BLASTX nr result
ID: Rehmannia27_contig00059125
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00059125
(364 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP63926.1| Putative ribonuclease H protein At1g65750 family ... 107 3e-25
gb|KYP66685.1| hypothetical protein KK1_012990 [Cajanus cajan] 101 4e-25
gb|KHN20416.1| Putative ribonuclease H protein [Glycine soja] 103 8e-25
gb|KYP45089.1| Putative ribonuclease H protein At1g65750 family ... 105 2e-24
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 102 1e-23
gb|KYP66749.1| LINE-1 reverse transcriptase isogeny, partial [Ca... 101 1e-22
gb|KYP44134.1| Putative ribonuclease H protein At1g65750 family ... 100 1e-22
gb|KYP48325.1| hypothetical protein KK1_030017 [Cajanus cajan] 99 2e-22
gb|KHN34921.1| hypothetical protein glysoja_004687, partial [Gly... 92 3e-22
gb|KYP68845.1| Putative ribonuclease H protein At1g65750 family,... 97 3e-21
gb|KYP46236.1| Putative ribonuclease H protein At1g65750 family ... 96 5e-21
gb|KYP48455.1| hypothetical protein KK1_029830 [Cajanus cajan] 96 1e-20
gb|KYP48474.1| hypothetical protein KK1_029849 [Cajanus cajan] 95 1e-20
gb|ABO80475.1| probable reverse transcriptase At2g02650 - , rela... 89 6e-20
gb|KYP35971.1| Putative ribonuclease H protein At1g65750 family ... 93 7e-20
ref|XP_007226339.1| hypothetical protein PRUPE_ppa022315mg, part... 91 1e-19
gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanu... 92 3e-19
ref|XP_011470556.1| PREDICTED: uncharacterized protein LOC105353... 91 3e-19
gb|KYP64366.1| hypothetical protein KK1_018962, partial [Cajanus... 87 1e-18
gb|KYP64385.1| Putative ribonuclease H protein At1g65750 family,... 87 2e-18
>gb|KYP63926.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 404
Score = 107 bits (266), Expect = 3e-25
Identities = 46/119 (38%), Positives = 72/119 (60%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L+IP K+K+F+WR+ RD LPTR NL +KG+ C C++ +EN WH F SC A
Sbjct: 239 IWNLRIPHKIKHFIWRLMRDILPTRPNLQKKGIRCPSTCFRCNTDIENTWHTFFSCPSAK 298
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW+ SN+ + + +N+SD + +L+ + A+ +ILW++ RN+ W+N
Sbjct: 299 LCWQGSNLHSCILNLINSSDGVFNLISHILQHWTPQAAAEFSMILWSMWHSRNALHWSN 357
>gb|KYP66685.1| hypothetical protein KK1_012990 [Cajanus cajan]
Length = 149
Score = 101 bits (251), Expect = 4e-25
Identities = 47/118 (39%), Positives = 65/118 (55%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
++W L+IP + FLWR+ R C+PTR NL +KGV T C C + EN WH+F SC A
Sbjct: 18 KLWSLKIPHSTQIFLWRLLRGCIPTRLNLQQKGVPCTSSCPHCSANQENEWHLFYSCPAA 77
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
++ W S + H V SF D K+L + S L+LW I ++RN K+W
Sbjct: 78 LSIWIDSGCWPRIAHIVEQGISFIDTTWKLLGHLTGSDLTSFTLMLWCIWRRRNDKVW 135
>gb|KHN20416.1| Putative ribonuclease H protein [Glycine soja]
Length = 249
Score = 103 bits (256), Expect = 8e-25
Identities = 42/119 (35%), Positives = 72/119 (60%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
+W+LQ+P KVK F+WR R CLPTR L KGV T +C C + LEN WH ++C +
Sbjct: 19 LWKLQVPNKVKVFIWRAVRGCLPTRLRLQTKGVVCTGICPLCLNNLENEWHCLVACPSNL 78
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW+ + +++ V+++DSF D ++L S + +++ +++W + + N K+W +
