BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00002643
         (2453 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ...   780   0.0  
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ...   682   0.0  
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   616   0.0  
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   616   0.0  
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-...   616   0.0  
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   609   0.0  
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-...   609   0.0  
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota...   606   0.0  
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   604   0.0  
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   602   0.0  
ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB ...   603   0.0  
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ...   602   0.0  
gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   599   0.0  
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   600   0.0  
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB ...   598   0.0  
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB ...   600   0.0  
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   599   0.0  
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB ...   598   0.0  
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ...   597   0.0  
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   596   0.0  

>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
            indicum]
          Length = 613

 Score =  780 bits (2014), Expect = 0.0
 Identities = 420/558 (75%), Positives = 442/558 (79%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPL 1774
            TT+L+FE+L+LS LEAIPN VPADR            MLDLE LPSLDAHPI+ A NKP 
Sbjct: 56   TTVLDFEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGLPSLDAHPITTAANKPW 115

Query: 1773 AYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHK 1594
             YVGA  PPSEV LGAN D ETLLTS                          AMMVSHHK
Sbjct: 116  TYVGAIAPPSEVTLGANLDTETLLTSEEAVIAAAASEALALAKAAVKVAKDAAMMVSHHK 175

Query: 1593 STKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDV 1414
             TK +S+ TG+  +V+T + EK+QLAHLAERV +R+ KVAE+GLGE  PA+  L ESDDV
Sbjct: 176  PTKSNSSATGMFADVNTPIFEKNQLAHLAERVDIRDAKVAEVGLGENYPAAHSLTESDDV 235

Query: 1413 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1234
            EPSAEELEFLEAQL+KSIAVRSKRQT              ANI               VQ
Sbjct: 236  EPSAEELEFLEAQLSKSIAVRSKRQTERRARRTRAAEKAAANIVSVKSGSSSRKKRSAVQ 295

Query: 1233 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1054
            DVDY+DP                SEEQVLS GIQVLLKLERLQ ELT+R GG PTF+QWA
Sbjct: 296  DVDYSDPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFAQWA 355

Query: 1053 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 874
            AAAGVD +TLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 415

Query: 873  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 694
            AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 475

Query: 693  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 514
            R PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET+EDLL
Sbjct: 476  RHPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAEDLL 535

Query: 513  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 334
            IKQFMKQDLAKVLDSLNPREKQVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  IKQFMKQDLAKVLDSLNPREKQVVIWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 333  RKLKNKKRTKHLQQYVMP 280
            RKLKNKKRTKHLQQYVMP
Sbjct: 596  RKLKNKKRTKHLQQYVMP 613



 Score = 84.0 bits (206), Expect = 4e-13
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -2

Query: 2107 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCILSITSAPT 1955
            MSCLLPQFKCSPDTFAVNFKSQSH  V SSK+R + +FRTQCILS T  PT
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPT 51


>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttata]
            gi|604314290|gb|EYU27177.1| hypothetical protein
            MIMGU_mgv1a003367mg [Erythranthe guttata]
          Length = 589

 Score =  682 bits (1760), Expect = 0.0
 Identities = 387/558 (69%), Positives = 418/558 (74%), Gaps = 1/558 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPL 1774
            TT+LEFE+L+LSPLE IPNS+PADR            +LDL+KL SL      +A NK L
Sbjct: 57   TTLLEFEKLQLSPLETIPNSLPADRSWTTPRAKTS--LLDLDKLTSLP-----VASNKTL 109

Query: 1773 AYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHK 1594
             YVG+ GPPSE+NLGAN DKE L+TS                          AMMVS H+
Sbjct: 110  TYVGSVGPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHR 169

Query: 1593 STKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDV 1414
            STKPD+ +     EVDTS          AERVVVRE   AEIG GE +     L ESDD 
Sbjct: 170  STKPDTKS---FLEVDTS----------AERVVVRE---AEIGSGEND--DHVLGESDDS 211

Query: 1413 E-PSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXV 1237
            E PSAEELE L+ QL+ SIAVRSKRQ               AN+                
Sbjct: 212  EEPSAEELELLDLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPV- 270

