BLASTX nr result
ID: Rehmannia27_contig00058328
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00058328
(982 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_227373.1| polymerase [Strawberry latent ringspot virus] 575 0.0
gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1] 610 0.0
gb|AKN59247.1| polyprotein [Lychnis mottle virus] 599 0.0
gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2] 592 0.0
ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot... 575 0.0
ref|NP_734022.1| RNA-dependent RNA polymerase [Apple latent sphe... 220 1e-62
ref|NP_620568.1| 235K polyprotein [Apple latent spherical virus]... 220 6e-61
gb|AAZ76594.1| polyprotein, partial [Stocky prune virus] 216 7e-61
gb|AAW92113.2| polyprotein [Cherry rasp leaf virus] 217 7e-60
gb|AHN52254.1| polyprotein, partial [Currant latent virus] 212 1e-59
ref|YP_081454.1| RNA-dependent RNA polymerase [Cherry rasp leaf ... 212 1e-59
ref|YP_081444.1| polyprotein [Cherry rasp leaf virus] gi|8200270... 212 4e-58
ref|YP_009220374.1| polyprotein [Currant latent virus] gi|966557... 211 5e-58
ref|YP_007697622.1| polyprotein [Arracacha virus B] gi|385724523... 205 7e-56
gb|AAB42056.1| putative RNA polymerase [Broad bean wilt virus 2] 174 3e-49
gb|AAY32935.1| RNA-dependent RNA polymerase, partial [Radish mos... 177 1e-46
gb|ACK86674.1| RNA-dependent RNA polymerase, partial [Broad bean... 174 3e-46
dbj|BAG84602.1| RNA1-polyprotein [Radish mosaic virus] 177 4e-46
gb|ACE06773.1| polyprotein [Radish mosaic virus] 177 5e-46
dbj|BAA34928.1| polyprotein [Broad bean wilt virus 2] 176 7e-46
>ref|YP_227373.1| polymerase [Strawberry latent ringspot virus]
Length = 675
Score = 575 bits (1482), Expect = 0.0
Identities = 277/320 (86%), Positives = 293/320 (91%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + NYLVRKYFGSFVAELMKLHN IPTKVGINPLGYDWTILGK+MHAKGTNWFN
Sbjct: 219 LFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVGINPLGYDWTILGKKMHAKGTNWFN 278
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRLHLMLAATTRLGVAGIGLYRVSGGIP 380
GDYSRFDGVTPRCLLIEI+ RIT LY D RRLHLMLAATTRLGVAGIGLYRVSGGIP
Sbjct: 279 GDYSRFDGVTPRCLLIEISNRITKLYGDEHRERRLHLMLAATTRLGVAGIGLYRVSGGIP 338
Query: 381 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 560
GFALTVIVNSLVNHFLVRWSWEHMMAS+SLFF+DCVELAVVGDDNLVSVK+VAA DFNL
Sbjct: 339 PGFALTVIVNSLVNHFLVRWSWEHMMASSSLFFTDCVELAVVGDDNLVSVKQVAAEDFNL 398
Query: 561 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXXXXXXXXX 740
KKLSAFLA FGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAP
Sbjct: 399 KKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPLSWLSLSES 458
Query: 741 XHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSKNRVPHPTTYSFE 920
HWVRETN++NA ATQNNVEGFLRELFHYGDK+LYCKWRRDLI LC++NRVPHPT+YSFE
Sbjct: 459 LHWVRETNMTNAAATQNNVEGFLRELFHYGDKELYCKWRRDLISLCAENRVPHPTSYSFE 518
Query: 921 ELERSWLSGRSVASIFEKEE 980
ELERSWLSG++VASIFEKEE
Sbjct: 519 ELERSWLSGKTVASIFEKEE 538
>gb|AKN59243.1| polyprotein [Cnidium vein yellowing virus 1]
Length = 2205
Score = 610 bits (1573), Expect = 0.0
Identities = 297/320 (92%), Positives = 305/320 (95%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + NYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN
Sbjct: 1749 LFTILPMEYNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 1808
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRLHLMLAATTRLGVAGIGLYRVSGGIP 380
GDYSRFDGVTPRCLLIEIARRITLLYND+QG+RRLHLMLAATTRLGVAGIGLYRVSGGIP
