BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00000224
         (3035 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   313   e-134
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   317   e-134
gb|KYP42321.1| Copia protein [Cajanus cajan]                          317   e-133
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo...   310   e-132
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo...   306   e-132
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   315   e-131
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794...   313   e-131
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   301   e-130
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   305   e-129
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo...   318   e-129
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo...   313   e-129
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo...   309   e-128
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   309   e-128
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo...   308   e-127
gb|AJY78065.1| putative polyprotein [Glycine max]                     312   e-126
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       304   e-126
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo...   303   e-125
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   292   e-124
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   286   e-124
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo...   300   e-124

>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
            from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  313 bits (801), Expect(2) = e-134
 Identities = 165/321 (51%), Positives = 206/321 (64%), Gaps = 5/321 (1%)
 Frame = +3

Query: 1206 LHILLDIQ---EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVY 1376
            LH  L I    EP TY QA    HW EAM  EI ALE+N+TW +TTLPPGK   GCKWV+
Sbjct: 162  LHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQNNTWTMTTLPPGKTPXGCKWVF 221

Query: 1377 KIKTKPDGSVDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQL 1556
            ++K + DGS +RYKARLVAKGY Q+ G+DY+D+FSPVAK+ TVRL +ALAT  +W + QL
Sbjct: 222  RVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFSPVAKITTVRLLLALATSRHWHIQQL 280

Query: 1557 DINNAFLHGYLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFG 1736
            D+NNAFLHG L ED+YM PP G+S     +VC L +S+YGLK ASRQW ++    LIS G
Sbjct: 281  DVNNAFLHGDLNEDVYMLPPPGFSHDST-KVCKLHKSIYGLKQASRQWFSKLTTALISLG 339

Query: 1737 FTQSAHDSCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARY 1916
            + QS  D  +F K  S  F            T +   +I+ VK FLD  F IKDLG  +Y
Sbjct: 340  YIQSTADHSMFTKKHSEDFTVLLIYVDDIILTGTSSPEIMKVKQFLDTTFRIKDLGDLKY 399

Query: 1917 FLGMEITRTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPG--LKLVADSGSPLPDPD 2090
            FLG+E+ RT+ G  + QRKY L+ILQ+   ++CKPA TP       KL +  G  L D  
Sbjct: 400  FLGLEVARTSQGIHISQRKYALEILQESGFIECKPAKTPMATKSVYKLTSTDGELLSDIT 459

Query: 2091 RFRRLVG*LLYLNLTRPTLHF 2153
             +R+LVG LLYL  TR  L F
Sbjct: 460  SYRQLVGKLLYLTSTRLDLTF 480



 Score =  197 bits (500), Expect(2) = e-134
 Identities = 96/203 (47%), Positives = 124/203 (61%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            +TF VQ LSQF++ P T+H +AA  +LRYLKGCPS GLFYPA     L+AFSD DWAGCP
Sbjct: 478  LTFAVQQLSQFMDKPTTNHLQAAHRVLRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCP 537

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            ++R SITGYCIF G  LI                        TVCE++W+ ++  DL + 
Sbjct: 538  ETRRSITGYCIFFGEALISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVP 597

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            I    P+FCDN++ + I +N   HERTKHIEIDCHI +++ +   +      SS QL D+
Sbjct: 598  ISHATPVFCDNKSTIQIASNPTFHERTKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADL 657

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            FTKA         ISKLGML++H
Sbjct: 658  FTKALAAQPFQDMISKLGMLNIH 680


>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  317 bits (811), Expect(2) = e-134
 Identities = 157/310 (50%), Positives = 206/310 (66%)
 Frame = +3

Query: 1224 IQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGS 1403
            + EP  +A+A  +  W++AM++EI ALE N+TW LTTLPP K +IGC+WVYK+K K DGS
Sbjct: 800  VTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGS 859

Query: 1404 VDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHG 1583
            +DRYKARLVAKGY Q+ G+D++D+FSPVAKL TVRL ++LA ++NW L QLD+NNAFLHG
Sbjct: 860  IDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHG 919

Query: 1584 YLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSC 1763
             L E++YM  P G + + PGQVC L+RSLYGLK ASRQW     + LI  G+  S  D  
Sbjct: 920  DLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHS 979

Query: 1764 LFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRT 1943
            LF+K   ++               +   +I  +   L   F IKDLG  +YFLG+E+ R 
Sbjct: 980  LFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARN 1039

Query: 1944 NLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLY 2123
            + G  LCQRKYILD+L D  +L  KP +TP    + L A SG+PL D   +RRLVG L+Y
Sbjct: 1040 HTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGRLIY 1099

Query: 2124 LNLTRPTLHF 2153
            L  TRP + +
Sbjct: 1100 LTNTRPDITY 1109



 Score =  191 bits (486), Expect(2) = e-134
 Identities = 96/203 (47%), Positives = 122/203 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            IT+ VQ LSQFV+NP T+H +A   +LRYLKG P  G+F      V LRAFSD DWAGCP
Sbjct: 1107 ITYAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCP 1166

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R SITG+ ++LG  LI                        T CEL+W+S++  D  + 
Sbjct: 1167 DTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHID 1226

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
              +P  L+CDNQ+AL I +N V HERTKHIEIDCHI +D+   G +    V SS QL DI
Sbjct: 1227 PISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLADI 1286

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
             TK   P +  +  SKLGML++H
Sbjct: 1287 LTKPLSPFVFRSHCSKLGMLNIH 1309



 Score = 85.5 bits (210), Expect(2) = 2e-17
 Identities = 41/101 (40%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = +1

Query: 439 LQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKEMNTK 615
           LQ + +S+ QG+ SV  YFTKL+ LWDE  N  P P C C + C C VL  ++++++  +
Sbjct: 46  LQLEASSLKQGDLSVTEYFTKLRILWDELENFRPDPNCTCTIKCACSVLTIIAQRKLEDQ 105

Query: 616 LIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
            +QFL GLN+ +  V+S +LLM+  P I+K +S +++ ++Q
Sbjct: 106 AMQFLRGLNDQYNNVKSHVLLME--PPISKIFSYVVQQERQ 144



 Score = 34.3 bits (77), Expect(2) = 2e-17
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 311 MVTSWLLNSISRDIVDGFIYAETAKELWDDLAQRF 415
           MV SWL++S+S  I    ++ + A ++W DL  R+
Sbjct: 1   MVVSWLVHSVSPSIRQSILWMDQADDIWKDLKTRY 35


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  317 bits (812), Expect(2) = e-133
 Identities = 159/308 (51%), Positives = 200/308 (64%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP ++ +A +   W  AM  E+ ALEKN TW L  LP GK+ +GCKWVY++K K DGSV+
Sbjct: 946  EPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVE 1005

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKG+ Q  G+DY+++FSPV KL TVR  ++LA  HNW LHQLD++NAFLHG L
Sbjct: 1006 RYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLHGDL 1065

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
             E++YM PP G+  + P  VC L +SLYGLK ASRQWN +    LIS  F QS+ D  LF
Sbjct: 1066 FEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQSSTDHSLF 1125

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
            +K   SS             T +   +I AVK +L   F IKDLG  ++FLG+EI R+  
Sbjct: 1126 IKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLGPLKFFLGLEIARSQS 1185

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G  L QRKY L++L +  L DCKP +TP    +KL A  G PL DP  FRRL+G LLYL 
Sbjct: 1186 GLILNQRKYCLELLSEHGLTDCKPVSTPIDASVKLYASEGLPLDDPTIFRRLIGRLLYLT 1245

Query: 2130 LTRPTLHF 2153
             TRP + F
Sbjct: 1246 NTRPDISF 1253



 Score =  191 bits (484), Expect(2) = e-133
 Identities = 91/204 (44%), Positives = 129/204 (63%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I+F VQ LSQFV++P  +H++AA  +LRYLK  P+LGLFYP+  +  ++AFSD DWA CP
Sbjct: 1251 ISFAVQQLSQFVDSPRATHFQAALRILRYLKSSPALGLFYPSQTEHRIQAFSDSDWASCP 1310

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            ++R S+TG+CIF G  LI                          CEL+W+ F+  DL ++
Sbjct: 1311 NTRRSVTGFCIFYGSALISWKSKKQSTVSRSSSEAEYRALASVTCELQWLLFLCHDLSIN 1370

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            IPTP  +FCD+Q+A++I  N   HERTKHIE+DCH+T+ + + G I    VPS  QL D+
Sbjct: 1371 IPTPFSIFCDSQSAIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIHLFHVPSKSQLADV 1430

Query: 2684 FTKASGPGLLHAFISKLGMLDLHH 2755
            FTKA  P      +SKL ++D+++
Sbjct: 1431 FTKALYPRNFTEAVSKLCLIDIYN 1454



 Score = 83.6 bits (205), Expect(3) = 5e-32
 Identities = 38/105 (36%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHC-GVCTCGVLKQLSEKE 603
           ++  LQ  +    QG+S+V  Y+T LK LW +        +C C   C+CG+L ++ ++ 
Sbjct: 78  RISDLQASVHECKQGDSTVSQYYTHLKTLWKQLEQYRSVLICSCDNPCSCGILLKIKKER 137

Query: 604 MNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
            +  +I+FL GLNE + QVRS IL+MDP+P I K +S++ + +++
Sbjct: 138 EDDCVIKFLRGLNEEYSQVRSNILMMDPMPSITKTFSLIQQHERE 182



 Score = 59.3 bits (142), Expect(3) = 5e-32
 Identities = 27/71 (38%), Positives = 40/71 (56%)
 Frame = +2

Query: 203 MLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAETA 382
           ML AL +K K  FI+G +  P    P    W++ +  V SWL+ S++  I    +Y +TA
Sbjct: 1   MLTALESKNKEQFIDGSLPSPPTSDPLRSTWRRCNKTVMSWLIRSMTPSIAQSVLYMDTA 60

Query: 383 KELWDDLAQRF 415
            E+W DL +RF
Sbjct: 61  AEIWKDLCERF 71



 Score = 46.6 bits (109), Expect(3) = 5e-32
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
 Frame = +2

Query: 728  LRSKELDGAAMVAHTITSGRGRGLTYRSGNATGNPVGNWQSGRGRGVYRRTREEKAKLTC 907
            L S   D  +  A  +T    +  ++  G ++ N  G   + RG G + R      +  C
Sbjct: 188  LLSPSTDSTSFAA--LTDASMKPSSFERGGSSNNRGGGSSNNRGGGRFGRGNGRGNRF-C 244

Query: 908  SHCQGTRHEMHECFKLIGYPEWYKK--PPGERGRPYANLADISNAPKIKNSTPMISAHSP 1081
            + C+ T H +  CF++ GYP  Y+         + +ANL  + +    +++TP  S++  
Sbjct: 245  AKCKKTNHTIDSCFEIYGYPAGYRNRDKSNSTSKAFANLTTVDSDTASRSATPEESSNQT 304

Query: 1082 GGSMNSTQ 1105
              +++  Q
Sbjct: 305  QFTLSKEQ 312


>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 515

 Score =  310 bits (795), Expect(2) = e-132
 Identities = 153/308 (49%), Positives = 201/308 (65%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP  + +A  +  W++AM++EI+ALE N+TW LTTLPP K +IGC+WVYK K K DGS+D
Sbjct: 1    EPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSID 60

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKGY Q+ G+D++D+FSPVAKL  VRL ++L  +HNW L QLD+NN+FLHG L
Sbjct: 61   RYKARLVAKGYTQMEGLDFFDTFSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDL 120

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
             E++YM  P G + + PGQVC L+RSLYGLK ASRQW     + LI  G+  S  D  LF
Sbjct: 121  NEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLF 180

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
            +K   ++               +   +I  +   L + F IKDLG  +YFLG+E+ R + 
Sbjct: 181  LKCSPATITAILIYVDDLVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHT 240

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G  LCQRKY LD+L D  +L  KP +TP      L A SG+PL D   +RRLVG L+YL 
Sbjct: 241  GIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGRLIYLT 300

Query: 2130 LTRPTLHF 2153
             TRP + +
Sbjct: 301  NTRPDITY 308



 Score =  192 bits (488), Expect(2) = e-132
 Identities = 96/203 (47%), Positives = 121/203 (59%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            IT+ VQ LSQFV NP T+H +A   +LRYLKG P  G+F      V LRAFSD DWAGCP
Sbjct: 306  ITYAVQQLSQFVTNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCP 365

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R SITG+ ++LG  LI                        T CEL+W+S++  D  + 
Sbjct: 366  DTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHID 425

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            +  P  L+CDNQ AL I +N + HERTKHIEIDCHI +D+   G +    V SSLQL DI
Sbjct: 426  LIRPSILYCDNQFALQISSNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADI 485

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
             TK   P +  +  SKLGML++H
Sbjct: 486  LTKPLSPFVFRSHCSKLGMLNIH 508


>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  306 bits (785), Expect(2) = e-132
 Identities = 152/308 (49%), Positives = 200/308 (64%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP ++ +AC + HW +AM  EI ALE+N TW L  LPP K+ +GCKWVYK K   DGS++
Sbjct: 884  EPTSFKEACKHDHWQQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIE 943

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            R+KARLVAKG+ Q  G+D++++FSPV KL TVR  +++A  HNW LHQLD++NAFLHG L
Sbjct: 944  RHKARLVAKGFTQTEGMDFFETFSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDL 1003

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
            + ++YM PP G     P  VC L +SLYGL+ ASRQ N++  + LIS+GF+QS  D  LF
Sbjct: 1004 DVEVYMKPPPGLILPEPHLVCKLHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLF 1063

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
            ++  S+SF            T    +DI+AVK FL   F IKDLG  + FLG ++ R+  
Sbjct: 1064 IRHSSTSFTALLVYVDDIVLTGDSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQ 1123

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G  L QRKY LDIL +     CKPA +P  P +KL  D G  + DP  +RRL+G L YL 
Sbjct: 1124 GLILNQRKYCLDILAEFGFTGCKPANSPSNPTVKLKDDEGDLVQDPTAYRRLIGKLQYLT 1183

Query: 2130 LTRPTLHF 2153
             TRP + F
Sbjct: 1184 NTRPDISF 1191



 Score =  195 bits (495), Expect(2) = e-132
 Identities = 93/204 (45%), Positives = 123/204 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I+F VQ +SQF++ P  SH  AA  +L+YLKGCP LGLFYP+     ++AFSD DWA C 
Sbjct: 1189 ISFAVQQVSQFMSKPRYSHLNAAFRILKYLKGCPGLGLFYPSANPHRIQAFSDSDWATCC 1248

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             +R S TGYC+F G CLI                          CEL+W+ +V+ DL L 
Sbjct: 1249 ITRKSTTGYCVFYGNCLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYVADDLCLQ 1308

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            IP P P FCDNQ+A+ +  N   HERTKHIE+DCH+ + +   G I    VPS  QL D+
Sbjct: 1309 IPLPFPTFCDNQSAIQLAKNPSFHERTKHIEVDCHLIRAKILDGLIVLSHVPSKHQLADM 1368

Query: 2684 FTKASGPGLLHAFISKLGMLDLHH 2755
            FTK+  PG  +  +SK+G+L++HH
Sbjct: 1369 FTKSLYPGPFNVNLSKMGLLNIHH 1392



 Score = 85.5 bits (210), Expect(2) = 2e-24
 Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKE 603
           ++  LQ +I +  QG+ SV  Y+TKLK LW E         C C   C CG+L +L ++ 
Sbjct: 78  RICDLQDQILACRQGDFSVSEYYTKLKILWKELELYRCVLTCTCLTPCKCGLLSKLHKER 137

Query: 604 MNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
            +  +I+FL GLNES+ QVRSQI+++DP+P I K +SM+L+ +++
Sbjct: 138 EDDYVIRFLRGLNESYAQVRSQIMMLDPMPSIVKTFSMVLQHERE 182



 Score = 57.8 bits (138), Expect(2) = 2e-24
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +2

Query: 203 MLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAETA 382
           M+++L  K K  FI+G +  P +  P  E W++ + MV SWL  S++  I    ++ +TA
Sbjct: 1   MVVSLETKNKEKFIDGTLSCPPITDPLHEAWRRSNRMVMSWLTRSMTPSIKQSVMWMDTA 60

Query: 383 KELWDDLAQRF 415
            E+W DL  RF
Sbjct: 61  LEIWRDLKDRF 71


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  315 bits (807), Expect(2) = e-131
 Identities = 161/320 (50%), Positives = 203/320 (63%)
 Frame = +3

Query: 1194 IMLTLHILLDIQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWV 1373
            + +T H+     EPHT+ QA  N  W+EAM  E+ ALE N TW +  LPPGK  IG KWV
Sbjct: 895  LSITTHV-----EPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWV 949

Query: 1374 YKIKTKPDGSVDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQ 1553
            YKIK K DGS++RYKARLV KGY Q+ G+DY+D+F+PVAKL TVR+ +A+A+  +W LHQ
Sbjct: 950  YKIKYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHWELHQ 1009

Query: 1554 LDINNAFLHGYLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISF 1733
            LDINNAFLHG L ED+YM+ P G +   P  VC L +SLYGLK ASRQW  +  + L+S 
Sbjct: 1010 LDINNAFLHGDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQASRQWFAKLSSFLLSL 1069

Query: 1734 GFTQSAHDSCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVAR 1913
             + QS HD  LF K   + F              +   +I  +K  LD  F IKDLG  R
Sbjct: 1070 HYKQSQHDHSLFTKHHGTHFTVILIYVDDLIIAGTDSEEINHIKQSLDVKFKIKDLGPLR 1129

Query: 1914 YFLGMEITRTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDR 2093
            YFLG+EI R++LG SL QRKY LD+L +   L  KP  TP   G +L   + SP  DP  
Sbjct: 1130 YFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPVLTPIIKGTRLSHTTDSPYEDPAG 1189

Query: 2094 FRRLVG*LLYLNLTRPTLHF 2153
            +RRL+G LLYL  TRP + +
Sbjct: 1190 YRRLIGKLLYLITTRPDISY 1209



 Score =  186 bits (472), Expect(2) = e-131
 Identities = 90/203 (44%), Positives = 124/203 (61%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I++ VQ LSQF++ P  SH++AA  +LRYLKG P  GLFYPA   + L+AFSD DWA CP
Sbjct: 1207 ISYSVQQLSQFLSCPQQSHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCP 1266

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R S++GY IFLG  LI                        T CE++W++++  D  + 
Sbjct: 1267 DTRRSLSGYSIFLGNSLISWKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVP 1326

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
              TP  L+CDNQ+A HI +N V HERTKHIEIDCH+ +++ +AG      + SS QL DI
Sbjct: 1327 FTTPALLYCDNQSARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADI 1386

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
             TK   P      +SKLG+++++
Sbjct: 1387 LTKPLDPSPFQYLLSKLGVINIY 1409



 Score = 90.9 bits (224), Expect(3) = 1e-28
 Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = +1

Query: 439 LQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKEMNTK 615
           L ++I SI Q + ++  YFT+LK LW+E  +L PTP C C V C+C +  ++ + +    
Sbjct: 82  LLQEIHSIKQADRTISSYFTELKILWEELESLRPTPTCTCDVRCSCDLSTKVKDYKDTEY 141

Query: 616 LIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQR 741
           +I FL GLN+ +  V+SQIL+MDPLP INK +S++L+ ++Q+
Sbjct: 142 VICFLKGLNDQYNTVKSQILIMDPLPVINKVFSLVLQQERQQ 183



 Score = 59.3 bits (142), Expect(3) = 1e-28
 Identities = 25/71 (35%), Positives = 41/71 (57%)
 Frame = +2

Query: 203 MLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAETA 382
           M+ AL +K K  F++G I+ P+  +   + W + + M+ SW+  S+S  I    IY   A
Sbjct: 1   MMRALLSKNKFKFVDGSIQEPQKSNELHDAWVRCNTMILSWITKSVSEQIAQSVIYINNA 60

Query: 383 KELWDDLAQRF 415
           + LW+DL +RF
Sbjct: 61  QRLWEDLKERF 71



 Score = 27.7 bits (60), Expect(3) = 1e-28
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 800 TYRSGNATGNPVGNWQSGRGRG-VYRRTREEKAKLTCSHCQGTRHEMHECFKLIGYPEWY 976
           T   GN   +  G   S RGRG    R     A   C+ C    H +  C+   G+P  +
Sbjct: 198 TQSGGNWRSSSNGRGGSSRGRGRTGGRGSFTNAGKVCTFCGKENHTIDSCYFKHGFPPNF 257

Query: 977 K 979
           K
Sbjct: 258 K 258


>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
          Length = 1150

 Score =  313 bits (803), Expect(2) = e-131
 Identities = 161/310 (51%), Positives = 200/310 (64%), Gaps = 2/310 (0%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP +Y +AC +  W++AM+ EI+ALE+N+TW LT LP  K  IGCKWVYKIK   DGS++
Sbjct: 320  EPKSYNEACKHDSWVQAMHDEISALERNNTWVLTDLPQHKNVIGCKWVYKIKHNSDGSIE 379

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKGY Q+ G+DY D+FSPVAK+ TVRL +ALA L+NW L QLD+NNAFLHG L
Sbjct: 380  RYKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLLLALAALNNWYLRQLDVNNAFLHGGL 439

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
             E++YM  P G   A PGQVC L+RSLYGLK ASRQW       L   GF QS  D  LF
Sbjct: 440  HEEVYMVLPPGMKSAKPGQVCKLQRSLYGLKQASRQWYARLSTFLAHHGFKQSVADYSLF 499

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
                ++SF            + +    I ++   LDD F IKDLG  +YFLG E+ R   
Sbjct: 500  TLKKANSFTALLVYVDDIVLSGNDLSVISSITKLLDDTFKIKDLGNLKYFLGFEVARGTS 559

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDP--DRFRRLVG*LLY 2123
            G ++CQRKY LD+L D  +L CKP +TPF    +L   SGS L D     +R L+G L+Y
Sbjct: 560  GINICQRKYALDLLTDTDMLHCKPVSTPFDYYTRLHQASGSMLSDSQISSYRCLIGRLIY 619

Query: 2124 LNLTRPTLHF 2153
            L  TRP + F
Sbjct: 620  LTNTRPDITF 629



 Score =  184 bits (468), Expect(2) = e-131
 Identities = 89/203 (43%), Positives = 122/203 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            ITF VQ LSQF+ +P T+H+ A   +LRY+K  P LGLF+P+  ++ L+AFSD DWAGC 
Sbjct: 627  ITFAVQHLSQFIASPTTAHYTALYRILRYIKAAPGLGLFFPSTSELQLKAFSDSDWAGCV 686

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R SITG+ ++LG  LI                          CE++W++++  D  ++
Sbjct: 687  DTRKSITGFSVYLGSSLISWKSKKQAIVSRSSFEAGYRALTSVTCEIQWLTYLLHDFDIT 746

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               P  +FCDN++ LHI  N V HERTKHIEIDCHI +D+  +G I    + S  QL D+
Sbjct: 747  Y-KPALVFCDNKSGLHIAVNPVFHERTKHIEIDCHIVRDKLLSGLIKLLPIASQQQLADV 805

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            +TKA  PG      SKLGM D+H
Sbjct: 806  YTKALAPGAFRFICSKLGMNDIH 828


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  301 bits (771), Expect(2) = e-130
 Identities = 158/309 (51%), Positives = 197/309 (63%), Gaps = 1/309 (0%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP TY QA  +P W EAM  E+ ALE+NHTW LT LP G + IGCKWVYKIK   DG+V+
Sbjct: 950  EPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVE 1009

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKG+ Q  GIDY ++FSPVAKL TVR  +A+A + +W+LHQ+D+ NAFLHG L
Sbjct: 1010 RYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDL 1069

Query: 1590 EEDIYMDPPSGYSKAG-PGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCL 1766
             E++YM  P G+ + G    VC L +SLYGLK ASR W  +F A +   GF QS  D  L
Sbjct: 1070 LEEVYMQLPLGFRQQGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSL 1129

Query: 1767 FVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTN 1946
            F K   +SF            T + E  I A+K  L   F IKDLG  RYFLG+E+ R+ 
Sbjct: 1130 FTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARST 1189

Query: 1947 LGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYL 2126
             G S+ QRKY LDIL +  LL  KP +TP     KL+   G  L +P  +RRLVG L+YL
Sbjct: 1190 DGISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYL 1249

Query: 2127 NLTRPTLHF 2153
             +TRP + +
Sbjct: 1250 TITRPEISY 1258



 Score =  194 bits (493), Expect(2) = e-130
 Identities = 96/207 (46%), Positives = 125/207 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I++ V +LSQF+  P   H  A  HLLRYLKG P  GL++PA G++ LR F D DWA C 
Sbjct: 1256 ISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCS 1315

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             +R S+TGYCIFL G  I                          CEL W+ ++  DL++ 
Sbjct: 1316 ITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKVE 1375

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               P  LFCD++AALHI AN V HERTKHIEIDCH+ +++ ++G I    VPSS QL D+
Sbjct: 1376 HSQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADL 1435

Query: 2684 FTKASGPGLLHAFISKLGMLDLHHAPT 2764
            FTK     + H+ +SK G+LD+ HAPT
Sbjct: 1436 FTKPLNSSIFHSLLSKFGVLDI-HAPT 1461



 Score =  103 bits (258), Expect(2) = 2e-23
 Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
 Frame = +1

Query: 25  IVEDGVIDDAACDGNIRRGQIIPPLTNPVASVDD-EPLLLHGSDHPGLILVTNSLNGNKI 201
           +V D ++  AA D N + G     LT+  A+ +  +P  LH SDHPG++LV+  + G+  
Sbjct: 47  VVADELLVAAAMDAN-KTG-----LTSSKATTEALDPFSLHHSDHPGMVLVSKVIEGDNY 100

