BLASTX nr result
ID: Rehmannia28_contig00001030
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00001030
(8429 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACH73184.1| replicase polyprotein [Dweet mottle virus] 2037 0.0
ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus... 2033 0.0
gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotc... 2025 0.0
gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotc... 2025 0.0
gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus] 2008 0.0
gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus] 2005 0.0
gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus] 2005 0.0
gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus] 2002 0.0
gb|AKN09002.1| replicase [Apricot vein clearing associated virus] 1243 0.0
gb|AKN08994.1| replicase [Caucasus prunus virus] 1003 0.0
gb|AFA43556.1| replicase polyprotein, partial [Citrus leaf blotc... 962 0.0
gb|AFA43558.1| replicase polyprotein, partial [Citrus leaf blotc... 959 0.0
ref|YP_008997790.1| replication-associated polyprotein [Apricot ... 941 0.0
gb|AKN08998.1| replicase [Apricot vein clearing associated virus] 949 0.0
gb|ACH73185.1| movement protein [Dweet mottle virus] 681 0.0
ref|NP_624334.1| movement protein [Citrus leaf blotch virus] gi|... 679 0.0
gb|ACF94739.1| putative movement protein [Citrus leaf blotch virus] 677 0.0
gb|ACF94741.1| putative movement protein [Citrus leaf blotch virus] 672 0.0
gb|ALZ41788.1| movement protein [Citrus leaf blotch virus] 667 0.0
gb|AFA43528.1| movement protein [Citrus leaf blotch virus] gi|37... 667 0.0
>gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]
Length = 1962
Score = 2037 bits (5278), Expect = 0.0
Identities = 1066/1999 (53%), Positives = 1358/1999 (67%), Gaps = 54/1999 (2%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + IYN A +T++SHSEFRN+HFA++++ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKK-------------- 372
+EL+PNGYLPHSHP SK ENH+L+ VLP V+N + + CSIKE K
Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120
Query: 373 ---LNCVVARQN--ITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGK 537
LN + + N + +N +V +DVSRY E +F + FS K++
Sbjct: 121 VSDLNALNSLNNSHTSFINRLVASKDVSRYTEE--ADAFFQSKKGSPELFSRNFIKSLEN 178
Query: 538 HKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVRD 717
++ FFHDEVHHW K +F FL + +R +FTVVYPPE+L + NSQNPK+Y FK+ +
Sbjct: 179 KEAVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKG 238
Query: 718 KLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITE 897
+LFFFPDGV +E Y+Q N+ WLF +L GD WT+ RH S YAHHLFEI G+L+T+
Sbjct: 239 RLFFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTD 298
Query: 898 DSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQII 1077
LFF+D++ +DM +F +RF+ Y++FP++ H+YKVYSYLLCLKKPD+ESGLAKLRQII
Sbjct: 299 SKLFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQII 358
Query: 1078 GDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSN 1257
GDDVE+KEFLFFEQ CKR IER TS+G+FGHS E L + P+ R WK N
Sbjct: 359 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKN 418
Query: 1258 IFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDD 1437
F+FL+ LGTL + ++R C+ H++E + FEVV D + +LDPL F NENFNE+RVDD
Sbjct: 419 TFEFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDD 478
Query: 1438 GYLERVKLPFFNYKG-DPRKKEV--YHFFSKQLHTESHLRALGCATKPPT--LRICWR-- 1596
GYLER++LPF+N D ++K V Y+ S + E R + A K P L+I W
Sbjct: 479 GYLERIRLPFWNLNDYDLKRKRVNAYNILSYRFEEE---RKIESAQKGPNKMLQIEWYGI 535
Query: 1597 ---TDDPSFVNFAR-----AVIPSNEMDDKKHHDAYTRLMSYLVKSGEMCTSAFISQKFD 1752
DP N + +D KK+ SY S + CT + +
Sbjct: 536 KEFKVDPFISNSITEFTLLEALLGKRIDPKKY--------SY---SKQACTLS----NYL 580
Query: 1753 EFLRPSEYGCDDGLDGEDAKE-LEAPTETRSNEFTLDIDSLLLGCPPESESSDSQITSEL 1929
FL C +GLDG + +E LE + ++ + D + L E + L
Sbjct: 581 TFL------CAEGLDGFNLEEHLERRLKAAGHDISDDEEEELTSA--EQAGPIKILADPL 632
Query: 1930 GIDEREAVSQSP--TQKGMEGNGPIPSNFQ----KLDYSKMFKEVECHASHGRLINVPAD 2091
G +E + + P T+ +E G +++ +++Y+ +F C +HG I P+D
Sbjct: 633 GF-MKECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSD 691
Query: 2092 GNCFFHAITEVYQCTEDHVQMRKNFSEWLLDRD--PYHHLGKLIAKDGVFMEHELIYLFA 2265
GNCFF A TE ++ E +R +FS+WL++ + Y L ++I +GVFME ELIYLF
Sbjct: 692 GNCFFSAFTETFE-VERPDTLRSDFSDWLMEFNGGSYASLAEMIRPNGVFMEAELIYLFC 750
Query: 2266 LSRGLKIVV----HFEDKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRM-NFKLLDNLEG 2430
+ RG+ +++ H ++ ++ G EEGH+ G+HF+ ETY S + + LL ++
Sbjct: 751 VFRGVTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPC 810
Query: 2431 YHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLDAILEICD 2610
+ KF F P+HF C FRGRKAAF+TKV ADYGHNGM+YP N WVPSL+ I++IC
Sbjct: 811 GFSEEITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLEEIIQICG 870
Query: 2611 PDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMED 2790
++N ALI +YE +SLG HRDNE VY D ILTV G F IE ++ F M
Sbjct: 871 QGDDFNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTA 930
Query: 2791 ASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNKCLIVAVA 2970
SFF MP GFQK+ARH V+ RVSITFR HVR ++G I+ +E +N CLI A +
Sbjct: 931 GSFFLMPKGFQKKARHSVSNEMPRVSITFRKHVRRLNGSPIAIREE--NYKNTCLINAFS 988
Query: 2971 GALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMD 3150
A+K S++ + L + N +W ++ G S+EDC E L V +++++N + V+
Sbjct: 989 KAMKRSKQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKYVVLG 1048
Query: 3151 FGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKIS---KCPHYNLL 3321
G I + + NHFS + M R+ SHL +K NV+ ++G E +S N +
Sbjct: 1049 KGALRISMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGFDEMLSGDVGAAGVNKI 1108
Query: 3322 PFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFA 3501
F AN EF ++L SFL TTG+ LG+ LDNG K+F K + I T++ + GFA
Sbjct: 1109 QFAANFEFARILANSFLNMTTGICLGKALDNGEKYFLHILK--DRVKQIGTDVTMVCGFA 1166
Query: 3502 GSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESFIKRERSN 3681
GSGKS+ +Q WL KK +FCVVSPRT L +DW FKL L + KV TFE FIK ++S
Sbjct: 1167 GSGKSRKLQSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSK 1226
Query: 3682 LELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDILTFTHDVD 3861
L+LIVIDE+TLFPNGY+D L+Y+L +++LLFDPLQARYHN+ D+ ILTF HDVD
Sbjct: 1227 LDLIVIDELTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVD 1286
Query: 3862 RLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDE--SDSKIWIVNGPEDIKGSFGERP 4035
RL+ NI Y+Y + R+++ +F+RF D+P + + + ++WI + I +R
Sbjct: 1287 RLIGGQNIEYIYSTHRMSR-YFNRF-FDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQ 1344
Query: 4036 FP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRA 4212
P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TRA
Sbjct: 1345 EPCDVLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRA 1404
Query: 4213 KERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAID 4392
+ R S + LGG+++F K L I+ GEK+ M++ NLI ++ G D
Sbjct: 1405 RTRFSLCSTFLGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRRE-KENGCRD 1463
Query: 4393 EMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDL 4572
E+DREERLEGDPFLKPFIF+GQRI + E E E V I+EP CQTHLYI+EPNF CYNFD
Sbjct: 1464 EVDREERLEGDPFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDF 1523
Query: 4573 IRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVK 4752
IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+MTFWMAV+
Sbjct: 1524 IREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVR 1583
Query: 4753 KRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQ 4932
KRL+FR E+EN +RLS AHL+GGL+Y NFK+ L+F DQGLLE +N FE KKL+KS
Sbjct: 1584 KRLIFREEEENYQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSC 1643
Query: 4933 ATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCR 5112
TIKSHSIRSD+DWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILVQFAPWCR
Sbjct: 1644 GTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCR 1703
Query: 5113 YLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIH 5292
YLE QIR+QLPEEIYIHSNKNFDDLN W KKFF RDICVESDYEAFDA QDEYILSFEIH
Sbjct: 1704 YLETQIRNQLPEEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIH 1763
Query: 5293 LMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRR 5472
LMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFTMCRYEWRR
Sbjct: 1764 LMKDAHFPQKIIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRR 1823
Query: 5473 GQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPEL 5652
GQP+AFAGDDMCALNNL + +DF+++F+ ISLKAKVERTE PMFCGWRLTPYGIVKEPEL
Sbjct: 1824 GQPIAFAGDDMCALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPEL 1883
Query: 5653 VYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHID 5832
VYNRFQVAIEEGKV+ECLENYAIEVSYAY+LSERLYEVLKSERQ+QYHQAVVRFIVTHID
Sbjct: 1884 VYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHID 1943
Query: 5833 KLKTKVKDLFQEQSSDEDI 5889
KLKTKV+DLF EQSSDEDI
Sbjct: 1944 KLKTKVRDLFLEQSSDEDI 1962
>ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus]
gi|81964041|sp|Q91QZ3.1|RDRP_CLBVS RecName: Full=RNA
replication polyprotein; AltName: Full=ORF1 protein;
Includes: RecName: Full=Viral methyltransferase;
Includes: RecName: Full=Putative Fe(2+) 2-oxoglutarate
dioxygenase; Includes: RecName: Full=Protease; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|14270249|emb|CAC39422.1|
hypothetical protein [Citrus leaf blotch virus]
Length = 1962
Score = 2033 bits (5267), Expect = 0.0
Identities = 1064/1999 (53%), Positives = 1356/1999 (67%), Gaps = 54/1999 (2%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + IYN A +T++SHSEFRN+HFA++++ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKK-------------- 372
+EL+PNGYLPHSHP SK ENH+L+ VLP V+N + + CSIKE K
Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120
Query: 373 ---LNCVVARQN--ITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGK 537
LN + + N + +N +V +DVSRY E +F + FS K++
Sbjct: 121 VSDLNALNSLNNSHTSFINRLVASKDVSRYTEE--ADAFFQSKKGSPELFSRNFIKSLEN 178
Query: 538 HKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVRD 717
++ FFHDEVHHW K +F FL + +R +FTVVYPPE+L + NSQNPK+Y FK+ +
Sbjct: 179 KEAVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKG 238
Query: 718 KLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITE 897
+LFFFPDGV +E Y+Q N+ WLF +L GD WT+ RH S YAHHLFEI G+L+T+
Sbjct: 239 RLFFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTD 298
Query: 898 DSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQII 1077
LFF+D++ +DM +F +RF+ Y++FP++ H+YKVYSYLLCLKKPD+ESGLAKLRQII
Sbjct: 299 SKLFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQII 358
Query: 1078 GDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSN 1257
GDDVE+KEFLFFEQ CKR IER TS+G+FGHS E L + P+ R WK N
Sbjct: 359 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKN 418
Query: 1258 IFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDD 1437
F+FL+ LGTL + ++R C+ H++E + FEVV D + +LDPL F NENFNE+RVDD
Sbjct: 419 TFEFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDD 478
Query: 1438 GYLERVKLPFFNYKG-DPRKKEV--YHFFSKQLHTESHLRALGCATKPPT--LRICWR-- 1596
GYLER++LPF+N D ++K V Y+ S + E R + A K P L+I W
Sbjct: 479 GYLERIRLPFWNLNDYDLKRKRVNAYNILSYRFEEE---RKIESAQKGPNKMLQIEWYGI 535
Query: 1597 ---TDDPSFVNFAR-----AVIPSNEMDDKKHHDAYTRLMSYLVKSGEMCTSAFISQKFD 1752
DP N + +D KK+ SY S + CT + +
Sbjct: 536 KEFKVDPFISNSITEFTLLEALLGKRIDPKKY--------SY---SKQACTLS----NYL 580
Query: 1753 EFLRPSEYGCDDGLDGEDAKE-LEAPTETRSNEFTLDIDSLLLGCPPESESSDSQITSEL 1929
FL C +GLDG + +E LE + ++ + D + L E + L
Sbjct: 581 TFL------CAEGLDGFNLEEHLERRLKAAGHDVSDDEEEELTSA--EQAGPIKILADPL 632
Query: 1930 GIDEREAVSQSP--TQKGMEGNGPIPSNFQ----KLDYSKMFKEVECHASHGRLINVPAD 2091
G +E + + P T+ +E G +++ +++Y+ +F C +HG I P+D
Sbjct: 633 GF-MKECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSD 691
Query: 2092 GNCFFHAITEVYQCTEDHVQMRKNFSEWLLDRD--PYHHLGKLIAKDGVFMEHELIYLFA 2265
GNCFF A TE ++ E +R +FS+WL++ + Y L ++I +GVFME ELIYLF
Sbjct: 692 GNCFFSAFTETFE-VERPDTLRSDFSDWLMEFNGGSYASLAEMIRPNGVFMEAELIYLFC 750
Query: 2266 LSRGLKIVV----HFEDKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRM-NFKLLDNLEG 2430
+ RG+ +++ H ++ ++ G EEGH+ G+HF+ ETY S + + LL ++
Sbjct: 751 VFRGVTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPC 810
Query: 2431 YHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLDAILEICD 2610
+ KF F P+HF C FRGRKAAF+TKV ADYGHNGM+YP N WVPSL+ I++IC
Sbjct: 811 GFSEEITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLEEIIQICG 870