Sbjct: 79 VCWKLAGFWNVIRVQVDSADSFDDLIFRLLARISKAKISQVVMLMWVLWWRSNGKVWED 137
>gb|KYP45089.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 406
Score = 105 bits (261), Expect = 2e-24
Identities = 42/120 (35%), Positives = 70/120 (58%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
+IW L++ +K FLWR+ R CLP+R NL ++G+ T +CA C EN WHIF C+ A
Sbjct: 185 QIWSLKVLNTMKIFLWRIARRCLPSRMNLQQRGIPRTSLCAHCSLNQENEWHIFFGCQTA 244
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
+ W + + N +++ + F D ++ + I K+ +ILW+I + RN K+W++
Sbjct: 245 ESIWMTFGLWPSTNAYIDNGEDFKDTIFSLISNLHHDIACKVIIILWSIWRNRNDKVWSD 304
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 102 bits (254), Expect = 1e-23
Identities = 45/117 (38%), Positives = 69/117 (58%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW+L++PP+VK +WRVCR+C PTR L +GV+ C C+ E+ +HIF C A+
Sbjct: 59 IWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAI 118
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
W ++N+ HL+ ++ D+ D +L+ S S I I+W+I K RN K+W
Sbjct: 119 DVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLW 175
>gb|KYP66749.1| LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
Length = 816
Score = 101 bits (251), Expect = 1e-22
Identities = 47/118 (39%), Positives = 65/118 (55%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
++W L+IP + FLWR+ R C+PTR NL +KGV T C C + EN WH+F SC A
Sbjct: 501 KLWSLKIPHSTQIFLWRLLRGCIPTRLNLQQKGVPCTSSCPHCSANQENEWHLFYSCPAA 560
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
++ W S + H V SF D K+L + S L+LW I ++RN K+W
Sbjct: 561 LSIWIDSGCWPRIAHIVEQGISFIDTTWKLLGHLTGSDLTSFTLMLWCIWRRRNDKVW 618
>gb|KYP44134.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 613
Score = 100 bits (250), Expect = 1e-22
Identities = 47/119 (39%), Positives = 67/119 (56%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L IP K+K+F+WR+ R+ LPTR NL +KG+ C CD +EN WH F SC A
Sbjct: 297 IWNLCIPHKIKHFIWRLMREILPTRPNLQKKGISCPSTCFRCDIDIENTWHTFSSCPSAK 356
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW+ S + +N+SD + +L+ + A+ LILW++ RN+ WNN
Sbjct: 357 LCWQGSKFHSRIMKLINSSDGVFNLISHILQCWAPQDVAEFSLILWSMWHSRNALHWNN 415
>gb|KYP48325.1| hypothetical protein KK1_030017 [Cajanus cajan]
Length = 346
Score = 99.0 bits (245), Expect = 2e-22
Identities = 45/119 (37%), Positives = 66/119 (55%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L I K+K+F+WR+ RD LPTR NL +KG+ C CD +EN WH F SC A
Sbjct: 77 IWNLCISHKIKHFIWRLMRDILPTRPNLQKKGISCPSTCFRCDIDIENTWHTFFSCPSAK 136
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW+ S + + +N+SD + +L+ + + +ILW++ RN+ WNN
Sbjct: 137 LCWQGSKFHYRIMKLINSSDGVFNLISHILQCWAPQDVTEFSMILWSMWHSRNALHWNN 195
>gb|KHN34921.1| hypothetical protein glysoja_004687, partial [Glycine soja]
Length = 104
Score = 92.4 bits (228), Expect = 3e-22
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Frame = -3
Query: 320 LWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAVACWRSSNMLHLVN 141
LWR+ R CLPTR NL K H+ VC C+ +EN WH+FLSCEFA + W +++ + V
Sbjct: 1 LWRLLRGCLPTRSNLRTK--HIPCVC--CEGNIENEWHLFLSCEFAQSIWVEADLWNFVE 56
Query: 140 H-WVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
W NT D F + +++ SS + AKI +ILW + K RNSK+W
Sbjct: 57 QKWSNTID-FHSFFFYLMQDSSPHVGAKIGVILWCMWKNRNSKLW 100
