Sbjct: 61   DVVNQDCIFRRTPSKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNGTRN 120

Query: 1398 PNCGKKPQAVVNYRNL-GDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNEN 1222
                KK Q V+NYRN  GD                    RIVEKLKKFGY D+ ++K + 
Sbjct: 121  DIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMD----RIVEKLKKFGYADEATEKEKK 176

Query: 1221 MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKK-APTEQX 1054
              R +EKGSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G VRFPWE+     E+ 
Sbjct: 177  EKRVVEKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVIAKDGVVRFPWERPLVKKEES 236

Query: 1053 XXXXXXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVV 874
                      LAELTLP SELRRL N ALRIKNK++I GAGVTQQVV+ I EKWKT EVV
Sbjct: 237  NSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVV 296

Query: 873  RLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEI 694
            RLKVEGAPALNM+RMHEILERKTGGLVIWRSGTSV+LYRGV+YE P++++KKRI+R++EI
Sbjct: 297  RLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEI 356

Query: 693  SHK-SPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDS 517
             HK SP    ++ Q+     P    D+ + + V T  +NK  +  SEV YEDE++KLLD 
Sbjct: 357  RHKNSPIVDGESNQN-----PRNDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDG 411

Query: 516  LGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPP 337
            LGPRY DWPG GPLPVDADLLPG+V GYQPPFR+LPYGVRSTL  +EATALRRLAR LPP
Sbjct: 412  LGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPP 471

Query: 336  HFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNK 157
            HFALGRSRQHQGLA+ M+KLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNK
Sbjct: 472  HFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNK 531

Query: 156  DFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            DFLV+YRGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S L+T
Sbjct: 532  DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLLLT 577


>ref|XP_015887836.1| PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 913

 Score =  625 bits (1613), Expect = 0.0
 Identities = 342/593 (57%), Positives = 412/593 (69%), Gaps = 15/593 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P+ QF+P   F  DSFQSS+SK H  T +Q FRY SS +  K    A   S  S  
Sbjct: 1    MALVPSRQFYPSTFF--DSFQSSISKFH-GTHIQFFRYGSSITFRKHTFFARQCSFTSTS 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
            TP +NP K++N   K++ +I       PN         LS +SW+D W    +    K P
Sbjct: 58   TPEQNPGKKYNFSRKSQTNI----QYKPNEN-------LSSSSWIDKWNEPRQQFRPKAP 106

Query: 1377 QAVVNYRNL---------GDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNE 1225
            +AV+NYR+           D                   ERIVEKLKKFGYIDD ++  E
Sbjct: 107  RAVLNYRSSESSNLQNSDSDGSDSSNGSNGGGGGGGSTMERIVEKLKKFGYIDDANENRE 166

Query: 1224 NMS-RGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQ 1057
              S R +EKGS+EDIFYVEEG+LPN+RGGFS E PFG E     +GEVRFPWEK    E+
Sbjct: 167  ERSERVVEKGSVEDIFYVEEGMLPNSRGGFSAESPFGVENVFGGDGEVRFPWEKPKRKEE 226

Query: 1056 XXXXXXXXXXXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTC 883
                          AELTLPESELRRLRN   + K+KT+IGGAGVT++VV+ IHE+WKT 
Sbjct: 227  KEDGSMRRKARSSLAELTLPESELRRLRNLTFQKKHKTRIGGAGVTREVVEMIHERWKTS 286

Query: 882  EVVRLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRK 703
            E+VRLK++G PALNM+RMHEILERKTGGLV+WRSGTS+SLYRGV+YE P+ +L KR   K
Sbjct: 287  EIVRLKIDGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRTYDK 346

Query: 702  NEISHKSPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLL 523
            +E+S   P+ ++K   D S +      D    +  ST  + K  E   EV+YEDE++KLL
Sbjct: 347  DEVSSTLPTVSDKPMGDPSRYASDRNVDMSLKKSESTSLEKKDTEYVPEVKYEDEVDKLL 406

Query: 522  DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 343
            D LGPRY DWPG  PLPVDADLLPG+V GYQPPFR+LPYGVR +LG++EAT+LRRLAR L
Sbjct: 407  DGLGPRYEDWPGCDPLPVDADLLPGIVPGYQPPFRVLPYGVRPSLGLREATSLRRLARVL 466

Query: 342  PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 163
            PPHFALGRSRQ QGLAAAMIKLWE+SSI KIALKRGVQLTTSERMAED+KRLTGGVLLSR
Sbjct: 467  PPHFALGRSRQLQGLAAAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKRLTGGVLLSR 526

Query: 162  NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEE 4
            NKDFLV+YRGK+FLSP+V E LLE+ERLAK+LQDEEE+AR R S +V P  +E
Sbjct: 527  NKDFLVFYRGKNFLSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPQIDE 579


>ref|XP_010278136.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X4 [Nelumbo nucifera]
          Length = 880

 Score =  624 bits (1608), Expect = 0.0
 Identities = 343/586 (58%), Positives = 408/586 (69%), Gaps = 9/586 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P+ QF+P  T  +DSFQSS+S+    + L + RY+SS    +      H++  SD 
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P KN  K  +   K  N    +A E P SQ  +     S NSW+  W  T + N   +P
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDF-SSNSWISKWNETHQQNLPNRP 116

Query: 1377 QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE--RIVEKLKKFGYIDDVSDKNENMSRGIE 1204
            Q V++YRN GDV                     +IVEKLK+FGY+DD++++ E +    E
Sbjct: 117  QTVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVP---E 173

Query: 1203 KGSIEDIFYVEEGLLPNTRGGFSEEFPFGDERS---NGEVRFPWEKKA--PTEQXXXXXX 1039
            KGS+EDIFYVEEG+LPNTRGGFS E P G E     +GEVRFPWEK++    E+      
Sbjct: 174  KGSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRS 233