Query: 2611 PDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMED 2790
++N ALI +YE +SLG HRDNE VY D ILTV G F IE ++ F M
Sbjct: 871 QGDDFNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGRFTIEFKDQVTSFLMTA 930
Query: 2791 ASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNKCLIVAVA 2970
SFF MP GFQK+ARH V+ +RVSITFR HVR ++G I+ +E +N CLI A +
Sbjct: 931 GSFFLMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREE--NYKNTCLINAFS 988
Query: 2971 GALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMD 3150
A+K S++ + L + N +W ++ G S+EDC E L V +++++N + V+
Sbjct: 989 KAMKRSKQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLG 1048
Query: 3151 FGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKIS---KCPHYNLL 3321
G I + NHFS + M R+ SHL +K NV+ ++G +S N +
Sbjct: 1049 KGALRISMALRNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGFDAMLSGDVGAAGVNKI 1108
Query: 3322 PFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFA 3501
F AN EF ++L SFL TTG+ LG+ LDNG K+F K + I ++ + GFA
Sbjct: 1109 QFAANFEFARILANSFLNMTTGICLGKALDNGEKYFLHILK--DRVKQIGIDVTMVCGFA 1166
Query: 3502 GSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESFIKRERSN 3681
GSGKS+ +Q WL KK +FCVVSPRT L +DW FKL L + KV TFE FIK ++S
Sbjct: 1167 GSGKSRKLQSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSK 1226
Query: 3682 LELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDILTFTHDVD 3861
L+LIVIDE+TLFPNGY+D L+Y+L +++LLFDPLQARYHN+ D+ ILTF HDVD
Sbjct: 1227 LDLIVIDELTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVD 1286
Query: 3862 RLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDE--SDSKIWIVNGPEDIKGSFGERP 4035
RL+ NI Y+Y + R+++ +F+RF D+P + + + ++WI + I +R
Sbjct: 1287 RLIGGQNIEYIYSTHRMSR-YFNRF-FDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQ 1344
Query: 4036 FP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRA 4212
P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TRA
Sbjct: 1345 EPCDVLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRA 1404
Query: 4213 KERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAID 4392
+ R S + LGG+++F K L I+ GEK+ M++ NLI ++ G D
Sbjct: 1405 RTRFSLCSTFLGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRRE-KENGCRD 1463
Query: 4393 EMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDL 4572
E+DREERLEGDPFLKPFIF+GQR+ + E E E V I+EP CQTHLYI+EPNF CYNFD
Sbjct: 1464 EVDREERLEGDPFLKPFIFLGQRVEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDF 1523
Query: 4573 IRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVK 4752
IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+MTFWMAV+
Sbjct: 1524 IREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVR 1583
Query: 4753 KRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQ 4932
KRLVFR E+EN +RLS AHL+GGL+Y NFK+ L+F DQGLLE +N FE KKL+KS
Sbjct: 1584 KRLVFREEEENYQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSC 1643
Query: 4933 ATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCR 5112
TIKSHSIRSD+DWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILVQFAPWCR
Sbjct: 1644 GTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCR 1703
Query: 5113 YLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIH 5292
YLE QIR+QLPEEIYIHSNKNFDDLN W KKFF RDICVESDYEAFDA QDEYILSFEIH
Sbjct: 1704 YLETQIRNQLPEEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIH 1763
Query: 5293 LMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRR 5472
LMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFTMCRYEWRR
Sbjct: 1764 LMKDAHFPQKIIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRR 1823
Query: 5473 GQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPEL 5652
GQP+AFAGDDMCALNNL + +DF+++F+ ISLKAKVERTE PMFCGWRLTPYGIVKEPEL
Sbjct: 1824 GQPIAFAGDDMCALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPEL 1883
Query: 5653 VYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHID 5832
VYNRFQVAIEEGKV+ECLENYAIEVSYAY+LSERLYEVLKSERQ+QYHQAVVRFIVTHID
Sbjct: 1884 VYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHID 1943
Query: 5833 KLKTKVKDLFQEQSSDEDI 5889
KLKTKV+DLF EQSSDEDI
Sbjct: 1944 KLKTKVRDLFLEQSSDEDI 1962
>gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotch virus]
Length = 1962
Score = 2025 bits (5247), Expect = 0.0
Identities = 1060/1999 (53%), Positives = 1353/1999 (67%), Gaps = 54/1999 (2%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + IYN A +T++SHSEFRN+HFA++++ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKK-------------- 372
+EL+PNGYLPHSHP SK ENH+L+ VLP V+N + + CSIKE K
Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120
Query: 373 ---LNCVVARQN--ITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGK 537
LN + + N + +N +V +DVSRY E +F + FS K++
Sbjct: 121 VSDLNALNSLDNSHTSFINRLVASKDVSRYTEE--ADAFFQSKKGSPELFSRNFIKSLEN 178
Query: 538 HKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVRD 717
++ FFHDEVHHW K +F FL + +R +FTVVYPPE+L + NSQNPK+Y FK+ +
Sbjct: 179 KEAVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKG 238
Query: 718 KLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITE 897
+LFFFPDGV +E Y+Q N+ WLF +L GD WT+ RH S YAHHLFEI G+L+T+
Sbjct: 239 RLFFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTD 298
Query: 898 DSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQII 1077
LFF+D++ +DM +F +RF+ Y++FP++ H+YKVYSYLLCLKKPD+ESGLAKLRQII
Sbjct: 299 SKLFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQII 358
Query: 1078 GDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSN 1257
GDDVE+KEFLFFEQ CKR IER TS+G+FGHS E L + P+ R WK N
Sbjct: 359 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKN 418
Query: 1258 IFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDD 1437
F+FL+ LGTL + ++R C+ H++E + FEVV D + +LDPL F NENFNE R DD
Sbjct: 419 TFEFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEGRADD 478
Query: 1438 GYLERVKLPFFN---YKGDPRKKEVYHFFSKQLHTESHLRALGCATKPPT--LRICWR-- 1596
GYLER++LPF+N Y R+ VY+ S + E R + A K P L+I W
Sbjct: 479 GYLERIRLPFWNLNDYDLKRRRVNVYNILSYRFEEE---RRIESAQKGPNKMLQIEWHGI 535
Query: 1597 ---TDDPSFVNFAR-----AVIPSNEMDDKKHHDAYTRLMSYLVKSGEMCTSAFISQKFD 1752
DP N + +D KK+ SY S + CT + +
Sbjct: 536 KEFKVDPFISNSITEFTLLEALLGKRIDPKKY--------SY---SKQACTLS----NYL 580
Query: 1753 EFLRPSEYGCDDGLDGEDAKE-LEAPTETRSNEFTLDIDSLLLGCPPESESSDSQITSEL 1929
FL C +GLDG + +E LE + ++ + D + L E + L
Sbjct: 581 TFL------CAEGLDGFNLEEHLERRLKAAGHDISDDEEEELTSA--EQAGPIKILADPL 632
Query: 1930 GIDEREAVSQSP--TQKGMEGNGPIPSNFQ----KLDYSKMFKEVECHASHGRLINVPAD 2091
G +E + + P T+ +E G +++ +++Y+ +F C +HG I P+D
Sbjct: 633 GF-MKECLEEIPIETEPSLEERGQFSTDYHSERFEINYNDIFNPHNCMNTHGDEIPTPSD 691
Query: 2092 GNCFFHAITEVYQCTEDHVQMRKNFSEWLLDRD--PYHHLGKLIAKDGVFMEHELIYLFA 2265
GNCFF A TE ++ E +R +FS+WL++ + Y L ++I DGVFME ELIYLF
Sbjct: 692 GNCFFSAFTETFE-VERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFC 750
Query: 2266 LSRGLKIVV----HFEDKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRM-NFKLLDNLEG 2430
+ RG+ +++ H ++ ++ G EEGH+ G+HF+ ETY S + + LL ++
Sbjct: 751 VFRGVTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPC 810
Query: 2431 YHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLDAILEICD 2610
+ KF F P+HF C FRGRKAAF+TKV ADYGHNGM+YP N WVPSLD I++IC
Sbjct: 811 GFSEEITKFRFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICG 870
Query: 2611 PDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMED 2790
++N ALI +YE +SLG HRDNE VY D ILTV G F IE ++ F M
Sbjct: 871 QGDDFNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKGQVTSFLMTA 930
Query: 2791 ASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNKCLIVAVA 2970
SFF MP GFQK+ARH V+ +RVSITFR HVR ++G I+ +E +N LI A +
Sbjct: 931 GSFFLMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREE--NYKNTRLIDAFS 988
Query: 2971 GALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMD 3150
A+K S++ + L + N +W ++ G S+EDC E L V +++++N + V+
Sbjct: 989 KAMKRSKQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLG 1048
Query: 3151 FGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKIS---KCPHYNLL 3321
G I + + NHFS + M R+ SHL +K +++ ++G E +S N +
Sbjct: 1049 KGAFRISMALKNNHFSVINAAQLMERTFVSHLLEKGDINVLEGFDEILSGDVGAAGVNKI 1108
Query: 3322 PFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFA 3501
F AN EF ++L SFL TTG+ LG+ LDNG K+F K + I ++ + GFA
Sbjct: 1109 QFAANFEFARILANSFLNMTTGICLGKALDNGEKYFLHILK--DRVKQIGIDVTVVCGFA 1166
Query: 3502 GSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESFIKRERSN 3681
GSGKS+ +Q WL KK +FCVVSPRT L +DW FKL L + KV TFE FIK ++S
Sbjct: 1167 GSGKSRKLQSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSK 1226
Query: 3682 LELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDILTFTHDVD 3861
L+LIVIDE+TLFPNGY+D L+Y+L +++LLFDPLQARYHN+ D+ ILTF HDVD
Sbjct: 1227 LDLIVIDELTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVD 1286
Query: 3862 RLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDE--SDSKIWIVNGPEDIKGSFGERP 4035
RLV +I Y+Y + R+++ +F+RF D+P + + + ++WI + I +R
Sbjct: 1287 RLVGGQSIEYIYSTHRMSR-YFNRF-FDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQ 1344
Query: 4036 FP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRA 4212
P DVLLV+S +EK+ ++ + +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TR+
Sbjct: 1345 EPCDVLLVESDLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRS 1404
Query: 4213 KERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAID 4392
+ R S + LGG+++F K L I+ GEK+ M++ NLI ++ G D
Sbjct: 1405 RTRFSLCSTFLGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRRE-KENGCRD 1463
Query: 4393 EMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDL 4572
E+DREERLEGDPFLKPFIF+GQRI + E E E V I+EP CQTHLYI+EPNF CYNFD
Sbjct: 1464 EVDREERLEGDPFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDF 1523
Query: 4573 IRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVK 4752
IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+MTFWMAV+
Sbjct: 1524 IREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVR 1583
Query: 4753 KRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQ 4932
KRLVFR E+EN +RLS AHL+GGL+Y NFK+ L+F DQGLLE +N FE KKL+KS
Sbjct: 1584 KRLVFREEEENYQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSC 1643
Query: 4933 ATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCR 5112
TIKSHSIRSD+DWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILVQFAPWCR
Sbjct: 1644 GTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCR 1703
Query: 5113 YLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIH 5292
YLE QIR+QLPEEIYIHSNKNFDDLN W KKFF RDICVESDYEAFDA QDEYILSFE+H
Sbjct: 1704 YLETQIRNQLPEEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEVH 1763
Query: 5293 LMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRR 5472
LMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFTMCRYEWRR
Sbjct: 1764 LMKDAHFPQKIIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRR 1823
Query: 5473 GQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPEL 5652
GQP+AFAGDDMCALNNL + +DF+++F+ ISLKAKVERTE PMFCGWRLTPYGIVKEPEL
Sbjct: 1824 GQPIAFAGDDMCALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPEL 1883
Query: 5653 VYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHID 5832
YNRFQVAIEEGKV+ECLENYAIEVSYAY+LSERLYEVLKSERQ+QYHQAVVRFIVTHID
Sbjct: 1884 AYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHID 1943
Query: 5833 KLKTKVKDLFQEQSSDEDI 5889
KLKTKV+DLF EQSSDEDI
Sbjct: 1944 KLKTKVRDLFLEQSSDEDI 1962
>gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotch virus]
Length = 1962
Score = 2025 bits (5247), Expect = 0.0
Identities = 1061/1999 (53%), Positives = 1357/1999 (67%), Gaps = 54/1999 (2%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + IYN A +T++SHSEFRN+HFA++++ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKK-------------- 372
+EL+PNGYLPHSHP SK ENH+L+ VLP V+N + + CSIKE K
Sbjct: 61 IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120
Query: 373 ---LNCVVARQN--ITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGK 537
LN + + N + +N +V +DVSRY E +F + FS K++
Sbjct: 121 VSDLNALNSLNNSHTSFINRLVASKDVSRYTEE--ADAFFQSKKGGPELFSRNFIKSLEN 178
Query: 538 HKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVRD 717
++ FFHDEVHHW K +F FL + +R +FTVVYPPE+L + NSQNPK+Y FK+ +
Sbjct: 179 KEAVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKG 238
Query: 718 KLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITE 897
+LFFFPDGV +E Y+Q N+ WLF +L GD WT+ RH S YAHHLFEI G+L+T+