>gb|KYP68845.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 821
Score = 97.1 bits (240), Expect = 3e-21
Identities = 47/119 (39%), Positives = 67/119 (56%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L+IP K+K+F+WRV LPTR NL +KG+ C CD +EN WH F SC A
Sbjct: 550 IWNLRIPHKIKHFIWRVLH-ILPTRPNLQKKGISCPSTCFRCDIDIENTWHTFFSCPSAK 608
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW+ S + +N+SD + +L+ + A+I LILW++ +N+ WNN
Sbjct: 609 LCWQGSKFHSRIMKLINSSDGVFNLISHILQCWAPQDVAEISLILWSMWHSQNALHWNN 667
>gb|KYP46236.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 507
Score = 96.3 bits (238), Expect = 5e-21
Identities = 41/119 (34%), Positives = 69/119 (57%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
++W L IP +K FLWR+ RDCLP+R L +KGV T +C C++ ENNWHIF C+ A
Sbjct: 286 KLWALPIPHNMKIFLWRLLRDCLPSRQRLQQKGVPCTSLCPHCEAAQENNWHIFFGCQEA 345
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWN 6
W+++ + + ++ + + +L S S ++ + L I ++RN+K+W+
Sbjct: 346 QTVWQATGIWQHIKSLIDVGEGIVEVIFSLLGSISQSHIVEVVVTLSCIWRRRNAKVWD 404
>gb|KYP48455.1| hypothetical protein KK1_029830 [Cajanus cajan]
Length = 536
Score = 95.5 bits (236), Expect = 1e-20
Identities = 45/118 (38%), Positives = 63/118 (53%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
++W L+IP + FLWR+ R C+PT NL +KGV T C C + EN WH+F SC A
Sbjct: 346 KLWSLKIPHSTQIFLWRLLRGCIPTCLNLQQKGVSCTSSCPHCSANQENEWHLFYSCPAA 405
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
++ W S + V SF D K+L ++S L+LW I + RN K+W
Sbjct: 406 ISIWIDSGCWPRIARIVEQGISFIDTTWKLLGHLTSSDLTSFTLMLWCIWRWRNDKVW 463
>gb|KYP48474.1| hypothetical protein KK1_029849 [Cajanus cajan]
Length = 547
Score = 95.1 bits (235), Expect = 1e-20
Identities = 45/118 (38%), Positives = 62/118 (52%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
++W L+IP + FLWR+ R C+PT NL +KGV T C C + EN WH+F SC A
Sbjct: 357 KLWSLKIPHSTQIFLWRLLRGCIPTCLNLQQKGVSCTSSCPHCSANQENEWHLFYSCPAA 416
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIW 9
++ W S + V SF D K+L + S L+LW I + RN K+W
Sbjct: 417 ISIWIDSGCWPRIARIVEQGISFIDTTWKLLGHLTGSDLTSFTLMLWCIWRWRNDKVW 474
>gb|ABO80475.1| probable reverse transcriptase At2g02650 - , related [Medicago
truncatula]
Length = 169
Score = 88.6 bits (218), Expect = 6e-20
Identities = 40/120 (33%), Positives = 61/120 (50%)
Frame = -3
Query: 362 RIWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFA 183
RIW++ K + LWR+CR C+PTR L + V +C CD+ +E++WH F+ C A
Sbjct: 35 RIWKVNSHHKARNLLWRICRGCVPTRLRLQSRHVQCEVICPSCDTVVEDDWHAFVGCTVA 94
Query: 182 VACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
W + + + V T S AD+ + S I ++ +LW I RN IWN+
Sbjct: 95 CESWYWAGLSIVRQSRVGTVSSLADFVFDICRLESRDIAGRVASLLWKIWAARNDTIWND 154
>gb|KYP35971.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 606
Score = 93.2 bits (230), Expect = 7e-20
Identities = 43/119 (36%), Positives = 63/119 (52%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
+W ++ P K FLWRV R CLPTR NL R+ V T +C C + +EN WHIF C A
Sbjct: 291 LWSMKAPNTKKIFLWRVLRGCLPTRLNLQRRHVPCTMLCPTCSAGIENEWHIFFECVEAK 350
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
W +S ++ + SD ++L+ S S + ++W I ++RN +WNN
Sbjct: 351 DIWAASGFWPKISQIIADSDGIQQAIFQLLQCLSPSEALDLLCLMWGIWRKRNDILWNN 409