Query: 1038 XXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVE 859
                 LAELTLPESELRRLRN A+R K KTKI GAGVTQ VVDAIHEKWKT E+VRLK E
Sbjct: 234  RSRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCE 293

Query: 858  GAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQK-LKKRILRKNEISHKS 682
            GA ALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE  + K  +KRI   NE SH S
Sbjct: 294  GASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNS 353

Query: 681  -PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPR 505
                T K  +D  E         PQ   V+T  + K  E+  E++YE E+++LLDSLGPR
Sbjct: 354  FEIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPR 413

Query: 504  YADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFAL 325
            Y DWPG GPLPVDADLLPGVV  Y+PPFR+LPYGVRSTLG+KE TALRRLAR +PPHFAL
Sbjct: 414  YTDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFAL 473

Query: 324  GRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLV 145
            GRSRQHQGLA AMIKLWERSSI KIALKRGVQLTTSERMAED+K+LTG  +LSRNKDF+V
Sbjct: 474  GRSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIV 533

Query: 144  YYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            +YRGK+FLSPDV E LLE+ERLAKALQDEEE+AR R S +V   +E
Sbjct: 534  FYRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSE 579


>ref|XP_010278134.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nelumbo nucifera]
          Length = 896

 Score =  624 bits (1608), Expect = 0.0
 Identities = 343/586 (58%), Positives = 408/586 (69%), Gaps = 9/586 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P+ QF+P  T  +DSFQSS+S+    + L + RY+SS    +      H++  SD 
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P KN  K  +   K  N    +A E P SQ  +     S NSW+  W  T + N   +P
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDF-SSNSWISKWNETHQQNLPNRP 116

Query: 1377 QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE--RIVEKLKKFGYIDDVSDKNENMSRGIE 1204
            Q V++YRN GDV                     +IVEKLK+FGY+DD++++ E +    E
Sbjct: 117  QTVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVP---E 173

Query: 1203 KGSIEDIFYVEEGLLPNTRGGFSEEFPFGDERS---NGEVRFPWEKKA--PTEQXXXXXX 1039
            KGS+EDIFYVEEG+LPNTRGGFS E P G E     +GEVRFPWEK++    E+      
Sbjct: 174  KGSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRS 233

Query: 1038 XXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVE 859
                 LAELTLPESELRRLRN A+R K KTKI GAGVTQ VVDAIHEKWKT E+VRLK E
Sbjct: 234  RSRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCE 293

Query: 858  GAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQK-LKKRILRKNEISHKS 682
            GA ALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE  + K  +KRI   NE SH S
Sbjct: 294  GASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNS 353

Query: 681  -PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPR 505
                T K  +D  E         PQ   V+T  + K  E+  E++YE E+++LLDSLGPR
Sbjct: 354  FEIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPR 413

Query: 504  YADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFAL 325
            Y DWPG GPLPVDADLLPGVV  Y+PPFR+LPYGVRSTLG+KE TALRRLAR +PPHFAL
Sbjct: 414  YTDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFAL 473

Query: 324  GRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLV 145
            GRSRQHQGLA AMIKLWERSSI KIALKRGVQLTTSERMAED+K+LTG  +LSRNKDF+V
Sbjct: 474  GRSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIV 533

Query: 144  YYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            +YRGK+FLSPDV E LLE+ERLAKALQDEEE+AR R S +V   +E
Sbjct: 534  FYRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSE 579


>ref|XP_010278131.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nelumbo nucifera]
            gi|720071686|ref|XP_010278132.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
            gi|720071690|ref|XP_010278133.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Nelumbo nucifera]
          Length = 914

 Score =  624 bits (1608), Expect = 0.0
 Identities = 343/586 (58%), Positives = 408/586 (69%), Gaps = 9/586 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P+ QF+P  T  +DSFQSS+S+    + L + RY+SS    +      H++  SD 
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P KN  K  +   K  N    +A E P SQ  +     S NSW+  W  T + N   +P
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDF-SSNSWISKWNETHQQNLPNRP 116

Query: 1377 QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE--RIVEKLKKFGYIDDVSDKNENMSRGIE 1204
            Q V++YRN GDV                     +IVEKLK+FGY+DD++++ E +    E
Sbjct: 117  QTVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVP---E 173

Query: 1203 KGSIEDIFYVEEGLLPNTRGGFSEEFPFGDERS---NGEVRFPWEKKA--PTEQXXXXXX 1039
            KGS+EDIFYVEEG+LPNTRGGFS E P G E     +GEVRFPWEK++    E+      
Sbjct: 174  KGSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRS 233

Query: 1038 XXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVE 859
                 LAELTLPESELRRLRN A+R K KTKI GAGVTQ VVDAIHEKWKT E+VRLK E
Sbjct: 234  RSRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCE 293

Query: 858  GAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQK-LKKRILRKNEISHKS 682
            GA ALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE  + K  +KRI   NE SH S
Sbjct: 294  GASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNS 353

Query: 681  -PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPR 505
                T K  +D  E         PQ   V+T  + K  E+  E++YE E+++LLDSLGPR
Sbjct: 354  FEIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPR 413

Query: 504  YADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFAL 325
            Y DWPG GPLPVDADLLPGVV  Y+PPFR+LPYGVRSTLG+KE TALRRLAR +PPHFAL
Sbjct: 414  YTDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFAL 473

Query: 324  GRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLV 145
            GRSRQHQGLA AMIKLWERSSI KIALKRGVQLTTSERMAED+K+LTG  +LSRNKDF+V
Sbjct: 474  GRSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIV 533

Query: 144  YYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            +YRGK+FLSPDV E LLE+ERLAKALQDEEE+AR R S +V   +E
Sbjct: 534  FYRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSE 579