Query: 1236 QDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQW 1057
            Q+VDY+DP                SEEQVLSEGIQVLLKLERLQ EL ER GG P++SQW
Sbjct: 271  QEVDYSDPLRYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQW 330

Query: 1056 AAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 877
            AAAAGVD +TLR+QINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Sbjct: 331  AAAAGVDQKTLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 390

Query: 876  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 697
            GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN
Sbjct: 391  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 450

Query: 696  GRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDL 517
            GR+P+DEEVAEATGLSMKRLSAVMLTPK PRSLDQKIG+NQDLKPS+VI+DPEAETSE+L
Sbjct: 451  GRVPNDEEVAEATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEEL 510

Query: 516  LIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 337
            LIKQFMKQDLA VLDSLNPREKQVVKWRFG+EDGRMKTLQEIGELMGVSRER+RQIESCA
Sbjct: 511  LIKQFMKQDLADVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCA 570

Query: 336  FRKLKNKKRTKHLQQYVM 283
            FRKLKNKKRTK LQQYVM
Sbjct: 571  FRKLKNKKRTKQLQQYVM 588



 Score = 83.6 bits (205), Expect = 5e-13
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -2

Query: 2107 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCILSITSAP 1958
            MSCLLPQFKCSPDTFAVNFKSQ+   V+SSK+R SINFRTQC+LS TS P
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPP 50


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
            EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  616 bits (1589), Expect = 0.0
 Identities = 335/522 (64%), Positives = 381/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+    S   N+P  Y GA GPP+EVNLGA    ETLLTS         
Sbjct: 67   VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 126

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+M+ +  S+  D+    +     TS+ + ++L  L    ++ 
Sbjct: 127  SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 185

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            E    E GL E N       +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT         
Sbjct: 186  ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 245

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               +Q+VDY+DP                +EE  LSEGIQ 
Sbjct: 246  AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 305

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 306  LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 365

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 366  AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 425

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 426  RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 485

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 486  IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 545

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 546  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 587


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  616 bits (1589), Expect = 0.0
 Identities = 335/522 (64%), Positives = 381/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+    S   N+P  Y GA GPP+EVNLGA    ETLLTS         
Sbjct: 80   VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 139

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+M+ +  S+  D+    +     TS+ + ++L  L    ++ 
Sbjct: 140  SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 198

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            E    E GL E N       +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT         
Sbjct: 199  ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 258

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               +Q+VDY+DP                +EE  LSEGIQ 
Sbjct: 259  AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 318

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 319  LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 378

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 379  AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 438

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 439  RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 498

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 499  IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 558

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 559  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 600


>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            sylvestris]
          Length = 629

 Score =  616 bits (1589), Expect = 0.0
 Identities = 341/561 (60%), Positives = 394/561 (70%), Gaps = 5/561 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLE--KLPSLDAHPISIAENK 1780
            +T+L+ E+LKL  +E + +SV A+R            +LD+   KL S +A+P S+A ++
Sbjct: 68   STVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSA-VLDIPRLKLLSFEANPDSVAPDR 126

Query: 1779 PLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSH 1600
            P  Y GA GPP+E N  +    E L+TS                           ++V H
Sbjct: 127  PWTYTGAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVGH 186

Query: 1599 HKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR---EPKVAEIGLGEINPASDPLA 1429
            +     D    G L E  T+  E   LA  +E   VR   E K +E+   E +   D L 
Sbjct: 187  NNLKNSDDAGRGTLSEARTTPFESVPLAQPSETGRVRVGAEFKGSEMKWSESSLFEDSLT 246

Query: 1428 ESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXX 1249
            +SDD+EPS EELE L++QL+  IAV+S RQT              AN+            
Sbjct: 247  DSDDLEPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKK 306

Query: 1248 XXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPT 1069
               VQ+VDY+DP                SEEQ LS GIQ LLKLERL++EL  RCGG PT
Sbjct: 307  RTSVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAARCGGQPT 366

Query: 1068 FSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 889
             +QWAAAAGV+ +TLRK++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 367  IAQWAAAAGVEQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCR 426

Query: 888  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 709
            GLVRGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL
Sbjct: 427  GLVRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 486

