BLASTX nr result
ID: Rehmannia27_contig00058376
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00058376
(567 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09717.1| unnamed protein product [Coffea canephora] 126 1e-30
emb|CDP14369.1| unnamed protein product [Coffea canephora] 108 6e-25
emb|CDP00431.1| unnamed protein product [Coffea canephora] 103 3e-23
ref|XP_013649395.1| PREDICTED: uncharacterized protein LOC106354... 92 2e-18
ref|XP_013726953.1| PREDICTED: uncharacterized protein LOC106430... 92 2e-18
emb|CDP14470.1| unnamed protein product [Coffea canephora] 92 2e-18
ref|XP_013624458.1| PREDICTED: uncharacterized protein LOC106330... 88 4e-17
ref|XP_013720024.1| PREDICTED: uncharacterized protein LOC106423... 86 7e-17
ref|XP_009117187.1| PREDICTED: uncharacterized protein LOC103842... 86 1e-16
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 86 2e-16
ref|XP_013668927.1| PREDICTED: uncharacterized protein LOC106373... 86 2e-16
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 86 2e-16
ref|XP_009138597.1| PREDICTED: putative ribonuclease H protein A... 86 3e-16
ref|XP_010431723.1| PREDICTED: uncharacterized protein LOC104716... 85 4e-16
ref|XP_013660781.1| PREDICTED: uncharacterized protein LOC106365... 85 5e-16
ref|XP_010430818.1| PREDICTED: uncharacterized protein LOC104715... 84 5e-16
ref|XP_010446251.1| PREDICTED: uncharacterized protein LOC104729... 85 6e-16
ref|XP_013589172.1| PREDICTED: uncharacterized protein LOC106297... 85 7e-16
ref|XP_013632378.1| PREDICTED: uncharacterized protein LOC106337... 83 8e-16
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 84 1e-15
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 126 bits (317), Expect = 1e-30
Identities = 56/132 (42%), Positives = 80/132 (60%)
Frame = -3
Query: 565 NKLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAP 386
+K+KHF+W+ LN +P L+ KR + DP C CG++ E+IEHLFFQC RAQ +WK+AP
Sbjct: 311 SKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQEVWKMAP 370
Query: 385 VHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECW 206
+ W I WW + + ++ +EL+V ILW +WK RN W F+ R W
Sbjct: 371 IQWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKFNAKRRHPW 430
Query: 205 EVVRAAVHEWQE 170
E ++ A+ EWQE
Sbjct: 431 ESIKKALQEWQE 442
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 108 bits (269), Expect = 6e-25
Identities = 50/133 (37%), Positives = 74/133 (55%)
Frame = -3
Query: 565 NKLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAP 386
+KLKHF+WK L +P ++ +R + D C CG+ ETIEHL F C+ A IWK+AP
Sbjct: 26 HKLKHFIWKCLQGILPVNAVIRERCSKGDSVCKCCGEYPETIEHLLFFCDNALAIWKVAP 85
Query: 385 VHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECW 206
V W +WW+ + + + Q+R+EL+V +LW +WK+RN F +
Sbjct: 86 VSWAGLECLRNNFGHWWEEIREARAMESGQERIELTVNVLWQIWKSRNRRQFEDKGMDPM 145
Query: 205 EVVRAAVHEWQEY 167
VV A EW+E+
Sbjct: 146 TVVNKATREWREF 158
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 103 bits (257), Expect = 3e-23