Sbjct: 1809 GDYSRFDGVTPRCLLIEIARRITLLYNDDQGNRRLHLMLAATTRLGVAGIGLYRVSGGIP 1868
Query: 381 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 560
SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL
Sbjct: 1869 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 1928
Query: 561 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXXXXXXXXX 740
KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAP
Sbjct: 1929 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPLSWLSLSES 1988
Query: 741 XHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSKNRVPHPTTYSFE 920
HWVRETN+SNA ATQNNVEGFLRELFHYGDK+LYCKWRRDLIDLCSKNRVPHPTTYSFE
Sbjct: 1989 LHWVRETNMSNAAATQNNVEGFLRELFHYGDKNLYCKWRRDLIDLCSKNRVPHPTTYSFE 2048
Query: 921 ELERSWLSGRSVASIFEKEE 980
ELERSWLSG+SVASIFEKEE
Sbjct: 2049 ELERSWLSGKSVASIFEKEE 2068
>gb|AKN59247.1| polyprotein [Lychnis mottle virus]
Length = 2260
Score = 599 bits (1544), Expect = 0.0
Identities = 288/320 (90%), Positives = 301/320 (94%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + NYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN
Sbjct: 1804 LFTILPMEYNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 1863
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRLHLMLAATTRLGVAGIGLYRVSGGIP 380
GDYSRFDGVTPRCLL+EI+RRIT LYNDNQG RRLHLMLAATTRLGVAGIGLYRVSGGIP
Sbjct: 1864 GDYSRFDGVTPRCLLVEISRRITALYNDNQGDRRLHLMLAATTRLGVAGIGLYRVSGGIP 1923
Query: 381 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 560
SGFALTVIVNSLVNHFLVRWSWEHMMAS+SLFFSDCVELAVVGDDNLVSVK++AA+DFNL
Sbjct: 1924 SGFALTVIVNSLVNHFLVRWSWEHMMASSSLFFSDCVELAVVGDDNLVSVKQIAAADFNL 1983
Query: 561 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXXXXXXXXX 740
KKLS FLA FGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAP
Sbjct: 1984 KKLSLFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPLSWLSLSES 2043
Query: 741 XHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSKNRVPHPTTYSFE 920
HWVRETN+SNA ATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCS+NRVPHPTTYSFE
Sbjct: 2044 LHWVRETNMSNAAATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSRNRVPHPTTYSFE 2103
Query: 921 ELERSWLSGRSVASIFEKEE 980
ELERSWLSG++VASIFEKEE
Sbjct: 2104 ELERSWLSGKTVASIFEKEE 2123
>gb|AKN59245.1| polyprotein [Cnidium vein yellowing virus 2]
Length = 2209
Score = 592 bits (1527), Expect = 0.0
Identities = 285/320 (89%), Positives = 301/320 (94%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + NYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN
Sbjct: 1753 LFTILPMEYNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 1812
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRLHLMLAATTRLGVAGIGLYRVSGGIP 380
GD SRFDGVTPRCLL+EI+RRITLLY D+QG RRLHLMLAATTRLGVAGIGLYRVSGGIP
Sbjct: 1813 GDSSRFDGVTPRCLLVEISRRITLLYGDDQGDRRLHLMLAATTRLGVAGIGLYRVSGGIP 1872
Query: 381 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 560
SGFALTVIVNSLVNHFLVRWSWEHMMAS+SLFFSDCVELAVVGDDNLVSVK++AA+DFNL
Sbjct: 1873 SGFALTVIVNSLVNHFLVRWSWEHMMASSSLFFSDCVELAVVGDDNLVSVKQIAAADFNL 1932
Query: 561 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXXXXXXXXX 740
KKLS+FLA FGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAP
Sbjct: 1933 KKLSSFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPLSWLSLSES 1992
Query: 741 XHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSKNRVPHPTTYSFE 920
HWVRETN+SN+ ATQNNVEGFLRELFHYGDK+LYCKWRRDLIDLCSKNRVPHPTTYSFE
Sbjct: 1993 LHWVRETNMSNSAATQNNVEGFLRELFHYGDKELYCKWRRDLIDLCSKNRVPHPTTYSFE 2052