>ref|XP_010278130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 919

 Score =  624 bits (1608), Expect = 0.0
 Identities = 343/586 (58%), Positives = 408/586 (69%), Gaps = 9/586 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MA++P+ QF+P  T  +DSFQSS+S+    + L + RY+SS    +      H++  SD 
Sbjct: 1    MALLPSCQFYP--TSFLDSFQSSLSRFQ-GSRLLILRYASSIRFKRHNFSVSHNNIISDS 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P KN  K  +   K  N    +A E P SQ  +     S NSW+  W  T + N   +P
Sbjct: 58   LPEKNQQKNSSFALKKNNDRRYFAEETPISQSISNGDF-SSNSWISKWNETHQQNLPNRP 116

Query: 1377 QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE--RIVEKLKKFGYIDDVSDKNENMSRGIE 1204
            Q V++YRN GDV                     +IVEKLK+FGY+DD++++ E +    E
Sbjct: 117  QTVLDYRNGGDVSSSEDDENNTSSSSGSSSTMDKIVEKLKRFGYVDDMNERRERVP---E 173

Query: 1203 KGSIEDIFYVEEGLLPNTRGGFSEEFPFGDERS---NGEVRFPWEKKA--PTEQXXXXXX 1039
            KGS+EDIFYVEEG+LPNTRGGFS E P G E     +GEVRFPWEK++    E+      
Sbjct: 174  KGSVEDIFYVEEGMLPNTRGGFSAESPLGIENGLGGSGEVRFPWEKRSMKEEEERNSFRS 233

Query: 1038 XXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVE 859
                 LAELTLPESELRRLRN A+R K KTKI GAGVTQ VVDAIHEKWKT E+VRLK E
Sbjct: 234  RSRTSLAELTLPESELRRLRNLAVRTKQKTKIKGAGVTQAVVDAIHEKWKTSEIVRLKCE 293

Query: 858  GAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQK-LKKRILRKNEISHKS 682
            GA ALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE  + K  +KRI   NE SH S
Sbjct: 294  GASALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVASVKDARKRIQNINENSHNS 353

Query: 681  -PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPR 505
                T K  +D  E         PQ   V+T  + K  E+  E++YE E+++LLDSLGPR
Sbjct: 354  FEIITAKINRDPKENSSYGAVQEPQTSMVATVEEKKDVESLPEIKYEHEMDELLDSLGPR 413

Query: 504  YADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFAL 325
            Y DWPG GPLPVDADLLPGVV  Y+PPFR+LPYGVRSTLG+KE TALRRLAR +PPHFAL
Sbjct: 414  YTDWPGNGPLPVDADLLPGVVLNYKPPFRILPYGVRSTLGIKETTALRRLARIIPPHFAL 473

Query: 324  GRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLV 145
            GRSRQHQGLA AMIKLWERSSI KIALKRGVQLTTSERMAED+K+LTG  +LSRNKDF+V
Sbjct: 474  GRSRQHQGLAMAMIKLWERSSIAKIALKRGVQLTTSERMAEDIKKLTGATILSRNKDFIV 533

Query: 144  YYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            +YRGK+FLSPDV E LLE+ERLAKALQDEEE+AR R S +V   +E
Sbjct: 534  FYRGKNFLSPDVTEALLERERLAKALQDEEEQARLRASSMVISVSE 579


>ref|XP_009614939.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 856

 Score =  620 bits (1599), Expect = 0.0
 Identities = 338/580 (58%), Positives = 403/580 (69%), Gaps = 7/580 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS-NSD 1561
            MA++P++QF+P+ T                  L   RY+S     K     +H +  N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFLRYNSIIPFKKSNFHTLHDNIVNQD 43

Query: 1560 FTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKK 1381
                K P K  N + KNK+   N +   P +  SN  +     SWL  W  T      KK
Sbjct: 44   CIFKKTPPKISNFVLKNKSKTWNLS---PKASASNLCS-----SWLGKWNETHNEIKLKK 95

Query: 1380 PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMSRGIEK 1201
            PQ V++YRN GD                    RIVEKLKKFGY+D+   K++ + R +EK
Sbjct: 96   PQIVLSYRNNGDTSGSDYEESSGGGSSTMD--RIVEKLKKFGYVDEAKQKDKKVIRDVEK 153

Query: 1200 GSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXXXXXXXXX 1030
            GSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G V+FPWEK    E+         
Sbjct: 154  GSIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGINSMSSR 213

Query: 1029 XXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEG 856
                 AELTLP SELRRL N ALRIKNKT+I GAGVTQQVV+ I EKW T EVVRLKVEG
Sbjct: 214  SRTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEG 273

Query: 855  APALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHK-SP 679
            APALNM+RMHEILERKTGGLVIWRSG+SV+LYRGV+YE P++++KKRI+R++EI HK SP
Sbjct: 274  APALNMKRMHEILERKTGGLVIWRSGSSVALYRGVSYETPSERMKKRIMRRDEIRHKNSP 333

Query: 678  SATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYA 499
               +++ Q+ SE  P +  +  + E  +T  +N       EV YEDE++KLLD LGPRY 
Sbjct: 334  IVDDESNQNPSETSPRSDMNPLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYT 393

Query: 498  DWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGR 319
            DWPG  PLP+DADLLPG+V GYQPP+RLLPYG+RSTLG KEATALRRLAR LPPHFALGR
Sbjct: 394  DWPGAEPLPLDADLLPGLVPGYQPPYRLLPYGLRSTLGTKEATALRRLARILPPHFALGR 453

Query: 318  SRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYY 139
            SRQHQGLA+AMIKLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNKDFLV+Y
Sbjct: 454  SRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFY 513

Query: 138  RGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            RGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S  +T
Sbjct: 514  RGKDFLSPEVAEALLEKERLAKTLQDEEEQARLRASVSLT 553


