BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00000024
         (649 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   417   e-140
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   425   e-137
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m...   422   e-136
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   422   e-136
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   421   e-135
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 420   e-135
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   420   e-135
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   419   e-135
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   417   e-134
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   417   e-134
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   417   e-134
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]                  417   e-134
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ...   417   e-134
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   377   e-119
dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot...   314   4e-96
dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot...   314   6e-96
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             313   1e-95
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   309   3e-94
gb|AEA11495.1| RNA dependent RNA polymerase, partial [Potato vir...   276   8e-89
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   288   2e-86

>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
            virus]
          Length = 711

 Score =  417 bits (1071), Expect = e-140
 Identities = 199/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 455  MRRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEIL 514

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 515  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 574

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            G AQIYAGDDCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 575  GAAQIYAGDDCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 634

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 635  KDPLKLHASLELAKAQKKAGVKDAITN 661


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  425 bits (1092), Expect = e-137
 Identities = 204/207 (98%), Positives = 207/207 (100%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1129 MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1188

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1189 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1248

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1249 GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1308

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGV+DAI+N
Sbjct: 1309 KDPLKLHASLELAKAQKKAGVRDAITN 1335


>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score =  422 bits (1086), Expect = e-136
 Identities = 202/207 (97%), Positives = 206/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1131 MRRFRDALGPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1190

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTLSIMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1191 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLSIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1250

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1251 GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1310

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQ+KAGVKDAI+N
Sbjct: 1311 KDPLKLHASLELAKAQRKAGVKDAIAN 1337


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  422 bits (1085), Expect = e-136
 Identities = 202/207 (97%), Positives = 207/207 (100%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFR+ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFREALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  421 bits (1082), Expect = e-135
 Identities = 201/207 (97%), Positives = 206/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  420 bits (1080), Expect = e-135
 Identities = 202/207 (97%), Positives = 206/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDALSPNNIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFEIL
Sbjct: 1112 MRRFRDALSPNNIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFEIL 1171

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPE
Sbjct: 1172 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPE 1231

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSFALLK+RIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1232 GTAQIYAGDDCAIAQVCPEKPSFALLKDRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1291

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1292 KDPLKLHASLELAKAQKKAGVKDAITN 1318


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  420 bits (1079), Expect = e-135
 Identities = 200/207 (96%), Positives = 206/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  419 bits (1077), Expect = e-135
 Identities = 200/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  417 bits (1073), Expect = e-134
 Identities = 200/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  417 bits (1073), Expect = e-134
 Identities = 200/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  417 bits (1073), Expect = e-134
 Identities = 200/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQIYAGDDCAIAQVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GTAQIYAGDDCAIAQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  417 bits (1071), Expect = e-134
 Identities = 199/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            G AQIYAGDDCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GAAQIYAGDDCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  417 bits (1071), Expect = e-134
 Identities = 199/207 (96%), Positives = 205/207 (99%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1124 MRRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFEIL 1183

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+IPE
Sbjct: 1184 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDIPE 1243

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            G AQIYAGDDCAI+QVCPEKPSF+LLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI
Sbjct: 1244 GAAQIYAGDDCAISQVCPEKPSFSLLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 1303

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLHASLELAKAQKKAGVKDAI+N
Sbjct: 1304 KDPLKLHASLELAKAQKKAGVKDAITN 1330


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  377 bits (968), Expect = e-119
 Identities = 178/207 (85%), Positives = 192/207 (92%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRR+RDAL PNNIMINCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFEIL
Sbjct: 1105 MRRYRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFEIL 1164

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+FNLPEWVIEGYLDIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF IP+
Sbjct: 1165 KAKFFNLPEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHIPD 1224

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
              AQ+YAGDDCAIA+VC EKPSFALLKNRIALQAKPAY PQ RG WAEFCGYLITPKGLI
Sbjct: 1225 HVAQLYAGDDCAIAEVCQEKPSFALLKNRIALQAKPAYAPQTRGAWAEFCGYLITPKGLI 1284

Query: 81   KDPLKLHASLELAKAQKKAGVKDAISN 1
            KDPLKLH+SLELAKA +K G KDAI+N
Sbjct: 1285 KDPLKLHSSLELAKALRKQGRKDAITN 1311


>dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
          Length = 1387

 Score =  314 bits (805), Expect = 4e-96
 Identities = 150/195 (76%), Positives = 168/195 (86%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFR+AL PN+I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1132 MRRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEIL 1191

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP 
Sbjct: 1192 KAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPP 1251

