BLASTX nr result

ID: Rehmannia27_contig00058582 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00058582
         (488 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008382208.1| PREDICTED: uncharacterized protein LOC103445...    61   5e-08
ref|XP_008348412.1| PREDICTED: uncharacterized protein LOC103411...    60   1e-07
ref|XP_008218516.1| PREDICTED: uncharacterized protein LOC103318...    60   1e-07
ref|XP_008358577.1| PREDICTED: uncharacterized protein LOC103422...    58   6e-07
gb|KYP34222.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
gb|KYP58959.1| hypothetical protein KK1_014383 [Cajanus cajan]         56   2e-06
gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposo...    55   7e-06

>ref|XP_008382208.1| PREDICTED: uncharacterized protein LOC103445017 [Malus domestica]
          Length = 536

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
 Frame = -2

Query: 451 KGKPECQNSENFGHREKPCCLDNHLCHIRRK*-----RYLYVC----------------- 338
           KGK +C     FGH  K C     + +  ++         Y C                 
Sbjct: 186 KGKAKCGRCNRFGHLTKDCDNGKQVANYAKEEDAVTATMFYACHASSIASSKSVWFVDSA 245

Query: 337 --NHVTKDESIFCRLDK-INTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVP 176
             NH+T  E +   LDK +  K+K+G    ++AT  GT+ ++T KG+RYINEVLLVP
Sbjct: 246 CSNHMTSQEFVLINLDKSVTCKVKMGFGYLVQATGKGTLVVETRKGRRYINEVLLVP 302


>ref|XP_008348412.1| PREDICTED: uncharacterized protein LOC103411561 [Malus domestica]
          Length = 454

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
 Frame = -2

Query: 454 VKGKPECQNSENFGHREKPCCLDNHLCHIRRK*-----RYLYVC---------------- 338
           ++ K +C     FGH  K C     + +  ++         Y C                
Sbjct: 280 IQRKAKCGRCNRFGHLTKDCDNGKQVANCAKEEDAVTATMFYACRASSIASSKSVWFVDS 339

Query: 337 ---NHVTKDESIFCRLDK-INTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVP 176
              NH+T  ES+   LDK +  K+K+G    ++AT  GT+ I+T +GKRYINEVLLVP
Sbjct: 340 ACSNHMTSQESLLINLDKSVTCKVKMGTGDLVQATGKGTLVIETRRGKRYINEVLLVP 397


>ref|XP_008218516.1| PREDICTED: uncharacterized protein LOC103318860 [Prunus mume]
          Length = 544

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
 Frame = -2

Query: 451 KGKPECQNSENFGHREKPCC-----LDNHLCHIRRK*RYLYVC----------------- 338
           KGKP+C   E FGH  K C        ++  H+  +    Y C                 
Sbjct: 285 KGKPKCYKCERFGHLAKDCNGKTPQAAHYAKHMEEEGTMFYACHAAFVIKNNSVWYVDSA 344

Query: 337 --NHVTKDESIFCRLD-KINTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVP 176
             NH+T  ES+   +D  +  K+K+G    ++AT  GT+ I+T  G R+I EV+LVP
Sbjct: 345 CSNHMTSHESLLIDIDTNVTAKVKMGTGDLVQATGKGTLVIETKSGPRHIKEVMLVP 401


>ref|XP_008358577.1| PREDICTED: uncharacterized protein LOC103422304 [Malus domestica]
          Length = 416

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 25/117 (21%)
 Frame = -2

Query: 451 KGKPECQNSENFGHREKPCCLDNHLCHIRRK-----*RYLYVC----------------- 338
           KGKP+C     FGH  K C     + +  ++         Y C                 
Sbjct: 185 KGKPKCGRCSRFGHLSKDCDNGKQVANCAKEEDAVTGTMFYACHASSIASSKSVWFVDNA 244

Query: 337 --NHVTKDESIFCRLDK-INTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVP 176
             NH+T  ES+   LDK +  K+K+G    ++AT   T+ ++T K + YINEVLLVP
Sbjct: 245 CSNHMTSQESLLINLDKSVTCKVKMGTGDLVQATGKXTLVVETRKRRIYINEVLLVP 301


>gb|KYP34222.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 136

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = -2

Query: 487 AKEKSRVKRLLVKGKPECQNSENFGHREKPCCLDNHLCHIRRK*RYLYVCNHVTKDESIF 308
           A+E ++ +RL    +  C N +   + +  C                   NH+ KD+SIF
Sbjct: 25  AEEHNQEQRLFYANQESCDNGDGSWYLDSGCS------------------NHMAKDQSIF 66

Query: 307 CRLDK-INTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVPTI 170
             +D  +  K+++G+D  +E+   GT+ ++T KG R I +VLLVP +
Sbjct: 67  VDIDNSMKVKVRLGNDTMVESQGKGTVMVETKKGTRLIKDVLLVPNL 113


>gb|KYP58959.1| hypothetical protein KK1_014383 [Cajanus cajan]
          Length = 268

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
 Frame = -2

Query: 487 AKEKSRVKRLLVKGKPECQNSENFGHREKPCCLDNHLCHIRRK*RYLYVCNHVTKDESIF 308
           A+E ++ +RL    +  C N +   + +  C                   NH+ KD+SIF
Sbjct: 132 AEEHNQEQRLFYANQESCDNGDGSWYLDSGCS------------------NHMAKDQSIF 173

Query: 307 CRLDK-INTKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVPTI 170
             +D  I  K+++G+   ME+   GT+ +DT KG R I +VLLVP +
Sbjct: 174 VDIDNSIKVKVQLGNGTMMESQGKGTVMVDTKKGTRLIKDVLLVPNL 220


>gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 558

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = -2

Query: 448 GKPECQNSENFGHREKPCCLDN-HLCHIRRK*RYLYV---CN-HVTKDESIFCRLDK-IN 287
           GKP C      GH EK C   N H  +   +    Y+   CN H+ KD+SIF  +D  + 
Sbjct: 192 GKPICHYCNKSGHVEKYCRNKNKHQENFAEEQESWYLDNGCNNHMAKDQSIFKDIDNSVK 251

Query: 286 TKIKVGHDGYMEATC*GTMTIDTTKGKRYINEVLLVPTI 170
            K+++G+D  +E+    T+ ++T KG R I ++LLVP +
Sbjct: 252 VKVRLGNDTMVESQGKCTVMVETKKGMRLIKDILLVPNL 290


Top