BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00001057
         (1461 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Ery...   464   e-172
ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isof...   455   e-169
ref|XP_011084350.1| PREDICTED: RNA pseudouridine synthase 5 isof...   455   e-157
ref|XP_011084349.1| PREDICTED: RNA pseudouridine synthase 5 isof...   455   e-156
ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isof...   378   e-141
ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isof...   372   e-140
ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isof...   372   e-139
ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cic...   366   e-139
ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isof...   365   e-138
ref|XP_003591952.2| pseudouridine synthase Rlu family protein [M...   362   e-137
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5 [Gly...   355   e-137
ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isof...   365   e-136
gb|KYP74712.1| RNA pseudourine synthase 5 [Cajanus cajan]             356   e-136
ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isof...   365   e-136
ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isof...   378   e-136
ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phas...   350   e-135
gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]   363   e-135
emb|CDO99732.1| unnamed protein product [Coffea canephora]            361   e-135
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   363   e-135
ref|XP_012086507.1| PREDICTED: RNA pseudouridine synthase 5 [Jat...   353   e-134

>ref|XP_012834924.1| PREDICTED: RNA pseudouridine synthase 5 [Erythranthe guttata]
           gi|604335938|gb|EYU39826.1| hypothetical protein
           MIMGU_mgv1a008941mg [Erythranthe guttata]
          Length = 357

 Score =  464 bits (1193), Expect(2) = e-172
 Identities = 229/261 (87%), Positives = 243/261 (93%)
 Frame = +2

Query: 68  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 247
           MVSFG+PWPEFNDGIYYRDLLRPSD GATLI+FYSRKY+SSAPLHGWLQRIHNKQIT++G
Sbjct: 1   MVSFGDPWPEFNDGIYYRDLLRPSDDGATLIEFYSRKYQSSAPLHGWLQRIHNKQITVNG 60

Query: 248 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 427
            VVTDP  ILRGG ELVYHRLPWKEPDAP+L+EILYED+DVIALNKPSGLQVLPGGLFQQ
Sbjct: 61  GVVTDPNTILRGGAELVYHRLPWKEPDAPHLVEILYEDDDVIALNKPSGLQVLPGGLFQQ 120

Query: 428 RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 607
           RTVLTQLQRH     A G QEPHPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121 RTVLTQLQRH-----AGGCQEPHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSV 175

Query: 608 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 787
           VGVCR ND QQK+TRNITKLYRALASG+IIEDEV IDQPIGLVKYPGVA GLYVASPSGK
Sbjct: 176 VGVCRENDQQQKSTRNITKLYRALASGIIIEDEVVIDQPIGLVKYPGVANGLYVASPSGK 235

Query: 788 PALSKVVVLERNLLSNSTLVQ 850
           PA SKVVVLERN+L+NSTLVQ
Sbjct: 236 PAWSKVVVLERNMLNNSTLVQ 256



 Score =  172 bits (437), Expect(2) = e-172
 Identities = 77/90 (85%), Positives = 85/90 (94%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIGHPL+GDPLYST GQPK SDHE VD+SFA+DGGYERPEKPVP
Sbjct: 257  VEIQSGRPHQIRIHLSFIGHPLIGDPLYSTGGQPKCSDHELVDQSFAEDGGYERPEKPVP 316

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLP 1130
            GDCGYHLHAH V+F+HP++NEI EI+APLP
Sbjct: 317  GDCGYHLHAHRVLFTHPVSNEIIEITAPLP 346


>ref|XP_011084348.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Sesamum
           indicum]
          Length = 380

 Score =  455 bits (1171), Expect(2) = e-169
 Identities = 223/261 (85%), Positives = 239/261 (91%)
 Frame = +2

Query: 68  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 247
           MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1   MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 248 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 427
           C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61  CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 428 RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 607
           RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121 RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 608 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 787
           VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181 VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 788 PALSKVVVLERNLLSNSTLVQ 850
           PALSKVVVLER++L  STLVQ
Sbjct: 241 PALSKVVVLERDMLRKSTLVQ 261



 Score =  169 bits (428), Expect(2) = e-169
 Identities = 78/101 (77%), Positives = 88/101 (87%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIH+SFIGHPLVGDPLY T GQPK S+HE V++SFA+DGGYERP KPVP
Sbjct: 262  VEIQSGRPHQIRIHVSFIGHPLVGDPLYGTGGQPKCSNHEVVNQSFAEDGGYERPGKPVP 321