Query: 921 ELERSWLSGRSVASIFEKEE 980
ELERSWLSG++VASIFEKEE
Sbjct: 2053 ELERSWLSGKTVASIFEKEE 2072
>ref|YP_227367.1| 250 kDa polyprotein [Strawberry latent ringspot virus]
gi|58040997|gb|AAW63128.1| 250 kDa polyprotein
[Strawberry latent ringspot virus]
Length = 2227
Score = 575 bits (1482), Expect = 0.0
Identities = 277/320 (86%), Positives = 293/320 (91%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + NYLVRKYFGSFVAELMKLHN IPTKVGINPLGYDWTILGK+MHAKGTNWFN
Sbjct: 1771 LFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVGINPLGYDWTILGKKMHAKGTNWFN 1830
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRLHLMLAATTRLGVAGIGLYRVSGGIP 380
GDYSRFDGVTPRCLLIEI+ RIT LY D RRLHLMLAATTRLGVAGIGLYRVSGGIP
Sbjct: 1831 GDYSRFDGVTPRCLLIEISNRITKLYGDEHRERRLHLMLAATTRLGVAGIGLYRVSGGIP 1890
Query: 381 SGFALTVIVNSLVNHFLVRWSWEHMMASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNL 560
GFALTVIVNSLVNHFLVRWSWEHMMAS+SLFF+DCVELAVVGDDNLVSVK+VAA DFNL
Sbjct: 1891 PGFALTVIVNSLVNHFLVRWSWEHMMASSSLFFTDCVELAVVGDDNLVSVKQVAAEDFNL 1950
Query: 561 KKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXXXXXXXXX 740
KKLSAFLA FGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAP
Sbjct: 1951 KKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPLSWLSLSES 2010
Query: 741 XHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCSKNRVPHPTTYSFE 920
HWVRETN++NA ATQNNVEGFLRELFHYGDK+LYCKWRRDLI LC++NRVPHPT+YSFE
Sbjct: 2011 LHWVRETNMTNAAATQNNVEGFLRELFHYGDKELYCKWRRDLISLCAENRVPHPTSYSFE 2070
Query: 921 ELERSWLSGRSVASIFEKEE 980
ELERSWLSG++VASIFEKEE
Sbjct: 2071 ELERSWLSGKTVASIFEKEE 2090
>ref|NP_734022.1| RNA-dependent RNA polymerase [Apple latent spherical virus]
Length = 709
Score = 220 bits (560), Expect = 1e-62
Identities = 139/337 (41%), Positives = 189/337 (56%), Gaps = 20/337 (5%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF SFV++LM LHN +PTKVGI+P+ +W+IL +H+KGTNWFN
Sbjct: 216 LFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVGIDPISNEWSILCHSLHSKGTNWFN 275
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYND-------------NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L I +RI+ Y + N R LM +TR G+
Sbjct: 276 GDYSRFDGITPRNVLQGIVKRISRRYANKSSFAITDPTLSINGDLARSLLMDMCSTRYGL 335
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMAS---TSLF----FSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN F V +++ + +S +L+ F V A
Sbjct: 336 TNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYA 395
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
V GDDNL+SV + FNL +S L + G TLK+G+DKN+EIL F P EK DFLKR
Sbjct: 396 VYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRR 455
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRR 860
F +AP HWVR+ + +A AT N + L E +G +LY R
Sbjct: 456 FTTLQGHIVAPLNTVNITERLHWVRK-GLGDADATLENCKSALFEALFHG--ELYYNDLR 512
Query: 861 DLIDLCSKNRVPHPTTYSFEELERSWLSGRSVASIFE 971
I+ K + +++ +L+G S A +
Sbjct: 513 GKIEKACKVKGLPLIVPDYQDALSLFLTGGSYAKAIQ 549
>ref|NP_620568.1| 235K polyprotein [Apple latent spherical virus]
gi|7007468|dbj|BAA90870.1| 235K polyprotein [Apple latent
spherical virus]
Length = 2079
Score = 220 bits (560), Expect = 6e-61
Identities = 139/337 (41%), Positives = 189/337 (56%), Gaps = 20/337 (5%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF SFV++LM LHN +PTKVGI+P+ +W+IL +H+KGTNWFN
Sbjct: 1586 LFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVGIDPISNEWSILCHSLHSKGTNWFN 1645
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYND-------------NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L I +RI+ Y + N R LM +TR G+