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  620 bits (1599), Expect = 0.0
 Identities = 339/586 (57%), Positives = 403/586 (68%), Gaps = 13/586 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNT---FLMDSFQSSVSKLHVRTALQLFRYSSSFSTN----KQFLCAIH 1579
            MA++P++QF+P+ T   F   S      K +      +      F  N      F+   H
Sbjct: 1    MALVPSHQFYPRTTRLSFFRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPSKRSNFVVTPH 60

Query: 1578 HSSNSDFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAK 1399
               N D    + P KR N + KN +   N  +  PN +  +  T +  +SWL  W  T  
Sbjct: 61   DVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNETRN 120

Query: 1398 PNCGKKPQAVVNYRNL-GDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNEN 1222
                KK Q V+NYRN  GD                    RIVEKLKKFGY D+ ++K + 
Sbjct: 121  DIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMD----RIVEKLKKFGYADEATEKEKR 176

Query: 1221 MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKK-APTEQX 1054
              R +EKGSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G V FPWEK     E+ 
Sbjct: 177  EKRVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKDGVVGFPWEKPLVKKEES 236

Query: 1053 XXXXXXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVV 874
                      LAELTLP SELRRL N ALRIKNK++I GAGVTQQVV+ I EKWKT EVV
Sbjct: 237  NSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVV 296

Query: 873  RLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEI 694
            RLKVEGAPALNM+RMHEILERKTGGLVIWRSGTSV+LYRGV+YE P++++KKRI+R++EI
Sbjct: 297  RLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEI 356

Query: 693  SHK-SPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDS 517
              K SP    ++ Q+S         D+ + + V T  +NK  +  SEV YEDE++KLLD 
Sbjct: 357  RQKNSPIVDGESNQNSRN-----DVDSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDG 411

Query: 516  LGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPP 337
            LGPRY DWPG GPLPVDADLLPG+V GYQPPFR+LPYGVRSTL  +EATALRRLAR LPP
Sbjct: 412  LGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPP 471

Query: 336  HFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNK 157
            HFALGRSRQHQGLA+ M+KLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNK
Sbjct: 472  HFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNK 531

Query: 156  DFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            DFLV+YRGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S  +T
Sbjct: 532  DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLT 577


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score =  614 bits (1584), Expect = 0.0
 Identities = 341/585 (58%), Positives = 403/585 (68%), Gaps = 8/585 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            MAV+P YQF+P+    + S QSSVS   +R  LQL  + SS         A   +S   F
Sbjct: 1    MAVVPGYQFYPKTASFVHSLQSSVSDFQLRR-LQLISFCSS---------ARPSASRGRF 50

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWT-ITAKPNCGKK 1381
             P +          + ++   N AS    +     ++     SW+D W  +    +  +K
Sbjct: 51   NPSRG---------RKRDGGRNLASGTLVADGRGASS-----SWMDFWNAVPGTQHVNRK 96

Query: 1380 PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDD--VSDKNENMSRGI 1207
            PQAVV+YRN  DV                   RIV KLKKFGY+DD   +D+NE   + +
Sbjct: 97   PQAVVDYRNADDVSDAEEGTSTSTGVSTMQ--RIVAKLKKFGYLDDDAAADENEAGRQIV 154

Query: 1206 EKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDE----RSNGEVRFPWEKKA-PTEQXXXXX 1042
            EKGS+EDIF VEEGLLPN+RGG S EFPFGDE    + +  VRFPWEKK  P  Q     
Sbjct: 155  EKGSVEDIFSVEEGLLPNSRGGISHEFPFGDEIVAVKGDVRVRFPWEKKNDPNVQKSSLD 214

Query: 1041 XXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKV 862
                  LAE TLPESE+ RLRN ALR KNKT+I GAGVTQ++V+AIHEKWKT EVVRLK+
Sbjct: 215  SRKARSLAESTLPESEVTRLRNLALRTKNKTRIKGAGVTQEIVEAIHEKWKTAEVVRLKI 274

Query: 861  EGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKS 682
            EG  ALNM+RMHEILERKTGGLV+WRSG+SV+LYRGV +ED ++KL KRI   N    +S
Sbjct: 275  EGPSALNMKRMHEILERKTGGLVVWRSGSSVALYRGVKFEDTSRKLNKRITGNNGAPRES 334

Query: 681  PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRY 502
              +  +  Q SSE     G         + DPD K  +T+S V+YEDE+EKLL+SLGPRY
Sbjct: 335  YRSLERITQGSSELSDDGGKPMEDDASFNGDPDRKIIQTTSYVKYEDEVEKLLESLGPRY 394

Query: 501  ADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALG 322
             DWPG+GPLPVDADLLPG + GYQPPFRLLPYGVRSTLG+KEAT LRR+ARGLPPHFALG
Sbjct: 395  EDWPGDGPLPVDADLLPGAIPGYQPPFRLLPYGVRSTLGIKEATTLRRIARGLPPHFALG 454

Query: 321  RSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVY 142
            RSR HQGLAAAMIK+WERSSI KIALKRGVQLTTSE +AEDLKRLTGG+LLSRNK++LV+
Sbjct: 455  RSRNHQGLAAAMIKVWERSSIAKIALKRGVQLTTSEWIAEDLKRLTGGMLLSRNKEYLVF 514

Query: 141  YRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            YRGKDFLSPDVAE LLEKERLAK LQDEEERAR R S  V P+A+
Sbjct: 515  YRGKDFLSPDVAEALLEKERLAKTLQDEEERARLRASAFVAPTAD 559


>ref|XP_015088262.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum pennellii]
          Length = 883