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKA 1163
            GDCGYHLHAH +VF HP+TNEI +I++PLP  L T EES A
Sbjct: 322  GDCGYHLHAHRLVFPHPVTNEIIKITSPLPSILLTTEESNA 362


>ref|XP_011084350.1| PREDICTED: RNA pseudouridine synthase 5 isoform X3 [Sesamum
           indicum]
          Length = 288

 Score =  455 bits (1171), Expect = e-157
 Identities = 223/261 (85%), Positives = 239/261 (91%)
 Frame = +2

Query: 68  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 247
           MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1   MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 248 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 427
           C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61  CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 428 RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 607
           RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121 RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 608 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 787
           VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181 VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 788 PALSKVVVLERNLLSNSTLVQ 850
           PALSKVVVLER++L  STLVQ
Sbjct: 241 PALSKVVVLERDMLRKSTLVQ 261


>ref|XP_011084349.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Sesamum
           indicum]
          Length = 301

 Score =  455 bits (1171), Expect = e-156
 Identities = 223/261 (85%), Positives = 239/261 (91%)
 Frame = +2

Query: 68  MVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 247
           MVSFGEPWPEFNDGIYYRDL+R S +GATLI+FYSRKY+SSAPLHGWLQRIHNKQITIDG
Sbjct: 1   MVSFGEPWPEFNDGIYYRDLVRASGSGATLIEFYSRKYESSAPLHGWLQRIHNKQITIDG 60

Query: 248 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 427
           C+ TDP  ILR G ELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ
Sbjct: 61  CLATDPNTILREGAELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 120

Query: 428 RTVLTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 607
           RTVLTQLQ  A NLT SG QE HPVPVHRLGRGTSG+LLCAKTK+AKSRLAAFFADGTS 
Sbjct: 121 RTVLTQLQLRAGNLTTSGCQEAHPVPVHRLGRGTSGILLCAKTKLAKSRLAAFFADGTSN 180

Query: 608 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 787
           VG+ R ND QQKA R+ITK+YRAL SG+IIEDE+ I+QPIGLV+YPGVAKGLYVASPSGK
Sbjct: 181 VGIYRRNDPQQKAGRSITKIYRALVSGIIIEDEIIIEQPIGLVRYPGVAKGLYVASPSGK 240

Query: 788 PALSKVVVLERNLLSNSTLVQ 850
           PALSKVVVLER++L  STLVQ
Sbjct: 241 PALSKVVVLERDMLRKSTLVQ 261


>ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
           tomentosiformis]
          Length = 381

 Score =  378 bits (970), Expect(2) = e-141
 Identities = 191/260 (73%), Positives = 218/260 (83%), Gaps = 2/260 (0%)
 Frame = +2

Query: 77  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 256
           FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16  FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 257 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 436
           T P   LR G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76  TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 437 LTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 610
           LTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+GTS V
Sbjct: 136 LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 611 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 790
              +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 196 -EDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 791 ALSKVVVLERNLLSNSTLVQ 850
           ALS V VLER+L +NSTLVQ
Sbjct: 255 ALSSVHVLERDLENNSTLVQ 274



 Score =  155 bits (391), Expect(2) = e-141
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E +DESF +DGGY+RPE PVP
Sbjct: 275  VEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVP 334

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAKK 1169
            GDCGY+LHAH +V  HP+TNE+ +I+APLP  L T EE KA +
Sbjct: 335  GDCGYNLHAHQIVLIHPITNELIKITAPLPSILQTREERKANQ 377


>ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
           sylvestris]
          Length = 384

 Score =  372 bits (956), Expect(2) = e-140
 Identities = 191/266 (71%), Positives = 218/266 (81%), Gaps = 2/266 (0%)
 Frame = +2

Query: 59  ATKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQIT 238
           A +   FGE W EFNDG+ Y D++R  DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT
Sbjct: 13  AAETAYFGETWREFNDGLTYHDIVRRIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQIT 72

Query: 239 IDGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGL 418
           +DG VVT P   LR G ELVYHRLPW+EPDAPYLL++L+EDN +IALNKPSGLQVLPGGL
Sbjct: 73  VDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLPGGL 132

Query: 419 FQQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFA 592
           FQQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA
Sbjct: 133 FQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFA 192