Query: 202 DAYCFRS*D*ARIYKRKNRSARGRFPKF*TMEEG*LYGYQLVVEFDFSRYC*WIYLC*DS 381
             +            R + SA+ +         G + G           +  W   C D 
Sbjct: 101 STWSRAM--------RISLSAKDKI--------GFVTGSIKPPSSTDDSFPSW-QRCNDM 143

Query: 382 *GAVG*FSPTIW---SGPQLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVC 552
               G     ++   +  ++YQ++R I    QG  S+ VY+TKLK  WDE ++      C
Sbjct: 144 HQKSGQICENVFRQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSSYHEVLSC 203

Query: 553 HCGVCTCGVLKQLSEKEMNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIK 732
                +CG L++L E++   +++QFL+GLN+S+  +R QILLM PLPD  + YS++L+ +
Sbjct: 204 -----SCGGLEKLKERDEKERVMQFLMGLNDSYAAIRGQILLMHPLPDTRRVYSLVLQQE 258

Query: 733 KQRVRWSSNGGSHYYFRQRQRFN 801
           KQ     +NG  ++Y     R N
Sbjct: 259 KQVEVSLNNGNKNHYAMLADRDN 281



 Score = 36.2 bits (82), Expect(2) = 2e-23
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
 Frame = +2

Query: 875  RTREEKAKLTCSHCQGTRHEMHECFKLIGYPEWYK------KPPGERGRPYANLADISNA 1036
            + +++K  L CS+C    H + +C+ L G+P  +K      KPP +R          SNA
Sbjct: 288  QVQKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHKLHGKNVKPPNQRH---------SNA 338

Query: 1037 PKIKNSTPMISAHSPGGSMNSTQSKGATIDMSGMIQQEIAKFMAKMGAGDVENNANFAHF 1216
              +K  T          ++ +      T D   +  +E  + MA +   +  N+ +FA+ 
Sbjct: 339  NNVKVET--------NKAVETEAKLLPTNDGPRLTTEEYNQLMAMIRKNNGGNSQHFANA 390

Query: 1217 AG 1222
             G
Sbjct: 391  TG 392


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  305 bits (782), Expect(2) = e-129
 Identities = 156/319 (48%), Positives = 203/319 (63%)
 Frame = +3

Query: 1206 LHILLDIQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIK 1385
            L +L    EP ++ QA  +P W +AM+ E+ ALE+N+TW++  LPPG K IGC+WVYKIK
Sbjct: 1211 LALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIK 1270

Query: 1386 TKPDGSVDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDIN 1565
               DG+++RYKARLVAKGY QV GIDY ++FSP AKL T+R  + +A   NW +HQLD++
Sbjct: 1271 YHSDGTIERYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVH 1330

Query: 1566 NAFLHGYLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQ 1745
            NAFLHG L+E++YM PP G  + G   VC L++S+YGLK ASR W + F A + S G+ Q
Sbjct: 1331 NAFLHGNLQEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQ 1390

Query: 1746 SAHDSCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLG 1925
            S  D  LF KS  + F            T +   +I  +K  L   F IKDLG  +YFLG
Sbjct: 1391 SKADYSLFTKSQGNKFTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLG 1450

Query: 1926 MEITRTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRL 2105
            +E +R+  G  + QRKY LDILQD  L   KP   P    LKL  + G  L DP R+RRL
Sbjct: 1451 IEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRL 1510

Query: 2106 VG*LLYLNLTRPTLHFVYS 2162
            VG L+YL +TRP +  VYS
Sbjct: 1511 VGRLIYLTVTRPDI--VYS 1527



 Score =  188 bits (477), Expect(2) = e-129
 Identities = 92/198 (46%), Positives = 119/198 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I + V+ LSQF+N P   HWEAA  +LRY+KG P  GLF P+  +++L AF D DW GC 
Sbjct: 1524 IVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCR 1583

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             SR S++GYC+FLG  LI                        T  EL W+ ++  DL++ 
Sbjct: 1584 MSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILKDLKVE 1643

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            +  P PLFCDNQAAL+I AN V HERTKHIEIDCHI +++ +AG I P  V + +QL D+
Sbjct: 1644 LDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLADV 1703

Query: 2684 FTKASGPGLLHAFISKLG 2737
            FTKA G        +KLG
Sbjct: 1704 FTKALGREQFEFLCTKLG 1721



 Score = 89.4 bits (220), Expect(3) = 4e-31
 Identities = 44/108 (40%), Positives = 72/108 (66%)
 Frame = +1

Query: 418 SGPQLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGVCTCGVLKQLSE 597
           + P ++Q+Q+ IA+++QG  +V  YFTK+K LWDE      +P+      TC   +   E
Sbjct: 408 NAPAVFQIQKSIATMSQGTMTVAAYFTKIKALWDELETYR-SPL------TCNQRQAHLE 460

Query: 598 KEMNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQR 741
           +    +L+QFL+GLNES++ VRS IL+M PLP++ +AYS++++ + QR
Sbjct: 461 QREEDRLMQFLMGLNESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQR 508



 Score = 68.9 bits (167), Expect(3) = 4e-31
 Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +2

Query: 197 RSMLIALGAKTKLGFINGKIEVP-EVDSP-NFEQWKKVDCMVTSWLLNSISRDIVDGFIY 370
           ++++ AL  K K+GF++G +E P + D P  FEQW + + M+ SWL +++  DI +G I+
Sbjct: 330 KAVIHALTTKKKIGFVDGTVEEPSQEDEPFMFEQWNQCNSMILSWLTHAVESDIAEGIIH 389

Query: 371 AETAKELWDDLAQRF 415
           A+TA+E+W DL  +F
Sbjct: 390 AKTAREVWVDLRDQF 404



 Score = 28.1 bits (61), Expect(3) = 4e-31
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 130 PLLLHGSDHPGLILVTNSLNG 192
           PL +H SD PG +LV   LNG
Sbjct: 302 PLYIHHSDQPGHVLVPIKLNG 322


>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1445

 Score =  318 bits (815), Expect(2) = e-129
 Identities = 161/308 (52%), Positives = 203/308 (65%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP  YAQA T   W +AM  E+ AL +N TW L +LPPG+K IGCKWVY+IK K DGSVD
Sbjct: 935  EPSNYAQAITQDCWKQAMMTELDALNRNRTWSLVSLPPGRKLIGCKWVYRIKYKADGSVD 994

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            R+KARLVAKG+ Q  GIDY+++FSPVAKL TVR  +ALA+ +NW LHQLD++NAFLHG L
Sbjct: 995  RHKARLVAKGFTQTEGIDYFETFSPVAKLTTVRFLLALASTNNWFLHQLDVDNAFLHGDL 1054

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
            EE++YM PP G        VC L++SLYGLK ASR WN +  ++L+  G+ QS+ D  LF
Sbjct: 1055 EEEVYMRPPQGLQLPDSKLVCKLEKSLYGLKQASRNWNQKLNSELLHLGYKQSSADHSLF 1114

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
            +K   SS             + +   +I  VK  L   F IKDLG  ++FLG+E+ R+  
Sbjct: 1115 IKKQGSSITILLVYVDDVVLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKK 1174

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G  L QRKY L+++ +  LL  KPA TP  P +KL AD GS L DP  FRRL+G LLYL 
Sbjct: 1175 GIILNQRKYCLELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLT 1234

Query: 2130 LTRPTLHF 2153
             TRP + F
Sbjct: 1235 NTRPDISF 1242



 Score =  175 bits (444), Expect(2) = e-129
 Identities = 88/203 (43%), Positives = 119/203 (58%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I+F VQ LSQFV+ P   H +AA  ++RYLKG P LGLFYPA   + ++AFSD DWA C 
Sbjct: 1240 ISFSVQQLSQFVSQPREPHLQAALRIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCS 1299

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             +R S+TGYC+FLG  L+                          CEL+W+ F+S  L + 
Sbjct: 1300 TTRKSVTGYCVFLGKSLVSWKSKKQSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVK 1359

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            IP P  +F D+Q+A+ I  N   HERTKHIE+DCH+ + + +   +    VPS+ QL D 
Sbjct: 1360 IPAPFSVFSDSQSAIQIAKNPTFHERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADA 1419

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            FTK+  P L    ISKLG+ ++H
Sbjct: 1420 FTKSLYPKLFLHAISKLGLSNIH 1442



 Score = 80.9 bits (198), Expect(4) = 7e-31
 Identities = 35/105 (33%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKE 603
           ++  LQ ++ +  QG  +V  Y+T+L+ LW E +       C C V C+CG+  ++ ++ 
Sbjct: 126 RIADLQEELQNCKQGELTVSQYYTRLRILWKELSIYRTVLACSCPVACSCGIFSKIQKER 185

Query: 604 MNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
            +  +I+FL GLN+ F QVRSQ++LM+P+P + + +S++L+ +++
Sbjct: 186 DDDCVIKFLRGLNDEFSQVRSQVMLMEPMPGLTRTFSLVLQQERE 230