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQ+YAGDD AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLI
Sbjct: 1252 GTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLI 1311

Query: 81   KDPLKLHASLELAKA 37
            KDP KL ASL+L +A
Sbjct: 1312 KDPAKLFASLKLLQA 1326


>dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
          Length = 1387

 Score =  314 bits (804), Expect = 6e-96
 Identities = 150/195 (76%), Positives = 167/195 (85%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFR+AL PN+I INCE TP DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1132 MRRFREALGPNHIKINCEATPNDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEIL 1191

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP 
Sbjct: 1192 KAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPP 1251

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQ+YAGDD AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLI
Sbjct: 1252 GTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLI 1311

Query: 81   KDPLKLHASLELAKA 37
            KDP KL ASL+L +A
Sbjct: 1312 KDPAKLFASLKLLQA 1326


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  313 bits (801), Expect = 1e-95
 Identities = 149/195 (76%), Positives = 167/195 (85%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFR+ L PN+I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1131 MRRFREVLGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFEIL 1190

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP 
Sbjct: 1191 KAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPP 1250

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQ+YAGDD AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLI
Sbjct: 1251 GTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLI 1310

Query: 81   KDPLKLHASLELAKA 37
            KDP KL ASL+L +A
Sbjct: 1311 KDPAKLFASLKLLQA 1325


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  309 bits (792), Expect = 3e-94
 Identities = 148/195 (75%), Positives = 166/195 (85%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRRFR+AL PN+I INCE TP+DLSR++ NYWDF   SYANDFTAFDQSQD AMLQFEIL
Sbjct: 1131 MRRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFEIL 1190

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+FN+P  +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+IP 
Sbjct: 1191 KAKHFNIPGEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDIPP 1250

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
            GTAQ+YAGDD AIA V PE+PSF L+   +AL+AKP Y PQ  G WAEFCGYLITPKGLI
Sbjct: 1251 GTAQLYAGDDSAIACVPPERPSFKLIAKSLALEAKPVYAPQVAGAWAEFCGYLITPKGLI 1310

Query: 81   KDPLKLHASLELAKA 37
            KDP KL ASL+L +A
Sbjct: 1311 KDPAKLFASLKLLQA 1325


>gb|AEA11495.1| RNA dependent RNA polymerase, partial [Potato virus X]
          Length = 422

 Score =  276 bits (706), Expect = 8e-89
 Identities = 127/196 (64%), Positives = 160/196 (81%)
 Frame = -2

Query: 621 MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
           MR FR A  P  + INCE TP+D+S W LN W+F +PS AND+TAFDQSQDGAMLQFE+L
Sbjct: 167 MRWFRQAFQPKEVFINCETTPEDMSAWALNNWNFGRPSLANDYTAFDQSQDGAMLQFEVL 226

Query: 441 KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
           KAK+  +PE +I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+IP 
Sbjct: 227 KAKHHCIPEEIIQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPA 286

Query: 261 GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLI 82
           GTAQ+YAGDD A+  V   K SF  L++++ L++KP  T Q++G W EFCG+LITPKG++
Sbjct: 287 GTAQVYAGDDSALDCVPEVKHSFHRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVM 346

Query: 81  KDPLKLHASLELAKAQ 34
           KDP+KLH SL+LA+A+
Sbjct: 347 KDPIKLHVSLKLAEAK 362


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1 [Cassava common mosaic
            virus]
          Length = 1449

 Score =  288 bits (736), Expect = 2e-86
 Identities = 143/212 (67%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
 Frame = -2

Query: 621  MRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEIL 442
            MRR RD   P +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFEIL
Sbjct: 1198 MRRIRDIYMPEHIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFEIL 1257

Query: 441  KAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPE 262
            KAK+ N+PEWV+EGYLDIKL  +IFLGTLSIMRLTGE  TFDANTECNIAYTHTRF+IPE
Sbjct: 1258 KAKHHNIPEWVLEGYLDIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDIPE 1317

Query: 261  GTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQ-----AKPAYTPQERGQWAEFCGYLIT 97
            G AQ     D A+   C EKPSF L+++ ++L+      KP    Q  G+WAEFCGYLIT
Sbjct: 1318 GVAQ-----DSAMDATCLEKPSFKLIESELSLKLYAGDCKPCLKAQIPGEWAEFCGYLIT 1372

Query: 96   PKGLIKDPLKLHASLELAKAQKKAGVKDAISN 1
            PKGLIKDPLKL AS  LAK + K  + + + N
Sbjct: 1373 PKGLIKDPLKLAASFRLAKERGKRELDNCLEN 1404