Query: 593 DGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVA 772
           +GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVA
Sbjct: 193 EGTSVV-EDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGLYVA 251

Query: 773 SPSGKPALSKVVVLERNLLSNSTLVQ 850
           SPSGKPALS V VLER+L +NSTLVQ
Sbjct: 252 SPSGKPALSSVRVLERDLENNSTLVQ 277



 Score =  155 bits (393), Expect(2) = e-140
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E +DESF +DGGY+RPE PVP
Sbjct: 278  VEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVP 337

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAKK 1169
            GDCGY+LHAH +V  HP+TNE+ +I+APLP  L T EE KA +
Sbjct: 338  GDCGYNLHAHQIVLIHPITNELIQITAPLPSILQTREEGKANQ 380


>ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isoform X5 [Nicotiana
           tomentosiformis]
          Length = 386

 Score =  372 bits (954), Expect(2) = e-139
 Identities = 191/265 (72%), Positives = 218/265 (82%), Gaps = 7/265 (2%)
 Frame = +2

Query: 77  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 256
           FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16  FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 257 TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           T P   L     R G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLF
Sbjct: 76  TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 422 QQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 595
           QQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+
Sbjct: 136 QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 596 GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 775
           GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 196 GTSVV-EDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVAS 254

Query: 776 PSGKPALSKVVVLERNLLSNSTLVQ 850
           PSGKPALS V VLER+L +NSTLVQ
Sbjct: 255 PSGKPALSSVHVLERDLENNSTLVQ 279



 Score =  155 bits (391), Expect(2) = e-139
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E +DESF +DGGY+RPE PVP
Sbjct: 280  VEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVP 339

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAKK 1169
            GDCGY+LHAH +V  HP+TNE+ +I+APLP  L T EE KA +
Sbjct: 340  GDCGYNLHAHQIVLIHPITNELIKITAPLPSILQTREERKANQ 382


>ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cicer arietinum]
          Length = 368

 Score =  366 bits (939), Expect(2) = e-139
 Identities = 182/264 (68%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
 Frame = +2

Query: 62  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 241
           ++    G PWPE NDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2   SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61

Query: 242 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           D  VVTDP  +LR G +LVYHRLPWKEPDAP+ +++LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 62  DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121

Query: 422 QQRTVLTQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 598
           QQRTVLTQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A+  LA++FADG
Sbjct: 122 QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 599 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 778
           TS +G  R  DT Q+  + I K+YRAL SG+I  D+V IDQPIG+VKYPGVAKGLYVAS 
Sbjct: 182 TSRIGGKR--DTNQELGK-IAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 779 SGKPALSKVVVLERNLLSNSTLVQ 850
           SGKPALS V +LERN+  NSTLVQ
Sbjct: 239 SGKPALSVVDILERNVKENSTLVQ 262



 Score =  158 bits (399), Expect(2) = e-139
 Identities = 71/100 (71%), Positives = 85/100 (85%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D++ +D+SFA+DGGY RP KPVP
Sbjct: 263  VKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKCLDYDFLDDSFAEDGGYPRPPKPVP 322

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGY+LHAH ++ +HP+TNEI EI APLP  L T EE+K
Sbjct: 323  GDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTHEEAK 362


>ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
           sylvestris]
          Length = 393

 Score =  365 bits (936), Expect(2) = e-138
 Identities = 191/275 (69%), Positives = 218/275 (79%), Gaps = 11/275 (4%)
 Frame = +2

Query: 59  ATKMVSFGEPWPEFNDGIYYRDLLRPSDAG---------ATLIDFYSRKYKSSAPLHGWL 211
           A +   FGE W EFNDG+ Y D++R  DAG          TLI+FYSRKYKSSAPL GWL
Sbjct: 13  AAETAYFGETWREFNDGLTYHDIVRRIDAGFLFCAKSTGLTLIEFYSRKYKSSAPLQGWL 72

Query: 212 QRIHNKQITIDGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPS 391
           QRI NKQIT+DG VVT P   LR G ELVYHRLPW+EPDAPYLL++L+EDN +IALNKPS
Sbjct: 73  QRIQNKQITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPS 132

Query: 392 GLQVLPGGLFQQRTVLTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIA 565
           GLQVLPGGLFQQRTVLTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+A
Sbjct: 133 GLQVLPGGLFQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLA 192