Identities = 45/133 (33%), Positives = 70/133 (52%)
Frame = -3
Query: 565 NKLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAP 386
+K+K F+W+ + N + + +R + P C CGD +ETIEH+ F C +AQ +WK+AP
Sbjct: 193 HKIKLFIWRCITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAP 252
Query: 385 VHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECW 206
+ W + C K WW + + + + L+ +LW LWK RN F E
Sbjct: 253 IQWDGIQNQTGCFKKWWAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGL 312
Query: 205 EVVRAAVHEWQEY 167
++V+ A EW EY
Sbjct: 313 KIVQKASSEWMEY 325
>ref|XP_013649395.1| PREDICTED: uncharacterized protein LOC106354086 [Brassica napus]
Length = 1120
Score = 92.0 bits (227), Expect = 2e-18
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K++ FLWKVL+ IP L+ KRGM++D RC +CG E ETI+H+ FQC A+ +W ++ +
Sbjct: 802 KIRIFLWKVLSEAIPVADLILKRGMKVDERCQLCGLEGETIQHVLFQCAVARQVWALSGI 861
Query: 382 ----------HWFNTLSTDFCIKNWWQHVCDVKRDSF-AQDRMELSVYILWWLWKTRNIW 236
H F+ ++ ++ ++K S+ + + ++LW+LWK+RN +
Sbjct: 862 PQPMFEMQEGHLFSNIN----------YLMNLKAQSWGSMEEKRAWPWVLWFLWKSRNDF 911
Query: 235 IFHKTRWECWEVVRAAVHE 179
IF+ RW E+V A +E
Sbjct: 912 IFNGARWMPMEIVVKAKNE 930
>ref|XP_013726953.1| PREDICTED: uncharacterized protein LOC106430709 [Brassica napus]
Length = 1799
Score = 92.0 bits (227), Expect = 2e-18
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K++ FLWKVL+ IP L+ KRGM++D RC +CG E ETI+H+ FQC A+ +W ++ +
Sbjct: 1481 KIRIFLWKVLSEAIPVADLILKRGMKVDERCQLCGLEGETIQHVLFQCAVARQVWALSGI 1540
Query: 382 ----------HWFNTLSTDFCIKNWWQHVCDVKRDSF-AQDRMELSVYILWWLWKTRNIW 236
H F+ ++ ++ ++K S+ + + ++LW+LWK+RN +
Sbjct: 1541 PQPMFEMQEGHLFSNIN----------YLMNLKAQSWGSMEEKRAWPWVLWFLWKSRNDF 1590
Query: 235 IFHKTRWECWEVVRAAVHE 179
IF+ RW E+V A +E
Sbjct: 1591 IFNGARWMPMEIVVKAKNE 1609
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 91.7 bits (226), Expect = 2e-18
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = -3
Query: 565 NKLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAP 386
+K+K F+WK + +P + ++ DP C +CG++ ET+EHL C+ +Q +WK AP
Sbjct: 356 HKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVWKAAP 415
Query: 385 VHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIF-HKTRWEC 209
+ W + + WW + + + + + L+ ILW LWK RN F +KT
Sbjct: 416 IQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFENKTSCSP 475
Query: 208 WEVVRAAVHEWQE 170
+ A EW E
Sbjct: 476 ARTIGKAQKEWLE 488
>ref|XP_013624458.1| PREDICTED: uncharacterized protein LOC106330555 [Brassica oleracea
var. oleracea]
Length = 910
Score = 88.2 bits (217), Expect = 4e-17
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
+LK F W+V +NC+ + + KRG+ ID C CG+ ET+ H+ F+C A+ IW++ P
Sbjct: 684 RLKTFWWRVAHNCLAVMDNMRKRGIVIDNTCQTCGESTETLNHMLFECRVAKEIWEMIPT 743
Query: 382 HWFNTLST-DFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECW 206
++ + ST D I+N + K+D R L+ + W +WK RN +FH R
Sbjct: 744 SFYVSASTSDNLIENINYLLIGAKQDK----REALNFFAGWNIWKMRNNILFHHKRDHIL 799
