BLASTX nr result

ID: Rehmannia27_contig00058356 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00058356
         (459 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009123737.1| PREDICTED: uncharacterized protein LOC103848...    56   1e-06
ref|XP_013633184.1| PREDICTED: uncharacterized protein LOC106338...    53   6e-06
ref|XP_013588978.1| PREDICTED: uncharacterized protein LOC106297...    54   7e-06
ref|XP_013704973.1| PREDICTED: uncharacterized protein LOC106408...    54   1e-05
ref|XP_009139688.1| PREDICTED: uncharacterized protein LOC103863...    54   1e-05

>ref|XP_009123737.1| PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]
          Length = 252

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
 Frame = +1

Query: 4   LSVYILWWLWKTRNLWVFQEVKKSAREVIEGA---QREWQEFQLL-VLPEKKINCCKKLL 171
           +S +I W+LW  RNL VF+    +AR  I  A    REWQ  Q    +P           
Sbjct: 54  ISSWICWYLWSARNLLVFENRHVTARTTISSALSSAREWQAAQHYDTVPR---------- 103

Query: 172 NQVCEEISPKATTVEPF----FTVV---SAAIAKGEKTGLGGWICDGQGKKI-HTWAVSR 327
                  SP  T  EP     F V+    AA +K  +T   GW+ DG         + +R
Sbjct: 104 -------SPSLTPPEPHNEGPFAVLCNSDAAWSKETETAGLGWMFDGPAPAARQCMSTTR 156

Query: 328 EIASTPVDAVQLGIRQAMFFASKRGLKNVTIQIDDEDIISKLN 456
              S+P+ A  L +R+A+  A +  L NV  + D ++++  +N
Sbjct: 157 HAVSSPLMAEALAMREALQAAKQGLLSNVWFRTDSQELVRAIN 199


>ref|XP_013633184.1| PREDICTED: uncharacterized protein LOC106338847 [Brassica oleracea
           var. oleracea]
          Length = 173

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
 Frame = +1

Query: 13  YILWWLWKTRNLWVFQEVKKSAREVIEGA---QREWQEFQLLVLPEKKINCCKKLLNQVC 183
           +I+W +W TRN  +F+     A E +  A    REWQE QL   P           +   
Sbjct: 42  WIVWTVWTTRNQRIFENRTFDATETLTKAITYAREWQEAQLDATP-----------SATT 90

Query: 184 EEISPKATTVEPFFTVVSAAIAKGEKTGLGG--WI-CDGQGKKIHTWAVSREIASTPVDA 354
              +P A       T ++   A  E+    G  WI  D   + IH  + + E  S+P+ A
Sbjct: 91  VMAAPSAHRNRLIVTTINTDAAWDEEAKTAGLAWIFTDNTCQIIHQGSTTEEWVSSPLIA 150

Query: 355 VQLGIRQAMFFASKRGLKNVTIQ 423
             L IR+A+F A  RG  N+ ++
Sbjct: 151 EGLAIREALFQAKARGYTNIELK 173


>ref|XP_013588978.1| PREDICTED: uncharacterized protein LOC106297245 [Brassica oleracea
           var. oleracea]
          Length = 346

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
 Frame = +1

Query: 1   QLSVYILWWLWKTRNLWVFQEVKKSAREVIEGAQR---EWQEFQLLVLPEKKINCCKKLL 171
           QL  +ILW LWK RN +VF     S  + +  A R   EW++  ++    +K    + L 
Sbjct: 147 QLFPWILWTLWKERNRFVFNGYSASPEDTLATAIRSAKEWEQGHMI----EKSTPPRSL- 201

Query: 172 NQVCEEISPKATTVEPFFTVVSAAIAKGEKTGLGGWICDGQGKKIHTWAVSREIASTPVD 351
             V +E    AT V        AA  K +K    GW       +I        + S+P+ 
Sbjct: 202 -PVTKETHTAATIVRS-----DAAWRKEDKKAGLGWTVKTSRFEIRMKKTQWHV-SSPLI 254

Query: 352 AVQLGIRQAMFFASKRGLKNVTIQIDDEDIISKLN 456
           A  L IR+AM F  + GL N+ ++ D   +I  +N
Sbjct: 255 AEGLAIREAMLFCREHGLDNILLECDSSQLIRAIN 289


>ref|XP_013704973.1| PREDICTED: uncharacterized protein LOC106408824 [Brassica napus]
          Length = 387

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
 Frame = +1

Query: 4   LSVYILWWLWKTRNLWVFQEVKKSAREVIEG---AQREWQEFQLLVLPEKKINCCKKLLN 174
           LS +ILW +W +RNL +F+    +AR ++     A REW       L  + +N  K    
Sbjct: 189 LSPWILWGIWTSRNLILFENKSVTARSMVVNAVVAAREW-------LLAQVVNTTKSSPT 241

Query: 175 QVCEEISPKATTVEPFFTVVSAAIAKGEKTGLGGWICDGQGKKIHTWAVSREI--ASTPV 348
           Q   E  P  T  +  +    AA +   + GL GW        +++   SR I   S+P+
Sbjct: 242 QTGNETPP--TNPDVIYCNTDAAWSVSRRAGL-GWCFKNAAHSVYSEG-SRAIDHISSPL 297

Query: 349 DAVQLGIRQAMFFASKRGLKNVTIQIDDEDIISKLN 456
            A  L +R+AM  A +  L NV  + D +++   +N
Sbjct: 298 MAEALAMREAMQEAKRTSLLNVWFRTDSQELARAIN 333


>ref|XP_009139688.1| PREDICTED: uncharacterized protein LOC103863688 [Brassica rapa]
          Length = 395

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
 Frame = +1

Query: 13  YILWWLWKTRNLWVFQEVKKSAREVIEGA---QREWQEFQLLVLPEKKINCCKKLLNQVC 183
           +I+W +W  RNL +F+    S  E +  A    REWQ+ Q ++ P          L Q+ 
Sbjct: 201 WIIWSIWTARNLKIFENRSFSPSETLTKAIADAREWQDAQQMIPP---------TLPQL- 250

Query: 184 EEISPKATTVEPFFTVVSAAIAKGEKTGLG-GWICDG-------QGKKIHTWAVSREIAS 339
           ++ S   + +   FT+ + A  + E    G  W C         QG     W  S ++A 
Sbjct: 251 QQPSRHPSGLNTRFTIFTDAAWRKESLTAGLAWSCTDNHGNIVFQGSTPEPWVESAQLAE 310

Query: 340 TPVDAVQLGIRQAMFFASKRGLKNVTIQIDDEDIISKLN 456
                  L IR+A+  A  +GL N+TI+ D + II  +N
Sbjct: 311 ------GLAIREALLQAQAQGLNNITIKSDAQIIIRAIN 343


Top