Query: 566 KSRLAAFFADGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYP 745
           KSRLAA+FA+GTS V   +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYP
Sbjct: 193 KSRLAAYFAEGTSVV-EDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYP 251

Query: 746 GVAKGLYVASPSGKPALSKVVVLERNLLSNSTLVQ 850
           GVAKGLYVASPSGKPALS V VLER+L +NSTLVQ
Sbjct: 252 GVAKGLYVASPSGKPALSSVRVLERDLENNSTLVQ 286



 Score =  155 bits (393), Expect(2) = e-138
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E +DESF +DGGY+RPE PVP
Sbjct: 287  VEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVP 346

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAKK 1169
            GDCGY+LHAH +V  HP+TNE+ +I+APLP  L T EE KA +
Sbjct: 347  GDCGYNLHAHQIVLIHPITNELIQITAPLPSILQTREEGKANQ 389


>ref|XP_003591952.2| pseudouridine synthase Rlu family protein [Medicago truncatula]
           gi|657404949|gb|AES62203.2| pseudouridine synthase Rlu
           family protein [Medicago truncatula]
          Length = 370

 Score =  362 bits (928), Expect(2) = e-137
 Identities = 183/259 (70%), Positives = 212/259 (81%), Gaps = 2/259 (0%)
 Frame = +2

Query: 80  GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 259
           G PWPEFNDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+D  VVT
Sbjct: 8   GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 260 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 439
           DP  ILR G +LVYHR+PWKEPDAP+ +E+LYED+D+IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68  DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 440 TQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV-G 613
           TQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS + G
Sbjct: 128 TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187

Query: 614 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 793
               N    K    I K+YRAL SG+I  D+V I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 188 KGHTNQELGK----IAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPA 243

Query: 794 LSKVVVLERNLLSNSTLVQ 850
           LS V VLERN+  NSTLVQ
Sbjct: 244 LSVVHVLERNVKENSTLVQ 262



 Score =  157 bits (397), Expect(2) = e-137
 Identities = 73/102 (71%), Positives = 84/102 (82%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+IQSGRPHQIRIHLSFIGHPL+GDPLY+  GQPK  D + +DESFA+DGGY RP KPVP
Sbjct: 263  VKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAEDGGYTRPSKPVP 322

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAK 1166
            GDCGYHLHAH +  SHP+TNEI E+ APLP  L T EE+ A+
Sbjct: 323  GDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEAIAQ 364


>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5 [Glycine max]
           gi|734312650|gb|KHN00828.1| RNA pseudourine synthase 5
           [Glycine soja] gi|947042144|gb|KRG91868.1| hypothetical
           protein GLYMA_20G178400 [Glycine max]
          Length = 371

 Score =  355 bits (910), Expect(2) = e-137
 Identities = 179/264 (67%), Positives = 216/264 (81%), Gaps = 1/264 (0%)
 Frame = +2

Query: 62  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 241
           T    FG PWPE NDG+ Y D++R SDAGATLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2   TSRKKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITV 61

Query: 242 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           DG VVTD   +LR G +L+YHRLPWKEPDAP+++++LYED+D+IALNKPSGLQVLPGGL+
Sbjct: 62  DGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLY 121

Query: 422 QQRTVLTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 598
           QQRT+LTQLQ  A+N  T   ++  HPVPVHRLGRGTSG+LLCAKTK+A++RLA+ FADG
Sbjct: 122 QQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADG 181

Query: 599 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 778
           TS VG  R  DT+Q+  + I K+YRAL SG++  D+V I+QPIG+VKYPGVAKGLYVAS 
Sbjct: 182 TSHVGGKR--DTKQELGK-IAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASE 238

Query: 779 SGKPALSKVVVLERNLLSNSTLVQ 850
           SGKPALS V +LE N+  NSTLVQ
Sbjct: 239 SGKPALSVVDILETNIQENSTLVQ 262



 Score =  163 bits (412), Expect(2) = e-137
 Identities = 75/100 (75%), Positives = 84/100 (84%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+IQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D + VDESFA+DGGY+RP KPVP
Sbjct: 263  VKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAEDGGYQRPTKPVP 322

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGY+LHAH +V SHP TNE+ EI APLP  LHT EE+K
Sbjct: 323  GDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAK 362


>ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera]
          Length = 393

