BLASTX nr result
ID: Rehmannia27_contig00058924
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00058924
(436 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_054138188.1| MULTISPECIES: RNA-binding protein [unclassif... 166 3e-50
ref|WP_054155800.1| RNA-binding protein [beta proteobacterium AA... 166 3e-50
ref|WP_046112977.1| RNA-binding protein [Aquincola tertiaricarbo... 164 2e-49
ref|WP_056875345.1| RNA-binding protein [Pelomonas sp. Root1444]... 164 3e-49
ref|WP_022979517.1| RNA-binding protein [Ideonella sp. B508-1] 162 7e-49
ref|WP_057297952.1| RNA-binding protein [Pelomonas sp. Root1217]... 163 7e-49
ref|WP_056191871.1| RNA-binding protein [Pelomonas sp. Root1237]... 163 8e-49
ref|WP_056266595.1| MULTISPECIES: RNA-binding protein [Pelomonas... 163 9e-49
ref|WP_009553784.1| RNA-binding protein [Burkholderiales bacteri... 162 1e-48
ref|WP_014430874.1| RNA-binding protein [Rubrivivax gelatinosus]... 162 1e-48
ref|WP_058721234.1| RNA-binding protein [Paucibacter sp. KCTC 42... 162 1e-48
ref|WP_029001629.1| RNA-binding protein [Azohydromonas australica] 162 1e-48
ref|WP_054021759.1| RNA-binding protein [Ideonella sakaiensis] g... 161 4e-48
ref|WP_047197184.1| RNA-binding protein [[Polyangium] brachyspor... 160 5e-48
ref|WP_056802802.1| MULTISPECIES: RNA-binding protein [Rhizobact... 159 2e-47
ref|WP_047592672.1| RNA-binding protein [Methylibium sp. YR605] 159 2e-47
ref|WP_052197389.1| RNA-binding protein [Methylibium sp. CF059] 159 2e-47
ref|WP_047503813.1| RNA-binding protein [Methylibium sp. CF468] 159 2e-47
ref|WP_029718398.1| RNA-binding protein [Rubrivivax benzoatilyti... 159 2e-47
gb|KNZ31259.1| RNA-binding protein [Methylibium sp. NZG] 157 8e-47
>ref|WP_054138188.1| MULTISPECIES: RNA-binding protein [unclassified Betaproteobacteria
(miscellaneous)] gi|929665197|gb|KPF48198.1| RNA-binding
protein [beta proteobacterium AAP65]
gi|929716977|gb|KPF98634.1| RNA-binding protein [beta
proteobacterium AAP121]
Length = 163
Score = 166 bits (421), Expect = 3e-50
Identities = 80/91 (87%), Positives = 87/91 (95%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SL +AFSQFGTVTSAKVMMDRETGRSKGFGFVEM SDPEAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLLQAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGSDPEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQP++GR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQPIDGRAVVVNEARPREERPGGFGG 91
>ref|WP_054155800.1| RNA-binding protein [beta proteobacterium AAP51]
gi|929658487|gb|KPF41660.1| RNA-binding protein [beta
proteobacterium AAP51]
Length = 164
Score = 166 bits (421), Expect = 3e-50
Identities = 80/91 (87%), Positives = 87/91 (95%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SL +AFSQFGTVTSAKVMMDRETGRSKGFGFVEM SDPEAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLLQAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGSDPEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQP++GR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQPIDGRAVVVNEARPREERPGGFGG 91
>ref|WP_046112977.1| RNA-binding protein [Aquincola tertiaricarbonis]
Length = 168
Score = 164 bits (415), Expect = 2e-49
Identities = 81/89 (91%), Positives = 84/89 (94%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESLH AF QFGTVTSAKVMMDRETGRSKGFGFVEM+SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDESLHSAFVQFGTVTSAKVMMDRETGRSKGFGFVEMASDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGF 79
INGMNGQ LEGR +VVNEARPREERPGGF
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGF 89
>ref|WP_056875345.1| RNA-binding protein [Pelomonas sp. Root1444]
gi|945832459|gb|KQY86200.1| RNA-binding protein
[Pelomonas sp. Root1444]
Length = 181
Score = 164 bits (416), Expect = 3e-49