Query: 708  YSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET 529
            ++ENGRLP+DEEVAEATGLSMKRL+AVMLTPKAPRSLDQKIG NQ LKPS+VIADPEAET
Sbjct: 487  FTENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAET 546

Query: 528  SEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQI 349
            SE++L+KQFM+QDL KVLD+LNPREKQVVKWRFGL DGRMKTLQEIGELMGVSRERIRQI
Sbjct: 547  SEEMLMKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQI 606

Query: 348  ESCAFRKLKNKKRTKHLQQYV 286
            ESCAFRKLKNKKRTK LQQY+
Sbjct: 607  ESCAFRKLKNKKRTKFLQQYI 627


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  609 bits (1571), Expect = 0.0
 Identities = 330/525 (62%), Positives = 389/525 (74%), Gaps = 5/525 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +L+LEKL  PSLDA+  S+  N+P  Y GA GPP++ NL A    ETLLTS         
Sbjct: 52   VLNLEKLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAA 111

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                              ++++++  T+ +ST+    PE D   ++  Q     + V + 
Sbjct: 112  AEAVTLAKAAVKVAKDATLLINNNPCTRAESTSL-FSPEDDALHLKWPQHMKTGQPVRLG 170

Query: 1488 E---PKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXX 1318
            +   PK A++    +  A   + E+DD+EP+ EELE L++QL+  IAVRS+RQT      
Sbjct: 171  DSMGPKTAQLDDYSMQCA---IKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARR 227

Query: 1317 XXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEG 1138
                    A +               +QD+D++DP                +EE  LSEG
Sbjct: 228  TRAAEKAAATVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEG 287

Query: 1137 IQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLV 958
            IQ LLKLE+LQEELTERCG  PTF+QWAAAAGVD +TLR++INYGILCKDKMIKSNIRLV
Sbjct: 288  IQDLLKLEKLQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLV 347

Query: 957  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 778
            ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 348  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 407

Query: 777  RTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSL 598
            RTIRLPFHMVEATYRVKEARKQLYS+NGR PDDEEVAEATGLSMKRL+AV+LTPKAPRSL
Sbjct: 408  RTIRLPFHMVEATYRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSL 467

Query: 597  DQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLED 418
            +QKIGINQ+LKPS+VIADP+AETSED+LI++FMKQDL KVLDSLNPREKQV++WRFG+ED
Sbjct: 468  EQKIGINQNLKPSEVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMED 527

Query: 417  GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 528  GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLV 572


>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            tomentosiformis]
          Length = 641

 Score =  609 bits (1571), Expect = 0.0
 Identities = 337/561 (60%), Positives = 394/561 (70%), Gaps = 5/561 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLE--KLPSLDAHPISIAENK 1780
            +T+L+ E+LKL  +E + +SV A+R            +LD+   KL S +A+P S+A ++
Sbjct: 80   STVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSA-VLDIPRLKLLSFEANPDSVAPDR 138

Query: 1779 PLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSH 1600
            P  Y G  GPP+E N  +    E L+TS                           ++V H
Sbjct: 139  PWTYTGPVGPPTEANTKSVLATENLVTSDEAVVAAAAAEAVALAKAALKFAKDVVLLVGH 198

Query: 1599 HKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE--RVVV-REPKVAEIGLGEINPASDPLA 1429
            +     D    G L E  T+  E   LA  +E  RV V  E K +E+   E +   D L 
Sbjct: 199  NNLKNSDDAGRGTLSEARTTPFESVHLAQPSETGRVGVGAEFKGSEMKWSESSLLEDSLT 258

Query: 1428 ESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXX 1249
            +SDD++PS EELE L++QL+  IAV+S RQT              AN+            
Sbjct: 259  DSDDLDPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKK 318

Query: 1248 XXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPT 1069
               VQ+VDY+DP                SEEQ LS GIQ  LKLERL++EL +RCGG PT
Sbjct: 319  RTSVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDQLKLERLEQELADRCGGQPT 378

Query: 1068 FSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 889
             +QWAAAAGV+ +TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 379  IAQWAAAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 438

Query: 888  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 709
            GLVRGAEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL
Sbjct: 439  GLVRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 498