 Score =  365 bits (936), Expect(2) = e-136
 Identities = 178/260 (68%), Positives = 216/260 (83%), Gaps = 1/260 (0%)
 Frame = +2

Query: 74  SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 253
           +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4   TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 254 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 433
           VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64  VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 434 VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 610
           VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124 VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 611 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 790
           G  R  D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184 GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 791 ALSKVVVLERNLLSNSTLVQ 850
           ALSKV +LER++  +  +VQ
Sbjct: 244 ALSKVSILERDVQGDHMIVQ 263



 Score =  152 bits (383), Expect(2) = e-136
 Identities = 71/100 (71%), Positives = 80/100 (80%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E  +ES+A DGGY+RP KPVP
Sbjct: 264  VEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYALDGGYQRPVKPVP 323

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGYHLHAH +V SHP TNE+ +I+APLP  L T  E +
Sbjct: 324  GDCGYHLHAHQLVLSHPTTNEVIKITAPLPPVLRTRGEEE 363


>gb|KYP74712.1| RNA pseudourine synthase 5 [Cajanus cajan]
          Length = 371

 Score =  356 bits (913), Expect(2) = e-136
 Identities = 176/259 (67%), Positives = 213/259 (82%), Gaps = 1/259 (0%)
 Frame = +2

Query: 77  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 256
           FG PWP+ NDG+ Y D++ PSDAG TL+ FYS  YKSSAPL GWLQRI + QIT+DG VV
Sbjct: 7   FGIPWPDCNDGLSYDDVVSPSDAGLTLLQFYSTNYKSSAPLQGWLQRIKSGQITVDGSVV 66

Query: 257 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 436
           TD   +LR   +LVYHRLPWKEP+AP+++E+LYED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67  TDSDTVLRVASKLVYHRLPWKEPEAPHMIEVLYEDDDMIALNKPSGLQVLPGGLFQQRTV 126

Query: 437 LTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 613
           LTQLQ   +N  +   ++ PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G
Sbjct: 127 LTQLQWECNNQGSCEMHKRPHPVPVHRLGRGTSGILLCAKTKVARARLASYFADGTSHIG 186

Query: 614 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 793
           V R  DT QK  + I K+YRAL SG++  D++ I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 187 VKR--DTNQKIGK-IAKIYRALVSGIVENDKMTINQPIGIVKYPGVAKGLYVASQSGKPA 243

Query: 794 LSKVVVLERNLLSNSTLVQ 850
           LS V +LERN+  NSTLVQ
Sbjct: 244 LSAVEILERNIQENSTLVQ 262



 Score =  160 bits (406), Expect(2) = e-136
 Identities = 73/100 (73%), Positives = 83/100 (83%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+IQSGRPHQIRIHLSFIGHPL+GDPLY  DGQPK  D + +DESFA+DGGY+RP KPVP
Sbjct: 263  VKIQSGRPHQIRIHLSFIGHPLLGDPLYGVDGQPKCLDCDFIDESFAEDGGYQRPTKPVP 322

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGYHLHAH +  SHP+TNE+ EI APLP  L T +E K
Sbjct: 323  GDCGYHLHAHKLFLSHPITNELVEIIAPLPTVLQTPDEVK 362


>ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Gossypium
           raimondii] gi|763800749|gb|KJB67704.1| hypothetical
           protein B456_010G204900 [Gossypium raimondii]
          Length = 382

 Score =  365 bits (938), Expect(2) = e-136
 Identities = 181/265 (68%), Positives = 213/265 (80%), Gaps = 2/265 (0%)
 Frame = +2

Query: 62  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 241
           T+ + FG PWPE NDG++Y D++  SD+  TLIDFYSRKYK+SAPL GWLQRI N QI++
Sbjct: 7   TQSLVFGIPWPELNDGLFYSDVVPHSDSELTLIDFYSRKYKNSAPLQGWLQRIQNGQISV 66

Query: 242 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           DG VV DP  IL G   LVYHRLPWKEPD P+LLE+LYED+D++ALNKPSGLQVLPGGLF
Sbjct: 67  DGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLF 126

Query: 422 QQRTVLTQL--QRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 595
           QQRTVLTQL       N T +  QE HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FAD
Sbjct: 127 QQRTVLTQLCWSVKKQNSTLNS-QETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFAD 185

