BLASTX nr result
ID: Rehmannia27_contig00058841
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00058841
(456 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010668395.1| PREDICTED: uncharacterized protein LOC104885... 122 2e-29
ref|XP_013695570.1| PREDICTED: uncharacterized protein LOC106399... 121 4e-29
ref|XP_015944834.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 120 9e-29
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 119 2e-28
ref|XP_008812481.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 119 2e-28
ref|XP_010681479.1| PREDICTED: uncharacterized protein LOC104896... 119 2e-28
ref|XP_013740018.1| PREDICTED: uncharacterized protein LOC106442... 118 3e-28
gb|KYP40290.1| Retrotransposable element Tf2 [Cajanus cajan] 116 1e-27
gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor] 116 2e-27
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera] 116 2e-27
ref|XP_010026793.1| PREDICTED: uncharacterized protein LOC104417... 116 2e-27
ref|XP_010030649.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 115 3e-27
gb|KYP48051.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Ca... 115 3e-27
gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Ja... 115 3e-27
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi... 115 4e-27
gb|KYP45025.1| Retrotransposable element Tf2 [Cajanus cajan] 109 4e-27
gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Ja... 115 5e-27
gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subc... 115 5e-27
gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subc... 114 7e-27
gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-... 114 7e-27
>ref|XP_010668395.1| PREDICTED: uncharacterized protein LOC104885396, partial [Beta
vulgaris subsp. vulgaris]
Length = 1044
Score = 122 bits (305), Expect = 2e-29
Identities = 56/108 (51%), Positives = 78/108 (72%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F+ ++C N+E L+ KIL EA +S +S+HPG NK++KDLKQ FWW NMK+ +RC
Sbjct: 937 FQGRLCVPNNESLKRKILEEAH-NSPFSVHPGGNKLYKDLKQTFWWSNMKQEVAEFVSRC 995
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSL 325
LTCQR+K+EHQRP+GLL PL +P KW+ I+MDF GL + + +S+
Sbjct: 996 LTCQRIKIEHQRPAGLLQPLDVPTWKWDSISMDFIMGLPPSSRSMNSI 1043
>ref|XP_013695570.1| PREDICTED: uncharacterized protein LOC106399662 [Brassica napus]
Length = 1869
Score = 121 bits (303), Expect = 4e-29
Identities = 63/134 (47%), Positives = 85/134 (63%), Gaps = 14/134 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
++N+VC NDE+L+ +IL +A HSR+SIHPG+ KM+KDLK+++ W MK+ ++C
Sbjct: 1426 YRNRVCVPNDELLKKEILQQAH-HSRFSIHPGNTKMYKDLKRYYHWPGMKRDVASFISQC 1484
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T--------------HKITH 319
TCQ VK EHQ PSGLL L +PE KW+ +TMDF GL T K +H
Sbjct: 1485 QTCQMVKAEHQVPSGLLQNLPLPEWKWDMVTMDFVTGLPTTLGGKNAIWVIVDRLTKSSH 1544
Query: 320 SLSIKKTDSLQKLA 361
L+IKKTD +LA
Sbjct: 1545 FLTIKKTDRADQLA 1558
>ref|XP_015944834.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107469968
[Arachis duranensis]
Length = 1201
Score = 120 bits (300), Expect = 9e-29
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 14/134 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
+KN++C + LR +IL EA Q SR+S+HPG KM++DLKQ FWW +KK ++C
Sbjct: 734 YKNRICVPSSGDLRQRILAEAHQ-SRFSMHPGVTKMYQDLKQMFWWPGLKKDVADYVSKC 792
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
LTCQ+VKVEHQ+PSG L PL+IP+ KWE ITMDF GL T K H
Sbjct: 793 LTCQKVKVEHQKPSGTLQPLEIPQWKWEQITMDFVMGLPRTSTGHDAIWVIVDMLTKSAH 852
Query: 320 SLSIKKTDSLQKLA 361
L I+ +L++LA
Sbjct: 853 FLPIRVDYTLERLA 866