Query: 708  YSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET 529
            ++ENGRLP+DEEVAEATGLSMKRL+AVMLTPKAPRSLDQKIG NQ LKPS+VIADPEAET
Sbjct: 499  FTENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAET 558

Query: 528  SEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQI 349
            SE++L+KQFM+QDL +VLD+LNPREKQVVKWRFGL DGRMKTLQEIGELMGVSRERIRQI
Sbjct: 559  SEEMLMKQFMRQDLERVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQI 618

Query: 348  ESCAFRKLKNKKRTKHLQQYV 286
            ESCAFRKLKNKKRTK LQQY+
Sbjct: 619  ESCAFRKLKNKKRTKFLQQYI 639


>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
            gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
            rpoD [Morus notabilis]
          Length = 574

 Score =  606 bits (1562), Expect = 0.0
 Identities = 332/522 (63%), Positives = 383/522 (73%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +L +EKL  PSLDA+  S+  N+P  Y GA GPP E N  A    ETLLTS         
Sbjct: 61   VLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAAA 120

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A++V    ST+ +S +      + +S     + A  A RV  R
Sbjct: 121  AEAVTLAKAAVKVAKDAALLV--RPSTRAESIS------LVSSEARNIKTAQAASRV--R 170

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +   AE+ L E +P  D   ES+D++P+ EEL  L+ QL+KSIAVRS+RQ+         
Sbjct: 171  DSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRA 230

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               VQDVD++DP                +EE  LSEGIQ 
Sbjct: 231  AEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQD 290

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE+LQEEL ERCGGPPTF+QWAAAAGVD +TLR++INYGILCKDKMIKSN+RLVISI
Sbjct: 291  LLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISI 350

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 351  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 410

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QK
Sbjct: 411  RLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQK 470

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS++IADP+AET ED+L +QFMKQDL KVLDSLN REKQV++WRFG++DGRM
Sbjct: 471  IGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRM 530

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 531  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLI 572


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  604 bits (1558), Expect = 0.0
 Identities = 332/531 (62%), Positives = 385/531 (72%), Gaps = 11/531 (2%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PS +AHP S+A ++P  Y+GA GPPSE +LGA    + LLTS         
Sbjct: 91   VLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAA 150

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VV 1492
                             A+M  ++   K +  + G+    D S   K  L   AER  ++
Sbjct: 151  AEAVALARAAVKVAKDAALMAENYNYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGII 208

Query: 1491 REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXX 1312
             +    E  + E +   +   ESD++EP+ EELE LE QL++SIAVRS+RQT        
Sbjct: 209  GDSPTDESEMEEDDSEQNSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTR 268

Query: 1311 XXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQ 1132
                  AN+               +QDVDY+DP                +EE  LSEGIQ
Sbjct: 269  AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 328

Query: 1131 VLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVIS 952
             LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVIS
Sbjct: 329  DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 388

Query: 951  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 772
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 389  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 448

Query: 771  IRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQ 592
            IRLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQ
Sbjct: 449  IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 508

Query: 591  KIGINQDLKPS--------DVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 436
            KIGINQ+LKPS        +VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++W
Sbjct: 509  KIGINQNLKPSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRW 568

Query: 435  RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            RFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 569  RFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 619


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
            gi|296090195|emb|CBI40014.3| unnamed protein product
            [Vitis vinifera]
          Length = 575

 Score =  602 bits (1553), Expect = 0.0
 Identities = 321/522 (61%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL++H  S+A ++P  Y+G  GPP+E N  A   +ETLLTS         
Sbjct: 53   VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAA 112

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A +V  + S K ++     L   DTS   + Q        ++ 
Sbjct: 113  AEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG 172

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +   AE G+ + N   D   +SDD+EP+ EELE LEA+ +KSI VRS RQ          
Sbjct: 173  DSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARA 232

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 A +               +Q+VDY+DP                +EE  LSEGIQ 
Sbjct: 233  AEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 292

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE+LQE+L ER G  PTF+QWAAAAGVD +TLR++ NYGI CKDKMIKSNIRLVISI
Sbjct: 293  LLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISI 352

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMN+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 353  AKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 412

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL+AV+LTPKAPRSLDQK
Sbjct: 413  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQK 472