 Score =  618 bits (1594), Expect = 0.0
 Identities = 341/589 (57%), Positives = 410/589 (69%), Gaps = 16/589 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQ----------LFRYSSSFSTNKQFLC 1588
            MA++P++QF+P+ T L   F+ S SK   +              +F+ + S  +N  F+ 
Sbjct: 1    MALVPSHQFYPRTTRL-SFFRYSSSKPFKKPIFHAPHDIVNQDCIFKQNPSKRSN--FVV 57

Query: 1587 AIHHSSNSDFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTI 1408
              H   N D    + P KR N + KN +   N  +  PN +  +  T +  +SWL  W  
Sbjct: 58   TPHDVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNE 117

Query: 1407 TAKPNCGKKPQAVVNYRNL-GDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDK 1231
            T      KK Q V+NYRN  GD                    RIVEKLKKFGY D+ ++K
Sbjct: 118  TRNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMD----RIVEKLKKFGYADEATEK 173

Query: 1230 NENMSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKK-APT 1063
             +   R +EKGSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G V FPWEK     
Sbjct: 174  EKREKRVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKDGVVGFPWEKPLVKK 233

Query: 1062 EQXXXXXXXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTC 883
            E+           LAELTLP SELRRL N ALRIKNK++I GAGVTQQVV+ I EKWKT 
Sbjct: 234  EESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTS 293

Query: 882  EVVRLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRK 703
            EVVRLKVEGAPALNM+RMHEILERKTGGLVIWRSGTSV+LYRGV+YE P++++KKRI+R+
Sbjct: 294  EVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRR 353

Query: 702  NEISHK-SPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKL 526
            +EI  K SP+   ++ Q+     P    D+ + + V T  +NK  +  SEV YEDE++KL
Sbjct: 354  DEIRQKNSPTVDGESNQN-----PRNDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKL 408

Query: 525  LDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARG 346
            LD LGPRY DWPG GPLPVDADLLPG+V  YQPPFR+LPYGVRSTL  +EATALRRLAR 
Sbjct: 409  LDGLGPRYTDWPGSGPLPVDADLLPGIVPEYQPPFRILPYGVRSTLAAREATALRRLARV 468

Query: 345  LPPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLS 166
            LPPHFALGRSRQHQGLA+ M+KLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLS
Sbjct: 469  LPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLS 528

Query: 165  RNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            RNKDFLV+YRGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S  +T
Sbjct: 529  RNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLT 577


>ref|XP_009767572.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nicotiana sylvestris]
          Length = 856

 Score =  614 bits (1583), Expect = 0.0
 Identities = 339/580 (58%), Positives = 401/580 (69%), Gaps = 7/580 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS-NSD 1561
            MA++P++QF+P+ T                  L  FRY+S     K      H++  N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYNSIIPFKKPNFHTTHNNIVNQD 43

Query: 1560 FTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKK 1381
                + P KR N + KNK       ++  NS+    AT +  +SWL  W  T       K
Sbjct: 44   CIFKQTPQKRSNFVLKNK-------AKTWNSKPKVSATSVFSSSWLGKWNETHNEIKLNK 96

Query: 1380 PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMSRGIEK 1201
            PQ V++YRN GD                    RIVEKLKKFGY+D+   K++ + R +EK
Sbjct: 97   PQIVLSYRNNGDTSGSDCEESSSGGSSTMD--RIVEKLKKFGYVDEAKQKDKKVIRDVEK 154

Query: 1200 GSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXXXXXXXXX 1030
            GSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G V+FPWEK    E+         
Sbjct: 155  GSIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGGNSMSSR 214

Query: 1029 XXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEG 856
                 AELTLP SELRRL N ALRIKNKT+I GAGVTQQVV+ I EKW T EVVRLKVEG
Sbjct: 215  SRTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEG 274

Query: 855  APALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHK-SP 679
            APALNM+RMHEILERKTGGLVIWRSGTSV+LYRGV+YE P++++KKRI+R NEI  K SP
Sbjct: 275  APALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMR-NEIRRKNSP 333

Query: 678  SATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYA 499
               +++ Q+ SE  P    ++ + E  +T  +N       EV YEDE++KLLD LGPRY 
Sbjct: 334  IVDDESNQNPSESSPSNYVNSLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYT 393

Query: 498  DWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGR 319
            DWPG  PLPVDADLLPG+V GYQPP+RLLPYGVRSTLG KEATALRRLAR LPPHFALGR
Sbjct: 394  DWPGAEPLPVDADLLPGIVPGYQPPYRLLPYGVRSTLGTKEATALRRLARILPPHFALGR 453

Query: 318  SRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYY 139
            SRQHQGLA+AMIKLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNKDFLV+Y
Sbjct: 454  SRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFY 513

Query: 138  RGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            RGKDFLSP+VAE LLEKE LAK LQDEEE+AR   S  +T
Sbjct: 514  RGKDFLSPEVAEALLEKESLAKMLQDEEEQARLGASVSLT 553


>ref|XP_009767563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 859

 Score =  614 bits (1583), Expect = 0.0
 Identities = 339/580 (58%), Positives = 401/580 (69%), Gaps = 7/580 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS-NSD 1561
            MA++P++QF+P+ T                  L  FRY+S     K      H++  N D
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYNSIIPFKKPNFHTTHNNIVNQD 43

Query: 1560 FTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKK 1381
                + P KR N + KNK       ++  NS+    AT +  +SWL  W  T       K
Sbjct: 44   CIFKQTPQKRSNFVLKNK-------AKTWNSKPKVSATSVFSSSWLGKWNETHNEIKLNK 96

Query: 1380 PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMSRGIEK 1201
            PQ V++YRN GD                    RIVEKLKKFGY+D+   K++ + R +EK
Sbjct: 97   PQIVLSYRNNGDTSGSDCEESSSGGSSTMD--RIVEKLKKFGYVDEAKQKDKKVIRDVEK 154