Sbjct: 1646 GDYSRFDGITPRNVLQGIVKRISRRYANKSSFAITDPTLSINGDLARSLLMDMCSTRYGL 1705
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMAS---TSLF----FSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN F V +++ + +S +L+ F V A
Sbjct: 1706 TNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYA 1765
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
V GDDNL+SV + FNL +S L + G TLK+G+DKN+EIL F P EK DFLKR
Sbjct: 1766 VYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRR 1825
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRR 860
F +AP HWVR+ + +A AT N + L E +G +LY R
Sbjct: 1826 FTTLQGHIVAPLNTVNITERLHWVRK-GLGDADATLENCKSALFEALFHG--ELYYNDLR 1882
Query: 861 DLIDLCSKNRVPHPTTYSFEELERSWLSGRSVASIFE 971
I+ K + +++ +L+G S A +
Sbjct: 1883 GKIEKACKVKGLPLIVPDYQDALSLFLTGGSYAKAIQ 1919
>gb|AAZ76594.1| polyprotein, partial [Stocky prune virus]
Length = 795
Score = 216 bits (551), Expect = 7e-61
Identities = 127/300 (42%), Positives = 173/300 (57%), Gaps = 17/300 (5%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L+++ N LVR+YF FV++ M+ HN P KVGINP +WT L + + +KGTNWFN
Sbjct: 318 LFTVLPFEYNLLVREYFMDFVSKYMQRHNECPGKVGINPQSIEWTNLYENLRSKGTNWFN 377
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSR------RLHLMLAATTRLGVAGIGLYR 362
GD+ RFDG+TPR +++++ RI LY R R LML A+ R +AG LY+
Sbjct: 378 GDFERFDGITPRDVMVQLVIRINKLYKRGDADRPLANKVRSLLMLMASDRYAIAGRNLYK 437
Query: 363 VSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMAST-------SLFFSDCVELAVVGDDNL 521
VS GIPSGF+LTVIVNSLVN F +R++W+ ++ ++ V AV GDDNL
Sbjct: 438 VSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHFAVYGDDNL 497
Query: 522 VSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNP-PEKCDFLKRCF-KARG 695
VSV + +S +NL +S+FL + G LK+G K++E P F+P P CDFLKR F
Sbjct: 498 VSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPSTCDFLKRRFVLGSS 557
Query: 696 DRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRE--LFHYGDKDLYCKWRRDLI 869
R LAP HWVR++ Q NV+G LRE F + + RR L+
Sbjct: 558 GRVLAPLDKSSLLGCAHWVRKSQDPGEAIVQ-NVQGILRECVAFEENSYEFFHDMRRKLL 616
>gb|AAW92113.2| polyprotein [Cherry rasp leaf virus]
Length = 2235
Score = 217 bits (552), Expect = 7e-60
Identities = 131/289 (45%), Positives = 166/289 (57%), Gaps = 21/289 (7%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF SFV+ +M HN IP KVGI+ L +W+IL ++ +KGTNWFN
Sbjct: 1744 LFTILPVDYNILVRKYFLSFVSHIMTQHNTIPVKVGIDCLSNEWSILYHQLRSKGTNWFN 1803
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYND-------------NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L I +RI YN+ N R LM A+TR G+
Sbjct: 1804 GDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLMDMASTRYGL 1863
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMASTSL-------FFSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN+F + +S+ +M L F V A
Sbjct: 1864 TNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYA 1923
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
GDDNLVSV +V FNL K++ LA+ G TLK+G+DKN+EIL F P EK DFLKR
Sbjct: 1924 TYGDDNLVSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRK 1983
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRE-LFH 824
F +AP HW+R+ + A AT N E LFH
Sbjct: 1984 FVHYQGHVVAPLNPVNITERLHWIRK-GLGEADATLENCSSAAFEALFH 2031
>gb|AHN52254.1| polyprotein, partial [Currant latent virus]
Length = 721
Score = 212 bits (540), Expect = 1e-59