Sbjct: 239 RLFFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTD 298
Query: 898 DSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQII 1077
LFF+D++ +DM +F +RF+ Y++FP++ H+YKVYSYLLCLKKPD+ESGLAKLRQII
Sbjct: 299 SKLFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQII 358
Query: 1078 GDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSN 1257
GDDVE+KEFLFFEQ CKR IER TS+G+FGHS E L + P+ R WK N
Sbjct: 359 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKN 418
Query: 1258 IFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDD 1437
F+FL+ LGTL + ++R C+ H++E + FEVV D + +LDPL F NENFNE+RVDD
Sbjct: 419 TFEFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDD 478
Query: 1438 GYLERVKLPFFNYKG-DPRKKEV--YHFFSKQLHTESHLRALGCATKPPT--LRICWR-- 1596
GYLER++LPF+N D ++K V Y S + E R + A K P L+I W
Sbjct: 479 GYLERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEE---RKIESAQKGPNKMLQIEWYGI 535
Query: 1597 ---TDDPSFVNFAR-----AVIPSNEMDDKKHHDAYTRLMSYLVKSGEMCTSAFISQKFD 1752
DP N + +D KK+ SY S + CT + +
Sbjct: 536 KEFKVDPFISNSITEFTLLEALLGKRIDPKKY--------SY---SKQACTLS----NYL 580
Query: 1753 EFLRPSEYGCDDGLDGEDAKE-LEAPTETRSNEFTLDIDSLLLGCPPESESSDSQITSEL 1929
FL C +GLDG + +E LE + ++ + D + L ++ +I ++
Sbjct: 581 TFL------CAEGLDGFNLEEHLERRLKAAGHDTSDDEEEELTSV---EQTGPIKILADP 631
Query: 1930 GIDEREAVSQSP--TQKGMEGNGPIPSNFQ----KLDYSKMFKEVECHASHGRLINVPAD 2091
E + + P T+ +E G +++ +++Y+ +F C +HG I P+D
Sbjct: 632 LSFMNECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSD 691
Query: 2092 GNCFFHAITEVYQCTEDHVQMRKNFSEWLLDRD--PYHHLGKLIAKDGVFMEHELIYLFA 2265
GNCFF A TE ++ E +R +FS+WL++ + Y L ++I DG+FME ELIYLF
Sbjct: 692 GNCFFSAFTETFE-VERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGIFMEAELIYLFC 750
Query: 2266 LSRGLKIVV----HFEDKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRM-NFKLLDNLEG 2430
+ RG+ +++ H ++ ++ G EEGH+ G+HF+ ETY S + + LL ++
Sbjct: 751 VFRGVTLIIHDRTHKKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDPLLGDIPC 810
Query: 2431 YHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLDAILEICD 2610
+ KF F P+HF C FRGRKAAF+TKV ADYGHNGM+YP N WVPSLD I++IC
Sbjct: 811 GFSEEITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICG 870
Query: 2611 PDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMED 2790
++N ALI +YE +SLG HRDNE VY D ILTV G F IE ++ F M
Sbjct: 871 QGDDFNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTA 930
Query: 2791 ASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNKCLIVAVA 2970
SFF MP GFQK+ARH V+ RVSITFR HVR ++G I+ +E +N CLI A +
Sbjct: 931 GSFFLMPKGFQKKARHSVSNGMPRVSITFRKHVRRLNGSPIAIREE--NYKNTCLIDAFS 988
Query: 2971 GALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMD 3150
A+K S++ + L + N +W ++ G S+EDC E L V ++++++ + V+
Sbjct: 989 KAMKRSKQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVSGKYVVLG 1048
Query: 3151 FGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKIS---KCPHYNLL 3321
G I + + NHFS + M R+ SHL +K NV+ ++G E +S N +
Sbjct: 1049 KGAFRISMALKDNHFSVINNAQLMERTFVSHLLEKGNVNVLEGFDEMLSGDVGAAGVNKI 1108
Query: 3322 PFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFA 3501
F AN EF ++L SFL TTG+ LG+ LDNG K+F K + I ++ + GFA
Sbjct: 1109 QFAANFEFARILANSFLNMTTGICLGKALDNGEKYFLHILK--DRVKQIGIDVTMVCGFA 1166
Query: 3502 GSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESFIKRERSN 3681
GSGKS+ +Q WL KK +FCVVSPRT L +DW FKL L + KV TFE FIK ++S
Sbjct: 1167 GSGKSRKLQSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSK 1226
Query: 3682 LELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDILTFTHDVD 3861
L+LIVIDE+TLFPNGY+D L+Y+L +++LLFDPLQAR+HN+ D+ ILTF HDVD
Sbjct: 1227 LDLIVIDELTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARHHNKMDESILTFEHDVD 1286
Query: 3862 RLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDE--SDSKIWIVNGPEDIKGSFGERP 4035
RLV +I Y+Y + R+++ +F+RF D+P + + + ++WI + I +R
Sbjct: 1287 RLVGGQSIEYIYSTHRMSR-YFNRF-FDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQ 1344
Query: 4036 FP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRA 4212
P DVLLV+S +EK+ ++ + +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TR+
Sbjct: 1345 EPCDVLLVESDLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRS 1404
Query: 4213 KERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAID 4392
+ R S + LGG+++F K L I+ GEK+ M++ NLI ++ G D
Sbjct: 1405 RTRFSLCSTFLGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRRE-KENGCRD 1463
Query: 4393 EMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDL 4572
E+DREERLEGDPFLKPFIF+GQRI + E E E V I+EP CQTHLYI+EPNF CYNFD
Sbjct: 1464 EVDREERLEGDPFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDF 1523
Query: 4573 IRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVK 4752
IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+MTFWMAV+
Sbjct: 1524 IREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVR 1583
Query: 4753 KRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQ 4932
KRLVFR E+EN +RLS AHL+GGL+Y NFK+ L+F DQGLLE +N FE KKL+KS
Sbjct: 1584 KRLVFREEEENYQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSC 1643
Query: 4933 ATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCR 5112
TIKSHSIRSD+DWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILVQFAPWCR
Sbjct: 1644 GTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCR 1703
Query: 5113 YLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIH 5292
YLE QIR+QLPEEIYIHSNKNFDDLN W KKFF RDICVESDYEAFDA QDEYILSFEIH
Sbjct: 1704 YLETQIRNQLPEEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIH 1763
Query: 5293 LMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRR 5472
LMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFTMCRYEWRR
Sbjct: 1764 LMKDAHFPRKIIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRR 1823
Query: 5473 GQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPEL 5652
GQP+AFAGDDMCALNNL + +DF+++F+ ISLKAKVERTE PMFCGWRLTPYGIVKEPEL
Sbjct: 1824 GQPIAFAGDDMCALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPEL 1883
Query: 5653 VYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHID 5832
VYNRFQVAIEEGKV+ECLENYAIEVSYAY+LSERLYEVLKSERQ+QYHQAVVRFIVTHID
Sbjct: 1884 VYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHID 1943
Query: 5833 KLKTKVKDLFQEQSSDEDI 5889
KLKTKV+DLF EQSSDEDI
Sbjct: 1944 KLKTKVRDLFLEQSSDEDI 1962
>gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 2008 bits (5203), Expect = 0.0
Identities = 1051/2007 (52%), Positives = 1331/2007 (66%), Gaps = 62/2007 (3%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + +YN A +T++SHSEFRN+HFA+A+ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKL------------- 375
+EL+PNGY+PHSHP SK ENHIL+ VLP V++ K + CSIKE K+
Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120
Query: 376 -------NCVVARQNITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMG 534
A + + +N +V +D+ RY E E FS D FSN + +
Sbjct: 121 GALGFCGKDTSASDHTSFINRLVASKDIRRYTE-EADAFFSSKKKNDPELFSNNFIRCIS 179
Query: 535 KHKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR 714
++ FFHDEVHHW K +F FL R + RR +FT+VYPPELL + NSQNPK+Y FK+ +
Sbjct: 180 NKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDK 239
Query: 715 DKLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLIT 894
+LFFFPDGV +E Y+Q N+ WLF + GD+ WT+ RH S Y+HHLFE+ G+LI+
Sbjct: 240 GRLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELIS 299
Query: 895 EDSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQI 1074
+ +FF+D+ +DM +F +RF+ Y++FP+ H+YKVYSYLLCLKKPD+ESGLAKLRQI
Sbjct: 300 DSKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQI 359
Query: 1075 IGDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCS 1254
IGDDVE+KEFLFFEQ CKR IER TS+G+FG+S + L + P++ R WK
Sbjct: 360 IGDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKK 419
Query: 1255 NIFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVD 1434
N F+FL+ LGTL ++I+R C+ HI+E + FEVV D + +LDPL F NENFNEERVD
Sbjct: 420 NTFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVD 479
Query: 1435 DGYLERVKLPFFNYKG-DPRKKEVYHF----FSKQLHTESHLRALGCATKPPTLRICW-- 1593
DGYL+RVKLPF+N K DP++ + + + ++ LR G L+I W
Sbjct: 480 DGYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERG---PHKMLQIEWYG 536
Query: 1594 --RTDDPSFVNFARAVIPSNEMDDKKHH----------DAYTRLMSYL--VKSGEMCTSA 1731
DDP N + K+ H D + +S++ + G
Sbjct: 537 IREFDDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEF 596
Query: 1732 FISQKFDEFLRPSEYGCDDGLDGEDAKELEAPTETRSNEFTLDIDSLLLGCPPESESSDS 1911
+ ++ R +GL G+ E + + I L+ P S+ +S
Sbjct: 597 VLERRLQSAGRDPIESESEGL-GKKTAESSGEADAANTLLETQISGLVAFIPTFSDEGES 655
Query: 1912 QITSELGIDE-----REAVSQSPTQKGMEGNGPIPSNFQKLDYSKMFKEVECHASHGRLI 2076
Q ++L ++ +E + T EG+ I ++D+S +F+ C +HG I
Sbjct: 656 QHRADLEVESEGEIGKEESFEEGTLSCAEGHEAIKF---EIDFSDIFRPHNCMNTHGYEI 712
Query: 2077 NVPADGNCFFHAITEVYQCTEDHVQMRKNFSEWL--LDRDPYHHLGKLIAKDGVFMEHEL 2250
P DGNCFF A + C D +R NF++WL D Y +G I +GVFME EL
Sbjct: 713 PTPMDGNCFFSAFAATFDCP-DSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAEL 771
Query: 2251 IYLFALSRGLKIVVHFE----DKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRMNFKLLD 2418
IYLF + R + +++H + +F G EEGH+ G HF+ ETY F
Sbjct: 772 IYLFCIYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRID--GFASDP 829
Query: 2419 NLE----GYHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSL 2586
NL GY + L F F PEHF C FRGRK AFLTKV ADYGHNGM+YP N WVPSL
Sbjct: 830 NLSELPCGYSE-ELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSL 888
Query: 2587 DAILEICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKR 2766
D I+ ICD ++N ALI +Y +SLG HRDNE VY D ILTV +G F IE ++
Sbjct: 889 DEIIRICDHGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQ 948
Query: 2767 IVEFAMEDASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRN 2946
F M SFF MP GFQ++ARH V RVSITFR H+R + G I+ ++ RN
Sbjct: 949 TASFLMTAGSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQD--NYRN 1006
Query: 2947 KCLIVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHM 3126
CLI A++ AL + + L + N +W F+ G S+EDC E L + +++ +
Sbjct: 1007 VCLIRALSKALNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFV 1066
Query: 3127 NDEIKVMDFGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKISK-- 3300
+ + V+ G + + + NHFS + E ++ R+ SHL KK+N+ + GL E +
Sbjct: 1067 DGKCLVLGEGAVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEM 1126
Query: 3301 CPHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEEC-SNISTE 3477
N + F A+ E ++L SFL TTG+ L LDNG K+F +SEE I +
Sbjct: 1127 STGVNCVQFIADFEHARVLANSFLNMTTGICLSRALDNGEKYF---LHMSEERPKQIGFD 1183
Query: 3478 LHCMIGFAGSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFES 3657
+ + GFAGSGKS+ +Q WL K+ +FCVVSPR L +DW FKL L + KV TFES
Sbjct: 1184 VTAICGFAGSGKSRQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFES 1243
Query: 3658 FIKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDI 3837
FIK ++S L++IV+DE+TLFPNGY+D LIY+L S ++LLFDPLQARYHN+ D+ +
Sbjct: 1244 FIKMDKSKLDMIVLDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAV 1303
Query: 3838 LTFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDES--DSKIWIVNGPEDI 4011
L F HDVDRL+ ++ Y+Y S R++K +F+RF D+P + E+ + ++WI++ I
Sbjct: 1304 LNFEHDVDRLIGGQDLRYIYSSHRMSK-YFNRF-FDVPCFNQAETTKEQRLWILDDVYSI 1361
Query: 4012 KGSFGERPFP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELR 4188
++ P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE R
Sbjct: 1362 TSVCIDQGEPCDVLLVESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFR 1421
Query: 4189 WNVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKD 4368
W VA TRAK R+SF + LGG+D+F L I+ G+++ MV+ NLI K
Sbjct: 1422 WMVALTRAKTRLSFCSTFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLI-KQ 1480
Query: 4369 LVMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNF 4548
G DE+DREERLEGDPFLKPFIF+G RI + E + ++EP CQTHLYI+EPNF
Sbjct: 1481 EKKNGCSDEVDREERLEGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNF 1540
Query: 4549 AQCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDE 4728
CYNFD IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+
Sbjct: 1541 GLCYNFDFIREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDD 1600
Query: 4729 MTFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFE 4908
MTFWMAVKKRLVFR E+EN +RLS AHL+GGL+YRNFK L+F DQGL E VN FE
Sbjct: 1601 MTFWMAVKKRLVFREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFE 1660
Query: 4909 VKKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLIL 5088
KKL+KS TIKSHSIRSDVDWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLIL
Sbjct: 1661 KKKLEKSCGTIKSHSIRSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLIL 1720
Query: 5089 VQFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDE 5268
VQFAPWCRYLE QIR+QLPEEIYIHSNKNFDDLN W K FF +DICVESDYEAFDACQDE
Sbjct: 1721 VQFAPWCRYLEAQIRNQLPEEIYIHSNKNFDDLNRWVKNFFQKDICVESDYEAFDACQDE 1780
Query: 5269 YILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFT 5448
YILSFEIHLMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLAN+AFT
Sbjct: 1781 YILSFEIHLMKDAHFPQRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFT 1840
Query: 5449 MCRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPY 5628
+CRYEWRRGQP+AFAGDDMCALNNLP+ +DF+++F+ ISLKAKVERTE PMFCGWRLTPY
Sbjct: 1841 LCRYEWRRGQPIAFAGDDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPY 1900
Query: 5629 GIVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVV 5808
GIVKEPELVYNRFQ+AIEEGKVMECLENYAIEVSYAY+LSERLYEVLKSERQIQYHQAVV
Sbjct: 1901 GIVKEPELVYNRFQIAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVV 1960
Query: 5809 RFIVTHIDKLKTKVKDLFQEQSSDEDI 5889
RFIVTHIDKLKT+VKDLF EQSSDEDI
Sbjct: 1961 RFIVTHIDKLKTRVKDLFLEQSSDEDI 1987
>gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 2005 bits (5195), Expect = 0.0
Identities = 1056/2006 (52%), Positives = 1333/2006 (66%), Gaps = 61/2006 (3%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + +YN A +T++SHSEFRN+HFA+A+ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKL------------- 375
+EL+PNGY+PHSHP SK ENHIL+ VLP V++ K + CSIKE K+
Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120
Query: 376 -------NCVVARQNITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMG 534
A + + +N +V +D+ RY E E FS D FSN + +
Sbjct: 121 GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTE-EADAFFSSKKKNDPELFSNNFIRCIS 179
Query: 535 KHKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR 714
++ FFHDEVHHW K +F FL R + RR +FT+VYPPELL + NSQNPK+Y FK+ +
Sbjct: 180 NKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDK 239
Query: 715 DKLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLIT 894
+LFFFPDGV +E Y+Q N+ WLF + GD+ WT+ RH S Y+HHLFE+ G+LI+
Sbjct: 240 GRLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELIS 299
Query: 895 EDSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQI 1074
+ +FF+D+ +DM +F +RF+ Y++FP+ H+YKVYSYLLCLKKPD+ESGLAKLRQI
Sbjct: 300 DSKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQI 359
Query: 1075 IGDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCS 1254
IGDDVE+KEFLFFEQ CKR IER TS+G+FG+S + L + P++ R WK
Sbjct: 360 IGDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKK 419
Query: 1255 NIFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVD 1434
N F+FL+ LGTL ++I+R C+ HI+E + FEVV D + +LDPL F NENFNEERVD
Sbjct: 420 NTFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVD 479
Query: 1435 DGYLERVKLPFFNYKG-DPRKKEVYHF----FSKQLHTESHLRALGCATKPPTLRICW-- 1593
DGYL+RVKLPF+N K DP++ + + + ++ LR G L+I W
Sbjct: 480 DGYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERG---PHKMLQIEWYG 536
Query: 1594 --RTDDPSFVNFARAVIPSNEMDDKKHHD---AYTRLMSYLVKSGEMCTSAFISQKFDEF 1758
DDP N + K+ H +Y++ L K + EF
Sbjct: 537 IREFDDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEF 596
Query: 1759 L---RPSEYGCD---DGLDGEDAKELEAPTETRSNEFTLD--IDSLLLGCPPESESSDSQ 1914
+ R G D L+G K E+ E + L+ I L+ P S+ +SQ
Sbjct: 597 VLERRLQSAGRDPIESELEGLGKKTAESSGEADAANTLLETQISGLVAFIPTFSDEGESQ 656
Query: 1915 ITSELGIDE-----REAVSQSPTQKGMEGNGPIPSNFQKLDYSKMFKEVECHASHGRLIN 2079
++L ++ +E + T EG+ I ++D+S +F+ C +HG I
Sbjct: 657 HRADLEVESEGEIGKEESFEEGTLSCAEGHEAIKF---EIDFSDIFRPHNCMNTHGYEIP 713
Query: 2080 VPADGNCFFHAITEVYQCTEDHVQMRKNFSEWL--LDRDPYHHLGKLIAKDGVFMEHELI 2253
P DGNCFF A + C D +R NF++WL D Y +G I +GVFME ELI
Sbjct: 714 TPMDGNCFFSAFAATFDCP-DSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELI 772
Query: 2254 YLFALSRGLKIVVHFE----DKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRMNFKLLDN 2421
YLF + R + +++H + +F G EEGH+ G HF+ ETY F N
Sbjct: 773 YLFCIYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRID--GFASDPN 830
Query: 2422 LE----GYHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLD 2589
L GY + L F F PEHF C FRGRK AFLTKV ADYGHNGM+YP N WVPSLD
Sbjct: 831 LSELPCGYSE-ELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLD 889
Query: 2590 AILEICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRI 2769
I+ ICD ++N ALI +Y +SLG HRDNE VY D ILTV +G F IE ++
Sbjct: 890 EIIRICDHGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQT 949
Query: 2770 VEFAMEDASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNK 2949
F M SFF MP GFQ++ARH V RVSITFR H+R + G I+ ++ RN
Sbjct: 950 ASFLMTAGSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQD--NYRNV 1007
Query: 2950 CLIVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMN 3129
CLI A++ AL + + L + N +W F+ G S+EDC E L + +++ ++
Sbjct: 1008 CLIRALSKALNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVD 1067
Query: 3130 DEIKVMDFGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKISK--C 3303
+ V+ G + + + NHFS + E ++ R+ SHL KK+N+ + GL E +
Sbjct: 1068 GKCLVLGEGAVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMS 1127
Query: 3304 PHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEEC-SNISTEL 3480
N + F A+ E ++L SFL TTG+ L LDNG K+F +SEE I ++
Sbjct: 1128 TGVNCVQFIADFEHARVLANSFLNMTTGICLSRALDNGEKYF---LHMSEERPKQIGFDV 1184
Query: 3481 HCMIGFAGSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESF 3660
+ GFAGSGKS+ +Q WL K+ +FCVVSPR L +DW FKL L + KV TFESF
Sbjct: 1185 TAICGFAGSGKSRQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESF 1244
Query: 3661 IKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDIL 3840
IK ++S L++IV+DE+TLFPNGY+D LIY+L S ++LLFDPLQARYHN+ D+ +L
Sbjct: 1245 IKMDKSKLDMIVLDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVL 1304
Query: 3841 TFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDES--DSKIWIVNGPEDIK 4014
F HDVDRL+ ++ Y+Y S R++K +F+RF D+P + E+ + ++WI++ I
Sbjct: 1305 NFEHDVDRLIGGQDLRYIYSSHRMSK-YFNRF-FDVPCFNQAETTKEQRLWILDDVYSIT 1362
Query: 4015 GSFGERPFP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRW 4191
++ P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW
Sbjct: 1363 SVCIDQGEPCDVLLVESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRW 1422
Query: 4192 NVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDL 4371
VA TRAK R+SF + LGG+D+F L I+ G+++ MV+ NLI K
Sbjct: 1423 MVALTRAKTRLSFCSTFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLI-KQE 1481
Query: 4372 VMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFA 4551
G DE+DREERLEGDPFLKPFIF+G RI + E + ++EP CQTHLYI+EPNF
Sbjct: 1482 KKNGCSDEVDREERLEGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNFG 1541
Query: 4552 QCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEM 4731
CYNFD IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+M
Sbjct: 1542 LCYNFDFIREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDM 1601
Query: 4732 TFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEV 4911
TFWMAVKKRLVFR E+EN +RLS AHL+GGL+YRNFK L+F DQGL E VN FE
Sbjct: 1602 TFWMAVKKRLVFREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEK 1661
Query: 4912 KKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILV 5091
KKL+KS TIKSHSIRSDVDWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILV
Sbjct: 1662 KKLEKSCGTIKSHSIRSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILV 1721
Query: 5092 QFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEY 5271
QFAPWCRYLE QIR+QLPEEIYIHSNKNFDDLN W K FF +DICVESDYEAFD CQDEY
Sbjct: 1722 QFAPWCRYLEAQIRNQLPEEIYIHSNKNFDDLNRWVKNFFQKDICVESDYEAFDVCQDEY 1781
Query: 5272 ILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTM 5451
ILSFEIHLMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLAN+AFT+
Sbjct: 1782 ILSFEIHLMKDAHFPQRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTL 1841
Query: 5452 CRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYG 5631
CRYEWRRGQP+AFAGDDMCALNNLP+ +DF+++F+ ISLKAKVERTE PMFCGWRLTPYG
Sbjct: 1842 CRYEWRRGQPIAFAGDDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYG 1901
Query: 5632 IVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVR 5811
IVKEPELVYNRFQ+AIEEGKVMECLENYAIEVSYAY+LSERLYEVLKSERQIQYHQAVVR
Sbjct: 1902 IVKEPELVYNRFQIAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVR 1961
Query: 5812 FIVTHIDKLKTKVKDLFQEQSSDEDI 5889
FIVTHIDKLKT+VKDLF EQSSDEDI
Sbjct: 1962 FIVTHIDKLKTRVKDLFLEQSSDEDI 1987
>gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 2005 bits (5194), Expect = 0.0
Identities = 1050/2007 (52%), Positives = 1330/2007 (66%), Gaps = 62/2007 (3%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + +YN A +T++SHSEFRN+HFA+A+ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKL------------- 375
+EL+PNGY+PHSHP SK ENHIL+ VLP V++ K + CSIKE K+
Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120
Query: 376 -------NCVVARQNITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMG 534
A + + +N +V +D+ RY E E FS D FSN + +
Sbjct: 121 GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTE-EADAFFSSKKKNDPELFSNNFIRCIS 179
Query: 535 KHKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR 714
++ FFHDEVHHW K +F FL R + RR +FT+VYPPELL + NSQNPK+Y FK+ +
Sbjct: 180 NKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDK 239
Query: 715 DKLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLIT 894
+LFFFPDGV +E Y+Q N+ WLF + GD+ WT+ RH S Y+HHLFE+ G+LI+
Sbjct: 240 GRLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELIS 299
Query: 895 EDSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQI 1074
+ +FF+D+ +DM +F +RF+ Y++FP+ H+YKVYSYLLCLKKPD+ESGLAKLRQI
Sbjct: 300 DSKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQI 359
Query: 1075 IGDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCS 1254
IGDDVE+KEFLFFEQ CKR IER TS+G+FG+S + L + P++ R WK
Sbjct: 360 IGDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKK 419
Query: 1255 NIFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVD 1434
N F+FL+ LGTL ++I+R C+ HI+E + FEVV D + +LDPL F NENFNEERVD
Sbjct: 420 NTFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVD 479
Query: 1435 DGYLERVKLPFFNYKG-DPRKKEVYHF----FSKQLHTESHLRALGCATKPPTLRICW-- 1593
DGYL+RVKLPF+N K DP++ + + + ++ LR G L+I W
Sbjct: 480 DGYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERG---PHKMLQIEWYG 536
Query: 1594 --RTDDPSFVNFARAVIPSNEMDDKKHH----------DAYTRLMSYL--VKSGEMCTSA 1731
DDP N + K+ H D + +S++ + G
Sbjct: 537 IREFDDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEF 596
Query: 1732 FISQKFDEFLRPSEYGCDDGLDGEDAKELEAPTETRSNEFTLDIDSLLLGCPPESESSDS 1911
+ ++ R +GL G+ E + + I L+ P S+ +S
Sbjct: 597 VLERRLQSAGRDPIESESEGL-GKKTAESSGEADAANTLLETQISGLVAFIPTFSDEGES 655
Query: 1912 QITSELGIDE-----REAVSQSPTQKGMEGNGPIPSNFQKLDYSKMFKEVECHASHGRLI 2076
Q ++L ++ +E + T EG+ I ++D+S +F+ C +HG I
Sbjct: 656 QHRADLEVESEGEIGKEESFEEGTLSCAEGHEAIKF---EIDFSDIFRPHNCMNTHGYEI 712
Query: 2077 NVPADGNCFFHAITEVYQCTEDHVQMRKNFSEWL--LDRDPYHHLGKLIAKDGVFMEHEL 2250
P DGNCFF A + C D +R NF++WL D Y +G I +GVFME EL
Sbjct: 713 PTPMDGNCFFSAFAATFDCP-DSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAEL 771
Query: 2251 IYLFALSRGLKIVVHFE----DKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRMNFKLLD 2418
IYLF + R + +++H + +F G EEGH+ G HF+ ETY F
Sbjct: 772 IYLFCIYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRID--GFASDP 829
Query: 2419 NLE----GYHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSL 2586
NL GY + L F F PEHF C FRGRK AFLTKV ADYGHNGM+YP N WVPSL
Sbjct: 830 NLSELPCGYSE-ELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSL 888
Query: 2587 DAILEICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKR 2766
D I+ ICD ++N ALI +Y +SLG HRDNE VY D ILTV +G F IE ++
Sbjct: 889 DEIIRICDHGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQ 948
Query: 2767 IVEFAMEDASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRN 2946
F M SFF MP GFQ++ARH V RVSITFR H+R + G I+ ++ RN
Sbjct: 949 TASFLMTAGSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQD--NYRN 1006
Query: 2947 KCLIVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHM 3126
CLI A++ AL + + L + N +W F+ G S+EDC E L + +++ +
Sbjct: 1007 VCLIRALSKALNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFV 1066
Query: 3127 NDEIKVMDFGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKISK-- 3300