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADP+AET+E+LLIKQFM++DL KVL+SLNPREKQV++WR+GLEDGR 
Sbjct: 473  IGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRT 532

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY++
Sbjct: 533  KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 574


>ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum pennellii]
          Length = 613

 Score =  603 bits (1554), Expect = 0.0
 Identities = 338/561 (60%), Positives = 388/561 (69%), Gaps = 5/561 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENK 1780
            +T+L  E+L+L  +E + NSV A+R            + D++KL  PS +A+P S+A ++
Sbjct: 56   STVLGIEKLQLPSIEILSNSVAAERSWKSTSAATTT-VPDIQKLKLPSFEANPDSVAPDR 114

Query: 1779 PLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSH 1600
            P  Y GA GPP+E    AN   E  L S                           M+V +
Sbjct: 115  PWTYTGAVGPPAE----ANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGY 170

Query: 1599 HKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLA 1429
            +     D+   G L E  T+  E   LA   E     V  E   +E+     +   D L 
Sbjct: 171  NNLKDSDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLT 230

Query: 1428 ESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXX 1249
            +SDD+EPS EELE L++QL+  IAV+S RQT              AN+            
Sbjct: 231  DSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKK 290

Query: 1248 XXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPT 1069
               VQDVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PT
Sbjct: 291  RASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPT 350

Query: 1068 FSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 889
            F+QWAAAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 351  FTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410

Query: 888  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 709
            GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL
Sbjct: 411  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 470

Query: 708  YSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET 529
             +ENGR P+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AET
Sbjct: 471  LTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAET 530

Query: 528  SEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQI 349
            SE++L KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQI
Sbjct: 531  SEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590

Query: 348  ESCAFRKLKNKKRTKHLQQYV 286
            ESCAFRKLKNKKRTK LQQY+
Sbjct: 591  ESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
          Length = 613

 Score =  602 bits (1553), Expect = 0.0
 Identities = 337/560 (60%), Positives = 385/560 (68%), Gaps = 4/560 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTM-LDLEKLPSLDAHPISIAENKP 1777
            +T+L  E+L+L  +E + NSV A+R              +   KLPS +A+P S+A ++P
Sbjct: 56   STVLGIEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRP 115

Query: 1776 LAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHH 1597
              Y GA GPP+E    AN   E  L S                           M+V ++
Sbjct: 116  WTYTGAVGPPAE----ANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYN 171

Query: 1596 KSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLAE 1426
                 D+   G L E  T+  E   LA   E     V  E   +E+     +   D L +
Sbjct: 172  NLKDSDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTD 231

Query: 1425 SDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXX 1246
            SDD+EPS EELE L++QL+  IAV+S RQT              AN+             
Sbjct: 232  SDDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKR 291

Query: 1245 XXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTF 1066
              VQDVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF
Sbjct: 292  ASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTF 351

Query: 1065 SQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRG 886
            +QWAAAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRG
Sbjct: 352  TQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRG 411

Query: 885  LVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLY 706
            LVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 
Sbjct: 412  LVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLL 471

Query: 705  SENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETS 526
            +ENGR P+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AETS
Sbjct: 472  TENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETS 531

Query: 525  EDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIE 346
            E++L KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIE
Sbjct: 532  EEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIE 591

Query: 345  SCAFRKLKNKKRTKHLQQYV 286
            SCAFRKLKNKKRTK LQQY+
Sbjct: 592  SCAFRKLKNKKRTKFLQQYI 611


>gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 525

 Score =  599 bits (1544), Expect = 0.0
 Identities = 329/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+AH  ++A N+   Y GA GP +E NLG +   ETL TS         
Sbjct: 4    VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MV+HH S KP S    I    DT+    +QL       ++ 
Sbjct: 63   AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISSSADTNTSMWAQLTERERASIIG 121

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +  + E    E      PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT         
Sbjct: 122  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               VQ+VDY+DP                +EE  LS GIQ 
Sbjct: 182  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 242  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 302  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+L+PKAPRSLDQK
Sbjct: 362  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQK 421