Query: 596 GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 775
           GTS VG        +  TR I+K+YRAL +G++++D+V IDQPIG+V+YPGVAKGLYVAS
Sbjct: 186 GTSLVGATSNRKAARSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVAKGLYVAS 245

Query: 776 PSGKPALSKVVVLERNLLSNSTLVQ 850
           PSGKPALSKV VLER+   N TLVQ
Sbjct: 246 PSGKPALSKVEVLERDEKQNCTLVQ 270



 Score =  149 bits (377), Expect(2) = e-136
 Identities = 69/99 (69%), Positives = 80/99 (80%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEI+SGRPHQIRIHLSFIGHPL+GDPLY   G+P+  D E VDESFAQDGGY+RP  PVP
Sbjct: 271  VEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGEPRCFDPELVDESFAQDGGYQRPTNPVP 330

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEES 1157
            GDCGY+LHAH +V SHP TNE+  I+APL   L T +E+
Sbjct: 331  GDCGYYLHAHRLVLSHPTTNEMIYITAPLSTILQTSDEA 369


>ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
           tomentosiformis]
          Length = 436

 Score =  378 bits (970), Expect(2) = e-136
 Identities = 191/260 (73%), Positives = 218/260 (83%), Gaps = 2/260 (0%)
 Frame = +2

Query: 77  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 256
           FGEPWPEFNDG+ Y D++RP DAG TLI+FYSRKYKSSAPL GWLQRI NKQIT+D  VV
Sbjct: 16  FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 257 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 436
           T P   LR G ELVYHRLPW+EPDAPYLL++L+ED+ +IALNKPSGLQVLPGGLFQQRTV
Sbjct: 76  TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 437 LTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 610
           LTQLQ H   LT  +SG ++ HPVPVHRLGRGTSG+LLCAKTK+AKSRLAA+FA+GTS V
Sbjct: 136 LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 611 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 790
              +  +++ K  R I+K+YRAL SGVI  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 196 -EDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKP 254

Query: 791 ALSKVVVLERNLLSNSTLVQ 850
           ALS V VLER+L +NSTLVQ
Sbjct: 255 ALSSVHVLERDLENNSTLVQ 274



 Score =  137 bits (344), Expect(2) = e-136
 Identities = 61/81 (75%), Positives = 69/81 (85%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIG PL+GDPLY + GQPK  D E +DESF +DGGY+RPE PVP
Sbjct: 275  VEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVP 334

Query: 1041 GDCGYHLHAHHVVFSHPLTNE 1103
            GDCGY+LHAH +V  HP+TNE
Sbjct: 335  GDCGYNLHAHQIVLIHPITNE 355


>ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
           gi|561016875|gb|ESW15679.1| hypothetical protein
           PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  350 bits (897), Expect(2) = e-135
 Identities = 179/258 (69%), Positives = 213/258 (82%)
 Frame = +2

Query: 77  FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 256
           FG PWPE NDG+ Y D++R SD+G TLI+FY  KYKSSAPL GWLQRI + QIT DG VV
Sbjct: 7   FGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGRVV 66

Query: 257 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 436
           TD   +LR G +LVYHRLPWKEPDAP+++E+LYED+++IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67  TDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTV 126

Query: 437 LTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 616
           LTQLQ  A NL    +++PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G 
Sbjct: 127 LTQLQWEA-NL----HKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGG 181

Query: 617 CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 796
            R  DT  +  + I K+YR LASG++  DEV I+QPIG+VKYPGVAKGLYVAS SGKPAL
Sbjct: 182 KR--DTNGEIGK-IAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPAL 238

Query: 797 SKVVVLERNLLSNSTLVQ 850
           S V +LERN+  NSTLVQ
Sbjct: 239 SVVGILERNVQENSTLVQ 256



 Score =  163 bits (412), Expect(2) = e-135
 Identities = 75/100 (75%), Positives = 86/100 (86%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+IQSGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D +S+DESFA+DGGY+RP KPVP
Sbjct: 257  VKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDSIDESFAEDGGYQRPTKPVP 316

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGY+LHAH +V SHPLTNE+ EI+APLP  L T EE+K
Sbjct: 317  GDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEEAK 356


>gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]
          Length = 382

 Score =  363 bits (932), Expect(2) = e-135
 Identities = 178/265 (67%), Positives = 214/265 (80%), Gaps = 2/265 (0%)
 Frame = +2