Query: 205 EVVRAAVHE---WQEYLQIFGSSIEMDRGLQFN 116
V+ AA+ E W + + I SS + G Q N
Sbjct: 800 RVIHAAIRENQCWNKAIDI-ESSQKQSTGAQRN 831
>ref|XP_013720024.1| PREDICTED: uncharacterized protein LOC106423811 [Brassica napus]
Length = 314
Score = 85.9 bits (211), Expect = 7e-17
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = -3
Query: 565 NKLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAP 386
+K+ HFLWK +NN +P + + D RC C E ETI H+ F+C A+ +W ++P
Sbjct: 20 SKIHHFLWKCVNNALPAAANMKHIHITKDGRCMRCSMENETINHILFECPYARLVWALSP 79
Query: 385 VHW-FNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWEC 209
VH + + +D N W+ + R + +L ++LW +WK RN ++F +
Sbjct: 80 VHAPVDGIMSDSLYSNLWRVMSLQDRYPKEEAHADLVPWLLWRIWKNRNDFLFQGKDYAA 139
Query: 208 WEVVRAAVHEWQEYLQ 161
+ V A+ + +E+L+
Sbjct: 140 QDAVNKALEDMKEWLE 155
>ref|XP_009117187.1| PREDICTED: uncharacterized protein LOC103842327 [Brassica rapa]
Length = 428
Score = 86.3 bits (212), Expect = 1e-16
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKI--- 392
K+K F+WK LN +P L++KRGM++D RC +CG E E I H+ F C A+ +W +
Sbjct: 110 KIKIFVWKALNEALPVADLINKRGMKVDERCQLCGFEGEDINHVLFSCPFARQVWALSNI 169
Query: 391 -APVHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRW 215
+P H F+ LS F N+ V ++R R ++LW LWK RN +F RW
Sbjct: 170 PSPPHGFHHLSI-FENVNFLFGVTKLQRGDMEFKR--AWPWVLWNLWKCRNGLLFEGKRW 226
Query: 214 ECWEVVRAAVHEWQEY 167
E+V E +E+
Sbjct: 227 SPSEIVCKGFGESEEW 242
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 86.3 bits (212), Expect = 2e-16
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
KLKHFLW+ L+ + T L+ RGM IDP CP C E E+I H F C A W+++
Sbjct: 170 KLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDS 229
Query: 382 HWFNT--LSTDF--CIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRW 215
+S DF I N V D F L V+++W +WK RN +F+K R
Sbjct: 230 SLIRNQLMSNDFEENISNILNFVQDTTMSDF---HKLLPVWLIWRIWKARNNVVFNKFRE 286
Query: 214 ECWEVV---RAAVHEWQEYLQIFGSSIEMDRGLQFNSFGLENPGNKSCEVGHLNVVISAI 44
+ V +A H+W Q + R + N NP ++ A
Sbjct: 287 SPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNP-----PATYVKCNFDAG 341
Query: 43 TDLEKGTAIGG 11
D++K A GG
Sbjct: 342 FDVQKLEATGG 352
>ref|XP_013668927.1| PREDICTED: uncharacterized protein LOC106373275 [Brassica napus]
Length = 1338
Score = 86.3 bits (212), Expect = 2e-16
Identities = 41/135 (30%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K+++FLWK L+ +P L+ RGM++D RC +CG E E+I+H+ F+C+ A+++W ++ +
Sbjct: 1020 KIRNFLWKALSEALPVADLILIRGMKVDERCQVCGGEGESIQHVLFECDCARYVWALSGI 1079
Query: 382 ---HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWE 212
W F N++ ++ ++R R ++LW++WK+RN +F+ RW
Sbjct: 1080 PQPEWGLQTGHLFSNMNYFLNLNLLRRGEPEDKR--AWPWVLWFIWKSRNDLLFNGKRWA 1137
Query: 211 CWEVVRAAVHEWQEY 167
+++ A E E+
Sbjct: 1138 PDDIIMKAKMEASEW 1152
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 86.3 bits (212), Expect = 2e-16
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
