BLASTX nr result
ID: Rehmannia28_contig00000006
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00000006
(504 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 254 6e-78
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 254 2e-75
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 254 2e-75
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 252 8e-75
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 252 8e-75
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 252 8e-75
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 252 8e-75
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 251 3e-74
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 250 5e-74
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 249 7e-74
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 249 9e-74
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 239 2e-70
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 236 5e-69
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 206 1e-58
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 187 4e-52
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 178 6e-49
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 178 6e-49
dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot... 178 6e-49
dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot... 178 6e-49
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 163 1e-43
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 254 bits (648), Expect = 6e-78
Identities = 126/130 (96%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRN
Sbjct: 64 GYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRN 123
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGCQGIT
Sbjct: 124 SKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 183
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 184 APRVQILLDN 193
Score = 84.0 bits (206), Expect = 6e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALIS
Sbjct: 60 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 100
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 254 bits (648), Expect = 2e-75
Identities = 126/130 (96%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 84.0 bits (206), Expect = 7e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 769
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 254 bits (648), Expect = 2e-75
Identities = 126/130 (96%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 84.0 bits (206), Expect = 7e-16
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 769
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 252 bits (644), Expect = 8e-75
Identities = 124/130 (95%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 252 bits (644), Expect = 8e-75
Identities = 124/130 (95%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 252 bits (644), Expect = 8e-75
Identities = 124/130 (95%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 252 bits (644), Expect = 8e-75
Identities = 124/130 (95%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 251 bits (640), Expect = 3e-74
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 250 bits (638), Expect = 5e-74
Identities = 123/130 (94%), Positives = 126/130 (96%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 82.8 bits (203), Expect = 2e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALIS 769
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 249 bits (637), Expect = 7e-74
Identities = 120/130 (92%), Positives = 127/130 (97%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINATHRN
Sbjct: 721 GYIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINATHRN 780
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 781 SKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 840
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 841 APRVQILLDN 850
Score = 83.2 bits (204), Expect = 1e-15
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGYIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALIS
Sbjct: 717 KLPQGYIEAFAMTHANLELIILTGDPRQSTHHEANEEALIS 757
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 249 bits (636), Expect = 9e-74
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFA+THASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRN
Sbjct: 733 GYLEAFALTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRN 792
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGCQGIT
Sbjct: 793 SKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGIT 852
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 853 APRVQILLDN 862
Score = 81.6 bits (200), Expect = 4e-15
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFA+THASLELVILTGDPRQSTHHE+NEEALIS
Sbjct: 729 KLPQGYLEAFALTHASLELVILTGDPRQSTHHESNEEALIS 769
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 239 bits (611), Expect = 2e-70
Identities = 116/130 (89%), Positives = 123/130 (94%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL PATTI+S LSRYYINATHRN
Sbjct: 740 GYLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPPATTIYSTLSRYYINATHRN 799
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SK+LANKLGVYS+NSCPL VTYGFQP PGMHLLVPSL+KKAAFTD GHKVSTYAGCQGIT
Sbjct: 800 SKYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKAAFTDVGHKVSTYAGCQGIT 859
Query: 475 APRVQILLDN 504
APRVQILLDN
Sbjct: 860 APRVQILLDN 869
Score = 79.0 bits (193), Expect = 4e-14
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALIS
Sbjct: 736 KLPQGYLEAFALTHANLELAILTGDPRQSTHHESNEEALIS 776
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 236 bits (601), Expect = 5e-69
Identities = 115/130 (88%), Positives = 123/130 (94%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFA+THA+LELVILTGDPRQSTHHE+NEEALISKL PATTI+S SRYYINAT RN
