BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00001422
         (347 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275615.1| PREDICTED: uncharacterized protein LOC104610...    76   6e-14
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]            76   8e-14
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]         76   8e-14
ref|XP_012481063.1| PREDICTED: uncharacterized protein LOC105795...    74   3e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    74   5e-13
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    73   7e-13
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]    73   9e-13
emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]    72   2e-12
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...    71   4e-12
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...    71   4e-12
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]    70   6e-12
gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indi...    68   7e-12
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    70   8e-12
gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposo...    68   1e-11
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    70   1e-11
gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposo...    69   1e-11
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    69   2e-11
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    69   2e-11
ref|XP_012468746.1| PREDICTED: uncharacterized protein LOC105786...    69   3e-11
gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]    68   3e-11

>ref|XP_010275615.1| PREDICTED: uncharacterized protein LOC104610610 [Nelumbo nucifera]
          Length = 1432

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 17/127 (13%)
 Frame = -3

Query: 333 MGQDQATGATLLQGTVNNGLYSFQ------------LSTNSKSIPAPVSPSFNQGRRH-- 196
           M QDQ +   +LQG +  GLYSF+             S+ S     P SPS      H  
Sbjct: 274 MDQDQVSKRIILQGKLRVGLYSFEDLHVTRFVSSSAFSSASTVSQQPSSPSATPMSAHTA 333

Query: 195 ---SLSANAIHSKKVPSLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSK 25
              S  ++   S  V    +WH+RLGH SL ++ + L +CN+P  N  +  +C +C+ SK
Sbjct: 334 YTASAFSSVATSSSVSVFHLWHNRLGHLSLPVLNNVLNACNVPSVNKKDLVVCKACVYSK 393

Query: 24  SHRLPYH 4
            H+LPYH
Sbjct: 394 CHQLPYH 400


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 41/109 (37%), Positives = 57/109 (52%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +DQ T +TLLQG    GLY           P P+  +  QGR+  +S ++  S+      
Sbjct: 403 KDQTTKSTLLQGRSRGGLY-----------PIPLKSTTPQGRQALVSTSSAESR------ 445

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPYHK 1
            WHSRLGH S  +V   L+  NIP S    E +C +C  +KSH+LPY +
Sbjct: 446 -WHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSR 493


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 41/109 (37%), Positives = 57/109 (52%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +DQ T +TLLQG    GLY           P P+  +  QGR+  +S ++  S+      
Sbjct: 403 KDQTTKSTLLQGRSRGGLY-----------PIPLKSTTPQGRQALVSTSSAESR------ 445

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPYHK 1
            WHSRLGH S  +V   L+  NIP S    E +C +C  +KSH+LPY +
Sbjct: 446 -WHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSR 493


>ref|XP_012481063.1| PREDICTED: uncharacterized protein LOC105795961 [Gossypium
           raimondii]
          Length = 501

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLST-NSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSL 151
           QD  T  TLL+G ++NGLY F +S  +S  IP+ +  + +       +A  I S  V   
Sbjct: 309 QDIQTMTTLLEGRMHNGLYRFDVSHGDSIKIPSKLIGAQSFSSAQLNNAQLISSSAV--- 365

Query: 150 AIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPY 7
            IWH+RLGH   +I+ H L++ N+P+  D   S+CSSC + K+H+L +
Sbjct: 366 -IWHARLGHPCNNILSHVLRTFNVPFKQDSLPSVCSSCQLGKAHKLHF 412


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 41/106 (38%), Positives = 57/106 (53%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D  T   L QG + NGLY F + +N K    P S   N    HS  ++ + +K      
Sbjct: 438 KDLHTKMVLAQGKLENGLYKFPVFSNLK----PYSSINNASAFHSQFSSTVENKA----E 489

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
           +WH+RLGHAS DIV   + +CN+  S      +CS C ++KSHRLP
Sbjct: 490 LWHNRLGHASFDIVSKVMNTCNVA-SGKYKSFVCSDCQLAKSHRLP 534


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 40/106 (37%), Positives = 58/106 (54%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D+ T   L QG + NGLY F + +N K    P S   N    HS  ++ I +K      
Sbjct: 253 KDRHTKMVLAQGKLENGLYKFPVFSNKK----PYSSVNNASAFHSHFSSTIENKA----E 304