Query: 62  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 241
           T+ + FG PWPE N+G++Y D++  SD+  TLIDFYSRKYK+SAP+ GWLQRI N QI++
Sbjct: 7   TQSLVFGIPWPELNEGLFYSDVVPHSDSELTLIDFYSRKYKNSAPIQGWLQRIQNGQISV 66

Query: 242 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           DG VV DP  IL G   LVYHRLPWKEPD P+LLE+LYED+D++ALNKPSGLQVLPGGLF
Sbjct: 67  DGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLF 126

Query: 422 QQRTVLTQL--QRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 595
           QQRTVLTQL       N T +  QE HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FAD
Sbjct: 127 QQRTVLTQLCWSVKKQNSTLNS-QETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFAD 185

Query: 596 GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 775
           GTS VG       ++  TR I+K+YRAL +G++++D+V IDQPIG+V+YPGVA+GLYVAS
Sbjct: 186 GTSRVGATSNRKAERSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVARGLYVAS 245

Query: 776 PSGKPALSKVVVLERNLLSNSTLVQ 850
           PSGKPALSKV VLER+   N TLVQ
Sbjct: 246 PSGKPALSKVEVLERDEKQNCTLVQ 270



 Score =  149 bits (375), Expect(2) = e-135
 Identities = 69/99 (69%), Positives = 80/99 (80%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEI+SGRPHQIRIHLSFIGHPL+GDPLY   GQP+  D E VDESFAQDGGY+RP  PVP
Sbjct: 271  VEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDPELVDESFAQDGGYQRPTNPVP 330

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEES 1157
            GDCGY+LHA+ +V SHP TNE+  I+APL   L T +E+
Sbjct: 331  GDCGYYLHAYQLVLSHPTTNEMISITAPLSSILQTSDEA 369


>emb|CDO99732.1| unnamed protein product [Coffea canephora]
          Length = 416

 Score =  361 bits (927), Expect(2) = e-135
 Identities = 186/299 (62%), Positives = 222/299 (74%), Gaps = 38/299 (12%)
 Frame = +2

Query: 68  MVSFGEPWPEFNDGIYYRDLLRPSDAGA-------------------------------- 151
           +++FGEPWP+ NDG+ YRDL+ P  AG                                 
Sbjct: 18  IMTFGEPWPDLNDGLTYRDLIPPPHAGPYQPSQSFTYMRLIMFLALLTIFRSLFFIFWLP 77

Query: 152 ------TLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVTDPKIILRGGEELVYHRLP 313
                 T+I++YS+KYK+SAP+ GWLQRI NKQI +DG V+TDP  ILR G ELVYHRLP
Sbjct: 78  NNLTGLTVIEYYSKKYKNSAPVQGWLQRIKNKQIKVDGAVITDPNTILRAGSELVYHRLP 137

Query: 314 WKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVLTQLQRHADNLTASGYQEP 493
           WKEP APYLLE+L+EDND+IALNKPSGLQVLPGGLFQQRTVL+QL+   +  T+S  ++P
Sbjct: 138 WKEPHAPYLLEVLFEDNDLIALNKPSGLQVLPGGLFQQRTVLSQLEWRTNKGTSS-CKQP 196

Query: 494 HPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVCRMNDTQQKATRNITKLYR 673
           H VPVHRLGRGTSGVLLCAKTK+AKS LAA+FADGTSAVG    N+ +  +TR I+K YR
Sbjct: 197 HAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAVGNESCNNARFNSTRKISKFYR 256

Query: 674 ALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALSKVVVLERNLLSNSTLVQ 850
           AL SG+I +D+V IDQPIGLVKYPGVAKGLYVAS SGKPALSKV +LERN+ ++STLVQ
Sbjct: 257 ALVSGIIHQDQVVIDQPIGLVKYPGVAKGLYVASASGKPALSKVSILERNVKNSSTLVQ 315



 Score =  150 bits (379), Expect(2) = e-135
 Identities = 70/100 (70%), Positives = 78/100 (78%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEIQSGRPHQIRIHLSFIGHPL+GDPLY   GQP   D E +DE FAQDGGY+RPE PVP
Sbjct: 316  VEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPSCFDPEFIDEGFAQDGGYQRPENPVP 375

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1160
            GDCGYHLHAH +  +HP T+E  +I APLP  L T EE +
Sbjct: 376  GDCGYHLHAHQLFLAHPTTHEPIKIVAPLPSILATEEECR 415


