BLASTX nr result
ID: Rehmannia28_contig00002964
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00002964
(309 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012829347.1| PREDICTED: general transcription factor IIH ... 164 1e-48
ref|XP_011101336.1| PREDICTED: general transcription factor IIH ... 163 3e-48
ref|XP_015080104.1| PREDICTED: general transcription factor IIH ... 152 7e-44
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ... 152 7e-44
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ... 152 7e-44
ref|XP_009776618.1| PREDICTED: general transcription factor IIH ... 150 4e-43
ref|XP_009626298.1| PREDICTED: general transcription factor IIH ... 149 8e-43
emb|CDP12389.1| unnamed protein product [Coffea canephora] 133 2e-36
gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlise... 129 6e-36
ref|XP_009363173.1| PREDICTED: general transcription factor IIH ... 122 4e-32
ref|XP_008367337.1| PREDICTED: general transcription factor IIH ... 121 5e-32
ref|XP_008391898.1| PREDICTED: general transcription factor IIH ... 121 8e-32
ref|XP_008219657.1| PREDICTED: general transcription factor IIH ... 120 3e-31
ref|XP_010675078.1| PREDICTED: general transcription factor IIH ... 118 8e-31
gb|KNA24492.1| hypothetical protein SOVF_014890 [Spinacia oleracea] 118 1e-30
ref|XP_010675067.1| PREDICTED: general transcription factor IIH ... 118 1e-30
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ... 115 1e-29
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ... 115 1e-29
emb|CBI19033.3| unnamed protein product [Vitis vinifera] 115 2e-29
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ... 115 2e-29
>ref|XP_012829347.1| PREDICTED: general transcription factor IIH subunit 3 [Erythranthe
guttata] gi|604297450|gb|EYU17663.1| hypothetical
protein MIMGU_mgv1a011002mg [Erythranthe guttata]
Length = 295
Score = 164 bits (416), Expect = 1e-48
Identities = 81/102 (79%), Positives = 84/102 (82%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS +QSQN RAEHLLQKLEEFVDKDESL E+SVDG GF CYIQRVFR
Sbjct: 73 FDSSVAQSQNQRAEHLLQKLEEFVDKDESLCREESVDGQGFSLLSGSLSMALCYIQRVFR 132
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SGPLHP PRILCLHGSPDGPGQYVAIMNSIFSAQ SMVPID+
Sbjct: 133 SGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDA 174
>ref|XP_011101336.1| PREDICTED: general transcription factor IIH subunit 3 [Sesamum
indicum] gi|747106105|ref|XP_011101337.1| PREDICTED:
general transcription factor IIH subunit 3 [Sesamum
indicum]
Length = 292
Score = 163 bits (413), Expect = 3e-48
Identities = 80/102 (78%), Positives = 83/102 (81%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS S+ Q RAEHLLQKLE+FV+KDESL EDSVDGPGF CYIQRVFR
Sbjct: 73 FDSSTSEGQTQRAEHLLQKLEDFVNKDESLCREDSVDGPGFSLLSGSLSMALCYIQRVFR 132
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SGPLHP PRILCLHGSPDGPGQYVAIMNSIFSAQ SMVPIDS
Sbjct: 133 SGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 174
>ref|XP_015080104.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
pennellii]
Length = 290
Score = 152 bits (384), Expect = 7e-44
Identities = 78/102 (76%), Positives = 81/102 (79%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS S Q RAE LL+KLE+FVDKDESL EDSVDG GF CYIQRVFR
Sbjct: 74 FDSSTSSMQ--RAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGALSMALCYIQRVFR 131
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SGPLHPQPRILCLHGSPDGPGQYVA+MNSIFSAQ SMVPIDS
Sbjct: 132 SGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDS 173
>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
tuberosum]
Length = 290
Score = 152 bits (384), Expect = 7e-44
Identities = 78/102 (76%), Positives = 81/102 (79%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS S Q RAE LL+KLE+FVDKDESL EDSVDG GF CYIQRVFR
Sbjct: 74 FDSSTSSMQ--RAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGSLSMALCYIQRVFR 131
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SGPLHPQPRILCLHGSPDGPGQYVA+MNSIFSAQ SMVPIDS
Sbjct: 132 SGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDS 173
>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
lycopersicum]
Length = 290
Score = 152 bits (384), Expect = 7e-44
Identities = 78/102 (76%), Positives = 81/102 (79%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS S Q RAE LL+KLE+FVDKDESL EDSVDG GF CYIQRVFR
Sbjct: 74 FDSSTSSMQ--RAECLLEKLEDFVDKDESLSQEDSVDGVGFSLLSGALSMALCYIQRVFR 131
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SGPLHPQPRILCLHGSPDGPGQYVA+MNSIFSAQ SMVPIDS
Sbjct: 132 SGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDS 173