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 422  IGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 482  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  600 bits (1548), Expect = 0.0
 Identities = 328/522 (62%), Positives = 380/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            ++D EKL  PSL+AH IS+  ++PL Y+GA  PP++    A    E L+T          
Sbjct: 59   VVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAA 118

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MVS + S+K D     I  E+DT   E +QL  + +  +V 
Sbjct: 119  VEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVH 178

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
                AE         S P  +SD ++P+ EEL+ L+ QL+KSIAVRS RQT         
Sbjct: 179  HSLGAE---------SRPKEDSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARA 229

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               +QDVDY+DP                +EE   SEGIQ 
Sbjct: 230  AEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQD 289

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE+L EEL ER GG PTF+QWAAAAG+D +TLRK++NYGILCKDKMIKSNIRLVISI
Sbjct: 290  LLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISI 349

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 350  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 409

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRV+EARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQK
Sbjct: 410  RLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQK 469

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADP+AET+E+LL+K+FMKQDL KVLDSLNPREKQV++WRFGLEDGRM
Sbjct: 470  IGINQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRM 529

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK+LQQY++
Sbjct: 530  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLI 571


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  598 bits (1542), Expect = 0.0
 Identities = 329/522 (63%), Positives = 376/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+AH  ++A N+   Y GA GP +E NLG +   ETL TS         
Sbjct: 4    VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MV+HH S KP S    I    DT+    +QL       ++ 
Sbjct: 63   AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTNTSMWAQLTERERASIIG 121

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +  + E    E      PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT         
Sbjct: 122  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               VQ+VDY+DP                +EE  LS GIQ 
Sbjct: 182  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 242  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 302  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK
Sbjct: 362  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 421

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
             GINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 422  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 482  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum tuberosum]
          Length = 613

 Score =  600 bits (1548), Expect = 0.0
 Identities = 339/561 (60%), Positives = 388/561 (69%), Gaps = 5/561 (0%)
 Frame = -3

Query: 1953 TTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENK 1780
            +T+L  E+L+L  +E + NSV A+R            + D++KL  PS +A+P S+A ++
Sbjct: 56   STVLGIEKLQLPSIEILSNSVAAERSWKSPSAATTT-VPDIQKLKLPSFEANPDSVAPDR 114

Query: 1779 PLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSH 1600
            P  Y GA GPP+E    AN   E  L S                           M+V +
Sbjct: 115  PWTYTGAVGPPAE----ANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGY 170

Query: 1599 HKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE--RV-VVREPKVAEIGLGEINPASDPLA 1429
            +     D+   G L E  T+  E   LA   E  RV V  E   +E+     +   + L 
Sbjct: 171  NNLNDSDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLT 230

Query: 1428 ESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXX 1249
            +SDD+EPS EELE L++QL+  IAV+S RQT              AN+            
Sbjct: 231  DSDDLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKK 290

Query: 1248 XXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPT 1069
               VQDVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PT
Sbjct: 291  RASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPT 350

Query: 1068 FSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 889
            F+QWAAAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 351  FTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410

Query: 888  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL 709
            GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL
Sbjct: 411  GLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQL 470

Query: 708  YSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET 529
             +ENGR P+D EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N+ LKPS+V+ADPEAET
Sbjct: 471  LTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAET 530

Query: 528  SEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQI 349
            SE++L KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQI
Sbjct: 531  SEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQI 590

Query: 348  ESCAFRKLKNKKRTKHLQQYV 286
            ESCAFRKLKNKKRTK LQQY+
Sbjct: 591  ESCAFRKLKNKKRTKFLQQYI 611


>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 605

 Score =  599 bits (1544), Expect = 0.0
 Identities = 329/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+AH  ++A N+   Y GA GP +E NLG +   ETL TS         
Sbjct: 84   VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MV+HH S KP S    I    DT+    +QL       ++ 
Sbjct: 143  AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISSSADTNTSMWAQLTERERASIIG 201

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +  + E    E      PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT         
Sbjct: 202  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               VQ+VDY+DP                +EE  LS GIQ 
Sbjct: 262  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 322  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 382  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+L+PKAPRSLDQK
Sbjct: 442  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQK 501

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 502  IGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 562  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 603