Sbjct: 738 GYLEAFALTHANLELVILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINATLRN 797
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
SKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVS+YAGCQGIT
Sbjct: 798 SKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSSYAGCQGIT 857
Query: 475 APRVQILLDN 504
AP+VQILLDN
Sbjct: 858 APKVQILLDN 867
Score = 80.5 bits (197), Expect = 1e-14
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFA+THA+LELVILTGDPRQSTHHE+NEEALIS
Sbjct: 734 KLPQGYLEAFALTHANLELVILTGDPRQSTHHESNEEALIS 774
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 206 bits (524), Expect = 1e-58
Identities = 100/130 (76%), Positives = 114/130 (87%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G LEAFA+ L+L ILTGDPRQSTHHE+NE+A+I++L PAT IFS L RYYINATHRN
Sbjct: 714 GFLEAFALCRPGLKLAILTGDPRQSTHHESNEQAMIAQLEPATKIFSALCRYYINATHRN 773
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
K LANKLGVYSSN PL V+YGF+P+PG+HLLVPSL+KKAAF DAGHKVSTYAGCQGIT
Sbjct: 774 VKELANKLGVYSSNPSPLHVSYGFRPEPGLHLLVPSLVKKAAFADAGHKVSTYAGCQGIT 833
Query: 475 APRVQILLDN 504
AP+VQILLD+
Sbjct: 834 APKVQILLDS 843
Score = 65.1 bits (157), Expect = 2e-09
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQG++EAFA+ L+L ILTGDPRQSTHHE+NE+A+I+
Sbjct: 710 KLPQGFLEAFALCRPGLKLAILTGDPRQSTHHESNEQAMIA 750
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1 [Cassava common mosaic
virus]
Length = 1449
Score = 187 bits (476), Expect = 4e-52
Identities = 88/130 (67%), Positives = 112/130 (86%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EAFA+TH ++EL++LTGD +QS HHE NE+A+I++L P+T IFS+ SRYYINATHRN
Sbjct: 808 GYVEAFAVTHPNVELIVLTGDNKQSVHHETNEQAMIAQLEPSTQIFSQFSRYYINATHRN 867
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
+K LAN LGVYS N+ LK+T+GFQP +HLLVPSL+KKAAF++AGHK STYAGCQGIT
Sbjct: 868 AKKLANMLGVYSDNNKELKITHGFQPIKDIHLLVPSLIKKAAFSEAGHKTSTYAGCQGIT 927
Query: 475 APRVQILLDN 504
A ++QILLD+
Sbjct: 928 ARKLQILLDS 937
Score = 66.6 bits (161), Expect = 7e-10
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLPQGY+EAFA+TH ++EL++LTGD +QS HHE NE+A+I+
Sbjct: 804 KLPQGYVEAFAVTHPNVELIVLTGDNKQSVHHETNEQAMIA 844
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 178 bits (452), Expect = 6e-49
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EA+ +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN
Sbjct: 740 GYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRN 799
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
+ LANKL VYS K+T GFQP +HLLVPSL+KK+A+ + GHKVSTYAGCQGIT
Sbjct: 800 KRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGIT 859
Query: 475 APRVQILLDN 504
AP++QILLDN
Sbjct: 860 APKIQILLDN 869
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLP GYIEA+ +ELVILTGD RQSTHHE NE+A+IS
Sbjct: 736 KLPAGYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMIS 776
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 178 bits (452), Expect = 6e-49
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EA+ +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN
Sbjct: 740 GYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRN 799
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
+ LANKL VYS K+T GFQP +HLLVPSL+KK+A+ + GHKVSTYAGCQGIT
Sbjct: 800 KRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGIT 859
Query: 475 APRVQILLDN 504
AP++QILLDN
Sbjct: 860 APKIQILLDN 869
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLP GYIEA+ +ELVILTGD RQSTHHE NE+A+IS
Sbjct: 736 KLPAGYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMIS 776
>dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
Length = 1387
Score = 178 bits (452), Expect = 6e-49
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EA+ +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN
Sbjct: 741 GYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRN 800
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
+ LANKL VYS K+T GFQP +HLLVPSL+KK+A+ + GHKVSTYAGCQGIT
Sbjct: 801 KRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGIT 860
Query: 475 APRVQILLDN 504
AP++QILLDN
Sbjct: 861 APKIQILLDN 870
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLP GYIEA+ +ELVILTGD RQSTHHE NE+A+IS
Sbjct: 737 KLPAGYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMIS 777
>dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
Length = 1387
Score = 178 bits (452), Expect = 6e-49
Identities = 86/130 (66%), Positives = 102/130 (78%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EA+ +ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN
Sbjct: 741 GYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRN 800
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
+ LANKL VYS K+T GFQP +HLLVPSL+KK+A+ + GHKVSTYAGCQGIT
Sbjct: 801 KRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPSLLKKSAYGEMGHKVSTYAGCQGIT 860
Query: 475 APRVQILLDN 504
AP++QILLDN
Sbjct: 861 APKIQILLDN 870
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1
Query: 123 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALIS 1
KLP GYIEA+ +ELVILTGD RQSTHHE NE+A+IS
Sbjct: 737 KLPAGYIEAYVAVQTRVELVILTGDARQSTHHENNEQAMIS 777
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 163 bits (412), Expect = 1e-43
Identities = 79/128 (61%), Positives = 98/128 (76%)
Frame = +1
Query: 115 GQLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRN 294
G +EAF + ++++L+ILTGD +QS HHE+NE A S + P SEL RYYINATHRN
Sbjct: 895 GYVEAFCLYFSTVQLIILTGDCKQSVHHESNENATTSSIEPLVKEASELCRYYINATHRN 954
Query: 295 SKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGCQGIT 474
K LANKLGVYS + +VT+G P PG+H+LVPSL KK AF++ GHKVSTYAGCQGIT
Sbjct: 955 KKDLANKLGVYSEKTGLTEVTHGTTPIPGLHMLVPSLYKKQAFSEMGHKVSTYAGCQGIT 1014
Query: 475 APRVQILL 498
AP++QILL
Sbjct: 1015 APKIQILL 1022