BLASTX nr result

ID: Rehmannia27_contig00058773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00058773
         (472 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB33199.1| hypothetical protein Lcho_0927 [Leptothrix cholod...    54   6e-07
ref|WP_043703857.1| hypothetical protein [Leptothrix cholodnii]        54   6e-07

>gb|ACB33199.1| hypothetical protein Lcho_0927 [Leptothrix cholodnii SP-6]
          Length = 84

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +3

Query: 84  SGAFLQLMSGLFGSRPAARPVGSSERLRVREANEVRELARSVEMQSPGFAADLYAAALRH 263
           + AFL+L+     SR +      S   R  EA  VRE+ARS+E   PGFAADLYAAA RH
Sbjct: 24  AAAFLRLIDAFDFSRKSGAVQRDS---RAEEAESVREMARSIEASDPGFAADLYAAANRH 80

Query: 264 E 266
           E
Sbjct: 81  E 81


>ref|WP_043703857.1| hypothetical protein [Leptothrix cholodnii]
          Length = 85

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +3

Query: 84  SGAFLQLMSGLFGSRPAARPVGSSERLRVREANEVRELARSVEMQSPGFAADLYAAALRH 263
           + AFL+L+     SR +      S   R  EA  VRE+ARS+E   PGFAADLYAAA RH
Sbjct: 25  AAAFLRLIDAFDFSRKSGAVQRDS---RAEEAESVREMARSIEASDPGFAADLYAAANRH 81

Query: 264 E 266
           E
Sbjct: 82  E 82


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