Query: 1200 GSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXXXXXXXXX 1030
            GSIEDIF+VEEG+LPN RGGFSEE PFGDE     +G V+FPWEK    E+         
Sbjct: 155  GSIEDIFFVEEGILPNVRGGFSEESPFGDENVFVKDGVVKFPWEKPLVKEEEGGNSMSSR 214

Query: 1029 XXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEG 856
                 AELTLP SELRRL N ALRIKNKT+I GAGVTQQVV+ I EKW T EVVRLKVEG
Sbjct: 215  SRTHLAELTLPASELRRLTNLALRIKNKTRISGAGVTQQVVETIREKWNTSEVVRLKVEG 274

Query: 855  APALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHK-SP 679
            APALNM+RMHEILERKTGGLVIWRSGTSV+LYRGV+YE P++++KKRI+R NEI  K SP
Sbjct: 275  APALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMR-NEIRRKNSP 333

Query: 678  SATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYA 499
               +++ Q+ SE  P    ++ + E  +T  +N       EV YEDE++KLLD LGPRY 
Sbjct: 334  IVDDESNQNPSESSPSNYVNSLRPESANTSEENGNIVRQPEVNYEDEVDKLLDGLGPRYT 393

Query: 498  DWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGR 319
            DWPG  PLPVDADLLPG+V GYQPP+RLLPYGVRSTLG KEATALRRLAR LPPHFALGR
Sbjct: 394  DWPGAEPLPVDADLLPGIVPGYQPPYRLLPYGVRSTLGTKEATALRRLARILPPHFALGR 453

Query: 318  SRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYY 139
            SRQHQGLA+AMIKLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNKDFLV+Y
Sbjct: 454  SRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFY 513

Query: 138  RGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVT 19
            RGKDFLSP+VAE LLEKE LAK LQDEEE+AR   S  +T
Sbjct: 514  RGKDFLSPEVAEALLEKESLAKMLQDEEEQARLGASVSLT 553


>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 899

 Score =  615 bits (1585), Expect = 0.0
 Identities = 337/589 (57%), Positives = 412/589 (69%), Gaps = 12/589 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            M ++P+ Q +P  T L DSFQSS SK H    + LFR  SS    K    A H++ +S  
Sbjct: 1    MTLVPSRQLYP--TSLFDSFQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTL 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P +NP ++ N + KN+  I  Y        K N     S +SW+D W  + K NC K P
Sbjct: 58   NPEQNPLRKSNFVRKNQ-PISQY------KPKKN----FSSSSWIDKWNESHKHNCPKPP 106

Query: 1377 QAVVNYR-----NLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSD-KNENMS 1216
            +AV++Y+     NL                     E+IVEKLKKFGY+DD ++ K E   
Sbjct: 107  RAVLDYQSSESGNLSGSGYAEGDSGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRD 166

Query: 1215 RGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTE--QXX 1051
            R +EKGS+EDIFYVEEG LPN+RGGFSEE P G E     +G+VRFPWEK    E  +  
Sbjct: 167  RVMEKGSVEDIFYVEEGKLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEG 226

Query: 1050 XXXXXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVR 871
                     LAELTLPESELRRL N   + K+KT+IGG GVTQ VV+ IHE+WKT E+VR
Sbjct: 227  SVRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVR 286

Query: 870  LKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEIS 691
            LK+EG PALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE P+ KL K+I +KN+ S
Sbjct: 287  LKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKQIYKKNDTS 346

Query: 690  HKS-PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSL 514
                P+  +K+  D +E    +   TP+ +  +T  + +  E  +EV+YEDE++KLLDSL
Sbjct: 347  SAPFPTVADKSVGDFAELASYSNVKTPKEKLENTSQEKEDTEQLAEVKYEDEVDKLLDSL 406

Query: 513  GPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPH 334
            GPR+ DWPG  PLPVDAD+LPG+V GYQPPFR+LPYGVRSTLG+KEAT+LRRLAR LPPH
Sbjct: 407  GPRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPH 466

Query: 333  FALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKD 154
            FALGRSRQ QGLA AM KLWE+S I KIALKRGVQLTTSERMAED+KRLTGGV+LSRNKD
Sbjct: 467  FALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKD 526

Query: 153  FLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            FLV+YRGK+FLSPDV E LLE+ERLAK+LQDEEE+AR R S ++ P+ E
Sbjct: 527  FLVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMIIPNVE 575


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  614 bits (1584), Expect = 0.0
 Identities = 338/589 (57%), Positives = 411/589 (69%), Gaps = 12/589 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSDF 1558
            M ++P+ Q +P  T L DSFQSS SK H    + LFR  SS    K    A H++ +S  
Sbjct: 1    MTLVPSRQLYP--TSLFDSFQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTL 57

Query: 1557 TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 1378
             P +NP ++ N + KN+  I  Y        K N     S +SW+D W  + K N  K P
Sbjct: 58   NPEQNPLRKSNFVRKNQ-PISQY------KPKKN----FSSSSWIDKWNESHKHNRPKPP 106

Query: 1377 QAVVNYR-----NLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSD-KNENMS 1216
            +AV++Y+     NL                     E+IVEKLKKFGY+DD ++ K E   
Sbjct: 107  RAVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRD 166

Query: 1215 RGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTE--QXX 1051
              IEKGS+EDIFY+EEG+LPN+RGGFSEE P G E     +G+VRFPWEK    E  +  
Sbjct: 167  SVIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEG 226

Query: 1050 XXXXXXXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVR 871
                     LAELTLPESELRRL N   + K+KT+IGG GVTQ VV+ IHE+WKT E+VR
Sbjct: 227  SVRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVR 286

Query: 870  LKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEIS 691
            LK+EG PALNM+RMHEILERKTGGLVIWRSGTS+SLYRGV+YE P+ KL KRI +KN+IS
Sbjct: 287  LKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDIS 346