Identities = 81/91 (89%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL EAF QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQEAFGQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ LEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGFGG 91
>ref|WP_022979517.1| RNA-binding protein [Ideonella sp. B508-1]
Length = 144
Score = 162 bits (410), Expect = 7e-49
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SL +AF++FG VTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLQQAFAEFGNVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQPLEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQPLEGRNIVVNEARPREERPGGFGG 91
>ref|WP_057297952.1| RNA-binding protein [Pelomonas sp. Root1217]
gi|945497717|gb|KQV53168.1| RNA-binding protein
[Pelomonas sp. Root1217]
Length = 181
Score = 163 bits (413), Expect = 7e-49
Identities = 80/91 (87%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL E+F QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQESFGQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ LEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGFGG 91
>ref|WP_056191871.1| RNA-binding protein [Pelomonas sp. Root1237]
gi|945541286|gb|KQV96504.1| RNA-binding protein
[Pelomonas sp. Root1237]
Length = 183
Score = 163 bits (413), Expect = 8e-49
Identities = 80/91 (87%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL E+F QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQESFGQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ LEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGFGG 91
>ref|WP_056266595.1| MULTISPECIES: RNA-binding protein [Pelomonas]
gi|945591504|gb|KQW46422.1| RNA-binding protein
[Pelomonas sp. Root405] gi|946020644|gb|KRA73472.1|
RNA-binding protein [Pelomonas sp. Root662]
Length = 186
Score = 163 bits (413), Expect = 9e-49
Identities = 80/91 (87%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL E+F QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQESFGQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ LEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGFGG 91
>ref|WP_009553784.1| RNA-binding protein [Burkholderiales bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing
RNA-binding protein [Burkholderiales bacterium
JOSHI_001]
Length = 167
Score = 162 bits (411), Expect = 1e-48
Identities = 80/91 (87%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL AFSQFGTVTSAKVMMDRETGRSKGFGFVEM + EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQPLEGR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQPLEGRAVVVNEARPREERPGGFGG 91
>ref|WP_014430874.1| RNA-binding protein [Rubrivivax gelatinosus]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding
protein, Glycine-rich [Rubrivivax gelatinosus IL144]
Length = 161
Score = 162 bits (410), Expect = 1e-48
Identities = 78/89 (87%), Positives = 85/89 (95%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SL +AF+QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGF 79
INGMNGQPLEGR +VVNEARPRE+RPGGF
Sbjct: 61 INGMNGQPLEGRAIVVNEARPREDRPGGF 89
>ref|WP_058721234.1| RNA-binding protein [Paucibacter sp. KCTC 42545]
gi|968575872|gb|ALT78750.1| RNA-binding protein
[Paucibacter sp. KCTC 42545]
Length = 162
Score = 162 bits (410), Expect = 1e-48
Identities = 79/91 (86%), Positives = 85/91 (93%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDESL EAFSQFG+VTSAKVMMDR+TGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQEAFSQFGSVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQTA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQDLDGRAIVVNEARPREERPGGFGG 91
>ref|WP_029001629.1| RNA-binding protein [Azohydromonas australica]
Length = 167
Score = 162 bits (410), Expect = 1e-48
Identities = 80/91 (87%), Positives = 85/91 (93%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SLHEAFSQFG+VTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLHEAFSQFGSVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ LEGR +VVNEARPREERPGG G
Sbjct: 61 INGMNGQALEGRAIVVNEARPREERPGGGYG 91