 Score = 55.1 bits (131), Expect(4) = 7e-31
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = +2

Query: 203 MLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAETA 382
           ML+AL  K K  F+ G +  P +  P  + W + + MV SWL +S++  I    ++ E+A
Sbjct: 49  MLVALETKNKDQFVLGTLTCPNLSDPLHKAWCRCNKMVMSWLAHSMTPSIRQSVMWIESA 108

Query: 383 KELWDDLAQRF 415
            E+W DL  RF
Sbjct: 109 SEIWRDLCDRF 119



 Score = 42.0 bits (97), Expect(4) = 7e-31
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +2

Query: 746  DGAAMVAHTITSGRGRGLTYRSGNATGNPVGNWQSGRGRGVYRRTREEKAKLTCSHCQGT 925
            + AA+      S R    T R G +  N  G  +SGRG    R TR       C+ C+ T
Sbjct: 241  ESAALATFNDDSARNNSST-RGGFS--NTRGGGRSGRGNNTGRSTR------FCTKCKKT 291

Query: 926  RHEMHECFKLIGYPEWYKKPPGERGRPYANLADISNAPKIKNSTPMISAHSPGGSMNSTQ 1105
             H +  CF++ G+P  Y +  G+     +N +  S+     ++T ++SA S    + S  
Sbjct: 292  NHTIDTCFQIYGFPPGY-RTNGKSTSTTSNTSK-SSVNNFDSTTSLVSATSAKDDVTSQN 349

Query: 1106 ----SKGATIDMSGMIQQ 1147
                SK     + G++QQ
Sbjct: 350  TFNFSKDQYQALLGLLQQ 367



 Score = 27.3 bits (59), Expect(4) = 7e-31
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 97  LTNPVASVDDEPLLLHGSDHPGLILVTNSLNGN 195
           L NP       PL LH  ++P LILVT  L+ N
Sbjct: 13  LVNPA-----NPLFLHPGENPALILVTPLLSDN 40


>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  313 bits (802), Expect(2) = e-129
 Identities = 162/313 (51%), Positives = 202/313 (64%), Gaps = 4/313 (1%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EPHTY QA     WI AM  E+ AL+ N TW +  LP GK+ IGCKWVYKIK   DGS++
Sbjct: 493  EPHTYTQASKYDCWIMAMKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIE 552

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKGY+Q  G+DY D++SPVAKL TVR+ +AL  +  W L QLD+NNAFLHG L
Sbjct: 553  RYKARLVAKGYSQTEGLDYLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDL 612

Query: 1590 EEDIYMDPPSGYSKAGPG----QVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHD 1757
             E++YM  P G S         +VC L +S+YGLK ASRQW ++  + LIS G++ S  D
Sbjct: 613  HEEVYMTLPPGLSVPSSSNTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTAD 672

Query: 1758 SCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEIT 1937
              LF+KS SS F              + + +I  +K  L   F IKDLG  RYFLG+EI 
Sbjct: 673  HSLFIKSSSSHFTALLVYVDDIILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIA 732

Query: 1938 RTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*L 2117
            R+N G  L QRKY L+IL+DV  L  KP++TPF P LKL +D GSP  D   +RRL+G L
Sbjct: 733  RSNKGILLNQRKYTLEILEDVGFLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRL 792

Query: 2118 LYLNLTRPTLHFV 2156
            LYL  TRP + +V
Sbjct: 793  LYLTTTRPDISYV 805



 Score =  179 bits (453), Expect(2) = e-129
 Identities = 87/203 (42%), Positives = 123/203 (60%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I++ VQ LSQFV+ PL  H++AAT +LRYLKG    GLFY +   + L AF+D DWA C 
Sbjct: 802  ISYVVQQLSQFVSKPLDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCS 861

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             SR SITG+C+FLG  LI                          CEL+W+ ++ +DL+ S
Sbjct: 862  ISRKSITGFCVFLGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTS 921

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            +  P  +FCDN++A+++  N   HERTKHIEIDCH+ +++ ++  +    VPSS QL D 
Sbjct: 922  LNFPTSVFCDNKSAIYLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADA 981

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            FTK       ++F+SKLG+ D+H
Sbjct: 982  FTKPLHATSFNSFVSKLGLYDVH 1004


>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  309 bits (792), Expect(2) = e-128
 Identities = 154/310 (49%), Positives = 201/310 (64%)
 Frame = +3

Query: 1224 IQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGS 1403
            I EP +Y  A  +  W EA+  E+ AL+K  TW LT LPP K+++GC+WV+K+K   DGS
Sbjct: 903  IIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGS 962

Query: 1404 VDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHG 1583
            V+RYKARLVAKG+ Q+ G+DY D+FSPV ++ T+R+F+A+A   NW++HQLDIN AFLHG
Sbjct: 963  VERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHG 1022

Query: 1584 YLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSC 1763
             L E++YM PP G   + P +VC L++SLYGLK ASRQWN +    L  FGF QS  D  
Sbjct: 1023 DLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYS 1082

Query: 1764 LFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRT 1943
            LF K  +  F            + S E +I+ VK  LD  F+IKDLG   YFLG+E +R+
Sbjct: 1083 LFTKRTNIGFIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRS 1142

Query: 1944 NLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLY 2123
            + G S+CQRKY L++LQD  LL  KP +TP     +L  D      DP  +RRLVG L+Y
Sbjct: 1143 DQGISVCQRKYALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIY 1202

Query: 2124 LNLTRPTLHF 2153
            L  TRP L F
Sbjct: 1203 LTHTRPDLAF 1212



 Score =  180 bits (456), Expect(2) = e-128
 Identities = 89/199 (44%), Positives = 119/199 (59%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            + F V  LSQF++ P  +H++AA  +LRY+K  P+ GLF+P+  D+ L  ++D DWA CP
Sbjct: 1210 LAFAVGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCP 1269

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            DSR SI+G+C FLG  L+                         VCE +W+  + +D QL 
Sbjct: 1270 DSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQ 1329

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               PI LFCDNQ+AL+I AN V HERTKH+EIDCH  +DQ +AGFI    + SS QL DI
Sbjct: 1330 DLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADI 1389

Query: 2684 FTKASGPGLLHAFISKLGM 2740
             TK   P +   F+ KLG+
Sbjct: 1390 LTKPLLPKMFQDFVCKLGL 1408



 Score = 82.4 bits (202), Expect(3) = 1e-26
 Identities = 40/104 (38%), Positives = 61/104 (58%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGVCTCGVLKQLSEKEM 606
           ++ +L  +I S+ QGN S+  YFT L+ LW E ++  P P C C    C           
Sbjct: 121 RISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTTEC----------- 169

Query: 607 NTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
              +I+FL GLNE +  VRSQ++LMDPLP + K +SM+L+ +++
Sbjct: 170 ---VIRFLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQQERE 210



 Score = 58.2 bits (139), Expect(3) = 1e-26
 Identities = 24/73 (32%), Positives = 43/73 (58%)
 Frame = +2

Query: 197 RSMLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAE 376
           +SML+ LG K KL FI+G +  P     +   W + + +V SW++ S+   ++   I+  
Sbjct: 42  QSMLLVLGTKNKLAFIDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMP 101

Query: 377 TAKELWDDLAQRF 415
           TA ++W+DL +R+
Sbjct: 102 TASQIWNDLKKRY 114



 Score = 30.8 bits (68), Expect(3) = 1e-26
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +2

Query: 854  RGRGVYRRTREEKAKLTCSHCQGTRHEMHECFKLIGYPEWYKKPPGERGRPYANLADISN 1033
            +G   ++R ++   K+ CSHC    H +  C+K  G P  +K   G     Y +++D   
Sbjct: 232  KGSKTFKRNKDYNTKV-CSHCGRIGHLVDSCYKKHGPPLQHKH--GRIVNQYQSVSDEDT 288

Query: 1034 APKIKNSTPMISAHSPGGSMNSTQSKG--ATIDMSG 1135
                   +  + +H+ G      Q +   A +  SG
Sbjct: 289  DDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSG 324


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  309 bits (792), Expect(2) = e-128
 Identities = 155/311 (49%), Positives = 203/311 (65%)
 Frame = +3

Query: 1224 IQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGS 1403
            + EPH+YA+A  +  W++AM+ E+ AL+ N TW LT LPP K+++GC+W+YKIK   DGS
Sbjct: 858  VSEPHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGS 917

Query: 1404 VDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHG 1583
            ++RYKARLVAKGY QV G+DY  +FSPVAKL TVRL +ALA + +W L QLD+NNAFLHG
Sbjct: 918  IERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHG 977

Query: 1584 YLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSC 1763
             L E++YM  P G       QVC L++SLYGLK ASRQW  +  + LI  G+ QSA D  
Sbjct: 978  DLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHS 1037