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 119 bits (297), Expect = 2e-28
Identities = 65/138 (47%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F N++C N + L+ IL EA + S YSIHPG KM++DLK+ +WWV+MK+ A C
Sbjct: 615 FGNRICVPNQQELKQSILKEAHE-SPYSIHPGSTKMYQDLKEKYWWVSMKREIAEFVAHC 673
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
CQRVK EHQRP+GLL PL IPE KWE I MDF GL T K+ H
Sbjct: 674 DICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRLTKVAH 733
Query: 320 SLSIKKTDSLQKLAIDLY 373
+ +K T KLA +LY
Sbjct: 734 FIPVKTTYQSSKLA-ELY 750
>ref|XP_008812481.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723366
[Phoenix dactylifera]
Length = 1246
Score = 119 bits (297), Expect = 2e-28
Identities = 66/134 (49%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F ++C D L+ +IL EA Q SR+SIHPG KM+ DL++HFWW MK+ ARC
Sbjct: 854 FGCRLCVPKDADLKREILEEAHQ-SRFSIHPGSTKMYTDLREHFWWNGMKREIAGFVARC 912
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T--------------HKITH 319
L CQ+VK EHQRP+GLL PL+IPE KWE ITMDF GL T K H
Sbjct: 913 LVCQQVKAEHQRPAGLLEPLEIPEWKWEHITMDFVIGLPRTVRRNDAVWVIVDRLTKSAH 972
Query: 320 SLSIKKTDSLQKLA 361
L + SL KLA
Sbjct: 973 FLPFRVGTSLDKLA 986
>ref|XP_010681479.1| PREDICTED: uncharacterized protein LOC104896426 [Beta vulgaris subsp.
vulgaris]
Length = 1322
Score = 119 bits (297), Expect = 2e-28
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 14/138 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F+ + C + E L+ +IL EA + Y IHPG NK++KDLKQ FWW NMK+ +RC
Sbjct: 925 FQGRTCVPDKEALKKRILEEAHNNPFY-IHPGGNKLYKDLKQTFWWSNMKQEVAEFVSRC 983
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
LTCQR+K+EHQRP+GLL PL +P KW+ I+MDF GL + K H
Sbjct: 984 LTCQRIKIEHQRPAGLLQPLDVPAWKWDSISMDFIMGLPPSFRGMNSIWVIVDRLTKSAH 1043
Query: 320 SLSIKKTDSLQKLAIDLY 373
L I+ SL KLA +LY
Sbjct: 1044 FLGIRNNWSLDKLA-ELY 1060
>ref|XP_013740018.1| PREDICTED: uncharacterized protein LOC106442945 [Brassica napus]
Length = 1013
Score = 118 bits (296), Expect = 3e-28
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 14/134 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
++N+VC NDE+LR +IL +A HS +SIHPG+ KM++DLK+++ W MK+ ++C
Sbjct: 859 YRNRVCVPNDELLRKEILRQAH-HSSFSIHPGNTKMYRDLKRYYHWPGMKRDVASFVSQC 917
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
TCQ VK EHQ PSGLL L +PE KW+ +TMDF GL T K H
Sbjct: 918 QTCQMVKAEHQVPSGLLQNLPLPEWKWDMVTMDFVTGLPTTSGGKNAIWVIVDRLTKSAH 977
Query: 320 SLSIKKTDSLQKLA 361
L++KKTD +LA
Sbjct: 978 FLAVKKTDRADQLA 991
>gb|KYP40290.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 831
Score = 116 bits (291), Expect = 1e-27
Identities = 64/141 (45%), Positives = 84/141 (59%), Gaps = 14/141 (9%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F +++C ND ++ ILGEA + S+ SIHPG KM++DLK+ FWW MKK + A C
Sbjct: 233 FNDRICVPNDSEIKKTILGEAHK-SKLSIHPGATKMYQDLKKMFWWPKMKKEIAQYVATC 291
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T--------------HKITH 319
L CQ+ K+EHQ+P+G+L PL IPE KW+ I MDF GL T K H
Sbjct: 292 LICQKAKIEHQKPAGMLQPLDIPEWKWDSIAMDFVVGLPRTTHKFDSIWVIVDRLTKFAH 351
Query: 320 SLSIKKTDSLQKLAIDLYPRD 382
L I SL+KL I+LY R+
Sbjct: 352 FLPINIRYSLEKL-IELYIRE 371
>gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
Length = 924
Score = 116 bits (290), Expect = 2e-27
Identities = 64/137 (46%), Positives = 82/137 (59%), Gaps = 14/137 (10%)
Frame = +2
Query: 5 KNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCL 184
KN++C +DE LR +IL EA SRY IHPG KM+ DL++ FWW +M+K ARC
Sbjct: 485 KNRICVPSDEPLREEILSEAHD-SRYCIHPGSTKMYADLRKVFWWKDMRKDIAGHVARCD 543