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
           +WH+RLGH + DIV   + +CN+  S     ++CS C ++KSHRLP
Sbjct: 305 LWHNRLGHVASDIVSKVMNTCNVA-SGKYKSTVCSDCQLAKSHRLP 349


>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
          Length = 1083

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D  T   L QG + NGLY F +  N K        + N    +S +++   +K    + 
Sbjct: 333 KDLHTKKVLAQGKLENGLYRFPVLNNKK---VAFVGATNSSTFYSHNSSIFDNK----VK 385

Query: 147 IWHSRLGHASLDIVIHALKSCNIPY---SNDINESICSSCLMSKSHRLPYH 4
           +WH RLGHAS DIV   ++SCN+ +    N +  + CSSC ++KSHRLP H
Sbjct: 386 LWHYRLGHASTDIVTQIMQSCNVSFEKNKNXVCSTXCSSCQLAKSHRLPTH 436


>emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]
          Length = 1087

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 39/106 (36%), Positives = 57/106 (53%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D+ T   L QG + NGLY F + +N K    P S   N    HS   + + +K      
Sbjct: 244 KDRHTKMVLAQGKLENGLYKFPMFSNKK----PYSSINNASAFHSHFXSTVENKA----E 295

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
           +WH+RLGHA+ DIV   + +CN+  S     ++C  C ++KSHRLP
Sbjct: 296 LWHNRLGHAASDIVSKVMNTCNVA-SRKYKSTVCFDCQLAKSHRLP 340


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -3

Query: 345 ST*AMGQDQATGATLLQGTVN-NGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHS 169
           ST  + + Q +  TLL G V  +GLY F       S+  P  PS      H++S+N++  
Sbjct: 61  STFCLVKSQDSNETLLLGVVGPDGLYQFP------SLLLPRHPSAVLPSAHTVSSNSV-- 112

Query: 168 KKVPSLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
               S A WHSRLGHA  D++    K CN P  N      C+SC + KSH+LP
Sbjct: 113 ----SYATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLP 161


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -3

Query: 345 ST*AMGQDQATGATLLQGTVN-NGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHS 169
           ST  + + Q +  TLL G V  +GLY F       S+  P  PS      H++S+N++  
Sbjct: 82  STFCLVKSQDSNETLLLGVVGPDGLYQFP------SLLLPRHPSAVLPSAHTVSSNSV-- 133

Query: 168 KKVPSLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
               S A WHSRLGHA  D++    K CN P  N      C+SC + KSH+LP
Sbjct: 134 ----SYATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLP 182


>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
          Length = 1198

 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D  T   L QG + NGLY F +  NSK +      + N    +S +++   +K    + 
Sbjct: 333 KDLHTKKVLAQGKLENGLYRFPV-LNSKKVA--FVGAINSSTFYSHNSSIFDNK----VK 385

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDIN-------ESICSSCLMSKSHRLPYH 4
           +WH RLGHAS +IV   ++SCN+ +  + N        ++CSSC ++KSHRLP H
Sbjct: 386 LWHHRLGHASTNIVTQIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRLPTH 440


>gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indica Group]
          Length = 178

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D+AT  T+L+G     LYS            P SP           A  +H+   PS +
Sbjct: 57  KDRATRNTILKGRCRRRLYSL-----------PTSP-----------AKQVHAATTPSFS 94

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDIN-ESICSSCLMSKSHRLPYHK 1
            WHSRLGH ++ IV   L   N+P S   N +SIC +C   KSH+LPY K
Sbjct: 95  RWHSRLGHPAVPIVTRVLSKNNLPCSTIANKDSICDACQKGKSHQLPYPK 144


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAP---VSPSFNQGRRHSLSANAIHSKKVP 157
           +DQ T   LLQG++ +GLY F     ++ +P+P   VS S+++    SL+          
Sbjct: 471 KDQVTKKILLQGSLEHGLYRFP----ARFVPSPAAFVSSSYDRSSNLSLTTTT------- 519

Query: 156 SLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPYH 4
              +WHSRLGH + +I+ H L SCNI +    N ++C +C  +KSH+LP++
Sbjct: 520 --TLWHSRLGHPADNILKHILTSCNISHQCHKN-NVCCACQFAKSHKLPFN 567


>gb|KYP38376.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 39/99 (39%), Positives = 52/99 (52%)
 Frame = -3