+ + V+ G + + + NHFS + E ++ R+ SHL KK+N+ + GL E +
Sbjct: 1067 DGKCLVLGEGAVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEM 1126
Query: 3301 CPHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEEC-SNISTE 3477
N + F A+ E ++L SFL TTG+ L LDNG K+F +SEE I +
Sbjct: 1127 STGVNCVQFIADFEHARVLANSFLNMTTGICLSRALDNGEKYF---LHMSEERPKQIGFD 1183
Query: 3478 LHCMIGFAGSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFES 3657
+ + GFAGSGKS+ +Q WL K+ +FCVVSPR L +DW FKL L + KV TFES
Sbjct: 1184 VTAICGFAGSGKSRQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFES 1243
Query: 3658 FIKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDI 3837
FIK ++S L++IV+DE+TLFPNGY+D LIY+L S ++LLFDPLQARYHN+ D+ +
Sbjct: 1244 FIKMDKSKLDMIVLDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAV 1303
Query: 3838 LTFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDES--DSKIWIVNGPEDI 4011
L F HDVDRL+ ++ Y+Y S R++K +F+RF D+P + E+ + ++WI++ I
Sbjct: 1304 LNFEHDVDRLIGGQDLRYIYSSHRMSK-YFNRF-FDVPCFNQAETTKEQRLWILDDVYSI 1361
Query: 4012 KGSFGERPFP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELR 4188
++ P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE R
Sbjct: 1362 TSVCIDQGEPCDVLLVESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFR 1421
Query: 4189 WNVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKD 4368
W VA TRAK R+SF + LGG+D+F L I+ G+++ MV+ NLI K
Sbjct: 1422 WMVALTRAKTRLSFCSTFLGGMDEFKIKRGESLVTSILEGKQITFERLNMMVKCNLI-KQ 1480
Query: 4369 LVMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNF 4548
G DE+DREERLEGDPFLKPFIF+GQRI + E + ++EP CQTHLYI+EPNF
Sbjct: 1481 EKKNGCSDEVDREERLEGDPFLKPFIFLGQRIQKSHDEVGEIEVREPTCQTHLYITEPNF 1540
Query: 4549 AQCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDE 4728
CYNFD IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+
Sbjct: 1541 GLCYNFDFIREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDD 1600
Query: 4729 MTFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFE 4908
MTFWMAVKKRLVFR E+EN +RLS AHL+GGL+YRNFK L+F DQGL E VN FE
Sbjct: 1601 MTFWMAVKKRLVFREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFE 1660
Query: 4909 VKKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLIL 5088
KKL+KS TIKSHSIRSDVDWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLIL
Sbjct: 1661 KKKLEKSCGTIKSHSIRSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLIL 1720
Query: 5089 VQFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDE 5268
VQFAPWCRYLE QIR+QLPEEIYIHSNKNFDDL W K FF +DICVESDYEAFD CQDE
Sbjct: 1721 VQFAPWCRYLEAQIRNQLPEEIYIHSNKNFDDLYRWVKNFFQKDICVESDYEAFDVCQDE 1780
Query: 5269 YILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFT 5448
YILSFEIHLMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLAN+AFT
Sbjct: 1781 YILSFEIHLMKDAHFPQRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFT 1840
Query: 5449 MCRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPY 5628
+CRYEWRRGQP+AFAGDDMCALNNLP+ +DF+++F+ ISLKAKVERTE PMFCGWRLTPY
Sbjct: 1841 LCRYEWRRGQPIAFAGDDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPY 1900
Query: 5629 GIVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVV 5808
GIVKEPELVYNRFQ+AIEEGKVMECLENYAIEVSYAY+LSERLYEVLKSERQIQYHQAVV
Sbjct: 1901 GIVKEPELVYNRFQIAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVV 1960
Query: 5809 RFIVTHIDKLKTKVKDLFQEQSSDEDI 5889
RFIVTHIDKLKT+VKDLF EQSSDEDI
Sbjct: 1961 RFIVTHIDKLKTRVKDLFLEQSSDEDI 1987
>gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus]
Length = 1987
Score = 2002 bits (5187), Expect = 0.0
Identities = 1055/2006 (52%), Positives = 1332/2006 (66%), Gaps = 61/2006 (3%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MAL+SNKTAIE +LGNFEK + +YN A +T++SHSEFRN+HFA+A+ + KK S +G
Sbjct: 1 MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKL------------- 375
+EL+PNGY+PHSHP SK ENHIL+ VLP V++ K + CSIKE K+
Sbjct: 61 IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120
Query: 376 -------NCVVARQNITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMG 534
A + + +N +V +D+ RY E E FS D FSN + +
Sbjct: 121 GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTE-EADAFFSSKKKNDPELFSNNFIRCIS 179
Query: 535 KHKSFFFHDEVHHWGKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR 714
++ FFHDEVHHW K +F FL R + RR +FT+VYPPELL + NSQNPK+Y FK+ +
Sbjct: 180 NKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDK 239
Query: 715 DKLFFFPDGVSSEGYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLIT 894
+LFFFPDGV +E Y+Q N+ WLF + GD+ WT+ RH S Y+HHLFE+ G+LI+
Sbjct: 240 GRLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELIS 299
Query: 895 EDSLFFNDFDVVDMHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQI 1074
+ +FF+D+ +DM +F +RF+ Y++FP+ H+YKVYSYLLCLKKPD+ESGLAKLRQI
Sbjct: 300 DSKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQI 359
Query: 1075 IGDDVEVKEFLFFEQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCS 1254
IGDDVE+KEFLFFEQ CKR IER TS+G+FG+S + L + P++ R WK
Sbjct: 360 IGDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKK 419
Query: 1255 NIFDFLYDLGTLCIQIDRGTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVD 1434
N F+FL+ LGTL ++I+R C+ HI+E + FEVV D + +LDPL F NENFNEERVD
Sbjct: 420 NTFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVD 479
Query: 1435 DGYLERVKLPFFNYKG-DPRKKEVYHF----FSKQLHTESHLRALGCATKPPTLRICW-- 1593
DGYL+RVKLPF+N K DP++ + + + ++ LR G L+I W
Sbjct: 480 DGYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERG---PHKMLQIEWYG 536
Query: 1594 --RTDDPSFVNFARAVIPSNEMDDKKHHD---AYTRLMSYLVKSGEMCTSAFISQKFDEF 1758
DDP N + K+ H +Y++ L K + EF
Sbjct: 537 IREFDDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEF 596
Query: 1759 L---RPSEYGCD---DGLDGEDAKELEAPTETRSNEFTLD--IDSLLLGCPPESESSDSQ 1914
+ R G D L+G K E+ E + L+ I L+ P S+ +SQ
Sbjct: 597 VLERRLQSAGRDPIESELEGLGKKTAESSGEADAANTLLETQISGLVAFIPTFSDEGESQ 656
Query: 1915 ITSELGIDE-----REAVSQSPTQKGMEGNGPIPSNFQKLDYSKMFKEVECHASHGRLIN 2079
++L ++ +E + T EG+ I ++D+S +F+ C +HG I
Sbjct: 657 HRADLEVESEGEIGKEESFEEGTLSCAEGHEAIKF---EIDFSDIFRPHNCMNTHGYEIP 713
Query: 2080 VPADGNCFFHAITEVYQCTEDHVQMRKNFSEWL--LDRDPYHHLGKLIAKDGVFMEHELI 2253
P DGNCFF A + C D +R NF++WL D Y +G I +GVFME ELI
Sbjct: 714 TPMDGNCFFSAFAATFDCP-DSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELI 772
Query: 2254 YLFALSRGLKIVVHFE----DKIFQFGEGEEEGHIHCDGHHFMAYETYTFSRMNFKLLDN 2421
YLF + R + +++H + +F G EEGH+ G HF+ ETY F N
Sbjct: 773 YLFCIYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRID--GFASDPN 830
Query: 2422 LE----GYHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGADYGHNGMLYPVNDWVPSLD 2589
L GY + L F F PEHF C FRGRK AFLTKV ADYGHNGM+YP N WVPSLD
Sbjct: 831 LSELPCGYSE-ELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLD 889
Query: 2590 AILEICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRI 2769
I+ ICD ++N ALI +Y +SLG HRDNE VY D ILTV +G F IE ++
Sbjct: 890 EIIRICDHGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQT 949
Query: 2770 VEFAMEDASFFTMPSGFQKRARHGVTATKNRVSITFRTHVRMMSGKAISESKELKKKRNK 2949
F M SFF MP GFQ++ARH V RVSITFR H+R + G I+ ++ RN
Sbjct: 950 ASFLMTAGSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQD--NYRNV 1007
Query: 2950 CLIVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMN 3129
CLI A++ AL + + L + N +W F+ G S+EDC E L + +++ ++
Sbjct: 1008 CLIRALSKALNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVD 1067
Query: 3130 DEIKVMDFGQTVIKIKFEANHFSALREFINMPRSSFSHLQKKANVSAVKGLVEKISK--C 3303
+ V+ G + + + NHFS + E ++ R+ SHL KK+N+ + GL E +
Sbjct: 1068 GKCLVLGEGAVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMS 1127
Query: 3304 PHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSFKLSEEC-SNISTEL 3480
N + F A+ E ++L SFL TTG+ L LDNG K+F +SEE I ++
Sbjct: 1128 TGVNCVQFIADFEHARVLANSFLNMTTGICLSRALDNGEKYF---LHMSEERPKQIGFDV 1184
Query: 3481 HCMIGFAGSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESF 3660
+ GFAGSGKS+ +Q WL K+ +FCVVSPR L +DW FKL L + KV TFESF
Sbjct: 1185 TAICGFAGSGKSRQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESF 1244
Query: 3661 IKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDIL 3840
IK ++S L++IV+DE+TLFPNGY+D LIY+L S ++LLFDPLQARYHN+ D+ +L
Sbjct: 1245 IKMDKSKLDMIVLDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVL 1304
Query: 3841 TFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDES--DSKIWIVNGPEDIK 4014
F HDVDRL+ ++ Y+Y S R++K +F+RF D+P + E+ + ++WI++ I
Sbjct: 1305 NFEHDVDRLIGGQDLRYIYSSHRMSK-YFNRF-FDVPCFNQAETTKEQRLWILDDVYSIT 1362
Query: 4015 GSFGERPFP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRW 4191
++ P DVLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW
Sbjct: 1363 SVCIDQGEPCDVLLVESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRW 1422
Query: 4192 NVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDL 4371
VA TRAK R+SF + LGG+D+F L I+ G+++ MV+ NLI K
Sbjct: 1423 MVALTRAKTRLSFCSTFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLI-KQE 1481
Query: 4372 VMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFA 4551
G DE+DREERLEGDPFLKPFIF+G RI + E + ++EP CQTHLYI+EPNF
Sbjct: 1482 KKNGCSDEVDREERLEGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNFG 1541
Query: 4552 QCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEM 4731
CYNFD IR KE+REYREDMLVT+QFCD+Y+K T GPLRFKAIYPKHS DD+M
Sbjct: 1542 LCYNFDFIREKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDM 1601
Query: 4732 TFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEV 4911
TFWMAVKKRLVFR E+EN +RLS AHL+GGL+YRNFK L+F DQGL E VN FE
Sbjct: 1602 TFWMAVKKRLVFREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEK 1661
Query: 4912 KKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILV 5091
KKL+KS TIKSHSIRSDVDWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILV
Sbjct: 1662 KKLEKSCGTIKSHSIRSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILV 1721
Query: 5092 QFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEY 5271
QFAPWCRYLE QIR+QLPEEIYIHSNKNFDDL W K FF +DICVESDYEAFD CQDEY
Sbjct: 1722 QFAPWCRYLEAQIRNQLPEEIYIHSNKNFDDLYRWVKNFFQKDICVESDYEAFDVCQDEY 1781
Query: 5272 ILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTM 5451
ILSFEIHLMKDA P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLAN+AFT+
Sbjct: 1782 ILSFEIHLMKDAHFPQRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTL 1841
Query: 5452 CRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYG 5631
CRYEWRRGQP+AFAGDDMCALNNLP+ +DF+++F+ ISLKAKVERTE PMFCGWRLTPYG
Sbjct: 1842 CRYEWRRGQPIAFAGDDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYG 1901
Query: 5632 IVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVR 5811
IVKEPELVYNRFQ+AIEEGKVMECLENYAIEVSYAY+LSERLYEVLKSERQIQYHQAVVR
Sbjct: 1902 IVKEPELVYNRFQIAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVR 1961
Query: 5812 FIVTHIDKLKTKVKDLFQEQSSDEDI 5889
FIVTHIDKLKT+VKDLF EQSSDEDI
Sbjct: 1962 FIVTHIDKLKTRVKDLFLEQSSDEDI 1987
>gb|AKN09002.1| replicase [Apricot vein clearing associated virus]
Length = 2021
Score = 1243 bits (3215), Expect = 0.0
Identities = 793/2081 (38%), Positives = 1114/2081 (53%), Gaps = 139/2081 (6%)
Frame = +1
Query: 61 LLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIGVE 240
+L+ K+ E N E I + A ++L + HFA+ + LK+KLSS+GV
Sbjct: 4 ILNYKSPSEKFFSNLEMAKKTEIISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVP 63
Query: 241 LFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKLNCVVARQNITLL--- 411
L P YL HSHPFSK LENHIL VLP I ++F SIK K+ + + ++L
Sbjct: 64 LHPTPYLAHSHPFSKMLENHILLNVLPGHITGS-WVFSSIKPSKVESLATKGKKSVLRTV 122
Query: 412 NEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGKHKSFFFHDEVHHWGKKNL 591
N ++ +D RY +V+ S + + + + F K ++ HDEVHHW ++
Sbjct: 123 NRLLCAKDFGRY-DVDTDSSVIRSISREAPDILPEPFIRAVKGRNVMIHDEVHHWTLDDM 181
Query: 592 FKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR-DKLFFFPDGVSSEGYQQP 768
FL+R +P R VF+VVYP ELL G SQNPKMY F+ + DK+ FFPDG +SEGY+Q
Sbjct: 182 LGFLDRARPNRFVFSVVYPVELLAGIPESQNPKMYKFQDSKSDKIVFFPDGKASEGYEQR 241
Query: 769 ANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITEDSLFFNDFDVVDMHHMF 948
ANL WLF + WT+ R S Y+HHLFE+VPG T++ FFNDF+ +D+ +F
Sbjct: 242 ANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNYFTDEIRFFNDFETIDLQCIF 301
Query: 949 KNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQIIGDDVEVKEFLFFEQLCK 1128
K+RF D P++ V +VYSYL+CLKKPD++S +AKL+Q++GDD++V+ +FF L