Query: 1764 LFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRT 1943
            LF+K  SSS               +   +I  +   LD  F IKDLG  +YFLG+E+ R 
Sbjct: 1038 LFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARN 1097

Query: 1944 NLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLY 2123
              G  L QRKY+LDIL D  ++  +P +TP     +L A SG+PL DP  +RRL+G L+Y
Sbjct: 1098 KSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIY 1157

Query: 2124 LNLTRPTLHFV 2156
            L  TRP + +V
Sbjct: 1158 LTTTRPDISYV 1168



 Score =  180 bits (456), Expect(2) = e-128
 Identities = 89/203 (43%), Positives = 124/203 (61%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I++ V  LSQF++ P T+H +A   +LRYLK  P  GLF+P    + L+AFSD DWAGC 
Sbjct: 1165 ISYVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCL 1224

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R SITG+ ++LG  LI                        T  EL+W++++  DL + 
Sbjct: 1225 DTRRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVP 1284

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            +  P  L+CDNQ+ALHI AN V HERTKHI+IDCH+ +++ ++G +    V S  QL DI
Sbjct: 1285 VHQPALLYCDNQSALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADI 1344

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            FTK+  P +  A  SKLGML+L+
Sbjct: 1345 FTKSLSPSMFTALYSKLGMLNLY 1367



 Score = 95.5 bits (236), Expect(2) = 3e-28
 Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +1

Query: 439 LQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKEMNTK 615
           LQ + +SI QG+ SV  YFT+L+ +WDE  N  P P+C C V C C V   L+++++  +
Sbjct: 101 LQLEASSIKQGDLSVTDYFTQLRIIWDELENFRPDPICVCIVKCICKVSSILAQRKLEDQ 160

Query: 616 LIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
            +QFL GLN+ +  VRS +LLMDPLP INK +S + + ++Q
Sbjct: 161 AMQFLRGLNDQYANVRSHVLLMDPLPPINKIFSYVAQQERQ 201



 Score = 60.8 bits (146), Expect(2) = 3e-28
 Identities = 28/73 (38%), Positives = 43/73 (58%)
 Frame = +2

Query: 197 RSMLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAE 376
           RSML AL AK K+ F++G    P      +  WK+ + MV SWL+ S+S  I    ++ +
Sbjct: 18  RSMLTALSAKNKVEFVDGSAPQPPSSDRIYSAWKRCNNMVVSWLVPSVSFSIRQSILWMD 77

Query: 377 TAKELWDDLAQRF 415
           +A+E+W DL  R+
Sbjct: 78  SAEEIWRDLKSRY 90


>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  308 bits (788), Expect(2) = e-127
 Identities = 153/310 (49%), Positives = 200/310 (64%)
 Frame = +3

Query: 1224 IQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGS 1403
            I EP +Y  A  +  W EA+  E+ AL+K  TW LT LPP K+++GC+WV+K+K   DGS
Sbjct: 833  IIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGS 892

Query: 1404 VDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHG 1583
            V+RYKARLVAKG+ Q+ G+DY D+FSPV ++ T+R+F+A+A   NW++HQLDIN AFLHG
Sbjct: 893  VERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHG 952

Query: 1584 YLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSC 1763
             L E++YM PP G   + P +VC L++SLYGLK  SRQWN +    L  FGF QS  D  
Sbjct: 953  DLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYS 1012

Query: 1764 LFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRT 1943
            LF K  +  F            + S E +I+ VK  LD  F+IKDLG   YFLG+E +R+
Sbjct: 1013 LFTKRTNIGFIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRS 1072

Query: 1944 NLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLY 2123
            + G S+CQRKY L++LQD  LL  KP +TP     +L  D      DP  +RRLVG L+Y
Sbjct: 1073 DQGISVCQRKYALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIY 1132

Query: 2124 LNLTRPTLHF 2153
            L  TRP L F
Sbjct: 1133 LTHTRPDLAF 1142



 Score =  180 bits (456), Expect(2) = e-127
 Identities = 89/199 (44%), Positives = 119/199 (59%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            + F V  LSQF++ P  +H++AA  +LRY+K  P+ GLF+P+  D+ L  ++D DWA CP
Sbjct: 1140 LAFAVGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCP 1199

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            DSR SI+G+C FLG  L+                         VCE +W+  + +D QL 
Sbjct: 1200 DSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQ 1259

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               PI LFCDNQ+AL+I AN V HERTKH+EIDCH  +DQ +AGFI    + SS QL DI
Sbjct: 1260 DLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADI 1319

Query: 2684 FTKASGPGLLHAFISKLGM 2740
             TK   P +   F+ KLG+
Sbjct: 1320 LTKPLLPKMFQDFVCKLGL 1338



 Score = 75.9 bits (185), Expect(3) = 4e-25
 Identities = 38/104 (36%), Positives = 58/104 (55%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGVCTCGVLKQLSEKEM 606
           ++ +L  +I S+ QGN S+  YFT L+ LW E ++  P P C C                
Sbjct: 78  RISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTT------------- 124

Query: 607 NTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
                +FL GLNE +  VRSQ++LMDPLP + K +SM+L+ +++
Sbjct: 125 -----RFLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQQERE 163



 Score = 55.8 bits (133), Expect(3) = 4e-25
 Identities = 22/71 (30%), Positives = 41/71 (57%)
 Frame = +2

Query: 203 MLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAETA 382
           ML+ LG K KL F++G +  P     +   W + + +V SW++ S+   ++   I+  TA
Sbjct: 1   MLLVLGTKNKLAFVDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTA 60

Query: 383 KELWDDLAQRF 415
            ++W+DL +R+
Sbjct: 61  SQIWNDLKKRY 71



 Score = 34.3 bits (77), Expect(3) = 4e-25
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = +2

Query: 854  RGRGVYRRTREEKAKLTCSHCQGTRHEMHECFKLIGYPEWYKKPPGERGRPYANLADISN 1033
            +G   ++R ++   K+ CSHC    H +  C+K  G P  +K   G     Y +++D   
Sbjct: 185  KGSKTFKRNKDYNTKV-CSHCGRIGHLVDSCYKKHGPPLQHKH--GRIVNQYQSVSDEDT 241

Query: 1034 APKIKNSTPMISAHSPGGSMNSTQSKG--ATIDMSGMI 1141
                   +  + +H+ G      Q +   A +  SGMI
Sbjct: 242  DDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGMI 279


>gb|AJY78065.1| putative polyprotein [Glycine max]
          Length = 523

 Score =  312 bits (800), Expect(2) = e-126
 Identities = 152/308 (49%), Positives = 203/308 (65%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP +Y +A  + HW+ AM +E+ AL KN TW +  LPP  K IGCKWVYK+K K +G ++
Sbjct: 8    EPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIE 67

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKARLVAKGYNQV GIDY+++FSPVAK+ TVR  +A+A + NW LHQLD+NNAFLHG L
Sbjct: 68   RYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDL 127

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
            +ED+YM  P G + A P  VC L++SLYGLK ASR+W  +    L+  G+ QS  D  LF
Sbjct: 128  QEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLF 187

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
              +  ++F                  +   +K+ LD  F IK+LG  +YFLG+E+  + L
Sbjct: 188  TLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRL 247

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G ++ QRKY LD+L+D  LL CKPA+TP    +KL + +G+P  D   +RR+VG LLYLN
Sbjct: 248  GITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLN 307

Query: 2130 LTRPTLHF 2153
             TRP + F
Sbjct: 308  TTRPDIAF 315



 Score =  172 bits (435), Expect(2) = e-126
 Identities = 83/210 (39%), Positives = 119/210 (56%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I F  Q LSQF+  P   H+ AA  +LRYLK  P  G+F+    ++ L  +SD DWAGC 
Sbjct: 313  IAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCM 372

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            DSR SI+GYC F+G  L+                          CEL+W+ ++ +DL++ 
Sbjct: 373  DSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQ 432

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            +     L+CDNQ+A+HI +N V HERTKH+EIDCH+ +++   G +    V +S Q+ D 
Sbjct: 433  LTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADF 492

Query: 2684 FTKASGPGLLHAFISKLGMLDLHHAPT*GG 2773
             TKA  P   H F+SKL M++++H    GG
Sbjct: 493  LTKALAPPKFHDFVSKLSMINIYHDKLEGG 522


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  304 bits (778), Expect(2) = e-126
 Identities = 154/326 (47%), Positives = 207/326 (63%)
 Frame = +3

Query: 1179 QEMWRIMLTLHILLDIQEPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSI 1358
            Q  + + L  HI     EP +YA+A  +  W +AM  E+ AL++  TW +  +P   K I
Sbjct: 87   QHTFALSLVSHI-----EPKSYAEAIKSDCWKQAMQLELNALDQTGTWTVVDIPSQVKPI 141