Query: 303 LLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLAIWHSRLGH 124
           +LQG + + LY F    + K+I A            S S  + HS    S  +WHSRLGH
Sbjct: 1   ILQGKIKDSLYVFPRFHHLKTISA-----------FSTSKGSAHS----SFQLWHSRLGH 45

Query: 123 ASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPY 7
            S  IV   LKSCN+P + + +   C SC M KSH+LP+
Sbjct: 46  PSPRIVNTVLKSCNMPIAKNSDSFFCQSCCMGKSHQLPF 84


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 39/107 (36%), Positives = 60/107 (56%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +DQ T A LL+G ++ GLYS         +P+  S    Q R   + + +  S  + S+ 
Sbjct: 460 KDQKTQAILLKGGLDKGLYS---------VPSAYSSHAPQARVFQIFSTS-SSTSIDSMR 509

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPY 7
           +WH+RLGH SL IV   L   N+P  +  N+ +C SC ++KSH+LP+
Sbjct: 510 LWHNRLGHPSLAIVNKVLNHYNLPVFSLQNKLLCDSCQLAKSHKLPF 556


>gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 546

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = -3

Query: 327 QDQATGATLLQGTVN-NGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSL 151
           + Q +  TLL G V  +GLY F       S+  P  P       H++S+N++      S 
Sbjct: 391 KSQDSNETLLHGVVGPDGLYQFP------SLLLPRQPPAVLPFVHTVSSNSV------SY 438

Query: 150 AIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPYH 4
           A WHSRLGHA  D++    K CN P  N      C+SC + KSH+LP H
Sbjct: 439 ATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKLPSH 487


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAP---VSPSFNQGRRHSLSANAIHSKKVP 157
           +DQ T   LLQG++ +GLY F     ++ +P+P   VS S+++    SL+          
Sbjct: 123 KDQVTKKILLQGSLEHGLYRFP----ARFVPSPTAFVSSSYDRSSNISLTTIT------- 171

Query: 156 SLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPYH 4
              +WHSRLGH + +I+ H L SCNI +    N ++C +C  +KSH+LP++
Sbjct: 172 --TLWHSRLGHPADNILKHILTSCNISHQCHKN-NVCCACQFAKSHKLPFN 219


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
 Frame = -3

Query: 327  QDQATGATLLQGTVNNGLYSFQLST--NSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPS 154
            +DQ T   LL+G   NGLY    S+   SK +   + P+ ++                  
Sbjct: 1374 KDQVTKNLLLRGPCRNGLYPLPTSSLATSKQVLGAIKPTMSR------------------ 1415

Query: 153  LAIWHSRLGHASLDIVIHALKSCNIPYSNDINES-ICSSCLMSKSHRLPYHK 1
               WHSRLGH SL IV   + S N+P   D+NES +C++C  +KSH+LPY K
Sbjct: 1416 ---WHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAKSHQLPYPK 1464


>ref|XP_012468746.1| PREDICTED: uncharacterized protein LOC105786816 [Gossypium
           raimondii]
          Length = 565

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 37/107 (34%), Positives = 57/107 (53%)
 Frame = -3

Query: 327 QDQATGATLLQGTVNNGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHSKKVPSLA 148
           +D  T  TLL+G ++ GLY FQ S          S S N       S+  ++S +  ++ 
Sbjct: 46  KDIQTRKTLLEGHMHEGLYRFQFSK---------STSNNGSSGLKSSSCLVNSVQFSTVT 96

Query: 147 IWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLPY 7
           +WHSRLGH   +++ H LKSC +P+       IC+S  M K+ +LP+
Sbjct: 97  LWHSRLGHPCSNVLAHVLKSCKVPFVQSRLARICTSYQMGKAQKLPF 143


>gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]
          Length = 287

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
 Frame = -3

Query: 345 ST*AMGQDQATGATLLQGTVN-NGLYSFQLSTNSKSIPAPVSPSFNQGRRHSLSANAIHS 169
           ST    + Q +  TLL G V  +GLY F      +  PA +  S      H++S+N++  
Sbjct: 101 STFCSVKSQDSNETLLHGVVGPDGLYQFPSLLLPRQPPAVLPSS------HTVSSNSV-- 152

Query: 168 KKVPSLAIWHSRLGHASLDIVIHALKSCNIPYSNDINESICSSCLMSKSHRLP 10
               S A WHSRLGHA  D++    K CN P  N      C+SC   KSH+LP
Sbjct: 153 ----SYATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCPGKSHKLP 201