Query: 185 TCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T--------------HKITHS 322
TC RVK EHQRP+GLL PL +PE KWE I+MDF GL + K+ H
Sbjct: 544 TCNRVKAEHQRPAGLLKPLDVPEWKWEGISMDFIVGLPRSPKGHDSIWVIVDRLTKVAHF 603
Query: 323 LSIKKTDSLQKLAIDLY 373
+ +K ++LA DLY
Sbjct: 604 IPVKTVYRTEQLA-DLY 619
>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
Length = 1313
Score = 116 bits (290), Expect = 2e-27
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 14/134 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
FK ++C D LRN++L +A + ++Y+IHPG+ KM++DLK+ FWW MK+ + A
Sbjct: 876 FKGRLCVPKDVELRNELLADAHR-AKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFVANF 934
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
CQ+VK EHQRP+GLL PL IPE KW+ ITMDF GL T K H
Sbjct: 935 QICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPRTRSKKNGVWVIVDCLTKSAH 994
Query: 320 SLSIKKTDSLQKLA 361
L++K TDS+ LA
Sbjct: 995 FLAMKTTDSMNSLA 1008
>ref|XP_010026793.1| PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]
Length = 1753
Score = 116 bits (290), Expect = 2e-27
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 14/140 (10%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F+ ++ +D LR +IL EA + S YSIHPG KM+++L+QH+WW MK + A+C
Sbjct: 1059 FQGRLVVPDDVELREEILSEAHR-SNYSIHPGSTKMYQNLRQHYWWCGMKADIAKHVAKC 1117
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITH 319
LTCQ+VK +H +P GLL PL+IPE KWE ITMDF GL + K H
Sbjct: 1118 LTCQQVKAQHCKPGGLLRPLEIPEWKWEHITMDFVTGLPRSQRGNDSIWVVVDRLTKSAH 1177
Query: 320 SLSIKKTDSLQKLAIDLYPR 379
+++++ SL +LA DLY R
Sbjct: 1178 FIAVRRDLSLDRLA-DLYVR 1196
>ref|XP_010030649.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104420520 [Eucalyptus grandis]
Length = 945
Score = 115 bits (289), Expect = 3e-27
Identities = 51/98 (52%), Positives = 71/98 (72%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F+ ++C ND L+ +IL EA +R+SIHPG KM++DL+ +FWW+NMKK + +C
Sbjct: 376 FRGRLCVPNDSELKKEILQEAHS-TRFSIHPGSTKMYRDLRGNFWWINMKKDIVKFVDQC 434
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGL 295
L CQ+VK+EHQ+P G L PL++P+ KWE ITMDF GL
Sbjct: 435 LVCQQVKIEHQKPGGQLHPLEVPKWKWEHITMDFIVGL 472
>gb|KYP48051.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 1049
Score = 115 bits (289), Expect = 3e-27
Identities = 65/141 (46%), Positives = 84/141 (59%), Gaps = 14/141 (9%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F N++C ND ++ ILGEA + S+ SIHPG KM++DLK+ FWW MKK + A C
Sbjct: 658 FNNRICVPNDSEIKKIILGEAHK-SKLSIHPGATKMYQDLKRMFWWPKMKKEIAQYVATC 716
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T-HKI-------------TH 319
L CQ+ K+EHQ+P+G+L PL IPE KW+ I MDF GL T HK H
Sbjct: 717 LICQKAKIEHQKPAGMLQPLDIPEWKWDSIAMDFVVGLPRTIHKFDSIWVIVDRLTKSAH 776
Query: 320 SLSIKKTDSLQKLAIDLYPRD 382
L I SL+KL +LY R+
Sbjct: 777 FLPINIRYSLEKLT-ELYIRE 796
>gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431025|gb|AAP52863.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1714
Score = 115 bits (289), Expect = 3e-27
Identities = 61/117 (52%), Positives = 77/117 (65%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
++C ND+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+M++ A C C
Sbjct: 1271 RLCVPNDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1329
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLSIKKTDSLQKLA 361
QRVK EHQRP+GLL PLQIPE KWE I MDF GL T + H D L K+A
Sbjct: 1330 QRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRT-SLGHDSIWVVVDRLTKVA 1385
>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 115 bits (288), Expect = 4e-27