Query: 1359 GCKWVYKIKTKPDGSVDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHN 1538
            GCKWV +IK   DGS++RYKARLVAKGYNQ+ G+DY+D+FSPVAK+  VRL IALA++++
Sbjct: 142  GCKWVCRIKYNDDGSIERYKARLVAKGYNQIEGLDYFDTFSPVAKITIVRLVIALASINH 201

Query: 1539 WALHQLDINNAFLHGYLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCA 1718
            W LHQLD+NNAFLHG L+E++Y   P G S   P QVC L +SLYGLK ASR+W  +   
Sbjct: 202  WFLHQLDVNNAFLHGDLQENVYKKIPPGLSTFKPNQVCKLSKSLYGLKQASRKWYEKLTT 261

Query: 1719 KLISFGFTQSAHDSCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKD 1898
             LIS  + Q+A D+ LF K  S +F              +   +   +K+ L   F IKD
Sbjct: 262  LLISNDYKQAASDASLFTKLTSETFTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIKD 321

Query: 1899 LGVARYFLGMEITRTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPL 2078
            LG+ +YFLG+E+  ++ G SLCQRKY LD+L D  LL  KP +TP  P +KL  D+    
Sbjct: 322  LGILKYFLGLEVAHSHSGISLCQRKYCLDLLNDSGLLGSKPVSTPSDPSIKLHNDTSLLF 381

Query: 2079 PDPDRFRRLVG*LLYLNLTRPTLHFV 2156
            PD   +RRL+G L+YLN TRP + F+
Sbjct: 382  PDISAYRRLIGRLIYLNTTRPDITFI 407



 Score =  178 bits (452), Expect(2) = e-126
 Identities = 86/210 (40%), Positives = 122/210 (58%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            ITF  Q LSQF++ P  +H+ A   +L+YLKG P  G+F+P    + ++ ++D DW GC 
Sbjct: 404  ITFITQQLSQFLSKPTQTHYHATLRVLKYLKGSPGKGIFFPRASGLHIQGYTDADWVGCK 463

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            D+R SI+G+C FLG  LI                          CE++W+ ++  DLQ+ 
Sbjct: 464  DTRRSISGHCFFLGQSLICWRTKKQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQVQ 523

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
                  L+CDNQ+A+HI +N V HERTKH+EIDCHI +++ +AG      V +  Q+GD 
Sbjct: 524  CVQLPVLYCDNQSAMHIASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGDS 583

Query: 2684 FTKASGPGLLHAFISKLGMLDLHHAPT*GG 2773
            FTKA         +SKLGMLD++H PT GG
Sbjct: 584  FTKALYLQPFSLLLSKLGMLDIYHPPTCGG 613


>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 810

 Score =  303 bits (775), Expect(2) = e-125
 Identities = 152/306 (49%), Positives = 198/306 (64%)
 Frame = +3

Query: 1236 HTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVDRY 1415
            + + +A T   W +AM  E+ ALE+N TW L TLPPGKK IGCKWVY+ K K +G+V+RY
Sbjct: 302  YIFKEASTKDCWKQAMIAELDALERNRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERY 361

Query: 1416 KARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYLEE 1595
            KARLVAKG+ Q  GIDY+++FSPVAK+ ++R  +ALA+ HNW +HQLDI+NAFLHG L+E
Sbjct: 362  KARLVAKGFTQTEGIDYFETFSPVAKITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDE 421

Query: 1596 DIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLFVK 1775
            ++YM PP G        VC L++SLYGLK ASR WN +  ++L   G+ QS  D  LFV 
Sbjct: 422  EVYMRPPQGLRLPSSKLVCKLEKSLYGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVN 481

Query: 1776 SDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNLGT 1955
               SS             + +   +I  VK  L + F IKDLG  ++FLG+E+ R+  G 
Sbjct: 482  FTGSSITILLIYVDDIVLSGNDMTEIKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGI 541

Query: 1956 SLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLNLT 2135
             L QRKY L+++ +  LL CKPA TP  P +KL  D G  L DP  FRRL+G LLYL  T
Sbjct: 542  LLNQRKYCLELIDETGLLGCKPAPTPADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNT 601

Query: 2136 RPTLHF 2153
            RP + F
Sbjct: 602  RPDISF 607



 Score =  176 bits (446), Expect(2) = e-125
 Identities = 86/204 (42%), Positives = 119/204 (58%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I+F VQ LSQFV+ P   H +AA  ++RYLKG P LGLFY +   + ++AFSD DWA C 
Sbjct: 605  ISFSVQQLSQFVSKPREPHMQAALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCA 664

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             +R S+TGYC+F+G  LI                          CEL+W+ ++   + + 
Sbjct: 665  TTRRSVTGYCVFIGNSLISWKSKKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIK 724

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
            IPTP   F D+Q+A+ I  N   HERTKHIE+DCH+ + + + G +    V S+ QL D 
Sbjct: 725  IPTPFATFSDSQSAIQISKNPTFHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADA 784

Query: 2684 FTKASGPGLLHAFISKLGMLDLHH 2755
            FTKA  P   H  ISKLG+L+++H
Sbjct: 785  FTKALFPKPFHTAISKLGLLNIYH 808


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  292 bits (747), Expect(2) = e-124
 Identities = 152/309 (49%), Positives = 193/309 (62%), Gaps = 1/309 (0%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP TY QA  +P W EAM  E+ ALE+NHTW LT LP G + IGCKWVYKIK   DG+V+
Sbjct: 620  EPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVE 679

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            RYKA+LVAKG+ Q  GIDY ++FSP+AKL T+R  +A+A + +W+ HQ+D+ NAFLHG L
Sbjct: 680  RYKAQLVAKGFTQREGIDYKETFSPMAKLTTIRCLLAIAAVRHWSFHQMDVQNAFLHGDL 739

Query: 1590 EEDIYMDPPSGYSKAGPG-QVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCL 1766
             E++YM  P G+ + G    VC L +SLYGLK ASR W  +F A +   GF QS  D  L
Sbjct: 740  LEEVYMQLPPGFCRQGETLMVCRLNKSLYGLKQASRSWFQKFSATIQQNGFHQSMADYSL 799

Query: 1767 FVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTN 1946
            F K   +SF            T + E  I A+K  L   F IKDLG  RYFLG+E+ R+ 
Sbjct: 800  FTKISGNSFIVVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARST 859

Query: 1947 LGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYL 2126
             G  + QRKY LDIL +  LL  KP  TP     KL+   G  L +P  +RRLVG L+YL
Sbjct: 860  DGILISQRKYTLDILDEAGLLGAKPLLTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYL 919

Query: 2127 NLTRPTLHF 2153
             +TR  + +
Sbjct: 920  TITRXEISY 928



 Score =  184 bits (467), Expect(2) = e-124
 Identities = 89/203 (43%), Positives = 119/203 (58%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            I++ V +LSQF+  P   H     HLL+YLKG P  GL++PA G++ LR F D DWA C 
Sbjct: 926  ISYSVHILSQFMQEPRKPHLHVVHHLLQYLKGAPGQGLYFPAKGNLLLRGFCDADWARCS 985

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             +R S+TGYCIFLGG LI                          CEL W+ ++  DL++ 
Sbjct: 986  ITRRSVTGYCIFLGGALISWKTKKQTTVSRSSAESEYRAMASITCELTWLKYLLDDLKVE 1045

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               P  LF D++AALHI AN V HE TKHIEIDCH+ +++ + G I    VPSS QL D+
Sbjct: 1046 HSQPAKLFYDSKAALHIAANPVYHECTKHIEIDCHVVRERIQLGAIVTAHVPSSCQLVDL 1105

Query: 2684 FTKASGPGLLHAFISKLGMLDLH 2752
            FTK     + H+ ++K G+LD+H
Sbjct: 1106 FTKPLNSSIFHSLLNKFGVLDIH 1128



 Score = 92.8 bits (229), Expect(2) = 1e-32
 Identities = 44/104 (42%), Positives = 68/104 (65%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGVCTCGVLKQLSEKEM 606
           ++YQ++R I    QG  S+ VY+TKLK  WDE ++      C     +CG L++L E + 
Sbjct: 124 RIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSSYHEVLSC-----SCGGLEKLKEMDE 178

Query: 607 NTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQ 738
             +++QFL+GLN+S+  +R QILLM PLPD  + YS++L+ +KQ
Sbjct: 179 KERVMQFLMGLNDSYAAIRGQILLMQPLPDTRRVYSLVLQQEKQ 222



 Score = 78.2 bits (191), Expect(2) = 1e-32
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +2

Query: 197 RSMLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAE 376
           R+M I+L AK K+GF+ G I+ P     +F  W++ + MV SWLLNSI  DI    IYAE
Sbjct: 45  RAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASSVIYAE 104