Identities = 138/339 (40%), Positives = 182/339 (53%), Gaps = 22/339 (6%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF SFV++LM LHN PTKVGINPL +W IL + AKG NWFN
Sbjct: 238 LFTILPVHYNILVRKYFLSFVSQLMALHNETPTKVGINPLSNEWGILQFALSAKGENWFN 297
Query: 201 GDYSRFDGVTPRCLLIEIARRI--------TLLYND-----NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L+ I +RI +L D N R LM A+TR G+
Sbjct: 298 GDYSRFDGITPRSVLLGIVKRISNRFVNKNSLAITDKTLSINGDLARSLLMDMASTRYGL 357
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMASTS-------LFFSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN F + +++ + ++ F V A
Sbjct: 358 TQGDLWYVNSGIPSGFPLTVIVNSLVNSFFIHYAYRSICKKSNDMDLYPLYSFKQLVSYA 417
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
V GDDN+VSV ++ FNL L+ FL D+G TLK+G+DK++EIL F P K DFLKR
Sbjct: 418 VYGDDNIVSVNDLIKDKFNLVILADFLKDYGVTLKNGADKDEEILSPFYPISKVDFLKRK 477
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRR 860
F ++P HWVR+ +N +FH + Y
Sbjct: 478 FTVLQGHVVSPLNRINITERLHWVRKGMTEVDAIVENCQSAAFEAVFH--GEHYYKDICG 535
Query: 861 DLIDLCSKN--RVPHPTTYSFEELERSWLSGRSVASIFE 971
+ C+KN V PT F++ LSG S A+ +
Sbjct: 536 VIKKACTKNGITVDLPT---FQDALNIHLSGGSFATAIQ 571
>ref|YP_081454.1| RNA-dependent RNA polymerase [Cherry rasp leaf virus]
Length = 707
Score = 212 bits (539), Expect = 1e-59
Identities = 129/289 (44%), Positives = 164/289 (56%), Gaps = 21/289 (7%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF S V+ +M HN IP KVGI+ L +W+IL ++ +KGTNWFN
Sbjct: 216 LFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVGIDCLSNEWSILYHQLRSKGTNWFN 275
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYND-------------NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L I +RI YN+ N R L A+TR G+
Sbjct: 276 GDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLTDMASTRYGL 335
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMASTSL-------FFSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN+F + +S+ +M L F V A
Sbjct: 336 TNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYA 395
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
GDDNLVSV +V FNL K++ LA+ G TLK+G+DKN+EIL F P EK DFLKR
Sbjct: 396 TYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRK 455
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRE-LFH 824
F +AP HW+R+ + A AT N E LFH
Sbjct: 456 FVHYQGHVVAPLNPVNITERLHWIRK-GLGEADATLENCSSAAFEALFH 503
>ref|YP_081444.1| polyprotein [Cherry rasp leaf virus]
gi|82002707|sp|Q6EWG9.1|POL1_CRLVP RecName: Full=RNA1
polyprotein; AltName: Full=Genome polyprotein B; AltName:
Full=P1; Contains: RecName: Full=Protease cofactor;
Contains: RecName: Full=Putative helicase; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; Contains: RecName: Full=RNA-directed RNA
polymerase gi|50399319|emb|CAF21713.1| polyprotein
[Cherry rasp leaf virus]
Length = 2250
Score = 212 bits (539), Expect = 4e-58
Identities = 129/289 (44%), Positives = 164/289 (56%), Gaps = 21/289 (7%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF S V+ +M HN IP KVGI+ L +W+IL ++ +KGTNWFN
Sbjct: 1759 LFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVGIDCLSNEWSILYHQLRSKGTNWFN 1818
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYND-------------NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L I +RI YN+ N R L A+TR G+
Sbjct: 1819 GDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLTDMASTRYGL 1878
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMASTSL-------FFSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN+F + +S+ +M L F V A
Sbjct: 1879 TNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYA 1938