Query: 690  HKS-PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSL 514
                P+  +K+  D +E    +   TPQ +  +T  + +  E  +EV+YEDE++KLLDSL
Sbjct: 347  SAPLPTVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSL 406

Query: 513  GPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPH 334
            GPR+ DWPG  PLPVDAD+LPG+V GYQPPFR+LPYGVRSTLG+KEAT+LRRLAR LPPH
Sbjct: 407  GPRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPH 466

Query: 333  FALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKD 154
            FALGRSRQ QGLA AM KLWE+S I KIALKRGVQLTTSERMAED+KRLTGGV+LSRNKD
Sbjct: 467  FALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKD 526

Query: 153  FLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            FLV+YRGK+FLSPDV E LLE+ERLAK+LQDEEE+AR R S +  P+ E
Sbjct: 527  FLVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVE 575


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
            gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
            4 [Theobroma cacao]
          Length = 645

 Score =  599 bits (1545), Expect = 0.0
 Identities = 332/591 (56%), Positives = 399/591 (67%), Gaps = 14/591 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTF---LMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSN 1567
            M ++P  QFHP  T     +DSFQ+ +SK H          SS+F      L A +++  
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 1566 SDFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCG 1387
            S+   H+ P  +    P    +                      ++WLD+W  T K    
Sbjct: 61   SNSLFHQYPKSKTKAFPTKDPTF--------------------RSNWLDSWNKTHKGFGP 100

Query: 1386 KKPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE-RIVEKLKKFGYIDDVSDKNEN---- 1222
            K P+ V NYR  GDV                    +IVEKLKKFGYI + +++ E     
Sbjct: 101  KPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEE 160

Query: 1221 MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXX 1051
              R IE+GSIEDIFYVEEG+LPN RGGFS+E P G E    S+GEVRFPWEK+   E+  
Sbjct: 161  PKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEG 220

Query: 1050 XXXXXXXXXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEV 877
                        AELTLPESELRRLRN   R K+K +I GAGVTQ+VVD IHEKWKT E+
Sbjct: 221  GWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEI 280

Query: 876  VRLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNE 697
            VRLK+EGAPALNM+RMHEILERKTGGLVIWRSGTSVSLYRGV+YE P+  L KRI ++NE
Sbjct: 281  VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNE 340

Query: 696  -ISHKSPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLD 520
              ++  PS ++KT+ D S  G      +PQ    +    NK  E+  E+RYEDE++KLL+
Sbjct: 341  TFTYALPSVSDKTK-DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLE 399

Query: 519  SLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLP 340
             LGPRY DWPG  PLPVDADLLPG+VAGYQPPFR+LPYGVRS+LG+KEAT+LRRLAR LP
Sbjct: 400  GLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLP 459

Query: 339  PHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRN 160
            PHFA+GRSRQ QGLA AMIKLWE+SSI KIALKRGVQLTTSERMAED+K+LTGG+LLSRN
Sbjct: 460  PHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRN 519

Query: 159  KDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            KDFLV+YRGK+FLS DVAE L+E+ERLAK+LQDEEE+AR R S  + PS E
Sbjct: 520  KDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTE 570


>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Malus domestica]
          Length = 894

 Score =  608 bits (1568), Expect = 0.0
 Identities = 337/588 (57%), Positives = 412/588 (70%), Gaps = 10/588 (1%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSSFST--NKQFLCAIHHSSNS 1564
            M ++P+ Q +P N F  DSFQ S+SK +    +Q FRY    ST  NK    A H   +S
Sbjct: 1    MTLVPSLQLYPTNLF--DSFQRSLSKFN-GPHIQFFRYGHGSSTPFNKHTFYATHSIISS 57

Query: 1563 DFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGK 1384
               P +NP ++ N + +N++    Y  +P  +        L  +SW+D W  + K N  K
Sbjct: 58   ---PDQNPVRKSNFVGRNRSI---YQYKPXRN--------LCTSSWIDKWNESHKRNRLK 103

Query: 1383 KPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSD-KNENMSRGI 1207
             PQAV++Y++                      ++IVEKL KFGY+DD  + K E   R I
Sbjct: 104  PPQAVLDYQS-----SESGNLSGSGNGGGSTMQKIVEKLTKFGYVDDSXEGKGEARERVI 158

Query: 1206 EKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXXXXXXX 1036
            EKGS+EDIFYVEEG+LPN+RGGFS E P G E    S+G+VRFPWEK A  E+       
Sbjct: 159  EKGSVEDIFYVEEGMLPNSRGGFSAESPLGIENVFGSDGKVRFPWEKPAEEEKQDZGSVR 218

Query: 1035 XXXXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKV 862
                   AELTLPESELRRLRN   + K+KTKIGGAGVTQ VVD IHE+WKT E+VRLKV
Sbjct: 219  RKSRTSVAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVDMIHERWKTSEIVRLKV 278

Query: 861  EGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKS 682
            EG PALNM+RMHEILERKTGGLV+WRSGTS+SLYRGV+YE P+ +L KRI +K EIS  +
Sbjct: 279  EGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKRIYKKKEISSST 338

Query: 681  --PSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGP 508
              P+  +K+  D  E       +TPQ +P ST  + K  +   EV+YEDE++KLLDSLGP
Sbjct: 339  SFPNVADKSLGDFVELASYGNVNTPQEKPESTSLEKKDTDQLPEVKYEDEVDKLLDSLGP 398

Query: 507  RYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFA 328
            R+ DWPG  PLPVDAD+LPG+V GY+PPFR+LPYGV S+LG++EAT+LRRLAR LPPHFA
Sbjct: 399  RFKDWPGCDPLPVDADMLPGLVPGYEPPFRVLPYGVXSSLGLQEATSLRRLARVLPPHFA 458