KLKHFLW+ L+ + T L+ RGM IDP CP C E E+I H F C A W+++
Sbjct: 1436 KLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDS 1495
Query: 382 HWFNT--LSTDF--CIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRW 215
+S DF I N V D F L V+++W +WK RN +F+K R
Sbjct: 1496 SLIRNQLMSNDFEENISNILNFVQDTTMSDF---HKLLPVWLIWRIWKARNNVVFNKFRE 1552
Query: 214 ECWEVV---RAAVHEWQEYLQIFGSSIEMDRGLQFNSFGLENPGNKSCEVGHLNVVISAI 44
+ V +A H+W Q + R + N NP ++ A
Sbjct: 1553 SPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNP-----PATYVKCNFDAG 1607
Query: 43 TDLEKGTAIGG 11
D++K A GG
Sbjct: 1608 FDVQKLEATGG 1618
>ref|XP_009138597.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 622
Score = 85.5 bits (210), Expect = 3e-16
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIA-- 389
K+K FLWKVL+ +P L+ KRG++ID RC CG E E+I H FQC+ A+ +W ++
Sbjct: 304 KIKIFLWKVLSEALPVSELIIKRGLQIDERCQSCGVEGESILHALFQCDPARQVWALSGI 363
Query: 388 --PVHWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRW 215
P F+ S F N+ + + KR +R ++LW +WK+RN IF RW
Sbjct: 364 PHPKIGFDEGSL-FGNLNYLLKLKNSKRGEITVNR--TWPWLLWGIWKSRNELIFKGRRW 420
Query: 214 ECWEVVRAAVHEWQEY 167
E+ AV+E +E+
Sbjct: 421 LPEEIKEKAVYEAEEW 436
>ref|XP_010431723.1| PREDICTED: uncharacterized protein LOC104716077 [Camelina sativa]
Length = 490
Score = 85.1 bits (209), Expect = 4e-16
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K+KHF W+ L+N +PT L KR M D C CG+ ETI HL FQC ++ IW +
Sbjct: 171 KIKHFWWRCLHNVVPTAENLKKRRMLKDDTCQRCGEAPETINHLLFQCRISKEIWDLTAN 230
Query: 382 HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSV--YILWWLWKTRNIWIFHKTRWEC 209
FN + + F + + Q++ ++ + R + S+ +I W +WK RN IF+ RW
Sbjct: 231 --FNGIRSPFYLNSVDQNI-ELLLNLNNNQRKDASLFPFIGWRIWKMRNDLIFNNKRWSL 287
Query: 208 WEVVRAAVHEWQEYLQIFGSSIEMDRGLQFNSFGLENPGNKSCEVGHLNVVISAITDLEK 29
+ + A+ ++Q++ + + + + +S P + + N IS+IT K
Sbjct: 288 PDTINKAILDFQQWKESYSIN-------KHDSQKYTVPEHHKHQSSATNTSISSITKEAK 340
Query: 28 G 26
G
Sbjct: 341 G 341
>ref|XP_013660781.1| PREDICTED: uncharacterized protein LOC106365824 [Brassica napus]
Length = 838
Score = 85.1 bits (209), Expect = 5e-16
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K++ FLWK L+N +P L+S+RGM+++ RC +CG E E+I H F+C A+ +W ++ +
Sbjct: 520 KIRVFLWKCLSNALPVAELISERGMKVNMRCQLCGLEGESINHTLFECCVARQVWALSGM 579
Query: 382 HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELS-VYILWWLWKTRNIWIFHKTRWECW 206
D I ++ + ++ Q+R S ++LW LWK RN IF T + C
Sbjct: 580 PHPRNGFCDSSIFANVNYLLKMSKNLGIQERARRSWPWLLWNLWKNRNHLIFEGTSFSCT 639
Query: 205 EVVRAAVHEWQEY 167
E+ R A + E+
Sbjct: 640 EIARKAAADADEW 652
>ref|XP_010430818.1| PREDICTED: uncharacterized protein LOC104715064 [Camelina sativa]
Length = 392
Score = 84.3 bits (207), Expect = 5e-16
Identities = 46/141 (32%), Positives = 76/141 (53%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
KLKHF W+VL+ + T L++RG+ I+ C C VE+I H+ FQC A IW+++ +
Sbjct: 99 KLKHFYWRVLSAALGTAHELNRRGIPIEDTCQRCCQAVESINHMLFQCPYASKIWRLSNL 158