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
GDDNLVSV +V FNL K++ LA+ G TLK+G+DKN+EIL F P EK DFLKR
Sbjct: 1939 TYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRK 1998
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRE-LFH 824
F +AP HW+R+ + A AT N E LFH
Sbjct: 1999 FVHYQGHVVAPLNPVNITERLHWIRK-GLGEADATLENCSSAAFEALFH 2046
>ref|YP_009220374.1| polyprotein [Currant latent virus] gi|966557892|gb|ALT45950.1|
polyprotein [Currant latent virus]
Length = 2124
Score = 211 bits (538), Expect = 5e-58
Identities = 138/339 (40%), Positives = 182/339 (53%), Gaps = 22/339 (6%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I + N LVRKYF SFV++LM LHN PTKVGINPL +W IL + AKG NWFN
Sbjct: 1641 LFTILPVHYNILVRKYFLSFVSQLMALHNETPTKVGINPLSNEWGILQFALSAKGENWFN 1700
Query: 201 GDYSRFDGVTPRCLLIEIARRI--------TLLYND-----NQGSRRLHLMLAATTRLGV 341
GDYSRFDG+TPR +L+ I +RI +L D N R LM A+TR G+
Sbjct: 1701 GDYSRFDGITPRSVLLGIVKRISNRFVNKNSLAITDKTLSINGDLARSLLMDMASTRYGL 1760
Query: 342 AGIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMASTS-------LFFSDCVELA 500
L+ V+ GIPSGF LTVIVNSLVN F + +++ + ++ F V A
Sbjct: 1761 TQGDLWYVNSGIPSGFPLTVIVNSLVNSFFIHYAYMSICKKSNDMDLYPLYSFKQLVSYA 1820
Query: 501 VVGDDNLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRC 680
V GDDN+VSV ++ FNL L+ FL D+G TLK+G+DK++EIL F P K DFLKR
Sbjct: 1821 VYGDDNIVSVNDLIKDKFNLVILADFLKDYGVTLKNGADKDEEILSPFYPISKVDFLKRK 1880
Query: 681 FKARGDRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRR 860
F ++P HWVR+ +N +FH + Y
Sbjct: 1881 FTVLQGHVVSPLNRINITERLHWVRKGMTEVDAIVENCQSAAFEAVFH--GEHYYKDICG 1938
Query: 861 DLIDLCSKN--RVPHPTTYSFEELERSWLSGRSVASIFE 971
+ C+KN V PT F++ LSG S A+ +
Sbjct: 1939 VIKKACTKNGITVDLPT---FQDALNIHLSGGSFATAIQ 1974
>ref|YP_007697622.1| polyprotein [Arracacha virus B] gi|385724523|gb|AFI74271.1|
polyprotein [Arracacha virus B]
Length = 2314
Score = 205 bits (522), Expect = 7e-56
Identities = 122/307 (39%), Positives = 174/307 (56%), Gaps = 15/307 (4%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L++I N +VR+++ FVA LM+ HN P KVG+N +W L ++ A G NWFN
Sbjct: 1683 LFTILPFHYNLVVRRFYLDFVARLMQKHNETPVKVGLNTSSLEWQHLYDQLSAVGFNWFN 1742
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQ-----GSRRLHLMLA-------ATTRLGVA 344
GDYSRFDG+TPRC+L +A RI+ Y ++ +++ +A A +R G+A
Sbjct: 1743 GDYSRFDGITPRCVLQGLAIRISKFYRQDEAQGLVSKKKIRTSVAHSLLLDMANSRYGIA 1802
Query: 345 GIGLYRVSGGIPSGFALTVIVNSLVNHFLVRWSWEHMMA---STSLFFSDCVELAVVGDD 515
G+G+Y+VS GIPSGF LTVIVNSLVN F + +++ +M+ + +F+ V AV GDD
Sbjct: 1803 GLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLMSQSLKSHFWFTKNVAFAVYGDD 1862
Query: 516 NLVSVKEVAASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARG 695
NLVSV E + +NLK ++ FL FG TLK+G++K++EIL F P E DFLKR F
Sbjct: 1863 NLVSVSESIKNVYNLKTIAHFLTQFGVTLKNGANKDEEILSSFYPIEGVDFLKRTFVPFR 1922
Query: 696 DRYLAPXXXXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDL 875
L HWVR+ A +N L E +G + Y R L+ +
Sbjct: 1923 GVMLDRLNKENTLERLHWVRK-GTDEIDAILDNCGSCLLECIAHG-PEFYEDIRSKLVRV 1980
Query: 876 CSKNRVP 896
K ++P
Sbjct: 1981 LGKRKLP 1987
>gb|AAB42056.1| putative RNA polymerase [Broad bean wilt virus 2]
Length = 280
Score = 174 bits (442), Expect = 3e-49
Identities = 107/270 (39%), Positives = 149/270 (55%), Gaps = 6/270 (2%)
Frame = +3
Query: 48 NYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFNGDYSRFDGV 227
N ++RK F +FV MK +V+P +VGINP +WT + ++ +KG N DYSRFDG