Sbjct: 302 KSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLKQLMGDDLDVRVQVFFRSLVH 361
Query: 1129 RFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSNIFDFLYDLGTLCIQIDR 1308
R + + +F S++ KF+ F PD + TWK N FDFL L L +++
Sbjct: 362 RILNESECFSLFDVSIVNKWKKKFLDFAPDWLLHGFMTWKSGNFFDFLMSLKILQVEV-- 419
Query: 1309 GTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDDGYLERVKLPFFNYKGDP 1488
P E+V DS+ + + FD + + + V G+ +R +P +
Sbjct: 420 -----------PTEIV--DSTFERNFISLFDVDPHVSAPLVIKGF-KRFMMPHSEVEKRV 465
Query: 1489 RKKEVYH---FFSKQLHTESHLR-ALGCATKPPTLRICWRTDDPSFVNFARAVIPSNEMD 1656
+ E H F + + H + A+ A+ R++ + ++ +I +
Sbjct: 466 NRDEASHKVTIFRRPSSSSPHCKYAIELASIA-------RSESSNCMSGGVMMIT---LP 515
Query: 1657 DKKHHDA------YTRLMSYLVKSGEMCTSAFISQKFDEFLR------------------ 1764
+H + Y L YL +GE + +I++ +FL
Sbjct: 516 KDRHIELLLEGCNYCLLHEYL-NTGESFSENYINRMLADFLEDLEIIGKDCFQLSINGVR 574
Query: 1765 ---PSEYGCD-----------------DGLDGEDAKELEAPTETRSNEFTLDI--DSLLL 1878
P G D L E+ L+ + D+ D L
Sbjct: 575 SLPPEHVGSDVSWKRYKLVESALERLFGDLLNEELSFLQVEPSVPDRGYVADVLPDPLFP 634
Query: 1879 GCPPESES-----SDSQITSELG-IDEREAVSQSPTQKGMEGNG-------PI--PSNFQ 2013
C P S++ SEL +D E SP + G PI P N
Sbjct: 635 ACIPVSDTVRNGGEGPTAVSELALVDPLETSVVSPISDTVGGTTFNSFPDFPIIPPINLA 694
Query: 2014 KLDYSKMFKEVECH--ASHGRLINVPADGNCFFHAITEVYQCTEDHVQMRKNFSEWLLDR 2187
L+ + ++ V C + ++I ADG CFFH + + F ++ +
Sbjct: 695 LLENT--YRPVTCSKIGNSFQIIRASADGRCFFHTLLSTSLFGGSVNNLVNTFCNFIKNL 752
Query: 2188 DPYHHLGKLIAKDGVFMEHELIYLFALSRGLKIVVH---FEDKIFQFGEG-------EEE 2337
+ H ++G + E +I LF + G+++ H + + G G + E
Sbjct: 753 N--EHEAARQVQEGAYPEGWMINLFLANYGIRMCCHQHSADGVTIETGSGPISFCSLKME 810
Query: 2338 GH---IHCDGHHFMAYETYTFSRMNFK---LLDNLEGYHDIRLEKFSFAPEHFVCHSFRG 2499
H + C T + + +++ L+G SFRG
Sbjct: 811 NHFDYLRCLSSGVSKEHTGLLGKTTYPSGPIINALQGLKP---------------KSFRG 855
Query: 2500 RKAAFLTKVGA-DYGHNGMLYPVNDWVPSLDAILEICDPDSNYNSALIQWYEEGASLGLH 2676
R + F + DYGHNG Y +W LD + D +N+ L+Q Y++G+ +G H
Sbjct: 856 RSSFFFARSNEIDYGHNGFKYRTENWFAELD---DFIPSDLIFNACLVQVYDKGSKIGFH 912
Query: 2677 RDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMEDASFFTMPSGFQKRARHGVTA-T 2853
+DNE Y ILTVN G F + + F + D + + K+ RH VT+ +
Sbjct: 913 KDNEQCYAGYPILTVNF-GLALFEFDSGEA---FNLTDGDTILLSGDYLKKKRHRVTSLS 968
Query: 2854 KNRVSITFRTHVRMMSGKAISE-SKELKKKRNKCLIVAVAGALKSSEEKVCQALISANKS 3030
NR+S+TFR HV M+ + S + K +NKC+I AVA AL + V ++ A +
Sbjct: 969 DNRISLTFRRHVCRMNKSPLEFFSNDGKLGKNKCIIHAVAMALGQTSNTVANKIV-AQRP 1027
Query: 3031 YWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMDFG-QTVIKIKFEA--NHFSA 3201
L + D + + + ++ + DE + M+ + +IK F H
Sbjct: 1028 DLLQCLVDDEMLDKQTTEAICVIMNLHATIVNEDEGETMELNPEGLIKSSFSVLDEHMMV 1087
Query: 3202 LREFINMPRSSFSHLQKKANVSAVKGLVEKISKCPHYNLLPFNANGEFFQMLRKSFLQRT 3381
L + N + +++ V C + ++ + A+ E L SFL T
Sbjct: 1088 LSDVPNCMSKKGIDICMSPDLANSNCAVNYEVTCQNLQVIQYQADHERAIKLMNSFLAGT 1147
Query: 3382 TGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFAGSGKSKVMQD---------W 3534
TG VL E++ G++FF ++E S+ EL + GFAGSGKS + +
Sbjct: 1148 TGAVLNELVFKGSRFFTFMDSVNERKSDFVEELSFVPGFAGSGKSLGLLNEVKRISREIH 1207
Query: 3535 LGKVKK--------------------SSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFE 3654
L K KK S C++SPR L DW KLG S + V TFE
Sbjct: 1208 LAKEKKRMGKGDGKGHEKKERNRGNLKSMCIISPRRNLADDWETKLGPSALEHCSVTTFE 1267
Query: 3655 SFIKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKD 3834
F K S ++LIV+DE+TLFPNGYID LI+ ++ +++L+FDPLQARY + +D+
Sbjct: 1268 VFFKASISKIKLIVVDELTLFPNGYIDLLIFRIRTESPNCKLILIFDPLQARYDSAQDRA 1327
Query: 3835 ILTFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDESDSKIWIVNGPEDIK 4014
IL HDVD ++ D ++Y+Y S R + FN+ ++R+E D++ E K
Sbjct: 1328 ILGSEHDVDLILGDSEVDYMYQSKRFESE--ELFNL-FEDLKRNEVDAE-----SQETGK 1379
Query: 4015 GS-FGERPFP----------------DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHV 4143
G+ F R + DVLLV S E ++ I+T+TFGESQGLT +H
Sbjct: 1380 GAKFRPRMYTNLLTMKVEEENQGNPIDVLLVGSFDEAGLFASSIKTMTFGESQGLTVDHA 1439
Query: 4144 CIVLSESTASSNELRWNVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDH 4323
I+LSE++A S++ RW VA TRA+++V+FL HL GL+ FL+ + L ++N +
Sbjct: 1440 AILLSENSALSDDHRWLVALTRARKKVTFLCLHLSGLNGFLSTMENRLVAAVINKGLITK 1499
Query: 4324 AFYRKMVRSNLIFKDLVMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQ 4503
MVR+ L + DE+DRE+RLEGD FLK IF+GQR E E I
Sbjct: 1500 KRLSSMVRAKLNYVKFKGLAGKDEVDREDRLEGDLFLKGVIFLGQRCEIMEPEIVEPVIA 1559
Query: 4504 EPRCQTHLYISEPNFAQCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGP 4683
+ +TH ++ + NFAQCYNFD IR KE RE+R VT+QF DNY T GP
Sbjct: 1560 KEDMKTHFFVCQENFAQCYNFDNIRAKELREFRIGHRVTNQFIDNYEIVQHGQKKHTAGP 1619
Query: 4684 LRFKAIYPKHSHDDEMTFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKF 4863
LRF+AIYP+H DD++TF MAV KRL F +E + R +L AH G +++ N + L F
Sbjct: 1620 LRFEAIYPRHCADDDVTFLMAVHKRLRFSNEMKEREKLERAHGTGSILFHNLIQKLGLNF 1679
Query: 4864 VHDQGLLERCVNDFEVKKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVD 5043
D L E CVNDFE KKL+KS+A + +HSIRSD DW+ N VFLFMKSQLCTK+EKQ+VD
Sbjct: 1680 TWDNQLFEECVNDFECKKLEKSKAVLANHSIRSDNDWSPNWVFLFMKSQLCTKYEKQYVD 1739
Query: 5044 AKAGQTLACFQHLILVQFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDI 5223
AKAGQTLACFQH+ILV FAP+CRY+E+Q+R QLP EIYIHSNKNF+DLNEW KK+ D+
Sbjct: 1740 AKAGQTLACFQHMILVTFAPYCRYMEKQLRAQLPGEIYIHSNKNFNDLNEWVKKYAGDDL 1799
Query: 5224 CVESDYEAFDACQDEYILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGE 5403
CVESDYEAFDA QD+YILSFE+ +M+ +P+ +I AYIDLK L CKLGHFA+MRFTGE
Sbjct: 1800 CVESDYEAFDASQDQYILSFELFMMRHMHIPEQIIQAYIDLKVNLGCKLGHFAIMRFTGE 1859
Query: 5404 FCTFLFNTLANMAFTMCRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVE 5583
F TFLFNTLANMAFTM RYEW G P+AFAGDDMCAL NL + F VF++ISLKAK +
Sbjct: 1860 FSTFLFNTLANMAFTMRRYEWNSGDPIAFAGDDMCALKNLKVTDQFNNVFEKISLKAKTQ 1919
Query: 5584 RTERPMFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYE 5763
TE PMFCGWRL+ +GIVKEPELVYNRF VA+E G V +CLENYAIEVSYAY+L ERL++
Sbjct: 1920 ITEVPMFCGWRLSKFGIVKEPELVYNRFMVALERGNVKDCLENYAIEVSYAYSLGERLFD 1979
Query: 5764 VLKSERQIQYHQAVVRFIVTHIDKLKTKVKDLFQEQSSDED 5886
+LK E Q++YHQAVVRFIV H+ L+TKVKDLF EQ SDED
Sbjct: 1980 ILKREEQLEYHQAVVRFIVKHLGDLRTKVKDLFAEQ-SDED 2019
>gb|AKN08994.1| replicase [Caucasus prunus virus]
Length = 1986
Score = 1003 bits (2594), Expect = 0.0
Identities = 546/1161 (47%), Positives = 736/1161 (63%), Gaps = 12/1161 (1%)
Frame = +1
Query: 2428 GYHDIR-LEKFSFAPEHFVCHSFRGRKAAFLTKVGA-DYGHNGMLYPVNDWVPSLDAILE 2601
G++D L K + F + R A F ++ + DYGHN + Y N W +D +L
Sbjct: 835 GFNDFEELRKVVGSISMFKKTPLKNRDAFFFSESKSIDYGHNRIKYAHNHW-NGVDQLLP 893
Query: 2602 ICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGSCNFRIEV-DKRIVEF 2778
++YN+ LIQ Y+EG S+G+HRDNE VY + SIL++NL G F+IE + F
Sbjct: 894 -SSLRNDYNAMLIQVYKEGGSIGMHRDNEKVYDNDSILSINLNGDALFQIEAKSSKRYSF 952
Query: 2779 AMEDASFFTMPSGFQKRARHGVT-ATKNRVSITFRTHVRMMSGKAISESKELKKKRNKCL 2955
M+D +F M FQ + RHGV AT+ R+++TFR HVR + I + K +N CL
Sbjct: 953 RMKDGDYFLMKRDFQAKFRHGVQGATEGRINVTFRKHVRNSRNEPIYLG--ISKFKNICL 1010
Query: 2956 IVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDE 3135
+ +++ K + ALI NK+YW +F++ G +L D N+ AE L E++MN++
Sbjct: 1011 MRSLSILEKRPLYDILLALIKKNKNYWTSFLEFGVGGTLADLNQAAEDLSFRFELYMNEK 1070
Query: 3136 IKVMDFGQTVIKIKFEANHFSALREFI-NMPRSSFSHLQKKANVSAVKGLVEK----ISK 3300
+ ++ +HFS RE N+ + + + K+ S + +
Sbjct: 1071 WIAGGNRGPIYRLNLSDDHFSVHRELSGNVEDTQLNFSKAKSKQSNFSSSDDDNSFDLDS 1130
Query: 3301 CPHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVL-DNGAKFFERSFKLSEECSNISTE 3477
H N F + ++LR+SFL RTTG +L + +NGA R ++ + E
Sbjct: 1131 IEHVNKSLFEPLNDAAELLRQSFLNRTTGKILSDAFGENGAHL--RRIRIVKSDDPFPEE 1188
Query: 3478 LHCMIGFAGSGKSKVMQDWLGKVKKSSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFES 3657
++ GFAGSGKS +Q L K F V+ PR L DW K+ S +KVCTFE
Sbjct: 1189 VYFSCGFAGSGKSLSLQSKLKSNFKLKFLVICPRVELKEDWERKVKCSS---HKVCTFEV 1245
Query: 3658 FIKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKS-KAEVVLLFDPLQARYHNEKDKD 3834
+ + S +ELIVIDE+ LFP GY+D +I+ L+ K+ K +V+LLFDPLQARYH++ D+
Sbjct: 1246 ALLQNLSRVELIVIDELGLFPRGYLDLMIFKLRTEKNFKGKVMLLFDPLQARYHSDSDER 1305
Query: 3835 ILTFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDESDSKIWIVNGPEDIK 4014
L H+ DR+ + INYL+ S+RL+K FF F VD+ + + ++ +
Sbjct: 1306 FLHEIHECDRITSGAKINYLFESWRLSKKFFGNFFVDIELRNSGSVNYELDFFDNHIVAA 1365
Query: 4015 GSFGERPFP-DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRW 4191
+R FP D++LV S+ EK + ++ +TFGE+QGLT H CIVLSE ++ RW
Sbjct: 1366 NEAKKRGFPIDLILVASRDEKNSFAGKVNVLTFGEAQGLTVKHSCIVLSEYAEKQDDYRW 1425
Query: 4192 NVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDL 4371
VA TRAKE++SF+ SH GL F+++ + G MV L+
Sbjct: 1426 VVALTRAKEKISFITSHRSGLTGFMSSMIGRPIHAFLTGLPFTSNRMNWMVNCELVECHR 1485
Query: 4372 VMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFA 4551
GG DE+DRE+RLEGDPFLKPF+F+GQRIN +E E + EP+ + HL IS+ N+A
Sbjct: 1486 ATGGR-DEVDREDRLEGDPFLKPFVFLGQRINSEEYEIIEPEVIEPKGRVHLCISQENYA 1544
Query: 4552 QCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEM 4731
NFDLIR KE RE + L T+QFC +YN+ G + + PLRF++I+P+H DD++
Sbjct: 1545 LARNFDLIRAKEYREAKLMGLETNQFCHDYNRVGAQGSRHVASPLRFESIFPRHRSDDDL 1604
Query: 4732 TFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEV 4911
TFWMAVKKRL F E R +L D++ +G L+Y+N K L F DQGLL+ C+NDFE
Sbjct: 1605 TFWMAVKKRLRFSEEFLERAKLKDSYSVGNLLYQNLKEKLSLSFSWDQGLLDECLNDFET 1664
Query: 4912 KKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILV 5091
KKL KS+AT+ +HSIRSD+DW+++ +FLFMKSQLCTK+EKQ+VDAKAGQTLACF HL+L
Sbjct: 1665 KKLLKSKATLANHSIRSDIDWSMDKIFLFMKSQLCTKYEKQYVDAKAGQTLACFSHLVLA 1724
Query: 5092 QFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEY 5271
+FAP+CRY+E+ +R L EEIYIHSNKNF+DLN+W KFF VESDYEAFDA QD Y
Sbjct: 1725 KFAPYCRYMEKMLRRNLKEEIYIHSNKNFNDLNDWVVKFFEEGEKVESDYEAFDASQDHY 1784
Query: 5272 ILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTM 5451
+L+FE+ +M+D GLP+ I+ YIDLKC L CKLGHFA+MRFTGEF TFLFNTLANMAFT
Sbjct: 1785 VLAFEVCVMEDMGLPNWFINDYIDLKCTLGCKLGHFAIMRFTGEFSTFLFNTLANMAFTF 1844
Query: 5452 CRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYG 5631
RYE P+AFAGDDMC L + FE+V ++SLKAKV RTE PMFCGW L+ YG
Sbjct: 1845 ARYECDHKTPIAFAGDDMCMLKACKVSDKFEDVLSKLSLKAKVIRTEMPMFCGWNLSRYG 1904
Query: 5632 IVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVR 5811
IVKEPELV+NRF VA + G + ECLENYAIEVSYAY+L E+LYEVLK E Q++YHQAVVR
Sbjct: 1905 IVKEPELVFNRFMVAKKRGNIDECLENYAIEVSYAYSLGEKLYEVLKREEQVEYHQAVVR 1964
Query: 5812 FIVTHIDKLKTKVKDLFQEQS 5874
FIV +DKLKTKVKDLF +Q+
Sbjct: 1965 FIVQRLDKLKTKVKDLFSDQN 1985
Score = 295 bits (756), Expect = 1e-76
Identities = 159/423 (37%), Positives = 239/423 (56%), Gaps = 6/423 (1%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIG 234
MA ++ +T +E +K D + I V + + + HFA+ ++ K+ L+++G
Sbjct: 1 MASVTVRTPMEKFFAANDKNDQRSILTSGVNFVKKFCDDKGIHFAYYVNDRKKEALTNLG 60
Query: 235 VELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKLNCVV-----ARQN 399
V L P +L HSHPF KTLENH+L VLP+++ N ++F S+K+ K+N V+ N
Sbjct: 61 VTLHPIPFLTHSHPFCKTLENHLLINVLPNLLGNGHWVFTSVKKAKVNSVIKLAGGVSNN 120
Query: 400 ITLLNEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGKHKSFFFHDEVHHWG 579
+ ++N + +D RY N ++ F +++ K K F HDEVHHW
Sbjct: 121 VDIVNRCICAKDFGRYDFEPGSVDQKINILSKDHLFPKNFIRSVRK-KKIFIHDEVHHWS 179
Query: 580 KKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVRDKLFFFPDGVSSEGY 759
N+ +FL ++ +VV+PPELLGG QN +Y F++ DKLFFFPDG SE Y
Sbjct: 180 HLNMIQFLEETATPLLLCSVVFPPELLGGIKTPQNSALYGFQVDGDKLFFFPDGSRSEMY 239
Query: 760 QQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITEDSLFFNDFDVVDMH 939
+QP+NL WLF+ Y+ +T+ S YAHHLF+I G+ IT+ FF DF+ +DM
Sbjct: 240 EQPSNLNWLFEASYIHTSAGTYTVKMVGSFYAHHLFQISKGEKITDSVRFFADFNTIDMS 299
Query: 940 HMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQIIGDDVEVKEFLFFEQ 1119
+ K RFK YDL P+ H+ K+Y+YLLCLKKPDVES +AKLRQ++ D+ + + FF
Sbjct: 300 VIHKERFKYYDLIPIKKSHIEKIYTYLLCLKKPDVESAIAKLRQLMEDEQDCRVVEFFCT 359
Query: 1120 LCKRFI-ERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSNIFDFLYDLGTLCI 1296
K+ I + + +FG S L+ FI P+ W NIF FL+ L T+ +
Sbjct: 360 FAKKLITDTKGAINLFGDSFLQKAKDSFIMALPNSIASCFDRWHGLNIFHFLFTLDTIRV 419
Query: 1297 QID 1305
+++
Sbjct: 420 KVE 422
>gb|AFA43556.1| replicase polyprotein, partial [Citrus leaf blotch virus]
Length = 614
Score = 962 bits (2488), Expect = 0.0
Identities = 470/615 (76%), Positives = 525/615 (85%)
Frame = +1
Query: 4045 VLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRAKERV 4224
VLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TRAK R
