BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00058383
         (385 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]           209   2e-60
gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]           206   2e-59
gb|AKN59247.1| polyprotein [Lychnis mottle virus]                     192   1e-54
ref|YP_227369.1| protease cofactor [Strawberry latent ringspot v...   167   4e-46
ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot...   167   1e-45

>gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]
          Length = 2205

 Score =  209 bits (532), Expect = 2e-60
 Identities = 96/128 (75%), Positives = 109/128 (85%)
 Frame = -1

Query: 385 EEALFEGFEVFYPPFVDAEMQKSVTTPEPLSPTCVLDSAGSYFPGTKWVYDSDEEDYIPI 206
           EEAL E FE+F+P    A+    V  P PLSPT VLDSA SY PGTKWVYDSDEED+IP+
Sbjct: 256 EEALSEEFEIFFPFLESAK----VCEPAPLSPTSVLDSADSYLPGTKWVYDSDEEDHIPV 311

Query: 205 APVDQFYNKRFDLDFEDYCDTEYQKQPAGSIYTETWFLDGCLPGPWFKRGASLDEAIICE 26
           AP+D+F+NK+FDLDFEDYCDTEY +QPA ++YTETWF+DGCLPGPWFKRG SLDEAIICE
Sbjct: 312 APIDRFHNKKFDLDFEDYCDTEYLEQPAETVYTETWFIDGCLPGPWFKRGVSLDEAIICE 371

Query: 25  KLPLIGKS 2
           KLPLIGKS
Sbjct: 372 KLPLIGKS 379


>gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]
          Length = 2209

 Score =  206 bits (524), Expect = 2e-59
 Identities = 93/128 (72%), Positives = 106/128 (82%)
 Frame = -1

Query: 385 EEALFEGFEVFYPPFVDAEMQKSVTTPEPLSPTCVLDSAGSYFPGTKWVYDSDEEDYIPI 206
           EEAL EGFE+F+PP    E  KS     P SPTCVLDSA SY  GTKWVYDSDEE+Y+P+
Sbjct: 256 EEALTEGFELFFPPHNGVETLKSSLGSGPSSPTCVLDSADSYLSGTKWVYDSDEEEYVPV 315

Query: 205 APVDQFYNKRFDLDFEDYCDTEYQKQPAGSIYTETWFLDGCLPGPWFKRGASLDEAIICE 26
           APVDQF+NK+F+LDF DYCD EY +QP GS+ TETWF+DGCLPGPWFKRGA +DEA+ICE
Sbjct: 316 APVDQFHNKKFNLDFIDYCDLEYIEQPVGSLRTETWFIDGCLPGPWFKRGALIDEAVICE 375

Query: 25  KLPLIGKS 2
           KLPLIGKS
Sbjct: 376 KLPLIGKS 383


>gb|AKN59247.1| polyprotein [Lychnis mottle virus]
          Length = 2260

 Score =  192 bits (488), Expect = 1e-54
 Identities = 87/128 (67%), Positives = 104/128 (81%)
 Frame = -1

Query: 385 EEALFEGFEVFYPPFVDAEMQKSVTTPEPLSPTCVLDSAGSYFPGTKWVYDSDEEDYIPI 206
           EEAL E F +++PP    +  +S+   E LSPTCVLDSA SY PGTKWVYDSDEEDY+P 
Sbjct: 307 EEALIEEFALYFPPHDRVKDTESLLGSESLSPTCVLDSADSYPPGTKWVYDSDEEDYVPT 366

Query: 205 APVDQFYNKRFDLDFEDYCDTEYQKQPAGSIYTETWFLDGCLPGPWFKRGASLDEAIICE 26
           APVD+F+NK+F+LDF DYCD E  +QPA +IYTETWF+DGCLPG WFKRG  +DEA++CE
Sbjct: 367 APVDRFHNKKFNLDFIDYCDMECVEQPAENIYTETWFIDGCLPGFWFKRGTPIDEAVVCE 426

Query: 25  KLPLIGKS 2
           KLPLIGKS
Sbjct: 427 KLPLIGKS 434


>ref|YP_227369.1| protease cofactor [Strawberry latent ringspot virus]
          Length = 719

 Score =  167 bits (423), Expect = 4e-46
 Identities = 69/100 (69%), Positives = 87/100 (87%)
 Frame = -1

Query: 301 PLSPTCVLDSAGSYFPGTKWVYDSDEEDYIPIAPVDQFYNKRFDLDFEDYCDTEYQKQPA 122
           P+SP  VL SA SY  GTKW YDS++EDY+P+AP+D+F+NK+ D+DF D CDTEYQ QP+
Sbjct: 301 PISPDTVLQSANSYLSGTKWCYDSEDEDYLPVAPLDKFHNKKHDIDFVDCCDTEYQIQPS 360

Query: 121 GSIYTETWFLDGCLPGPWFKRGASLDEAIICEKLPLIGKS 2
           G+IYTETWF+DGCLPG WFKRG ++DEA++CEKLPLIGK+
Sbjct: 361 GTIYTETWFIDGCLPGCWFKRGVAIDEAVVCEKLPLIGKT 400


>ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot virus]
           gi|58040997|gb|AAW63128.1| 250 kDa polyprotein
           [Strawberry latent ringspot virus]
          Length = 2227

 Score =  167 bits (423), Expect = 1e-45
 Identities = 69/100 (69%), Positives = 87/100 (87%)
 Frame = -1

Query: 301 PLSPTCVLDSAGSYFPGTKWVYDSDEEDYIPIAPVDQFYNKRFDLDFEDYCDTEYQKQPA 122
           P+SP  VL SA SY  GTKW YDS++EDY+P+AP+D+F+NK+ D+DF D CDTEYQ QP+
Sbjct: 301 PISPDTVLQSANSYLSGTKWCYDSEDEDYLPVAPLDKFHNKKHDIDFVDCCDTEYQIQPS 360

Query: 121 GSIYTETWFLDGCLPGPWFKRGASLDEAIICEKLPLIGKS 2
           G+IYTETWF+DGCLPG WFKRG ++DEA++CEKLPLIGK+
Sbjct: 361 GTIYTETWFIDGCLPGCWFKRGVAIDEAVVCEKLPLIGKT 400