Sbjct: 4 NIVIRKKFLNFVRFFMKRRDVLPAQVGINPYSREWTRMANKLLSKGNNILCCDYSRFDGF 63
Query: 228 TPRCLLIEIARRITLLYNDNQGSRR--LHLMLAATTRLGVAGIGLYRVSGGIPSGFALTV 401
P+C++ EI I L ++ S+ +LMLA T+R + LYRV GIPSGF LTV
Sbjct: 64 LPKCIMNEIGNMIARLMKVDEVSKAQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTV 123
Query: 402 IVNSLVNHFLVRWSWEHMM---ASTSLFFSDCVELAVVGDDNLVSVKEVAASDFNLKKLS 572
IVNS++N LV++++ H S F V + V GDDNL+SV + +S F+ L
Sbjct: 124 IVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLV 183
Query: 573 AFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGD-RYLAPXXXXXXXXXXHW 749
+F+ G + DG DK K I EF E CDFLKR FK D + +P H+
Sbjct: 184 SFMEGLGIKVTDGIDKTK-IGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHF 242
Query: 750 VRETNVSNAVATQNNVEGFLRELFHYGDKD 839
V+ + A A NN LREL+ + K+
Sbjct: 243 VKAKKLEMAEAYINNCNNILRELWLHDVKE 272
>gb|AAY32935.1| RNA-dependent RNA polymerase, partial [Radish mosaic virus]
Length = 709
Score = 177 bits (448), Expect = 1e-46
Identities = 107/280 (38%), Positives = 155/280 (55%), Gaps = 8/280 (2%)
Frame = +3
Query: 24 YSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFNG 203
+SI + N LVR+ F +FV +M+ NV+P +VGINP G +WT L R+ KG N
Sbjct: 223 FSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVGINPYGMEWTDLAMRLKRKGNNILCC 282
Query: 204 DYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRL--HLMLAATTRLGVAGIGLYRVSGGI 377
DYS FDG+ + ++ ++ I ++ S+R HL++A +R + +++V GI
Sbjct: 283 DYSSFDGLLSKQVMKAMSDMINSFCGGSESSKRKREHLLMACCSRYAICKNSVWKVECGI 342
Query: 378 PSGFALTVIVNSLVNHFLVRWSWEHMMAS------TSLFFSDCVELAVVGDDNLVSVKEV 539
PSGF LTVI NS+ N L+R+S++ ++ S S+ F + V + V GDDNL+SV EV
Sbjct: 343 PSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEV 402
Query: 540 AASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXX 719
F+ K+L FLA T+ DG DK L +F E CDFLKR FK RG + AP
Sbjct: 403 IKPYFDGKRLKEFLATLRITITDGKDKTSPFL-QFRCLEDCDFLKRGFKNRGLYWDAPEE 461
Query: 720 XXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKD 839
H+V N+ A + N+ LRELF + K+
Sbjct: 462 KESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMWDKKE 501
>gb|ACK86674.1| RNA-dependent RNA polymerase, partial [Broad bean wilt virus 2]
Length = 594
Score = 174 bits (441), Expect = 3e-46
Identities = 108/279 (38%), Positives = 153/279 (54%), Gaps = 6/279 (2%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L+++ + N ++RK F +FV MK +V+P +VGINP +WT + ++ +KG N
Sbjct: 114 LFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQVGINPYSREWTRMANKLLSKGNNILC 173
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRR--LHLMLAATTRLGVAGIGLYRVSGG 374
DYSRFDG P+C++ EI I L ++ SR +LMLA T+R + LYRV G
Sbjct: 174 CDYSRFDGFLPKCIMNEIGNMIARLLKVDEVSRTQIKNLMLACTSRYAMCNRVLYRVENG 233
Query: 375 IPSGFALTVIVNSLVNHFLVRWSWEHMMA---STSLFFSDCVELAVVGDDNLVSVKEVAA 545
IPSGF LTVIVNS++N LV++++ H S F V + V GDDNL+SV + +
Sbjct: 234 IPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNLISVSDAIS 293
Query: 546 SDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGD-RYLAPXXX 722
S F+ L +F+ G + DG DK K I EF E CDFLKR FK D + +P
Sbjct: 294 SKFDGSFLVSFMEGLGIKVTDGIDKTK-IGIEFRRLENCDFLKRSFKMSPDGTWRSPMSK 352
Query: 723 XXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKD 839
H+V+ + A A NN L EL+ + K+
Sbjct: 353 ESLWPQLHFVKAKKLEMAEAYINNCNNILCELWLHDVKE 391
>dbj|BAG84602.1| RNA1-polyprotein [Radish mosaic virus]
Length = 1853
Score = 177 bits (449), Expect = 4e-46
Identities = 112/294 (38%), Positives = 161/294 (54%), Gaps = 8/294 (2%)
Frame = +3