Query: 327  LGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFL 148
            LGRSRQ QGLA AM KLWERS I KIALKRGVQLTTSERMAED+KRLTGGVLLSRNKDFL
Sbjct: 459  LGRSRQLQGLAVAMAKLWERSLIAKIALKRGVQLTTSERMAEDIKRLTGGVLLSRNKDFL 518

Query: 147  VYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEE 4
            V+YRGK+FLSP+V E LLE+ERLAK+LQDEEE+AR R S +V P+ E+
Sbjct: 519  VFYRGKNFLSPEVTEALLERERLAKSLQDEEEQARLRASAMVIPNVEQ 566


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
            gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
            2 [Theobroma cacao]
          Length = 685

 Score =  599 bits (1545), Expect = 0.0
 Identities = 332/591 (56%), Positives = 399/591 (67%), Gaps = 14/591 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTF---LMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSN 1567
            M ++P  QFHP  T     +DSFQ+ +SK H          SS+F      L A +++  
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 1566 SDFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCG 1387
            S+   H+ P  +    P    +                      ++WLD+W  T K    
Sbjct: 61   SNSLFHQYPKSKTKAFPTKDPTF--------------------RSNWLDSWNKTHKGFGP 100

Query: 1386 KKPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXE-RIVEKLKKFGYIDDVSDKNEN---- 1222
            K P+ V NYR  GDV                    +IVEKLKKFGYI + +++ E     
Sbjct: 101  KPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEE 160

Query: 1221 MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDER---SNGEVRFPWEKKAPTEQXX 1051
              R IE+GSIEDIFYVEEG+LPN RGGFS+E P G E    S+GEVRFPWEK+   E+  
Sbjct: 161  PKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEG 220

Query: 1050 XXXXXXXXXL--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEV 877
                        AELTLPESELRRLRN   R K+K +I GAGVTQ+VVD IHEKWKT E+
Sbjct: 221  GWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEI 280

Query: 876  VRLKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNE 697
            VRLK+EGAPALNM+RMHEILERKTGGLVIWRSGTSVSLYRGV+YE P+  L KRI ++NE
Sbjct: 281  VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNE 340

Query: 696  -ISHKSPSATNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLLD 520
              ++  PS ++KT+ D S  G      +PQ    +    NK  E+  E+RYEDE++KLL+
Sbjct: 341  TFTYALPSVSDKTK-DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLE 399

Query: 519  SLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLP 340
             LGPRY DWPG  PLPVDADLLPG+VAGYQPPFR+LPYGVRS+LG+KEAT+LRRLAR LP
Sbjct: 400  GLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLP 459

Query: 339  PHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRN 160
            PHFA+GRSRQ QGLA AMIKLWE+SSI KIALKRGVQLTTSERMAED+K+LTGG+LLSRN
Sbjct: 460  PHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRN 519

Query: 159  KDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAE 7
            KDFLV+YRGK+FLS DVAE L+E+ERLAK+LQDEEE+AR R S  + PS E
Sbjct: 520  KDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTE 570


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  605 bits (1561), Expect = 0.0
 Identities = 343/590 (58%), Positives = 404/590 (68%), Gaps = 15/590 (2%)
 Frame = -3

Query: 1737 MAVMPNYQFHPQNTFLMDSFQSSVSKLHVRTALQLFRYSSS--FSTNKQFLCAIHHSSNS 1564
            MA++P+ QF+P  T  +DSF S        T LQ FRY SS  F T+  ++     +SNS
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVARNTIASNS 52

Query: 1563 DFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGK 1384
                  NP ++ N++  N           P SQ  +     S  +W+D W    + +  K
Sbjct: 53   T-----NPQRKSNIVFTNT----------PVSQYDSGGVSSSGGNWIDKWNGPHQKSHPK 97

Query: 1383 KPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXERIVEKLKKFGYIDDVSDKNENMS-RGI 1207
            + + V+NYRN   V                   +IVEKLKKFGY+DDV +  EN+  R I
Sbjct: 98   ESRPVMNYRNSETVSRSDGGSGGGSTME-----KIVEKLKKFGYMDDVKETKENVQERII 152

Query: 1206 EKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDERS---NGEVRFPWEKKAPTEQXXXXXXX 1036
            EKGSIEDIFY+EEG+LPN +GGFS + P G E     NGEVRFPWE+  P  +       
Sbjct: 153  EKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWER--PKVEEGSVRIK 210

Query: 1035 XXXXLAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKTCEVVRLKVEG 856
                LAELTLPESELRRLRN  +R KNKTKIGG GVTQ VVD I EKWKT E+V+LK EG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 855  APALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKSPS 676
            A ALNMRR+HEILERKTGGLVIWRSGTSVSLYRGV+YE P Q L KR+ +KNE SH S S
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPVQ-LNKRVYKKNETSHSSFS 329

Query: 675  A---------TNKTRQDSSEFGPLAGTDTPQVEPVSTDPDNKYPETSSEVRYEDEIEKLL 523
            +         +NKT  ++   G        Q     TD +NK  +T SEV+YEDEI+KLL
Sbjct: 330  SITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENK--DTESEVKYEDEIDKLL 387

Query: 522  DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 343
            D LGPRY DWPG  PLP+DADLLPG + GYQPPFR+LPYGVRS+LG+KEATALRRLAR L
Sbjct: 388  DGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVL 447

Query: 342  PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 163
            PPHFALGRSRQ +GLA AMIKLWERSSI K+ALKRGVQLTTSERMAED+K+LTGGVLLSR
Sbjct: 448  PPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSR 507

Query: 162  NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPS 13
            NKDFLV+YRGK+FLS DV E LLE+ERLAKALQDEEE+AR R S L+TP+
Sbjct: 508  NKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPT 557