>ref|WP_054021759.1| RNA-binding protein [Ideonella sakaiensis]
gi|908204345|dbj|GAP37854.1| RNA-binding protein
[Ideonella sakaiensis]
Length = 168
Score = 161 bits (407), Expect = 4e-48
Identities = 77/91 (84%), Positives = 85/91 (93%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+ LH+AFSQFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDGLHQAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ ++GR +VVNEARPRE+RPGGF G
Sbjct: 61 INGMNGQMVDGRAVVVNEARPREDRPGGFGG 91
>ref|WP_047197184.1| RNA-binding protein [[Polyangium] brachysporum]
gi|826174004|gb|AKJ32234.1| RNA-binding protein
[[Polyangium] brachysporum]
Length = 144
Score = 160 bits (404), Expect = 5e-48
Identities = 78/91 (85%), Positives = 83/91 (91%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDE L+EAFSQ+G VTSAKVMMDR+TGRSKGFGFVEM SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDEDLNEAFSQYGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L GR +VVNEARPREERPGGF G
Sbjct: 61 INGMNGQALSGRAIVVNEARPREERPGGFGG 91
>ref|WP_056802802.1| MULTISPECIES: RNA-binding protein [Rhizobacter]
gi|945421630|gb|KQU77942.1| RNA-binding protein
[Rhizobacter sp. Root29] gi|945560625|gb|KQW15689.1|
RNA-binding protein [Rhizobacter sp. Root1238]
gi|946072214|gb|KRB24799.1| RNA-binding protein
[Rhizobacter sp. Root16D2]
Length = 162
Score = 159 bits (402), Expect = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+ L +AF+QFGTV+SAKVMMDR+TGRSKGFGFVEM SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFAQFGTVSSAKVMMDRDTGRSKGFGFVEMGSDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR LVVNEARPREERPGGF G
Sbjct: 61 INGMNGQALDGRALVVNEARPREERPGGFGG 91
>ref|WP_047592672.1| RNA-binding protein [Methylibium sp. YR605]
Length = 165
Score = 159 bits (402), Expect = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+ L +AF+QFGTV+SAKVMMDR+TGRSKGFGFVEM SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFAQFGTVSSAKVMMDRDTGRSKGFGFVEMGSDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR LVVNEARPREERPGGF G
Sbjct: 61 INGMNGQALDGRALVVNEARPREERPGGFGG 91
>ref|WP_052197389.1| RNA-binding protein [Methylibium sp. CF059]
Length = 166
Score = 159 bits (402), Expect = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+ L +AF+QFGTV+SAKVMMDR+TGRSKGFGFVEM SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFAQFGTVSSAKVMMDRDTGRSKGFGFVEMGSDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR LVVNEARPREERPGGF G
Sbjct: 61 INGMNGQALDGRALVVNEARPREERPGGFGG 91
>ref|WP_047503813.1| RNA-binding protein [Methylibium sp. CF468]
Length = 166
Score = 159 bits (402), Expect = 2e-47
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+ L +AF+QFGTV+SAKVMMDR+TGRSKGFGFVEM SD EAQSA
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFAQFGTVSSAKVMMDRDTGRSKGFGFVEMGSDAEAQSA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR LVVNEARPREERPGGF G
Sbjct: 61 INGMNGQALDGRALVVNEARPREERPGGFGG 91
>ref|WP_029718398.1| RNA-binding protein [Rubrivivax benzoatilyticus]
Length = 158
Score = 159 bits (401), Expect = 2e-47
Identities = 77/89 (86%), Positives = 84/89 (94%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRD+SL +AF+QFGTVTSAKVMMDRETGRSKGFGFVEM SD EAQ+A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGF 79
INGMNGQ LEGR +VVNEARPRE+RPGGF
Sbjct: 61 INGMNGQSLEGRAVVVNEARPREDRPGGF 89
>gb|KNZ31259.1| RNA-binding protein [Methylibium sp. NZG]
Length = 163
Score = 157 bits (398), Expect = 8e-47
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = -2
Query: 345 VGNKLYVGNLAYSVRDESLHEAFSQFGTVTSAKVMMDRETGRSKGFGFVEMSSDPEAQSA 166
+GNKLYVGNLAYSVRDE L +AF+QFG+VTSAKVMMDR+TGRSKGFGFVEM SD EAQ+
Sbjct: 1 MGNKLYVGNLAYSVRDEDLQQAFAQFGSVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAG 60
Query: 165 INGMNGQPLEGRPLVVNEARPREERPGGFSG 73
INGMNGQ L+GR LVVNEARPREERPGGF G
Sbjct: 61 INGMNGQALDGRALVVNEARPREERPGGFGG 91