Sbjct: 1 VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRF 60
Query: 4225 SFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAIDEMDR 4404
SF + LGG+DDF L I+ GEK+ MV+ NLI K G DE+DR
Sbjct: 61 SFCSTCLGGIDDFKIKKGESLVTSILQGEKITFERLNMMVKCNLI-KQEKKNGCSDEVDR 119
Query: 4405 EERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDLIRLK 4584
EERLEGDPFLKPFIF+GQRI + + + E V I+EPRCQTHLYI+EPNF CYNFD IR K
Sbjct: 120 EERLEGDPFLKPFIFLGQRIPKDQEKIEEVEIEEPRCQTHLYITEPNFGLCYNFDFIREK 179
Query: 4585 EEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVKKRLV 4764
E+REYREDMLVT+QFCD+Y+K T GP+RFKAIYPKHS DD+MTFWMAVKKRL+
Sbjct: 180 EQREYREDMLVTNQFCDSYDKVHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVKKRLI 239
Query: 4765 FRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQATIK 4944
FR E+EN +RLS AHL+GGL+YRNFK L+F DQGLLE +N FE KKL+KS+ TIK
Sbjct: 240 FREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLLEDSINAFERKKLEKSRGTIK 299
Query: 4945 SHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEQ 5124
SHSIRSD+DWALNDVFLFMKSQLCTK+EKQFVDAKAGQTLACFQHLILVQFAPWCRYLE
Sbjct: 300 SHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLET 359
Query: 5125 QIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIHLMKD 5304
QIR+QLPEEIY+HSNKNFDDLN+W KKFF RDI VESDYEAFDA QDEYILSFEIHLMKD
Sbjct: 360 QIRNQLPEEIYVHSNKNFDDLNQWVKKFFQRDIFVESDYEAFDASQDEYILSFEIHLMKD 419
Query: 5305 AGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPV 5484
A P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFT+CRYEWRRGQP+
Sbjct: 420 ANFPQTVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPI 479
Query: 5485 AFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPELVYNR 5664
AFAGDDMCALNNLP+ + F+++F+ +SLKAKVERTE PMFCGWRLTPYGIVKEPELVYNR
Sbjct: 480 AFAGDDMCALNNLPVCHAFDDLFELMSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNR 539
Query: 5665 FQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT 5844
FQVAIEEGKVMECLENYAIEVSYAY+LSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT
Sbjct: 540 FQVAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT 599
Query: 5845 KVKDLFQEQSSDEDI 5889
KV+DLF EQSSDEDI
Sbjct: 600 KVRDLFLEQSSDEDI 614
>gb|AFA43558.1| replicase polyprotein, partial [Citrus leaf blotch virus]
Length = 614
Score = 959 bits (2478), Expect = 0.0
Identities = 468/615 (76%), Positives = 524/615 (85%)
Frame = +1
Query: 4045 VLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAWTRAKERV 4224
VLLV+S +EK+ ++ I +TFGESQGLTFNHVCI+LSES+A+SNE RW VA TRAK R
Sbjct: 1 VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRF 60
Query: 4225 SFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGGAIDEMDR 4404
SF + LGG+DDF L I+ GEK+ MV+ NLI K G DE+DR
Sbjct: 61 SFCSTCLGGIDDFKIKKGESLVTSILQGEKITFERLNMMVKCNLI-KQEKKNGCSDEVDR 119
Query: 4405 EERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYNFDLIRLK 4584
EERLEGDPFLKPFIF+GQRI + + + E V I+EPRCQTHLYI+EPNF CYNFD IR K
Sbjct: 120 EERLEGDPFLKPFIFLGQRIPKDQEKIEEVEIEEPRCQTHLYITEPNFGLCYNFDFIREK 179
Query: 4585 EEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWMAVKKRLV 4764
E+REYREDMLVT+QFCD+Y+K T GP+RFKAIYPKHS DD+MTFWMAVKKRL+
Sbjct: 180 EQREYREDMLVTNQFCDSYDKVHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVKKRLI 239
Query: 4765 FRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLKKSQATIK 4944
FR E+EN +RLS AHL+GGL+YRNFK L+F DQGLLE +N FE KKL+KS+ TI+
Sbjct: 240 FREEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLLEDSINAFERKKLEKSRGTIR 299
Query: 4945 SHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEQ 5124
SHSIRSD+DWALNDVFLFMKSQL TK+EKQFVDAKAGQTLACFQHLILVQFAPWCRYLE
Sbjct: 300 SHSIRSDIDWALNDVFLFMKSQLFTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLET 359
Query: 5125 QIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSFEIHLMKD 5304
QIR+QLPEEIY+HSNKNFDDLN+W KKFF RDICVESDYEAFDA QDEYILSFEIHLMKD
Sbjct: 360 QIRNQLPEEIYVHSNKNFDDLNQWVKKFFQRDICVESDYEAFDASQDEYILSFEIHLMKD 419
Query: 5305 AGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPV 5484
A P +IDAYIDLKCKL CKLGHF++MRFTGEFCTFLFNTLANMAFT+CRYEWRRGQP+
Sbjct: 420 ANFPQTVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPI 479
Query: 5485 AFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKEPELVYNR 5664
AFAGDDMCALNNLP+ + F+++F+ +SLKAKVERTE PMFCGWRLTPYGIVKEPELVYNR
Sbjct: 480 AFAGDDMCALNNLPVCHAFDDLFELMSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNR 539
Query: 5665 FQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT 5844
FQVAIEEGKVMECLENYAIEVSYAY+LSE LYEVLKSERQIQYHQAVVRFIVTHIDKLKT
Sbjct: 540 FQVAIEEGKVMECLENYAIEVSYAYSLSEGLYEVLKSERQIQYHQAVVRFIVTHIDKLKT 599
Query: 5845 KVKDLFQEQSSDEDI 5889
KV+DLF EQSSDEDI
Sbjct: 600 KVRDLFLEQSSDEDI 614
>ref|YP_008997790.1| replication-associated polyprotein [Apricot vein clearing associated
virus] gi|571026291|emb|CDF66416.2|
replication-associated polyprotein [Apricot vein clearing
associated virus]
Length = 1679
Score = 941 bits (2433), Expect = 0.0
Identities = 534/1184 (45%), Positives = 715/1184 (60%), Gaps = 52/1184 (4%)
Frame = +1
Query: 2488 SFRGRKAAFLTKVGA-DYGHNGMLYPVNDWVPSLDAILEICDPDSNYNSALIQWYEEGAS 2664
SFRGR + F + DYGHNG Y +W LD + D +N+ L+Q Y++G+
Sbjct: 510 SFRGRSSFFFARSNEIDYGHNGFKYRTENWFAELD---DFIPSDLIFNACLVQVYDKGSK 566
Query: 2665 LGLHRDNEVVYGDTSILTVNLKGSCNFRIEVDKRIVEFAMEDASFFTMPSGFQKRARHGV 2844
+G H+DNE Y ILTVN G F + + F + D + + ++ RH V
Sbjct: 567 IGFHKDNEQCYAGYPILTVNF-GLALFEFDSGEA---FNLTDGDTILLSGDYLRKKRHRV 622
Query: 2845 TA-TKNRVSITFRTHVRMMSGKAISE-SKELKKKRNKCLIVAVAGALKSSEEKVCQALIS 3018
T+ + +R+S+TFR HV M+ + S K +NKC+I AVA AL + V ++
Sbjct: 623 TSLSDSRISLTFRRHVCRMNKSPLEFFSNNGKLGKNKCIIHAVAMALGQTSNTVANKIV- 681
Query: 3019 ANKSYWLNFIQSDAGASLEDCNELAECLKVNLEVHMNDEIKVMDFG-QTVIKIKFEA--N 3189
A + L + D + + + ++ + DE + M+ + +IK F
Sbjct: 682 AQRPDLLQCLVDDEMLDKQTTETICVIMNLHATIVNEDEGETMELNPEGLIKSSFSVLDE 741
Query: 3190 HFSALREFINMPRSSFSHLQKKANVSAVKGLVEKISKCPHYNLLPFNANGEFFQMLRKSF 3369
H L + N + +++ C + ++ + A+ E L SF
Sbjct: 742 HMMVLSDIPNCRSKKGIDICMSPDLANSNCAANYEVTCQNLQVIQYQADHERAIKLMNSF 801
Query: 3370 LQRTTGVVLGEVLDNGAKFFERSFKLSEECSNISTELHCMIGFAGSGKSKVMQD------ 3531
L TTG VL E++ G++FF ++E S+ EL + GFAGSGKS + +
Sbjct: 802 LAGTTGAVLNELVFKGSRFFTFMDSVNERKSDFVEELSFVPGFAGSGKSLGLLNEVKRIS 861
Query: 3532 ---WLGKVKKS--------------------SFCVVSPRTVLTSDWIFKLGLSGRDGNKV 3642
L K KK S C++SPR L DW KLG S + V
Sbjct: 862 REIHLAKEKKGMGKGSGKGHEKKERNRGNLKSMCIISPRRNLADDWETKLGPSALEHCSV 921
Query: 3643 CTFESFIKRERSNLELIVIDEVTLFPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNE 3822
TFE K S ++LIV+DE+TLFPNGYID LI+ ++ +++L+FDPLQARY +
Sbjct: 922 TTFEVLFKASISKIKLIVVDELTLFPNGYIDLLIFRIRTESPDCKLILIFDPLQARYDSA 981
Query: 3823 KDKDILTFTHDVDRLVNDMNINYLYGSFRLNKNFFDRFNVDLPMIRRDESDSKIWIVNGP 4002
+D+ IL HDVD ++ D ++Y+Y S R + FN+ ++++E D++
Sbjct: 982 QDRAILGSEHDVDLILGDSEVDYMYQSKRFESE--ELFNL-FEDLKKNEVDAE-----SR 1033
Query: 4003 EDIKGS-FGERPFP----------------DVLLVDSQVEKEMYNRQIRTITFGESQGLT 4131
E KG+ F R + DVLLV S E ++ I+T+TFGESQGLT
Sbjct: 1034 ETGKGAKFRPRMYTNLLTMKVEEENQGNPIDVLLVGSFDEAGLFASSIKTMTFGESQGLT 1093
Query: 4132 FNHVCIVLSESTASSNELRWNVAWTRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGE 4311
+H I+LSE++A S++ RW VA TRA+++V+FL HL GL+ FL+ + L ++N
Sbjct: 1094 VDHAAILLSENSALSDDHRWLVALTRARKKVTFLCLHLSGLNGFLSTMENRLVAAVINKG 1153
Query: 4312 KLDHAFYRKMVRSNLIFKDLVMGGAIDEMDREERLEGDPFLKPFIFIGQRINEQEIECET 4491
+ MVR+ L + DE+DRE+RLEGD FLK IF+GQR E E
Sbjct: 1154 LVTKKRLSSMVRAKLNYVKFKGLAGKDEVDREDRLEGDLFLKGVIFLGQRCEIMEPEIVE 1213
Query: 4492 VSIQEPRCQTHLYISEPNFAQCYNFDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNAS 4671
+ + +TH ++ + NFAQCYNFD IR KE RE+R VT+QF DNY
Sbjct: 1214 PVMAKEDMKTHFFVCQENFAQCYNFDNIRAKELREFRIGHRVTNQFIDNYEIVQHVQKKH 1273
Query: 4672 TVGPLRFKAIYPKHSHDDEMTFWMAVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSF 4851
T GPLRF+AIYP+H DD++TF MAV KRL F +E + R +L AH G +++ N +
Sbjct: 1274 TAGPLRFEAIYPRHCADDDVTFLMAVHKRLRFSNEMKEREKLERAHGTGSILFHNLIQKL 1333
Query: 4852 DLKFVHDQGLLERCVNDFEVKKLKKSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEK 5031
L F D L E CVNDFE KKL+KS+A + +HSIRSD DW+ N VFLFMKSQLCTK+EK
Sbjct: 1334 GLNFTWDNQLFEECVNDFECKKLEKSKAVLANHSIRSDNDWSPNWVFLFMKSQLCTKYEK 1393
Query: 5032 QFVDAKAGQTLACFQHLILVQFAPWCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFF 5211
Q+VDAKAGQTLACFQH+ILV FAP+CRY+E+Q+R QLP EIYIHSNKNF+DLNEW KK
Sbjct: 1394 QYVDAKAGQTLACFQHMILVTFAPYCRYMEKQLRAQLPGEIYIHSNKNFNDLNEWVKKHA 1453
Query: 5212 MRDICVESDYEAFDACQDEYILSFEIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMR 5391
D+CVESDYEAFDA QD+YILSFE+ +M+ +P+ +I AYIDLK L CKLGHFA+MR
Sbjct: 1454 GDDLCVESDYEAFDASQDQYILSFELFMMRHMHIPEQIIQAYIDLKVNLGCKLGHFAIMR 1513
Query: 5392 FTGEFCTFLFNTLANMAFTMCRYEWRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLK 5571
FTGEF TFLFNTLANMAFTMCRYEW G P+AFAGDDMCAL NL + F VF++ISLK
Sbjct: 1514 FTGEFSTFLFNTLANMAFTMCRYEWNSGDPIAFAGDDMCALKNLKVTDQFNNVFEKISLK 1573
Query: 5572 AKVERTERPMFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSE 5751
AK + TE PMFCGWRL+ +GIVKEPELVYNRF VA+E G V +CLENYAIEVSYAY+L E
Sbjct: 1574 AKTQITEVPMFCGWRLSRFGIVKEPELVYNRFMVALERGNVKDCLENYAIEVSYAYSLGE 1633
Query: 5752 RLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVKDLFQEQSSDE 5883
RL+++LK E Q++YHQAVVRFIV H+ L+TKVKDLF EQS+++
Sbjct: 1634 RLFDILKREEQLEYHQAVVRFIVKHLGNLRTKVKDLFAEQSNED 1677
Score = 282 bits (721), Expect = 1e-72
Identities = 166/417 (39%), Positives = 235/417 (56%), Gaps = 7/417 (1%)
Frame = +1
Query: 55 MALLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSS-- 228
MALL + +LG+F + ++ IYN E R F + KK S
Sbjct: 1 MALLYRTPQVN-LLGSFPQKHVEIIYNLQFERFKKICICRFCIFLTHSEKNQKKVASIRG 59
Query: 229 -IGVELFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKLNCVVARQNIT 405
+GV L P YL HSHPFSK LENHIL VLP I ++F SIK K+ + + +
Sbjct: 60 WLGVPLHPTPYLAHSHPFSKMLENHILLNVLPGHITGS-WVFSSIKPSKVESLATKGKKS 118
Query: 406 LL---NEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGKHKSFFFHDEVHHW 576
+L N ++ +D RY +V+ S + + + + F K ++ HDEVHHW
Sbjct: 119 VLKTINRLLCAKDFGRY-DVDTDSSVIRSISREAPDILPEPFVRAVKGRNVMIHDEVHHW 177
Query: 577 GKKNLFKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR-DKLFFFPDGVSSE 753
++ FL+R +P R VF+VVYP ELL G SQNPKMY F+ + DK+ FFPDG +SE
Sbjct: 178 TLDDMLGFLDRARPNRFVFSVVYPVELLAGILESQNPKMYKFQDSKSDKIVFFPDGRASE 237
Query: 754 GYQQPANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITEDSLFFNDFDVVD 933
GY+Q ANL WLF + WT+ R S Y+HHLFE+VPG T++ FFNDF+ +D
Sbjct: 238 GYEQRANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNYFTDEIRFFNDFETID 297
Query: 934 MHHMFKNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQIIGDDVEVKEFLFF 1113
+ +FK+RF D P++ V +VYSYL+CLKKPD++S +AKL+Q++GDD++V+ +FF
Sbjct: 298 LQCIFKSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLKQLMGDDLDVRVQVFF 357
Query: 1114 EQLCKRFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSNIFDFLYDLG 1284
L R + + +F S++ KF+ F PD + TWK N F+ LG
Sbjct: 358 RSLVHRILNESECFSLFDVSIVNKWKKKFLDFAPDWLLNGFMTWKSGN---FIKKLG 411
>gb|AKN08998.1| replicase [Apricot vein clearing associated virus]
Length = 2021
Score = 949 bits (2452), Expect = 0.0
Identities = 564/1341 (42%), Positives = 764/1341 (56%), Gaps = 68/1341 (5%)
Frame = +1
Query: 2068 RLINVPADGNCFFHAITEVYQCTEDHVQMRKNFSEWLLDRDPYHHLGKLIAKDGVFMEHE 2247
++I ADG CFFH + + F ++ D H ++G + E
Sbjct: 713 QIIQASADGRCFFHTLLSTSLFRGSVNNLVNTFCNFIKSLD--EHEAARQVQEGAYPEGW 770
Query: 2248 LIYLFALSRGLKIVVH---FEDKIFQFGEG-------EEEGH---IHCDGHHFMAYETYT 2388
+I LF + G+++ H + + G G + E H + C T
Sbjct: 771 MINLFLANYGIRMCCHQHSADGVTIETGSGPISFCSLKMENHFDYLRCLSSGVSKEHTGL 830
Query: 2389 FSRMNFK---LLDNLEGYHDIRLEKFSFAPEHFVCHSFRGRKAAFLTKVGA-DYGHNGML 2556
+ + +++ L+G SFRGR + F + DYGHNG
Sbjct: 831 LGKTTYPSGPIINALQGLKP---------------KSFRGRSSFFFARSNEIDYGHNGFK 875
Query: 2557 YPVNDWVPSLDAILEICDPDSNYNSALIQWYEEGASLGLHRDNEVVYGDTSILTVNLKGS 2736
Y +W LD + D +N+ L+Q Y+ G+ + H+DNE Y ILTVN G
Sbjct: 876 YRTENWFAELD---DFIPSDLIFNACLVQVYDRGSKISFHKDNEQCYAGYPILTVNF-GL 931
Query: 2737 CNFRIEVDKRIVEFAMEDASFFTMPSGFQKRARHGVTATKN-RVSITFRTHVRMMSGKAI 2913
F + + F + D + + ++ RH VT+ + R+S+TFR HV M+ +
Sbjct: 932 ALFEFDSGEA---FNLTDGDTILLSGDYLRKKRHRVTSLSDGRISLTFRRHVCRMNKSPL 988
Query: 2914 SE-SKELKKKRNKCLIVAVAGALKSSEEKVCQALISANKSYWLNFIQSDAGASLEDCNEL 3090
S + K +NKC+I AVA AL + V ++ A + L + D + +
Sbjct: 989 EFFSNDGKLGKNKCIIHAVAMALGQTSNTVANKIV-AQRPDLLQCLVDDEMLDKQTTETI 1047
Query: 3091 AECLKVNLEVHMNDEIKVMDFG-QTVIKIKFEA--NHFSALREFINMPRSSFSHLQKKAN 3261