Query: 382 HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECWE 203
T S+ +++ + + + +D+ L +I W +WK+RN IF+K WE
Sbjct: 159 PAGFTFSSS--LEDNIEALLLMYNSGMNRDKQHLPFWIGWQIWKSRNDLIFNKITWETSS 216
Query: 202 VVRAAVHEWQEYLQIFGSSIE 140
V+ A + E+L SI+
Sbjct: 217 VLLKATDDVVEWLAATQPSIQ 237
>ref|XP_010446251.1| PREDICTED: uncharacterized protein LOC104729051 [Camelina sativa]
Length = 786
Score = 84.7 bits (208), Expect = 6e-16
Identities = 45/134 (33%), Positives = 70/134 (52%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K+KHF+W+VL+ CI +L + G+ D C CG + ET+ H F+C A+ W +A V
Sbjct: 457 KIKHFMWQVLSGCISVTAILRRWGIACDAGCARCGADEETVNHALFRCPSARQTWALAQV 516
Query: 382 HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWECWE 203
S F + + +V R+E +I+W++WK RN ++F R + E
Sbjct: 517 ---LVGSVSFPTDSLYANVDHFLGSDNPGSRVEAFPWIMWYIWKARNAYVFENIRDKPDE 573
Query: 202 VVRAAVHEWQEYLQ 161
VVR A+ E +LQ
Sbjct: 574 VVRLALGEAAVWLQ 587
>ref|XP_013589172.1| PREDICTED: uncharacterized protein LOC106297486 [Brassica oleracea
var. oleracea]
Length = 914
Score = 84.7 bits (208), Expect = 7e-16
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K++ FLWK L+N +P L+S+RGM++D RC +CG E E+I H F+C A+ +W ++ +
Sbjct: 596 KIRVFLWKCLSNALPVAELISERGMKVDMRCQLCGLEGESINHTLFECCVARQVWALSGM 655
Query: 382 HWFNTLSTDFCIKNWWQHVCDVKRDSFAQDRMELS-VYILWWLWKTRNIWIFHKTRWECW 206
D I ++ + ++ Q+R S ++LW LWK RN IF + C
Sbjct: 656 PHPRNGFCDSSIFANVNYLLKMSKNLGIQERARRSWPWLLWNLWKNRNHLIFEGISFSCT 715
Query: 205 EVVRAAVHEWQEY 167
E+ R A + E+
Sbjct: 716 EIARKAAADANEW 728
>ref|XP_013632378.1| PREDICTED: uncharacterized protein LOC106337810 [Brassica oleracea
var. oleracea] gi|923805135|ref|XP_013688737.1|
PREDICTED: uncharacterized protein LOC106392472
[Brassica napus]
Length = 291
Score = 82.8 bits (203), Expect = 8e-16
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = -3
Query: 547 LWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPVHWFNT 368
+WK LN +P L+ KRGM+ID RC MCG E E+I H FQC+ A+ +W ++ +
Sbjct: 1 MWKALNEALPVFELIIKRGMQIDGRCQMCGVEGESIIHALFQCDPARQVWALSEIPHSEI 60
Query: 367 LSTDFCIKNWWQHVCDVKRDSFAQDR-MELSVYILWWLWKTRNIWIFHKTRWECWEVVRA 191
+ + ++ +K + + + ++LW +WK+RN IF RW E+
Sbjct: 61 GFEEESMFGSLNYLLKLKNSKRGEVKVIRTWPWLLWGIWKSRNELIFKGRRWSPEEIKEK 120
Query: 190 AVHEWQEYLQI 158
AV+E +E+ +
Sbjct: 121 AVNEAEEWFLV 131
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 84.3 bits (207), Expect = 1e-15
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = -3
Query: 562 KLKHFLWKVLNNCIPTVWLLSKRGMEIDPRCPMCGDEVETIEHLFFQCERAQFIWKIAPV 383
K+K+ LW+ ++ +PT L RGM+IDP CP C E ETI H+ F C A IW ++
Sbjct: 1370 KIKYMLWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAASIWGLSNF 1429
Query: 382 HWF--NTLSTDFCIKNWWQHVCDVKRDSFAQDRMELSVYILWWLWKTRNIWIFHKTRWEC 209
W +T S D +N + ++ ++ +++W LWK RN +F+K C
Sbjct: 1430 PWLPGHTFSQD-TEENISFLINSFSNNTLNTEQRLAPFWLIWRLWKARNNLVFNKFSESC 1488
Query: 208 WEVVRAAVHEWQEYLQ 161
VV E E+LQ
Sbjct: 1489 SRVVTQTEAEVNEWLQ 1504