Query: 24 YSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFNG 203
+SI + N LVR+ F +FV +M+ NV+P +VGINP G +WT L R+ KG N
Sbjct: 1367 FSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVGINPYGMEWTDLAMRLKRKGNNILCC 1426
Query: 204 DYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRL--HLMLAATTRLGVAGIGLYRVSGGI 377
DYS FDG+ + ++ ++ I N+ S+R HL++A +R + +++V GI
Sbjct: 1427 DYSSFDGLLSKQVMKAMSDMINNFCGGNESSKRKREHLLMACCSRYAICKNTVWKVECGI 1486
Query: 378 PSGFALTVIVNSLVNHFLVRWSWEHMMAS------TSLFFSDCVELAVVGDDNLVSVKEV 539
PSGF LTVI NS+ N L+R+S++ ++ S S+ F + V + V GDDNL+SV EV
Sbjct: 1487 PSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGDDNLLSVNEV 1546
Query: 540 AASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXX 719
F+ K+L FLA T+ DG DK L +F E CDFLKR FK RG + AP
Sbjct: 1547 IKPYFDGKRLKEFLATLHITITDGKDKTSPFL-QFRCLEDCDFLKRGFKNRGLYWDAPEE 1605
Query: 720 XXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKDLYCKWRRDLIDLCS 881
H+V N+ A + N+ LRELF + DK+ + RR + S
Sbjct: 1606 KESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMW-DKNECAELRRKALQRIS 1658
>gb|ACE06773.1| polyprotein [Radish mosaic virus]
Length = 1853
Score = 177 bits (448), Expect = 5e-46
Identities = 107/280 (38%), Positives = 155/280 (55%), Gaps = 8/280 (2%)
Frame = +3
Query: 24 YSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFNG 203
+SI + N LVR+ F +FV +M+ NV+P +VGINP G +WT L R+ KG N
Sbjct: 1367 FSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVGINPYGMEWTDLAMRLKRKGNNILCC 1426
Query: 204 DYSRFDGVTPRCLLIEIARRITLLYNDNQGSRRL--HLMLAATTRLGVAGIGLYRVSGGI 377
DYS FDG+ + ++ ++ I ++ S+R HL++A +R + +++V GI
Sbjct: 1427 DYSSFDGLLSKQVMKAMSDMINSFCGGSESSKRKREHLLMACCSRYAICKNSVWKVECGI 1486
Query: 378 PSGFALTVIVNSLVNHFLVRWSWEHMMAS------TSLFFSDCVELAVVGDDNLVSVKEV 539
PSGF LTVI NS+ N L+R+S++ ++ S S+ F + V + V GDDNL+SV EV
Sbjct: 1487 PSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEV 1546
Query: 540 AASDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGDRYLAPXX 719
F+ K+L FLA T+ DG DK L +F E CDFLKR FK RG + AP
Sbjct: 1547 IKPYFDGKRLKEFLATLRITITDGKDKTSPFL-QFRCLEDCDFLKRGFKNRGLYWDAPEE 1605
Query: 720 XXXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKD 839
H+V N+ A + N+ LRELF + K+
Sbjct: 1606 KESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMWDKKE 1645
>dbj|BAA34928.1| polyprotein [Broad bean wilt virus 2]
Length = 1870
Score = 176 bits (447), Expect = 7e-46
Identities = 108/279 (38%), Positives = 154/279 (55%), Gaps = 6/279 (2%)
Frame = +3
Query: 21 LYSIGSIVNNYLVRKYFGSFVAELMKLHNVIPTKVGINPLGYDWTILGKRMHAKGTNWFN 200
L+++ + N ++RK F +FV MK +V+P +VGINP +WT + ++ +KG N
Sbjct: 1390 LFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQVGINPYSREWTRMANKLLSKGNNILC 1449
Query: 201 GDYSRFDGVTPRCLLIEIARRITLLYNDNQGSRR--LHLMLAATTRLGVAGIGLYRVSGG 374
DYSRFDG P+C++ EI I L ++ SR +LMLA T+R + LYRV G
Sbjct: 1450 CDYSRFDGFLPKCIMNEIGNMIARLMKVDEVSRAQIKNLMLACTSRYAMCNRVLYRVENG 1509
Query: 375 IPSGFALTVIVNSLVNHFLVRWSWEHMM---ASTSLFFSDCVELAVVGDDNLVSVKEVAA 545
IPSGF LTVIVNS++N LV++++ H S F V + V GDDNL+SV + +
Sbjct: 1510 IPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAIS 1569
Query: 546 SDFNLKKLSAFLADFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCFKARGD-RYLAPXXX 722
S F+ L +F+ G + DG DK K + EF E CDFLKR FK D + +P
Sbjct: 1570 SKFDGSFLVSFMEGLGIKVTDGIDKTK-VGIEFRRLENCDFLKRSFKMSPDGTWRSPMSK 1628
Query: 723 XXXXXXXHWVRETNVSNAVATQNNVEGFLRELFHYGDKD 839
H+V+ + A A NN LREL+ + K+
Sbjct: 1629 ESLWPQLHFVKAKKLEMAEAYINNCNNILRELWLHDVKE 1667