+ ++ + DE + M+ + +IK F H L + N + +
Sbjct: 1048 CVIMNLHATIVNEDEGETMELNPEGLIKSSFSVLDEHMMVLSDVPNCRSKKGIDICMSPD 1107
Query: 3262 VSAVKGLVEKISKCPHYNLLPFNANGEFFQMLRKSFLQRTTGVVLGEVLDNGAKFFERSF 3441
++ C + ++ + A+ E L SFL TTG VL E++ G++FF
Sbjct: 1108 LANSNCAANYEVTCQNLQVIQYQADHERAIKLMNSFLAGTTGAVLNELVFKGSRFFTFMD 1167
Query: 3442 KLSEECSNISTELHCMIGFAGSGKSKVMQD---------WLGKVKK-------------- 3552
++E S+ EL + GFAGSGKS + + L K KK
Sbjct: 1168 SVNERKSDFVEELSFVPGFAGSGKSLGLLNEVKRISREIHLAKEKKRMGKGNGKGHEKKE 1227
Query: 3553 ------SSFCVVSPRTVLTSDWIFKLGLSGRDGNKVCTFESFIKRERSNLELIVIDEVTL 3714
S C++SPR L DW KLG S + V TFE F K S ++LIV+DE+TL
Sbjct: 1228 RNRGNLKSMCIISPRRNLADDWETKLGPSALEHCSVTTFEVFFKASISKIKLIVVDELTL 1287
Query: 3715 FPNGYIDWLIYDLQASKSKAEVVLLFDPLQARYHNEKDKDILTFTHDVDRLVNDMNINYL 3894
FPNGYID LI+ ++ +++L+FDPLQARY + +D+ IL HDVD ++ D ++Y+
Sbjct: 1288 FPNGYIDLLIFRIRTESPDCKLILIFDPLQARYDSAQDRAILGSEHDVDLILGDSEVDYM 1347
Query: 3895 YGSFRLNKNFFDRFNVDLPMIRRDESDSKIWIVNGPEDIKGS-FGERPFP---------- 4041
Y S R + FN+ +++DE D++ E KG+ F R +
Sbjct: 1348 YQSKRFESE--ELFNL-FEDLKKDEVDAE-----SRETGKGAKFRPRMYTNLLTMKVEEE 1399
Query: 4042 ------DVLLVDSQVEKEMYNRQIRTITFGESQGLTFNHVCIVLSESTASSNELRWNVAW 4203
DVLLV S E ++ I+T+TFGESQGLT +H I+LSE++A S++ RW VA
Sbjct: 1400 NQGNPIDVLLVGSFDEAGLFASSIKTMTFGESQGLTVDHAAILLSENSALSDDHRWLVAL 1459
Query: 4204 TRAKERVSFLVSHLGGLDDFLTNCKAELPRRIMNGEKLDHAFYRKMVRSNLIFKDLVMGG 4383
TRA+++V+FL HL GL+ FL+ + L ++N + MVR+ L +
Sbjct: 1460 TRARKKVTFLCLHLSGLNGFLSTMENRLIAAVINKGLVTKKRLSSMVRAKLNYVKFKGLA 1519
Query: 4384 AIDEMDREERLEGDPFLKPFIFIGQRINEQEIECETVSIQEPRCQTHLYISEPNFAQCYN 4563
DE+DRE+RLEGD FLK IF+GQR E E + + +TH ++ + NFAQCYN
Sbjct: 1520 GKDEVDREDRLEGDLFLKGVIFLGQRCEIVEPEIVEPVMAKEDMKTHFFVCQENFAQCYN 1579
Query: 4564 FDLIRLKEEREYREDMLVTDQFCDNYNKKGPKCNASTVGPLRFKAIYPKHSHDDEMTFWM 4743
FD IR KE RE+R VT+QF DNY T GPLRF+AIYP+H DD++TF M
Sbjct: 1580 FDNIRAKELREFRIGHRVTNQFIDNYEIVQHGQKKHTAGPLRFEAIYPRHCADDDVTFLM 1639
Query: 4744 AVKKRLVFRSEDENRRRLSDAHLIGGLIYRNFKRSFDLKFVHDQGLLERCVNDFEVKKLK 4923
AV KRL F +E + R +L AH G +++ N + L F D L E CVNDFE KKL+
Sbjct: 1640 AVHKRLRFSNEMKEREKLERAHGTGSILFHNLIQKLGLNFTWDNQLFEECVNDFECKKLE 1699
Query: 4924 KSQATIKSHSIRSDVDWALNDVFLFMKSQLCTKFEKQFVDAKAGQTLACFQHLILVQFAP 5103
KS+A + +HSIRSD DW+ N VFLFMKSQLCTK+EKQ+VDAKAGQTLACFQH+ILV FAP
Sbjct: 1700 KSKAVLANHSIRSDNDWSPNWVFLFMKSQLCTKYEKQYVDAKAGQTLACFQHMILVTFAP 1759
Query: 5104 WCRYLEQQIRDQLPEEIYIHSNKNFDDLNEWTKKFFMRDICVESDYEAFDACQDEYILSF 5283
+CRY+E+Q+R QLP EIYIHSNKNF+DLNEW KK D+CVESDYEAFDA QD+YILSF
Sbjct: 1760 YCRYMEKQLRAQLPGEIYIHSNKNFNDLNEWVKKHAGDDLCVESDYEAFDASQDQYILSF 1819
Query: 5284 EIHLMKDAGLPDALIDAYIDLKCKLSCKLGHFAVMRFTGEFCTFLFNTLANMAFTMCRYE 5463
E+ +M+ +P+ +I AYIDLK L CKLGHFA+MRFTGEF TFLFNTLANMAFTMCRYE
Sbjct: 1820 ELFMMRHMHIPEQIIQAYIDLKVNLGCKLGHFAIMRFTGEFSTFLFNTLANMAFTMCRYE 1879
Query: 5464 WRRGQPVAFAGDDMCALNNLPLRYDFEEVFKRISLKAKVERTERPMFCGWRLTPYGIVKE 5643
W G P+AFAGDDMCAL NL + F VF++ISLKAK + TE PMFCGWRL+ +GIVKE
Sbjct: 1880 WNSGDPIAFAGDDMCALKNLKVTDQFNNVFEKISLKAKTQVTEVPMFCGWRLSRFGIVKE 1939
Query: 5644 PELVYNRFQVAIEEGKVMECLENYAIEVSYAYNLSERLYEVLKSERQIQYHQAVVRFIVT 5823
PELVYNRF VA+E G V +CLENYAIEVSYAY+L ERL+++LK E Q++YHQAVVRFIV
Sbjct: 1940 PELVYNRFMVALERGNVKDCLENYAIEVSYAYSLGERLFDILKREEQLEYHQAVVRFIVK 1999
Query: 5824 HIDKLKTKVKDLFQEQSSDED 5886
H+ L+TKVKDLF EQ SDED
Sbjct: 2000 HLGNLRTKVKDLFAEQ-SDED 2019
Score = 316 bits (810), Expect = 6e-83
Identities = 183/487 (37%), Positives = 269/487 (55%), Gaps = 4/487 (0%)
Frame = +1
Query: 61 LLSNKTAIECMLGNFEKTDIKRIYNPAVETLVSHSEFRNRHFAFAMDPFLKKKLSSIGVE 240
+L+ K+ E N E I + A ++L + HFA+ + LK+KLSS+GV
Sbjct: 4 ILNYKSPFEKFFSNLEMAKKTEIISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVP 63
Query: 241 LFPNGYLPHSHPFSKTLENHILYVVLPSVINNDKFLFCSIKEKKLNCVVARQNITLL--- 411
L P YL HSHPFSK LENHIL VLP I ++F SIK K+ + + ++L
Sbjct: 64 LHPTPYLAHSHPFSKMLENHILLNVLPGHITGS-WVFSSIKPSKVESLATKGKKSVLKTV 122
Query: 412 NEIVEGRDVSRYKEVEFVHSFSFNSNLDNYRFSNQAFKTMGKHKSFFFHDEVHHWGKKNL 591
N ++ +D RY +V+ S + + + + F K ++ HDEVHHW ++
Sbjct: 123 NRLLCAKDFGRY-DVDTDSSVIRSISREAPDILPEPFIRAVKGRNVMIHDEVHHWTLDDM 181
Query: 592 FKFLNRFQPRRMVFTVVYPPELLGGYNNSQNPKMYTFKIVR-DKLFFFPDGVSSEGYQQP 768
FL+R +P R VF+VVYP ELL G SQNPKMY F+ + DK+ FFPDG +SEGY+Q
Sbjct: 182 LGFLDRARPNRFVFSVVYPVELLAGILESQNPKMYKFQDSKSDKIVFFPDGKASEGYEQR 241
Query: 769 ANLFWLFKNKYLVDGDRCWTIVRHTSKYAHHLFEIVPGKLITEDSLFFNDFDVVDMHHMF 948
ANL WLF + WT+ R S Y+HHLFE+VPG T++ FFNDF+ +D+ +F
Sbjct: 242 ANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNYFTDEIRFFNDFETIDLQCIF 301
Query: 949 KNRFKRYDLFPVNYHHVYKVYSYLLCLKKPDVESGLAKLRQIIGDDVEVKEFLFFEQLCK 1128
K+RF D P++ V +VYSYL+CLKKPD++S +AKL+Q++GDD++V+ +FF L
Sbjct: 302 KSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLKQLMGDDLDVRVQVFFRSLVH 361
Query: 1129 RFIERGTSYGMFGHSLLEVLFGKFIKFCPDIFVRWTKTWKCSNIFDFLYDLGTLCIQIDR 1308
R + + +F S++ KF+ F PD + TWK N FDFL L L +++
Sbjct: 362 RILNESECFSLFDVSIVNKWKKKFLDFAPDWLLHGFMTWKSGNFFDFLMSLKILQVEV-- 419
Query: 1309 GTCYSHIIETFPFEVVPLDSSVFLDPLPFFDSNENFNEERVDDGYLERVKLPFFNYKGDP 1488
P E+V DS+ + + FD + + + V G+ +R +P +
Sbjct: 420 -----------PTEIV--DSTFERNFVSLFDVDPHVSAPLVIKGF-KRFMMPHSEVEKRV 465
Query: 1489 RKKEVYH 1509
+ E H
Sbjct: 466 NRDEASH 472
>gb|ACH73185.1| movement protein [Dweet mottle virus]
Length = 362
Score = 681 bits (1757), Expect = 0.0
Identities = 343/362 (94%), Positives = 357/362 (98%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRVKLDQSIIGSDEI+KLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN
Sbjct: 1 MASLINVSSLVNRVKLDQSIIGSDEINKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N+KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNAKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEES+KAF+NMFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESKKAFENMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKRTPLIGNLAIKGFGR+VMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG
Sbjct: 241 LDEGKRTPLIGNLAIKGFGRKVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
+DRL+KYLEEQALEQARSSTDQ +++APKFKTIEV GL+TVHDLKDKIDKAESST SDTG
Sbjct: 301 NDRLRKYLEEQALEQARSSTDQQLVKAPKFKTIEVNGLETVHDLKDKIDKAESSTTSDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362
>ref|NP_624334.1| movement protein [Citrus leaf blotch virus]
gi|81964040|sp|Q91QZ2.1|MOVP_CLBVS RecName: Full=Putative
movement protein; Short=MP; AltName: Full=Cell-to-cell
transport protein gi|14270250|emb|CAC39423.1|
hypothetical protein [Citrus leaf blotch virus]
Length = 362
Score = 679 bits (1753), Expect = 0.0
Identities = 342/362 (94%), Positives = 358/362 (98%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRVKLDQSIIGSDEI+KLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN
Sbjct: 1 MASLINVSSLVNRVKLDQSIIGSDEINKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N+KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNAKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEES+KAF+NMFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESKKAFENMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKRTPLIG+LAIKGFGR+VMPVRRRNLTT+NLMKDYVSHVKSETASLKRSQSGRDWG
Sbjct: 241 LDEGKRTPLIGSLAIKGFGRKVMPVRRRNLTTRNLMKDYVSHVKSETASLKRSQSGRDWG 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
+DRL+KYLEEQALEQARSSTD +++APKFKTIEVTGL+TVHDLKDKIDKAESSTASDTG
Sbjct: 301 NDRLRKYLEEQALEQARSSTDHQLVKAPKFKTIEVTGLETVHDLKDKIDKAESSTASDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362
>gb|ACF94739.1| putative movement protein [Citrus leaf blotch virus]
Length = 362
Score = 677 bits (1748), Expect = 0.0
Identities = 341/362 (94%), Positives = 358/362 (98%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRVKLDQSIIGSDEI+KLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQA+
Sbjct: 1 MASLINVSSLVNRVKLDQSIIGSDEINKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAS 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N+KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNAKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLLHKIECDTPKWSLCNI+EQVEDEEES+KAF+NMFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLHKIECDTPKWSLCNIMEQVEDEEESKKAFENMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKRTPLIGNLAIKGFGR+VMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG
Sbjct: 241 LDEGKRTPLIGNLAIKGFGRKVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
++RL+KYLEEQALEQARSSTDQ +++APKFKTIEV GL+TVHDLKDKIDKAESSTASDTG
Sbjct: 301 NNRLRKYLEEQALEQARSSTDQQLVKAPKFKTIEVNGLETVHDLKDKIDKAESSTASDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362
>gb|ACF94741.1| putative movement protein [Citrus leaf blotch virus]
Length = 362
Score = 672 bits (1733), Expect = 0.0
Identities = 340/362 (93%), Positives = 356/362 (98%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRV+LDQSIIGSDEI+KLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN
Sbjct: 1 MASLINVSSLVNRVELDQSIIGSDEINKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N+KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNAKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLL+KIE DTPKWSLCNIIEQVEDEEES+KAF+NMFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLYKIESDTPKWSLCNIIEQVEDEEESKKAFENMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKRTPLIGNLAIKGFGR+VMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG
Sbjct: 241 LDEGKRTPLIGNLAIKGFGRKVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
+DRL+KYLEEQALEQARSSTDQ +++ PKFKTIEVTGL+TVH LKDKIDKAESSTASDTG
Sbjct: 301 NDRLRKYLEEQALEQARSSTDQQLVKVPKFKTIEVTGLETVHYLKDKIDKAESSTASDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362
>gb|ALZ41788.1| movement protein [Citrus leaf blotch virus]
Length = 362
Score = 667 bits (1720), Expect = 0.0
Identities = 336/362 (92%), Positives = 354/362 (97%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRV+LDQSIIGSDEI+KLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN
Sbjct: 1 MASLINVSSLVNRVRLDQSIIGSDEINKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N+KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNAKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEES+KAF++MFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESKKAFEDMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKRTPLIGNLAIKGFGR+VMPVRRRNLTTKNLM+DYVSHVKSETASLK SQSGRDW
Sbjct: 241 LDEGKRTPLIGNLAIKGFGRKVMPVRRRNLTTKNLMRDYVSHVKSETASLKGSQSGRDWS 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
+++L+KYLEEQALEQARSSTDQ II+ PKFKTIEVTG +TVHDLK+KIDKAESS ASDTG
Sbjct: 301 NNKLRKYLEEQALEQARSSTDQQIIKVPKFKTIEVTGFETVHDLKEKIDKAESSAASDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362
>gb|AFA43528.1| movement protein [Citrus leaf blotch virus]
gi|375271885|gb|AFA43531.1| movement protein [Citrus leaf
blotch virus] gi|375271888|gb|AFA43533.1| movement
protein [Citrus leaf blotch virus]
gi|375271893|gb|AFA43537.1| movement protein [Citrus leaf
blotch virus]
Length = 362
Score = 667 bits (1720), Expect = 0.0
Identities = 338/362 (93%), Positives = 349/362 (96%)
Frame = +3
Query: 5892 MAYLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAIKLQAN 6071
MA LINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEA+KLQAN
Sbjct: 1 MASLINVSSLVNRVKLDQSIIGSDEISKLYGSDAPLVFKDEVKMVIPGNAEGEAMKLQAN 60
Query: 6072 ILTADRLQSIKNSKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTKVETA 6251
ILTADRLQSI+N KVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRT+ ETA
Sbjct: 61 ILTADRLQSIRNVKVNGKEAAYLHLGFVPIAIRSLLPSGNEQIWGRCALVDTSRTRAETA 120
Query: 6252 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIVTG 6431
VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAI+TG
Sbjct: 121 VIDEFEFKFTKKQPFAAKLLTINAAVDINCKVSVGSIQVLLELHGVDLREERSVAAIITG 180
Query: 6432 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESRKAFKNMFNASSSNLIDLGQEQW 6611
LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEES+KAF+NMFNASSSNLIDLGQEQW
Sbjct: 181 LTCTPTNKMVLLHKIECDTPKWSLCNIIEQVEDEEESKKAFENMFNASSSNLIDLGQEQW 240
Query: 6612 LDEGKRTPLIGNLAIKGFGRRVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 6791
LDEGKR P+IGNLAIKGFGR+VMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG
Sbjct: 241 LDEGKRVPIIGNLAIKGFGRKVMPVRRRNLTTKNLMKDYVSHVKSETASLKRSQSGRDWG 300
Query: 6792 SDRLKKYLEEQALEQARSSTDQHIIRAPKFKTIEVTGLKTVHDLKDKIDKAESSTASDTG 6971
+DRL+KYLEEQA EQAR S DQ R PKFKTIEVTGL+TVHDLK KIDKAESS ASDTG
Sbjct: 301 NDRLRKYLEEQASEQARHSVDQQATRIPKFKTIEVTGLETVHDLKSKIDKAESSAASDTG 360
Query: 6972 TK 6977
TK
Sbjct: 361 TK 362