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508726697|gb|EOY18594.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 378

 Score =  363 bits (932), Expect(2) = e-135
 Identities = 180/264 (68%), Positives = 212/264 (80%), Gaps = 1/264 (0%)
 Frame = +2

Query: 62  TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 241
           T+ + FG PWPE NDG++Y D+++PSD+  TLI+FYS KYK+SAP  GWLQRI N QI++
Sbjct: 7   TQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISV 66

Query: 242 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 421
           DG VV DP  ILRG  ELVYHRLPWKEPDAP+ LE+LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 67  DGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLF 126

Query: 422 QQRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 598
           QQRTVLTQL       T+S   QE HPVPVHRLGRGTSG+LLCAKTK AK+ LAA+FADG
Sbjct: 127 QQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADG 186

Query: 599 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 778
           TS +G       Q   TR I+K+YRAL +G++ ED+V I+QPIG+V+YPGVAKGLYVASP
Sbjct: 187 TSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASP 246

Query: 779 SGKPALSKVVVLERNLLSNSTLVQ 850
           SGKPALSKV VLE++   N TLVQ
Sbjct: 247 SGKPALSKVEVLEKDEQQNHTLVQ 270



 Score =  148 bits (374), Expect(2) = e-135
 Identities = 67/103 (65%), Positives = 82/103 (79%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            V+I+SGRPHQIRIHLSFIGHPL+GDPLY   GQP+  D E VDE++AQDGGY+RP  PVP
Sbjct: 271  VQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDSEFVDENYAQDGGYQRPVNPVP 330

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKAKK 1169
            GDCGY+LHAH ++ SHP T+EI  I+APLP  L T +E +  +
Sbjct: 331  GDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQDEVRRSR 373


>ref|XP_012086507.1| PREDICTED: RNA pseudouridine synthase 5 [Jatropha curcas]
          Length = 389

 Score =  353 bits (907), Expect(2) = e-134
 Identities = 179/260 (68%), Positives = 207/260 (79%), Gaps = 1/260 (0%)
 Frame = +2

Query: 74  SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 253
           SFG PWP+ NDG++Y D+   SD+  TLIDFYS KY +SAPL GWLQRI N QI+IDG V
Sbjct: 26  SFGLPWPDLNDGLFYSDVASSSDSELTLIDFYSGKYNNSAPLQGWLQRIQNGQISIDGIV 85

Query: 254 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 433
           V +    LR G ELVYHRLPW+EPDAPY+L+ILYED+D+IALNKPS LQVLPGGLFQQRT
Sbjct: 86  VKESNTKLRSGSELVYHRLPWREPDAPYMLQILYEDDDMIALNKPSCLQVLPGGLFQQRT 145

Query: 434 VLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 610
           VLTQLQ  A   T+S   QE HPVPVHRLGRGTSG+LLCAK+K+AK+R+AA+FADGTS V
Sbjct: 146 VLTQLQWWARKQTSSLASQESHPVPVHRLGRGTSGILLCAKSKLAKTRIAAYFADGTSLV 205

Query: 611 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 790
           G      T     R I+K+YRAL  G+I+ED+V I QPIG V+YPGVAKGLYVASPSGKP
Sbjct: 206 GDNSDTGTLLVKRRKISKIYRALVVGIIVEDKVIIKQPIGTVRYPGVAKGLYVASPSGKP 265

Query: 791 ALSKVVVLERNLLSNSTLVQ 850
           ALSKV VLER++  N TLVQ
Sbjct: 266 ALSKVEVLERDVQGNHTLVQ 285



 Score =  156 bits (395), Expect(2) = e-134
 Identities = 71/99 (71%), Positives = 81/99 (81%)
 Frame = +3

Query: 861  VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVDESFAQDGGYERPEKPVP 1040
            VEI+SGRPHQIRIHLSFIGHPL+GDPLY   GQPK  D E VDESFAQDGGY+RP KPVP
Sbjct: 286  VEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPKCFDSEFVDESFAQDGGYQRPTKPVP 345

Query: 1041 GDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEES 1157
            GDCGY+LHAH +   HP TNE+ +++APLP NL T  E+
Sbjct: 346  GDCGYYLHAHQLSLLHPTTNEVIKVTAPLPSNLQTRAEA 384