Query: 377 TAKELWDDLAQRF 415
           T  E+W DL +RF
Sbjct: 105 TTSEIWADLRERF 117


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  286 bits (731), Expect(2) = e-124
 Identities = 148/308 (48%), Positives = 189/308 (61%)
 Frame = +3

Query: 1230 EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYKIKTKPDGSVD 1409
            EP +YA+A ++ HW EAM  E+  LE NHTW LT+LPPGKK IGC+WVYKIK   DG+++
Sbjct: 629  EPTSYAEATSHSHWQEAMQSELATLEANHTWSLTSLPPGKKPIGCRWVYKIKXHSDGTIE 688

Query: 1410 RYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLDINNAFLHGYL 1589
            R+KARLVAKGY Q+ GIDY D+FSP AK++ VR  +ALA   NW+LHQL           
Sbjct: 689  RFKARLVAKGYTQLEGIDYHDTFSPTAKMIXVRCLLALAAAQNWSLHQL----------- 737

Query: 1590 EEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGFTQSAHDSCLF 1769
              D +M PP    + G   VCHL +SLYGLK ASRQW  +F   + + GF QS  D  LF
Sbjct: 738  --DKFMSPPPSLRRQGENLVCHLHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLF 795

Query: 1770 VKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYFLGMEITRTNL 1949
                  SF            T +    I+A+K FL   F IKDLG  +YFLG+E++R+  
Sbjct: 796  TCRKGKSFTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKK 855

Query: 1950 GTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPDPDRFRRLVG*LLYLN 2129
            G S+ QRKY L+IL+D   L  KP   P     KL +DSG  L  P ++RRLVG L+YL 
Sbjct: 856  GISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKL-SDSGELLKGPSQYRRLVGRLIYLT 914

Query: 2130 LTRPTLHF 2153
            +TRP + +
Sbjct: 915  ITRPDITY 922



 Score =  189 bits (481), Expect(2) = e-124
 Identities = 96/207 (46%), Positives = 124/207 (59%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            IT+ V +LS+F++ P   H EAA  +LRYLK  P  GLF+P+  D+SLRAFSD DWAGCP
Sbjct: 920  ITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDXDWAGCP 979

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
             SR S TGYC+FLG  LI                        T CEL W+  +  DL++ 
Sbjct: 980  ISRRSXTGYCVFLGSSLISWRTKRQKTVSLSSXEAEYRAMAGTCCELSWLRSLLKDLRIL 1039

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
             P P  L+CDN AALHI  N V HERT+HIE+DCH  +D+ + G +  + + S+ Q  D+
Sbjct: 1040 HPKPALLYCDNTAALHIAVNPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTDQXADV 1099

Query: 2684 FTKASGPGLLHAFISKLGMLDLHHAPT 2764
            FTK  G       I KLG+LD+ H+PT
Sbjct: 1100 FTKPLGKETFSTMIHKLGVLDI-HSPT 1125


>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  300 bits (768), Expect(2) = e-124
 Identities = 158/320 (49%), Positives = 200/320 (62%), Gaps = 5/320 (1%)
 Frame = +3

Query: 1209 HILLDIQ---EPHTYAQACTNPHWIEAMNQEITALEKNHTWDLTTLPPGKKSIGCKWVYK 1379
            H ++ I    EP +YA+A     WI+AM  E+ AL+ N+TW LT LPP K +IGC+WVYK
Sbjct: 797  HFVMSISSTVEPSSYAEASQYDCWIKAMEAELQALQSNNTWKLTLLPPHKTAIGCRWVYK 856

Query: 1380 IKTKPDGSVDRYKARLVAKGYNQVYGIDYWDSFSPVAKLVTVRLFIALATLHNWALHQLD 1559
            IK + DGS++RYKARLVAKGY Q+ G+DY  +FSPVAKL  VRL +A+   + W L QLD
Sbjct: 857  IKHRADGSIERYKARLVAKGYTQMEGLDYLYAFSPVAKLTIVRLLLAMVAFNQWHLRQLD 916

Query: 1560 INNAFLHGYLEEDIYMDPPSGYSKAGPGQVCHLKRSLYGLKHASRQWNTEFCAKLISFGF 1739
            +NNAFLHG L+E++YM  P G S      VC L+RSLY LK ASRQW T+    LIS GF
Sbjct: 917  VNNAFLHGELDEEVYMQVPPGLSVPNSQMVCRLQRSLYELKQASRQWFTKLSGLLISLGF 976

Query: 1740 TQSAHDSCLFVKSDSSSFXXXXXXXXXXXXTESLERDILAVKHFLDDLFTIKDLGVARYF 1919
             +S  D  LF++   S              T + E +I  V   LD  F IKDLG  +YF
Sbjct: 977  EKSHSDHSLFLRFTGSIITALLVYVDDIILTGNSESEIQDVIKLLDQAFKIKDLGNLKYF 1036

Query: 1920 LGMEITRTNLGTSLCQRKYILDILQDVHLLDCKPATTPFPPGLKLVADSGSPLPD--PDR 2093
            LGMEI R++ G  LCQRKY LDIL D  +L C+P  TP     KL A +G+PL       
Sbjct: 1037 LGMEIARSSSGIHLCQRKYTLDILSDSGMLGCQPNVTPMDYSTKLQATAGTPLSTEASSS 1096

Query: 2094 FRRLVG*LLYLNLTRPTLHF 2153
            +RRL+G L+YL  TRP + +
Sbjct: 1097 YRRLIGRLIYLTNTRPDITY 1116



 Score =  175 bits (443), Expect(2) = e-124
 Identities = 88/198 (44%), Positives = 116/198 (58%)
 Frame = +2

Query: 2144 ITFCVQLLSQFVNNPLTSHWEAATHLLRYLKGCPSLGLFYPAGGDVSLRAFSDVDWAGCP 2323
            IT+ VQ LSQ+++NP + H +AA  +LRYLKG    G+F  A G   LRAFSD DWAGC 
Sbjct: 1114 ITYAVQQLSQYMSNPTSVHQQAAYRILRYLKGTSGSGIFLSATGTPQLRAFSDSDWAGCQ 1173

Query: 2324 DSRMSITGYCIFLGGCLIXXXXXXXXXXXXXXXXXXXXXXXXTVCELKWISFVSSDLQLS 2503
            DSR S TG+ I+LG   +                        T CEL+W++++  D + +
Sbjct: 1174 DSRKSTTGFVIYLGSSPVSWQSKKQSTVSRSSSEAEYRAMATTTCELQWLTYLLQDFRHN 1233

Query: 2504 IPTPIPLFCDNQAALHIVANLVSHERTKHIEIDCHITKDQFKAGFIAPRKVPSSLQLGDI 2683
               P  ++CDNQ+A+ I  N V HERTKHIEIDCHI + +  +G +    VPSSLQL DI
Sbjct: 1234 FTKPATIYCDNQSAIQIATNPVFHERTKHIEIDCHIVRQKVTSGLLKLLPVPSSLQLADI 1293

Query: 2684 FTKASGPGLLHAFISKLG 2737
            FTKA  P +     +KLG
Sbjct: 1294 FTKALPPTVFQNLCNKLG 1311



 Score = 93.2 bits (230), Expect(2) = 7e-27
 Identities = 41/111 (36%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
 Frame = +1

Query: 427 QLYQLQRKIASINQGNSSVVVYFTKLKKLWDEYNNLAPTPVCHCGV-CTCGVLKQLSEKE 603
           ++  LQ++ +++ QG  SV  YFT+L+ +WDE  N  P P C C V C+C     +++++
Sbjct: 90  RISDLQQEASTLRQGTLSVTEYFTRLRVIWDEIENFRPDPACTCNVRCSCSAFAIIAQRK 149

Query: 604 MNTKLIQFLIGLNESFEQVRSQILLMDPLPDINKAYSMMLRIKKQRVRWSS 756
           +  + +QFL GLN+ +  +RS +LLMDP+P I K +S + + ++Q +  SS
Sbjct: 150 LEDRAMQFLRGLNDQYTNIRSHVLLMDPIPAITKIFSYVAQQERQLLGNSS 200



 Score = 58.5 bits (140), Expect(2) = 7e-27
 Identities = 25/73 (34%), Positives = 44/73 (60%)
 Frame = +2

Query: 197 RSMLIALGAKTKLGFINGKIEVPEVDSPNFEQWKKVDCMVTSWLLNSISRDIVDGFIYAE 376
           RSM+IAL AK KL F++G    P      +  W++ + MV SW+++S++  I    ++ +
Sbjct: 11  RSMIIALSAKNKLEFVDGSAPEPLKTDRTYGAWRRCNNMVLSWIVHSVAASIRQSILWMD 70

Query: 377 TAKELWDDLAQRF 415
            A+++W DL  R+
Sbjct: 71  KAEDIWRDLKTRY 83