BLASTX nr result
ID: Rehmannia28_contig00000257
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00000257
(395 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN48563.1| chloroplast PSI type III chlorophyll a/b-binding ... 114 1e-30
ref|NP_001031217.1| PSI type III chlorophyll a/b-binding protein... 115 7e-30
gb|AAR85970.1| type III chlorophyll a/b-binding protein [Nicotia... 110 2e-29
gb|AAS56914.1| CAB-like protein [Ipomoea nil] 110 2e-29
gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Ara... 115 2e-29
ref|NP_176347.1| PSI type III chlorophyll a/b-binding protein [A... 115 2e-29
ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arab... 115 2e-29
gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, put... 115 2e-29
gb|KNA12667.1| hypothetical protein SOVF_123890 [Spinacia oleracea] 115 3e-29
emb|CDY26347.1| BnaA03g60230D [Brassica napus] 114 5e-29
ref|XP_010692543.1| PREDICTED: chlorophyll a-b binding protein 8... 115 5e-29
ref|XP_010473361.1| PREDICTED: chlorophyll a-b binding protein 8... 115 5e-29
ref|XP_010418122.1| PREDICTED: chlorophyll a-b binding protein 8... 115 5e-29
ref|XP_006302674.1| hypothetical protein CARUB_v10020781mg [Caps... 115 5e-29
ref|XP_006431740.1| hypothetical protein CICLE_v10002129mg [Citr... 112 6e-29
ref|XP_013636657.1| PREDICTED: chlorophyll a-b binding protein 8... 114 6e-29
ref|XP_009113128.1| PREDICTED: chlorophyll a-b binding protein 8... 114 6e-29
ref|XP_013717384.1| PREDICTED: chlorophyll a-b binding protein 8... 114 6e-29
emb|CDY15020.1| BnaCnng04230D [Brassica napus] 114 6e-29
ref|XP_013613045.1| PREDICTED: chlorophyll a-b binding protein 8... 114 6e-29
>gb|ABN48563.1| chloroplast PSI type III chlorophyll a/b-binding protein [Brassica
juncea]
Length = 110
Score = 114 bits (286), Expect = 1e-30
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 54 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 110
>ref|NP_001031217.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332195726|gb|AEE33847.1| PSI type III chlorophyll
a/b-binding protein [Arabidopsis thaliana]
Length = 218
Score = 115 bits (289), Expect = 7e-30
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 162 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 218
>gb|AAR85970.1| type III chlorophyll a/b-binding protein [Nicotiana tabacum]
Length = 85
Score = 110 bits (276), Expect = 2e-29
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+K+LKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN+LT+ KFH
Sbjct: 29 SMKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTNFKFH 85
>gb|AAS56914.1| CAB-like protein [Ipomoea nil]
Length = 96
Score = 110 bits (276), Expect = 2e-29
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLK+LKLKEVKNGRLAMLAILGYFIQ LVTGVGPYQNLLDHLADPVNNN+LT+LKFH
Sbjct: 40 SLKDLKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTNLKFH 96
>gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 115 bits (289), Expect = 2e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|NP_176347.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|334183551|ref|NP_001185280.1| PSI type III
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|75266695|sp|Q9SY97.1|LHCA3_ARATH RecName:
Full=Photosystem I chlorophyll a/b-binding protein 3-1,
chloroplastic; Short=Lhca3*1; AltName: Full=LHCI type
III LHCA3; Flags: Precursor
gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16649019|gb|AAL24361.1| PSI type III chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|20260044|gb|AAM13369.1| PSI type III chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|332195725|gb|AEE33846.1| PSI type III chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|332195727|gb|AEE33848.1| PSI type III chlorophyll
a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 115 bits (289), Expect = 2e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata] gi|297333925|gb|EFH64343.1| hypothetical protein
ARALYDRAFT_475174 [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 115 bits (289), Expect = 2e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
Length = 273
Score = 115 bits (289), Expect = 2e-29
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gb|KNA12667.1| hypothetical protein SOVF_123890 [Spinacia oleracea]
Length = 274
Score = 115 bits (288), Expect = 3e-29
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 218 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 274
>emb|CDY26347.1| BnaA03g60230D [Brassica napus]
Length = 255
Score = 114 bits (286), Expect = 5e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 199 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 255
>ref|XP_010692543.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Beta
vulgaris subsp. vulgaris] gi|870847361|gb|KMS99733.1|
hypothetical protein BVRB_1g021010 [Beta vulgaris subsp.
vulgaris]
Length = 273
Score = 115 bits (287), Expect = 5e-29
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|XP_010473361.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Camelina sativa]
Length = 273
Score = 115 bits (287), Expect = 5e-29
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|XP_010418122.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic
[Camelina sativa] gi|727508086|ref|XP_010430161.1|
PREDICTED: chlorophyll a-b binding protein 8,
chloroplastic [Camelina sativa]
Length = 273
Score = 115 bits (287), Expect = 5e-29
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|XP_006302674.1| hypothetical protein CARUB_v10020781mg [Capsella rubella]
gi|482571384|gb|EOA35572.1| hypothetical protein
CARUB_v10020781mg [Capsella rubella]
Length = 273
Score = 115 bits (287), Expect = 5e-29
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 217 SMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>ref|XP_006431740.1| hypothetical protein CICLE_v10002129mg [Citrus clementina]
gi|557533862|gb|ESR44980.1| hypothetical protein
CICLE_v10002129mg [Citrus clementina]
gi|641824204|gb|KDO43554.1| hypothetical protein
CISIN_1g023899mg [Citrus sinensis]
Length = 166
Score = 112 bits (279), Expect = 6e-29
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+K+ KLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 110 SMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 166
>ref|XP_013636657.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic
[Brassica oleracea var. oleracea]
Length = 271
Score = 114 bits (286), Expect = 6e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 215 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271
>ref|XP_009113128.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Brassica rapa]
Length = 271
Score = 114 bits (286), Expect = 6e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 215 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271
>ref|XP_013717384.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Brassica napus] gi|674920308|emb|CDY12903.1|
BnaA09g13710D [Brassica napus]
Length = 271
Score = 114 bits (286), Expect = 6e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 215 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271
>emb|CDY15020.1| BnaCnng04230D [Brassica napus]
Length = 271
Score = 114 bits (286), Expect = 6e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 215 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271
>ref|XP_013613045.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Brassica oleracea var. oleracea]
gi|923800494|ref|XP_013687228.1| PREDICTED: chlorophyll
a-b binding protein 8, chloroplastic-like [Brassica
napus] gi|923913952|ref|XP_013726594.1| PREDICTED:
chlorophyll a-b binding protein 8, chloroplastic-like
[Brassica napus] gi|674875477|emb|CDY57375.1|
BnaCnng31870D [Brassica napus]
Length = 271
Score = 114 bits (286), Expect = 6e-29
Identities = 55/57 (96%), Positives = 57/57 (100%)
Frame = -2
Query: 394 SLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 224
S+KELKLKEVKNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 215 SMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271