Identities = 62/117 (52%), Positives = 75/117 (64%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
+VC ND L+ +IL EA Q S++SIHPG NKM++DLK+++ WV MKK R A+C TC
Sbjct: 1150 RVCVPNDRALKEEILREAHQ-SKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVAKCPTC 1208
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLSIKKTDSLQKLA 361
Q VK EHQ PSGLL L IPE KW+ ITMDF GL K H+ D L K A
Sbjct: 1209 QLVKAEHQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSA 1265
>gb|KYP45025.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 227
Score = 109 bits (273), Expect = 4e-27
Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 14/141 (9%)
Frame = +2
Query: 2 FKNQVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARC 181
F +++ ND ++ ILGEA + S+ SIHPG KM++DLK+ FWW MKK + A C
Sbjct: 87 FNDRIYVPNDSEIKKIILGEAHK-SKLSIHPGATKMYQDLKRMFWWPKMKKEIAQYVATC 145
Query: 182 LTCQRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*T-HKI-------------TH 319
L CQ+ K+EHQ+P+G+L PL IPE KW+ I MDF GL T HK H
Sbjct: 146 LICQKAKIEHQKPTGMLQPLNIPEWKWDSIAMDFVVGLPRTIHKFDSIWVIVDRLTKSAH 205
Query: 320 SLSIKKTDSLQKLAIDLYPRD 382
L I SL+KL +LY R+
Sbjct: 206 FLPINIRYSLEKLT-ELYIRE 225
>gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 1512
Score = 115 bits (287), Expect = 5e-27
Identities = 61/117 (52%), Positives = 77/117 (65%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+M++ A C C
Sbjct: 1069 RLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1127
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLSIKKTDSLQKLA 361
QRVK EHQRP+GLL PLQIPE KWE I MDF GL T H L D L K+A
Sbjct: 1128 QRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSS-GHDLIWVVVDRLTKVA 1183
>gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 115 bits (287), Expect = 5e-27
Identities = 61/117 (52%), Positives = 77/117 (65%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
++C +D+ L++ IL EA Q ++YSIHPG KM++DLK+ FWWV+M++ A C C
Sbjct: 1079 RLCVPDDKELKDLILTEAHQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1137
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLSIKKTDSLQKLA 361
QRVK EHQRP+GLL PLQIPE KWE I MDF GL T H L D L K+A
Sbjct: 1138 QRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSS-GHDLIWVVVDRLTKVA 1193
>gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 114 bits (286), Expect = 7e-27
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 14/135 (10%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
++C ++ L++ IL EA Q +RYSIHPG KM++DLK+ FWWV+M++ A C C
Sbjct: 1112 RLCVPENKELKDLILTEAHQ-TRYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1170
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*TH--------------KITHSLS 328
QRVK EHQRP+GLL PLQIPE KWE I MDF GL T K+ H +
Sbjct: 1171 QRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSRHDSIWVVVDRLTKVAHFIP 1230
Query: 329 IKKTDSLQKLAIDLY 373
+ T S +KLA +LY
Sbjct: 1231 VHTTYSGKKLA-ELY 1244
>gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549773|gb|ABA92570.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1723
Score = 114 bits (286), Expect = 7e-27
Identities = 60/117 (51%), Positives = 78/117 (66%)
Frame = +2
Query: 11 QVCATNDEVLRNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTC 190
++C +D+ L++ IL EA H++YSIHPG KM++DLK+ FWWV+M++ A C C
Sbjct: 1280 RLCVPDDKELKDLILTEAH-HTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVC 1338
Query: 191 QRVKVEHQRPSGLL*PLQIPERKWEFITMDFSNGLA*THKITHSLSIKKTDSLQKLA 361
QRVK EHQRP+GLL PLQIPE KWE I MDF GL T S+ + D L K+A
Sbjct: 1339 QRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWV-VVDRLTKVA 1394