>ref|XP_009776618.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
sylvestris]
Length = 291
Score = 150 bits (379), Expect = 4e-43
Identities = 76/102 (74%), Positives = 82/102 (80%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS+S Q RAE LL+KLEEFVDKDE+L EDSVDG GF CYIQRVFR
Sbjct: 74 FDSSSSSMQ--RAECLLEKLEEFVDKDETLSQEDSVDGVGFSLLSGSLSMALCYIQRVFR 131
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
+GPLHPQPRILCLHGSPDGPGQYVA+MN+IFSAQ SMVPIDS
Sbjct: 132 TGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDS 173
>ref|XP_009626298.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
tomentosiformis]
Length = 288
Score = 149 bits (377), Expect = 8e-43
Identities = 76/102 (74%), Positives = 81/102 (79%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFR 181
FDSS+S RAE LL+KLEEFVDKDESL EDSVDG GF CYIQRVFR
Sbjct: 74 FDSSSSMQ---RAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGSLSMALCYIQRVFR 130
Query: 182 SGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
+GPLHPQPRILCLHGSPDGPGQYVA+MN+IFSAQ SMVPIDS
Sbjct: 131 TGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDS 172
>emb|CDP12389.1| unnamed protein product [Coffea canephora]
Length = 287
Score = 133 bits (334), Expect = 2e-36
Identities = 73/104 (70%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Frame = +2
Query: 2 FDSSASQSQNLRAEHLLQKLEEFVDKDESLLH--EDSVDGPGFXXXXXXXXXXXCYIQRV 175
FDSS S S + RAE LL KLEEF + DESL +DS +G G CYIQRV
Sbjct: 74 FDSS-SGSVSQRAESLLPKLEEFAENDESLSERDDDSGNGVGSSLLSGSLSMALCYIQRV 132
Query: 176 FRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
FRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQ SMVPIDS
Sbjct: 133 FRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDS 176
>gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlisea aurea]
Length = 208
Score = 129 bits (325), Expect = 6e-36
Identities = 66/103 (64%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 FDSSASQSQNLRA-EHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVF 178
FDS+ SQ+Q+ E LLQ+LEEFV+KDES+ SV G F CYIQR+F
Sbjct: 73 FDSTTSQNQSQHCGETLLQRLEEFVEKDESMCRVSSVHGSCFSLLSGSLSMALCYIQRIF 132
Query: 179 RSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
R+G HPQPRILCLHGSPDGPGQY+AIMNSIFSAQ MVPIDS
Sbjct: 133 RTGNRHPQPRILCLHGSPDGPGQYIAIMNSIFSAQRLMVPIDS 175
>ref|XP_009363173.1| PREDICTED: general transcription factor IIH subunit 3 [Pyrus x
bretschneideri] gi|694371047|ref|XP_009363174.1|
PREDICTED: general transcription factor IIH subunit 3
[Pyrus x bretschneideri]
gi|694371051|ref|XP_009363175.1| PREDICTED: general
transcription factor IIH subunit 3 [Pyrus x
bretschneideri]
Length = 297
Score = 122 bits (306), Expect = 4e-32
Identities = 67/110 (60%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
Frame = +2
Query: 2 FDSSASQSQN--------LRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXX 157
+DSS+ +Q R +LLQKLEEFV KDE L E S +G
Sbjct: 71 YDSSSDSNQGSDHGRIMPARCSNLLQKLEEFVIKDEQLFKEGSREGISSSLLSGSLSMAL 130
Query: 158 CYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
CYIQRVFRSGPLHPQPRILCL GS DGP QYVAIMNSIFSAQ SMVPIDS
Sbjct: 131 CYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPIDS 180
>ref|XP_008367337.1| PREDICTED: general transcription factor IIH subunit 3-like [Malus
domestica]
Length = 274
Score = 121 bits (304), Expect = 5e-32
Identities = 67/110 (60%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Frame = +2
Query: 2 FDSSASQSQN--------LRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXX 157
+DSS+ +Q R LLQKLEEFV KDE L E S +G
Sbjct: 71 YDSSSDSNQGSDHGRIMPARCSXLLQKLEEFVIKDEQLFKEGSREGISSSLLSGSLSMAL 130
Query: 158 CYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
CYIQRVFRSGPLHPQPRILCL GS DGP QYVAIMNSIFSAQ SMVPIDS
Sbjct: 131 CYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPIDS 180
>ref|XP_008391898.1| PREDICTED: general transcription factor IIH subunit 3 [Malus
domestica] gi|657998960|ref|XP_008391899.1| PREDICTED:
general transcription factor IIH subunit 3 [Malus
domestica]
Length = 297
Score = 121 bits (304), Expect = 8e-32
Identities = 67/110 (60%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Frame = +2
Query: 2 FDSSASQSQN--------LRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXX 157
+DSS+ +Q R LLQKLEEFV KDE L E S +G
Sbjct: 71 YDSSSDSNQGSDHGRIMPARCSXLLQKLEEFVIKDEQLFKEGSREGISSSLLSGSLSMAL 130
Query: 158 CYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
CYIQRVFRSGPLHPQPRILCL GS DGP QYVAIMNSIFSAQ SMVPIDS