>ref|XP_007226339.1| hypothetical protein PRUPE_ppa022315mg, partial [Prunus persica]
gi|462423275|gb|EMJ27538.1| hypothetical protein
PRUPE_ppa022315mg, partial [Prunus persica]
Length = 307
Score = 90.9 bits (224), Expect = 1e-19
Identities = 44/119 (36%), Positives = 64/119 (53%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
+W+ +P +VK F WRV LPT+ NLARK V + C C+ +E++ HI C FA+
Sbjct: 95 LWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVESSIHILRDCPFAI 154
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
WRSS + + W N + S DW + E S+ A ++ W I + RN +WNN
Sbjct: 155 CAWRSSTLSS--SRWNNGAHSPKDWVFRCAEQLSSQDFATFLMVGWAIWEARNGLLWNN 211
>gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanus cajan]
Length = 682
Score = 91.7 bits (226), Expect = 3e-19
Identities = 43/119 (36%), Positives = 67/119 (56%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L IP KVK+ WRV ++ LPTR L +KGV C CD +E++WH C A
Sbjct: 364 IWSLPIPAKVKHHTWRVYKNILPTRAQLQKKGVSCPISCPRCDVGIESSWHALFGCYDAR 423
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
CW +SN+ ++ ++ ++ +D K+L S S A C+++W+I RN+ +W +
Sbjct: 424 ICWLASNLKDKMSSNIDQANGTSDLVNKILNLWSKSDAADFCMMMWSIWTSRNNLLWKD 482
>ref|XP_011470556.1| PREDICTED: uncharacterized protein LOC105353255 [Fragaria vesca
subsp. vesca]
Length = 623
Score = 91.3 bits (225), Expect = 3e-19
Identities = 42/119 (35%), Positives = 67/119 (56%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW ++P KV WR C + LPTR NL RKG C C+ LE+N H+FL C +A
Sbjct: 312 IWNAKVPGKVAVHTWRSCANILPTRANLLRKGYEGEMGCLMCNHILEDNMHLFLHCPYAQ 371
Query: 179 ACWRSSNMLHLVNHWVNTSDSFADWCVKMLEGSSNSIKAKICLILWNI*KQRNSKIWNN 3
W ++++ + + VN DW + ++ + + AK+ +I+W+I K RN+++W N
Sbjct: 372 ETWSTASIPNNAANHVN----LQDWLLTLVGTVTKDVFAKVLIIMWSIWKNRNTQLWEN 426
>gb|KYP64366.1| hypothetical protein KK1_018962, partial [Cajanus cajan]
Length = 253
Score = 87.0 bits (214), Expect = 1e-18
Identities = 37/80 (46%), Positives = 48/80 (60%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L IP K+K+F+WR+ RD LPTR NL +KG+ C CD +EN WH F SC A
Sbjct: 164 IWNLCIPHKIKHFIWRLMRDILPTRPNLQKKGISCPSTCFRCDIGIENTWHTFFSCPSAK 223
Query: 179 ACWRSSNMLHLVNHWVNTSD 120
CW+ S + +N+SD
Sbjct: 224 LCWQGSKFHFCIMKLINSSD 243
>gb|KYP64385.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 282
Score = 87.0 bits (214), Expect = 2e-18
Identities = 37/80 (46%), Positives = 48/80 (60%)
Frame = -3
Query: 359 IWQLQIPPKVKYFLWRVCRDCLPTRYNLARKGVHVTHVCAFCDSQLENNWHIFLSCEFAV 180
IW L IP K+K+F+WR+ RD LPTR NL +KG+ C CD +EN WH F SC A
Sbjct: 193 IWNLCIPHKIKHFIWRLMRDILPTRPNLQKKGISCPSTCFRCDIGIENTWHTFFSCPSAK 252
Query: 179 ACWRSSNMLHLVNHWVNTSD 120
CW+ S + +N+SD
Sbjct: 253 LCWQGSKFHFCIMKLINSSD 272
Database: ./nr
Posted date: Apr 8, 2016 3:30 PM
Number of letters in database: 31,038,470,784
Number of sequences in database: 84,704,028
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 84704028
Number of Hits to DB: 286,201,586,039,378
Number of extensions: 131725962
Number of successful extensions: -64957368
Number of sequences better than 1.0e-05: 27109037
Number of HSP's gapped: -160081426
Number of HSP's successfully gapped: 37511337
Length of database: 31,038,470,784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)