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  598 bits (1542), Expect = 0.0
 Identities = 329/522 (63%), Positives = 376/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LD+EKL  PSL+AH  ++A N+   Y GA GP +E NLG +   ETL TS         
Sbjct: 84   VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MV+HH S KP S    I    DT+    +QL       ++ 
Sbjct: 143  AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTNTSMWAQLTERERASIIG 201

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +  + E    E      PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT         
Sbjct: 202  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               VQ+VDY+DP                +EE  LS GIQ 
Sbjct: 262  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 322  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 382  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK
Sbjct: 442  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 501

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
             GINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 502  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 562  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 603


>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
            gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
            polymerase sigma factor sigB [Jatropha curcas]
            gi|643732514|gb|KDP39610.1| hypothetical protein
            JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  597 bits (1539), Expect = 0.0
 Identities = 323/522 (61%), Positives = 370/522 (70%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            +LDLEKL  PS +AHP S+  N P  YVG+ GPP E   G+    ETL+T          
Sbjct: 58   VLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPKET-FGSTLATETLITGDDAVIAAAA 116

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A++V    S++ +S     +P +        Q        ++ 
Sbjct: 117  AEAVALARAAAKVAKDAAILVKSFPSSEAESKLE--IPSIADVSSRWPQFTETDRARIIG 174

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
            +   AE G  E +P   P  ESD +EP+ EELE L+ QL++ IAVRS+RQT         
Sbjct: 175  DSVTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRA 234

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                 AN+               +Q+VDY+DP                +EE  LSEGIQ 
Sbjct: 235  AEKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQD 294

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLERL EEL ERCGG PTF QWAAAAGVD +TLR ++NYGI CKD+MIKSNIRLVISI
Sbjct: 295  LLKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISI 354

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 355  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 414

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRVKEARKQLYSENGR PDDEEVAEATGLSMKRLSAV+LTPKAPRSLDQK
Sbjct: 415  RLPFHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQK 474

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IGIN DLKPS++IADP+AET+EDLL+KQFMKQDL KVLDSL+PRE QV++WRFGLEDGR+
Sbjct: 475  IGINMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRI 534

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGE+MGVSRERIRQIES AFRKLK KKRTK L+QY++
Sbjct: 535  KTLQEIGEIMGVSRERIRQIESSAFRKLKKKKRTKQLKQYLV 576



 Score = 63.2 bits (152), Expect = 1e-06
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
 Frame = -2

Query: 2107 MSCLLPQFKCSPDTFAVNFKS---QSHAFVNSSKNRVSINFRTQCILSITSAPTN 1952
            MSCLLPQFKC PDTF+++F++   Q+  F  S+K+R  + FR QCILS TS  T+
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTSPSTS 55


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  596 bits (1537), Expect = 0.0
 Identities = 318/522 (60%), Positives = 378/522 (72%), Gaps = 2/522 (0%)
 Frame = -3

Query: 1842 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1669
            ++D+EKL  PSL++H IS+A ++PL+Y+GA GPP++ +  A    E+L+T          
Sbjct: 62   LVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAAA 121

Query: 1668 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1489
                             A+MV+   S++ ++  +    E     +EK+QL    E   + 
Sbjct: 122  AEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRID 181

Query: 1488 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1309
                 E    E         +SD ++ S EE + L+ QL KSIAVRS RQT         
Sbjct: 182  HSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRARA 241

Query: 1308 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1129
                  N+               +QD+DY+DP                +EE  LSEGIQ 
Sbjct: 242  MEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 301

Query: 1128 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 949
            LLKLE+L EEL ERCGG PTF+QWAAAAGVD +TLRK++NYGILCKDKMIKSNIRLVISI
Sbjct: 302  LLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 361

Query: 948  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 769
            AKNYQGAGMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 362  AKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 421

Query: 768  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 589
            RLPFHMVEATYRV+EA+KQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAP SLDQK
Sbjct: 422  RLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQK 481

Query: 588  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 409
            IG+NQD+KPS++IADP+AET+E+LLIKQFMKQDL KVLDSLNPREKQV++WRFG+EDGRM
Sbjct: 482  IGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRM 541

Query: 408  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 283
            KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTK+LQQYV+
Sbjct: 542  KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKNLQQYVI 583