Sbjct: 131 CYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPIDS 180
>ref|XP_008219657.1| PREDICTED: general transcription factor IIH subunit 3 [Prunus mume]
Length = 296
Score = 120 bits (300), Expect = 3e-31
Identities = 66/109 (60%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Frame = +2
Query: 2 FDSSASQSQN-------LRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXC 160
+DSS S +Q R +LLQKLEEFV KDE L+ E +G C
Sbjct: 71 YDSSTSTNQGSDNGRMPARCVNLLQKLEEFVIKDEQLIKEGLREGIASSLLSGSLSMALC 130
Query: 161 YIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
YIQRVFRSGPLHPQPRILCL GS DGP QYVAIMN+IFSAQ SMVPIDS
Sbjct: 131 YIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDS 179
>ref|XP_010675078.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
[Beta vulgaris subsp. vulgaris]
Length = 278
Score = 118 bits (296), Expect = 8e-31
Identities = 59/87 (67%), Positives = 64/87 (73%)
Frame = +2
Query: 47 LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 226
+++ LEEFV KDESL D V G CYIQRVFRSGPLHPQPRILCLHG
Sbjct: 76 VMKNLEEFVTKDESLSSVDVVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHG 135
Query: 227 SPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SPDGP QYVA+MN+IFSAQ SMVPIDS
Sbjct: 136 SPDGPEQYVAVMNAIFSAQRSMVPIDS 162
>gb|KNA24492.1| hypothetical protein SOVF_014890 [Spinacia oleracea]
Length = 305
Score = 118 bits (296), Expect = 1e-30
Identities = 58/101 (57%), Positives = 68/101 (67%)
Frame = +2
Query: 5 DSSASQSQNLRAEHLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRS 184
+SS +L+ LE+FV DESL D+ +G G CY+QRVFR+
Sbjct: 89 ESSGDAKMPAFCSEVLKSLEDFVKNDESLSSVDAGNGVGSSLLSGSLSMALCYVQRVFRT 148
Query: 185 GPLHPQPRILCLHGSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
GPLHPQPRILCLHGSPDGP QYVA+MNSIFSAQ SMVP+DS
Sbjct: 149 GPLHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMVPVDS 189
>ref|XP_010675067.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
[Beta vulgaris subsp. vulgaris]
gi|870868920|gb|KMT19706.1| hypothetical protein
BVRB_1g007610 [Beta vulgaris subsp. vulgaris]
Length = 306
Score = 118 bits (296), Expect = 1e-30
Identities = 59/87 (67%), Positives = 64/87 (73%)
Frame = +2
Query: 47 LLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLHG 226
+++ LEEFV KDESL D V G CYIQRVFRSGPLHPQPRILCLHG
Sbjct: 104 VMKNLEEFVTKDESLSSVDVVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHG 163
Query: 227 SPDGPGQYVAIMNSIFSAQHSMVPIDS 307
SPDGP QYVA+MN+IFSAQ SMVPIDS
Sbjct: 164 SPDGPEQYVAVMNAIFSAQRSMVPIDS 190
>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
[Fragaria vesca subsp. vesca]
Length = 298
Score = 115 bits (289), Expect = 1e-29
Identities = 59/88 (67%), Positives = 63/88 (71%)
Frame = +2
Query: 44 HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 223
HLL+KLEEFV KDE LL E S +G CYIQ+VFRSGP HP PRILCL
Sbjct: 92 HLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQ 151
Query: 224 GSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
GS DGP QYVAIMN+IFSAQ SMVPIDS
Sbjct: 152 GSSDGPEQYVAIMNAIFSAQRSMVPIDS 179
>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
[Fragaria vesca subsp. vesca]
Length = 300
Score = 115 bits (289), Expect = 1e-29
Identities = 59/88 (67%), Positives = 63/88 (71%)
Frame = +2
Query: 44 HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 223
HLL+KLEEFV KDE LL E S +G CYIQ+VFRSGP HP PRILCL
Sbjct: 92 HLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQ 151
Query: 224 GSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
GS DGP QYVAIMN+IFSAQ SMVPIDS
Sbjct: 152 GSSDGPEQYVAIMNAIFSAQRSMVPIDS 179
>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 115 bits (288), Expect = 2e-29
Identities = 59/88 (67%), Positives = 63/88 (71%)
Frame = +2
Query: 44 HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 223
+LLQKLEEFV DE L E G G CYIQRVFR+GPLHPQPRILCL
Sbjct: 93 NLLQKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQ 152
Query: 224 GSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
GSPDGP QYVA+MN+IFSAQ SMVPIDS
Sbjct: 153 GSPDGPEQYVAVMNAIFSAQRSMVPIDS 180
>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
vinifera]
Length = 303
Score = 115 bits (288), Expect = 2e-29
Identities = 59/88 (67%), Positives = 63/88 (71%)
Frame = +2
Query: 44 HLLQKLEEFVDKDESLLHEDSVDGPGFXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLH 223
+LLQKLEEFV DE L E G G CYIQRVFR+GPLHPQPRILCL
Sbjct: 99 NLLQKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQ 158
Query: 224 GSPDGPGQYVAIMNSIFSAQHSMVPIDS 307
GSPDGP QYVA+MN+IFSAQ SMVPIDS
Sbjct: 159 GSPDGPEQYVAVMNAIFSAQRSMVPIDS 186